AIMP1P1 (aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1) - Rat Genome Database

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Gene: AIMP1P1 (aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1) Homo sapiens
Analyze
Symbol: AIMP1P1
Name: aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1
RGD ID: 1352273
HGNC Page HGNC:16543
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 pseudogene 1; bA400P21.1; SCYE1P
Related Functional Gene: AIMP1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382014,127,396 - 14,128,413 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2014,127,400 - 14,128,336 (+)EnsemblGRCh38hg38GRCh38
GRCh372014,108,042 - 14,109,059 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362014,055,976 - 14,057,087 (+)NCBINCBI36Build 36hg18NCBI36
Celera2014,183,350 - 14,184,432 (+)NCBICelera
Cytogenetic Map20p12.1NCBI
HuRef2014,068,126 - 14,069,208 (+)NCBIHuRef
CHM1_12014,107,973 - 14,109,055 (+)NCBICHM1_1
T2T-CHM13v2.02014,176,652 - 14,177,669 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:20677014  


Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:44
Count of miRNA genes:42
Interacting mature miRNAs:43
Transcripts:ENST00000418670
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 2 1 5 20 5 19 2 10 4 13
Below cutoff 280 253 315 105 60 92 858 224 1259 54 424 188 15 96 529 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000418670
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2014,127,400 - 14,128,336 (+)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC AIMP1P1 COSMIC
Ensembl Genes ENSG00000234187 Ensembl, ENTREZGENE
GTEx ENSG00000234187 GTEx
HGNC ID HGNC:16543 ENTREZGENE
Human Proteome Map AIMP1P1 Human Proteome Map
NCBI Gene 170547 ENTREZGENE
PharmGKB PA38160 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-17 AIMP1P1  aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1    aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 pseudogene 1  Symbol and/or name change 5135510 APPROVED
2012-02-07 AIMP1P1  aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 pseudogene 1  SCYE1P  small inducible cytokine subfamily E, member 1 (endothelial monocyte-activating) pseudogene  Symbol and/or name change 5135510 APPROVED