C22orf23 (chromosome 22 open reading frame 23) - Rat Genome Database

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Gene: C22orf23 (chromosome 22 open reading frame 23) Homo sapiens
Analyze
Symbol: C22orf23
Name: chromosome 22 open reading frame 23
RGD ID: 1351784
HGNC Page HGNC:18589
Description: ASSOCIATED WITH adenylosuccinase lyase deficiency; Emery-Dreifuss muscular dystrophy; myoclonic dystonia 26; INTERACTS WITH aristolochic acid A; benzo[a]pyrene; camptothecin
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: dJ1039K5.6; EVG1; FLJ32787; hypothetical protein LOC84645; UPF0193 protein EVG1
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382237,943,050 - 37,953,669 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2237,943,050 - 37,953,669 (-)EnsemblGRCh38hg38GRCh38
GRCh372238,339,057 - 38,349,676 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362236,669,479 - 36,679,551 (-)NCBINCBI36Build 36hg18NCBI36
Build 342236,664,032 - 36,674,103NCBI
Celera2222,141,251 - 22,151,322 (-)NCBICelera
Cytogenetic Map22q13.1NCBI
HuRef2221,305,236 - 21,315,755 (-)NCBIHuRef
CHM1_12238,297,824 - 38,308,432 (-)NCBICHM1_1
T2T-CHM13v2.02238,404,677 - 38,415,276 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11237012   PMID:12477932   PMID:14702039   PMID:15342556   PMID:15461802   PMID:15489334   PMID:16344560   PMID:25416956   PMID:26186194   PMID:28514442   PMID:31515488   PMID:32296183  
PMID:33961781  


Genomics

Comparative Map Data
C22orf23
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382237,943,050 - 37,953,669 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2237,943,050 - 37,953,669 (-)EnsemblGRCh38hg38GRCh38
GRCh372238,339,057 - 38,349,676 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362236,669,479 - 36,679,551 (-)NCBINCBI36Build 36hg18NCBI36
Build 342236,664,032 - 36,674,103NCBI
Celera2222,141,251 - 22,151,322 (-)NCBICelera
Cytogenetic Map22q13.1NCBI
HuRef2221,305,236 - 21,315,755 (-)NCBIHuRef
CHM1_12238,297,824 - 38,308,432 (-)NCBICHM1_1
T2T-CHM13v2.02238,404,677 - 38,415,276 (-)NCBIT2T-CHM13v2.0
1700088E04Rik
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391579,018,855 - 79,025,451 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1579,013,549 - 79,025,453 (-)EnsemblGRCm39 Ensembl
GRCm381579,134,655 - 79,141,251 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1579,129,349 - 79,141,253 (-)EnsemblGRCm38mm10GRCm38
MGSCv371578,965,085 - 78,971,681 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361578,961,910 - 78,968,506 (-)NCBIMGSCv36mm8
Celera1581,247,373 - 81,253,965 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1537.7NCBI
C7h22orf23
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87112,585,341 - 112,592,938 (-)NCBIGRCr8
mRatBN7.27110,704,894 - 110,712,485 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7110,704,894 - 110,712,487 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7112,453,522 - 112,461,138 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07114,677,053 - 114,684,666 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07114,646,367 - 114,653,964 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07120,372,874 - 120,380,465 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7120,373,352 - 120,380,200 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07120,366,953 - 120,374,280 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47117,115,146 - 117,122,727 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17117,149,376 - 117,156,957 (-)NCBI
Celera7107,039,386 - 107,046,967 (-)NCBICelera
Cytogenetic Map7q34NCBI
CUNH22orf23
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495541324,291,712 - 24,300,294 (-)NCBIChiLan1.0ChiLan1.0
C23H22orf23
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22347,786,408 - 47,812,178 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12250,477,554 - 50,500,557 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02218,846,688 - 18,868,886 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12236,685,710 - 36,695,308 (-)NCBIpanpan1.1PanPan1.1panPan2
C10H22orf23
