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Gene: PAXBP1 (PAX3 and PAX7 binding protein 1) Homo sapiens
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Symbol: PAXBP1
Name: PAX3 and PAX7 binding protein 1
RGD ID: 1353290
Description: Predicted to have RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Localizes to cytosol.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: BM020; C21orf66; FLJ90561; FSAP105; functional spliceosome-associated protein 105; GC-rich sequence DNA-binding factor 1; GC-rich sequence DNA-binding factor candidate; GC-rich sequence DNA-binding factor homolog; GCFC; GCFC1; PAX3- and PAX7-binding protein 1
Orthologs:
Mus musculus (house mouse) : Paxbp1 (PAX3 and PAX7 binding protein 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Paxbp1 (PAX3 and PAX7 binding protein 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Paxbp1 (PAX3 and PAX7 binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Canis lupus familiaris (dog) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Paxbp1 (PAX3 and PAX7 binding protein 1)
Sus scrofa (pig) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Chlorocebus sabaeus (African green monkey) : PAXBP1 (PAX3 and PAX7 binding protein 1)
Heterocephalus glaber (naked mole-rat) : Paxbp1 (PAX3 and PAX7 binding protein 1)
more info ...
Related Pseudogenes: PAXBP1P1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2132,733,899 - 32,771,792 (-)EnsemblGRCh38hg38GRCh38
GRCh382132,733,899 - 32,771,835 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372134,106,210 - 34,144,169 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362133,028,081 - 33,066,040 (-)NCBINCBI36hg18NCBI36
Build 342133,029,001 - 33,065,869NCBI
Celera2119,289,868 - 19,327,826 (-)NCBI
Cytogenetic Map21q22.11NCBI
HuRef2119,515,579 - 19,553,535 (-)NCBIHuRef
CHM1_12133,667,852 - 33,705,826 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on PAXBP1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1353290
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2020-10-06
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.