Gene: ALDH7A1P1 (aldehyde dehydrogenase 7 family member A1 pseudogene 1) Homo sapiens |
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Analyze |
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Symbol: |
ALDH7A1P1 |
Name: |
aldehyde dehydrogenase 7 family member A1 pseudogene 1 |
RGD ID: |
1352783 |
HGNC Page |
HGNC:878 |
Description: |
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Type: |
pseudo (Ensembl: processed_pseudogene)
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RefSeq Status: |
INFERRED |
Previously known as: |
antiquitin-like 1; ATQL1 |
Related Functional Gene: |
ALDH7A1
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Latest Assembly: |
GRCh38 - Human Genome Assembly GRCh38 |
Position: |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 5 | 77,290,184 - 77,291,997 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 5 | 77,290,268 - 77,291,800 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 5 | 76,586,009 - 76,587,822 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 5 | 76,621,684 - 76,623,499 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 5 | 72,480,239 - 72,482,049 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q13.3 | NCBI | | | | | HuRef | 5 | 71,792,463 - 71,794,273 (+) | NCBI | | HuRef | | | CHM1_1 | 5 | 76,019,747 - 76,021,557 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 5 | 77,772,092 - 77,773,905 (+) | NCBI | | T2T-CHM13v2.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Additional References at PubMed
Genomics
miRNA Target Status
Predicted Target Of
Count of predictions: | 82 | Count of miRNA genes: | 80 | Interacting mature miRNAs: | 81 | Transcripts: | ENST00000510973 | Prediction methods: | Miranda, Rnahybrid | Result types: | miRGate_prediction | |
Markers in Region
D5S2464 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
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GRCh37 | 5 | 76,587,583 - 76,587,781 | UniSTS | GRCh37 | GRCh37 | 5 | 125,880,503 - 125,880,702 | UniSTS | GRCh37 | Build 36 | 5 | 125,908,402 - 125,908,601 | RGD | NCBI36 | Celera | 5 | 72,481,813 - 72,482,011 | RGD | | Cytogenetic Map | 5 | q14 | UniSTS | | Cytogenetic Map | 5 | q13.3 | UniSTS | | Cytogenetic Map | 5 | q31 | UniSTS | | HuRef | 5 | 121,071,206 - 121,071,405 | UniSTS | | HuRef | 5 | 71,794,037 - 71,794,235 | UniSTS | | GeneMap99-GB4 RH Map | 5 | 370.82 | UniSTS | | Whitehead-RH Map | 5 | 270.0 | UniSTS | | Whitehead-YAC Contig Map | 5 | | UniSTS | | NCBI RH Map | 5 | 363.9 | UniSTS | |
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RH47147 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
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GRCh37 | 5 | 76,587,455 - 76,587,556 | UniSTS | GRCh37 | Build 36 | 5 | 76,623,211 - 76,623,312 | RGD | NCBI36 | Celera | 5 | 72,481,685 - 72,481,786 | RGD | | Cytogenetic Map | 5 | q31 | UniSTS | | Cytogenetic Map | 5 | q13.3 | UniSTS | | Cytogenetic Map | 5 | q14 | UniSTS | | HuRef | 5 | 71,793,909 - 71,794,010 | UniSTS | | GeneMap99-GB4 RH Map | 5 | 371.12 | UniSTS | |
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D5S2596 |
Human Assembly | Chr | Position (strand) | Source | JBrowse |
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GRCh37 | 5 | 76,587,528 - 76,587,670 | UniSTS | GRCh37 | GRCh37 | 5 | 125,880,615 - 125,882,061 | UniSTS | GRCh37 | Build 36 | 5 | 76,623,284 - 76,623,426 | RGD | NCBI36 | Celera | 5 | 72,481,758 - 72,481,900 | RGD | | Cytogenetic Map | 5 | q31 | UniSTS | | Cytogenetic Map | 5 | q14 | UniSTS | | Cytogenetic Map | 5 | q13.3 | UniSTS | | HuRef | 5 | 71,793,982 - 71,794,124 | UniSTS | | HuRef | 5 | 121,071,318 - 121,072,780 | UniSTS | | Stanford-G3 RH Map | 5 | 2779.0 | UniSTS | | GeneMap99-G3 RH Map | 5 | 2774.0 | UniSTS | |
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Expression
RNA-SEQ Expression
High: > 1000 TPM value
Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM
Below Cutoff: < 0.5 TPM
Sequence
RefSeq Acc Id: |
ENST00000510973 |
Type: |
CODING |
Position: |
Human Assembly | Chr | Position (strand) | Source |
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GRCh38.p14 Ensembl | 5 | 77,290,268 - 77,291,800 (+) | Ensembl |
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Additional Information
Nomenclature History
Date |
Current Symbol |
Current Name |
Previous Symbol |
Previous Name |
Description |
Reference |
Status |
2015-11-24 |
ALDH7A1P1 |
aldehyde dehydrogenase 7 family member A1 pseudogene 1 |
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aldehyde dehydrogenase 7 family, member A1 pseudogene 1 |
Symbol and/or name change |
5135510 |
APPROVED |
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