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11026,707,503 - 26,714,808 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1026,707,506 - 26,714,823 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1026,662,446 - 26,669,748 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01027,499,234 - 27,506,538 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1027,499,249 - 27,506,553 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11027,219,075 - 27,229,546 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01027,530,571 - 27,541,174 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01027,707,968 - 27,715,273 (+)NCBIUU_Cfam_GSD_1.0
CUNH22orf23
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494510,186,367 - 10,192,184 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049364923,196,828 - 3,202,593 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C5H22orf23
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl59,917,781 - 9,924,662 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.159,917,786 - 9,924,664 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.257,316,057 - 7,322,964 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH22orf23
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11920,646,735 - 20,654,434 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1920,647,178 - 20,653,937 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045105,122,031 - 105,133,805 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
CUNH22orf23
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247529,988,497 - 9,998,734 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247529,988,157 - 9,996,133 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in C22orf23
1 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 22q12.3-13.1(chr22:35333993-38900177)x1 copy number loss See cases [RCV000051364] Chr22:35333993..38900177 [GRCh38]
Chr22:35729986..39296182 [GRCh37]
Chr22:34059986..37626128 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:36859030-39236985)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051366]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051366]|See cases [RCV000051366] Chr22:36859030..39236985 [GRCh38]
Chr22:37255072..39632990 [GRCh37]
Chr22:35585018..37962936 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q13.1(chr22:37721777-38886664)x1 copy number loss See cases [RCV000051367] Chr22:37721777..38886664 [GRCh38]
Chr22:38117784..39282669 [GRCh37]
Chr22:36447730..37612615 [NCBI36]
Chr22:22q13.1		 pathogenic
GRCh38/hg38 22q12.3-13.33(chr22:33768441-50739977)x3 copy number gain See cases [RCV000051682] Chr22:33768441..50739977 [GRCh38]
Chr22:34164428..51178405 [GRCh37]
Chr22:32494428..49525271 [NCBI36]
Chr22:22q12.3-13.33		 pathogenic
GRCh38/hg38 22q12.3-13.1(chr22:36068124-38002382)x3 copy number gain See cases [RCV000051683] Chr22:36068124..38002382 [GRCh38]
Chr22:36464172..38398389 [GRCh37]
Chr22:34794118..36728335 [NCBI36]
Chr22:22q12.3-13.1		 pathogenic
GRCh38/hg38 22q12.3-13.33(chr22:37061769-50738932)x3 copy number gain See cases [RCV000051684] Chr22:37061769..50738932 [GRCh38]
Chr22:37457809..51177360 [GRCh37]
Chr22:35787755..49524226 [NCBI36]
Chr22:22q12.3-13.33		 pathogenic
GRCh38/hg38 22q13.1-13.2(chr22:37721797-40860953)x3 copy number gain See cases [RCV000051685] Chr22:37721797..40860953 [GRCh38]
Chr22:38117804..41256957 [GRCh37]
Chr22:36447750..39586903 [NCBI36]
Chr22:22q13.1-13.2		 pathogenic
GRCh38/hg38 22q11.1-13.33(chr22:16916608-50739836)x3 copy number gain See cases [RCV000133646] Chr22:16916608..50739836 [GRCh38]
Chr22:17397498..51178264 [GRCh37]
Chr22:15777498..49525130 [NCBI36]
Chr22:22q11.1-13.33		 pathogenic
GRCh38/hg38 22q11.1-13.33(chr22:16916743-50739785)x3 copy number gain See cases [RCV000134730] Chr22:16916743..50739785 [GRCh38]
Chr22:17397633..51178213 [GRCh37]
Chr22:15777633..49525079 [NCBI36]
Chr22:22q11.1-13.33		 pathogenic
GRCh38/hg38 22q13.1(chr22:37447222-39103680)x1 copy number loss See cases [RCV000141783] Chr22:37447222..39103680 [GRCh38]
Chr22:37843259..39499685 [GRCh37]
Chr22:36173205..37829631 [NCBI36]
Chr22:22q13.1		 pathogenic
GRCh37/hg19 22q12.3-13.1(chr22:37090025-39601950)x3 copy number gain See cases [RCV000446037] Chr22:37090025..39601950 [GRCh37]
Chr22:22q12.3-13.1		 uncertain significance
GRCh37/hg19 22q13.1(chr22:38337934-38343443)x3 copy number gain See cases [RCV000446043] Chr22:38337934..38343443 [GRCh37]
Chr22:22q13.1		 uncertain significance
GRCh38/hg38 22q13.1(chr22:37805546-37983784)x1 copy number loss Waardenburg syndrome type 4C [RCV000721944] Chr22:37805546..37983784 [GRCh38]
Chr22:38201553..38379791 [GRCh37]
