TMEM14DP (transmembrane protein 14D, pseudogene) - Rat Genome Database

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Gene: TMEM14DP (transmembrane protein 14D, pseudogene) Homo sapiens
Analyze
No known orthologs.
Symbol: TMEM14DP
Name: transmembrane protein 14D, pseudogene
RGD ID: 1353543
HGNC Page HGNC:15660
Description: Predicted to be involved in regulation of heme biosynthetic process. Predicted to be located in membrane. Predicted to be active in mitochondrial membrane.
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: bA524O24.3; TMEM14D; transmembrane protein 14D
RGD Orthologs
Alliance Genes
More Info homologs ...
Related Functional Gene: TMEM14B  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381068,544,026 - 68,544,940 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1068,544,489 - 68,544,833 (-)EnsemblGRCh38hg38GRCh38
GRCh371070,303,783 - 70,304,697 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361069,974,252 - 69,974,596 (-)NCBINCBI36Build 36hg18NCBI36
Celera1063,579,224 - 63,580,144 (-)NCBICelera
Cytogenetic Map10q21.3NCBI
HuRef1064,305,364 - 64,306,284 (-)NCBIHuRef
CHM1_11070,585,828 - 70,586,748 (-)NCBICHM1_1
T2T-CHM13v2.01069,413,226 - 69,414,139 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
chloropicrin  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:21873635   PMID:31980649  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:58
Count of miRNA genes:58
Interacting mature miRNAs:58
Transcripts:ENST00000422205
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 190 222 328 58 172 52 557 209 243 92 242 456 14 146 311 1
Below cutoff 1155 1430 749 254 540 151 2260 1255 1936 169 684 707 106 638 1535 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000422205
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1068,544,489 - 68,544,833 (-)Ensembl
RefSeq Acc Id: XM_928242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
Build 361069,974,252 - 69,974,596 (-)NCBI Archive
Protein Sequences
GenBank Protein A8MWL7 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A8MWL7-F1-model_v2 AlphaFold A8MWL7 1-114 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:15660 AgrOrtholog
COSMIC TMEM14DP COSMIC
Ensembl Genes ENSG00000214881 Ensembl
Gene3D-CATH 1.10.10.1740 UniProtKB/Swiss-Prot
GTEx ENSG00000214881 GTEx
HGNC ID HGNC:15660 ENTREZGENE
Human Proteome Map TMEM14DP Human Proteome Map
InterPro TMEM14 UniProtKB/Swiss-Prot
  TMEM14_sf UniProtKB/Swiss-Prot
NCBI Gene 645203 ENTREZGENE
PANTHER PTHR12668 UniProtKB/Swiss-Prot
  TRANSMEMBRANE PROTEIN 14DP UniProtKB/Swiss-Prot
Pfam Tmemb_14 UniProtKB/Swiss-Prot
UniProt A8MWL7 ENTREZGENE, UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-09-29 TMEM14DP  transmembrane protein 14D, pseudogene  TMEM14D  transmembrane protein 14D (pseudogene)  Symbol and/or name change 5135510 APPROVED
2012-04-24 TMEM14D  transmembrane protein 14D (pseudogene)  TMEM14D  transmembrane protein 14D  Symbol and/or name change 5135510 APPROVED