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Gene: HOXA6 (homeobox A6) Homo sapiens
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Symbol: HOXA6
Name: homeobox A6
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II distal enhancer sequence-specific DNA binding activity. Predicted to be involved in anterior/posterior pattern specification. Localizes to the nuclear speck.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: homeo box 1B; homeo box A6; homeobox protein Hox-1B; homeobox protein Hox-A6; homeobox protein HOXA6; HOX1; HOX1.2; HOX1B
Orthologs:
Mus musculus (house mouse) : Hoxa6 (homeobox A6)  MGI  Alliance
Rattus norvegicus (Norway rat) : Hoxa6 (homeobox A6)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa6 (homeobox A6)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA6 (homeobox A6)
Canis lupus familiaris (dog) : HOXA6 (homeobox A6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa6 (homeobox A6)
Sus scrofa (pig) : HOXA6 (homeobox A6)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl727,145,396 - 27,150,603 (-)Ensembl
GRCh38727,145,396 - 27,147,774 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37727,185,202 - 27,187,393 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36727,151,641 - 27,153,893 (-)NCBINCBI36hg18NCBI36
Build 34726,958,355 - 26,960,608NCBI
Celera727,174,050 - 27,176,302 (-)NCBI
Cytogenetic Map7p15.2NCBI
HuRef727,065,590 - 27,067,779 (-)NCBIHuRef
CHM1_1727,184,908 - 27,187,099 (-)NCBICHM1_1
CRA_TCAGchr7v2727,236,351 - 27,238,542 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on HOXA6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1352106
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.