Chr22:22q13.1		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16054691-51237518)x3 copy number gain See cases [RCV000240091] Chr22:16054691..51237518 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q12.3-13.33(chr22:35728929-51220961)x3 copy number gain See cases [RCV000240469] Chr22:35728929..51220961 [GRCh37]
Chr22:22q12.3-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16054691-51220902)x3 copy number gain See cases [RCV000446956] Chr22:16054691..51220902 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q13.1(chr22:38322968-38965458) copy number gain See cases [RCV000447478] Chr22:38322968..38965458 [GRCh37]
Chr22:22q13.1		 likely pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16054691-51237463)x3 copy number gain See cases [RCV000448847] Chr22:16054691..51237463 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q13.1(chr22:37866631-39054815)x1 copy number loss See cases [RCV000511673] Chr22:37866631..39054815 [GRCh37]
Chr22:22q13.1		 pathogenic
GRCh37/hg19 22q12.3-13.1(chr22:36877226-38548989)x1 copy number loss See cases [RCV000512008] Chr22:36877226..38548989 [GRCh37]
Chr22:22q12.3-13.1		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16888900-51197838) copy number gain See cases [RCV000510873] Chr22:16888900..51197838 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16888900-51197838)x3 copy number gain See cases [RCV000512333] Chr22:16888900..51197838 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q12.3-13.1(chr22:35674826-39466442)x3 copy number gain See cases [RCV000512385] Chr22:35674826..39466442 [GRCh37]
Chr22:22q12.3-13.1		 likely pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16054667-51243435)x3 copy number gain not provided [RCV000741689] Chr22:16054667..51243435 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16114244-51195728)x3 copy number gain not provided [RCV000741691] Chr22:16114244..51195728 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16114244-51211392)x3 copy number gain not provided [RCV000741692] Chr22:16114244..51211392 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q12.2-13.33(chr22:30654764-51197838)x3 copy number gain not provided [RCV001007181] Chr22:30654764..51197838 [GRCh37]
Chr22:22q12.2-13.33		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16888899-51197838)x3 copy number gain not provided [RCV000846344] Chr22:16888899..51197838 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
NC_000022.10:g.(?_37154355)_(39148633_?)del deletion Emery-Dreifuss muscular dystrophy [RCV003122557]|Infantile neuroaxonal dystrophy [RCV003122556]|Myoclonic dystonia 26 [RCV003107333] Chr22:37154355..39148633 [GRCh37]
Chr22:22q12.3-13.1		 pathogenic|uncertain significance
GRCh37/hg19 22q13.1(chr22:38002218-38973070)x1 copy number loss not provided [RCV001007501] Chr22:38002218..38973070 [GRCh37]
Chr22:22q13.1		 pathogenic
GRCh37/hg19 22q11.1-13.33(chr22:16197005-51224252)x3 copy number gain See cases [RCV001263056] Chr22:16197005..51224252 [GRCh37]
Chr22:22q11.1-13.33		 pathogenic
GRCh37/hg19 22q13.1(chr22:38155164-38541997) copy number loss Waardenburg syndrome type 2E [RCV001290182] Chr22:38155164..38541997 [GRCh37]
Chr22:22q13.1		 pathogenic
GRCh37/hg19 22q13.1(chr22:38116341-38369048) copy number loss not specified [RCV002052755] Chr22:38116341..38369048 [GRCh37]
Chr22:22q13.1		 likely pathogenic
NC_000022.10:g.(?_35776672)_(42486826_?)dup duplication Adenylosuccinate lyase deficiency [RCV003119093] Chr22:35776672..42486826 [GRCh37]
Chr22:22q12.3-13.2		 uncertain significance
NC_000022.10:g.(?_38097373)_(39306081_?)del deletion not provided [RCV003122369] Chr22:38097373..39306081 [GRCh37]
Chr22:22q13.1		 pathogenic
NM_032561.5(C22orf23):c.316T>A (p.Tyr106Asn) single nucleotide variant not specified [RCV004215286] Chr22:37947314 [GRCh38]
Chr22:38343321 [GRCh37]
Chr22:22q13.1		 uncertain significance
NM_032561.5(C22orf23):c.129G>A (p.Thr43=) single nucleotide variant EBV-positive nodal T- and NK-cell lymphoma [RCV004558086] Chr22:37951497 [GRCh38]
Chr22:38347504 [GRCh37]
Chr22:22q13.1		 likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1495
Count of miRNA genes:736
Interacting mature miRNAs:871
Transcripts:ENST00000249079, ENST00000403026, ENST00000403305, ENST00000418863, ENST00000422191
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH92562  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372238,339,611 - 38,339,783UniSTSGRCh37
Build 362236,669,557 - 36,669,729RGDNCBI36
Celera2222,141,329 - 22,141,501RGD
Cytogenetic Map22q13.1UniSTS
HuRef2221,305,790 - 21,305,962UniSTS
GeneMap99-GB4 RH Map22127.26UniSTS
RH93282  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372238,344,802 - 38,344,983UniSTSGRCh37
Build 362236,674,748 - 36,674,929RGDNCBI36
Celera2222,146,519 - 22,146,700RGD
Cytogenetic Map22q13.1UniSTS
HuRef2221,310,980 - 21,311,161UniSTS
GeneMap99-GB4 RH Map22115.02UniSTS
RH103192  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372238,347,436 - 38,347,555UniSTSGRCh37
Build 362236,677,382 - 36,677,501RGDNCBI36
Celera2222,149,151 - 22,149,270RGD
Cytogenetic Map22q13.1UniSTS
HuRef2221,313,510 - 21,313,629UniSTS
GeneMap99-GB4 RH Map22115.02UniSTS
RH46410  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372238,340,883 - 38,341,043UniSTSGRCh37
Build 362236,670,829 - 36,670,989RGDNCBI36
Celera2222,142,601 - 22,142,761RGD
Cytogenetic Map22q13.1UniSTS
HuRef2221,307,062 - 21,307,222UniSTS
GeneMap99-GB4 RH Map22126.74UniSTS
NCBI RH Map22154.0UniSTS
SHGC-57930  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372238,342,908 - 38,342,999UniSTSGRCh37
Build 362236,672,854 - 36,672,945RGDNCBI36
Celera2222,144,626 - 22,144,717RGD
Cytogenetic Map22q13.1UniSTS
HuRef2221,309,087 - 21,309,178UniSTS
TNG Radiation Hybrid Map228935.0UniSTS
RH68010  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372238,347,430 - 38,347,523UniSTSGRCh37
Build 362236,677,376 - 36,677,469RGDNCBI36
Celera2222,149,145 - 22,149,238RGD
Cytogenetic Map22q13.1UniSTS
HuRef2221,313,504 - 21,313,597UniSTS
GeneMap99-GB4 RH Map22114.07UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1404 122 462 28 99 7 1054 587 547 72 837 402 22 7 667
Low 987 2292 1113 451 1113 312 3280 1554 3171 335 604 1180 150 1 1193 2113 4 1
Below cutoff 38 442 136 131 579 133 22 52 14 12 16 31 1 4 8 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001207062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_032561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005261781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005261782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005261783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005261784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047441550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054326032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054326033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054326034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054326035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054326036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF324466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL031587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI463610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI827388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP368870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR456440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA968042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000249079   ⟹   ENSP00000249079
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,943,526 - 37,953,596 (-)Ensembl
Ensembl Acc Id: ENST00000403026   ⟹   ENSP00000384618
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,944,125 - 37,953,669 (-)Ensembl
Ensembl Acc Id: ENST00000403305   ⟹   ENSP00000384667
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,943,050 - 37,953,601 (-)Ensembl
Ensembl Acc Id: ENST00000418863   ⟹   ENSP00000395077
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,944,513 - 37,953,601 (-)Ensembl
Ensembl Acc Id: ENST00000422191   ⟹   ENSP00000407707
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,945,161 - 37,953,545 (-)Ensembl
Ensembl Acc Id: ENST00000619227   ⟹   ENSP00000483445
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2237,943,050 - 37,953,669 (-)Ensembl
RefSeq Acc Id: NM_001207062   ⟹   NP_001193991
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,943,050 - 37,953,669 (-)NCBI
GRCh372238,339,057 - 38,349,676 (-)NCBI
HuRef2221,305,236 - 21,315,755 (-)ENTREZGENE
CHM1_12238,297,824 - 38,308,432 (-)NCBI
T2T-CHM13v2.02238,404,677 - 38,415,276 (-)NCBI
Sequence:
RefSeq Acc Id: NM_032561   ⟹   NP_115950
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,943,050 - 37,953,601 (-)NCBI
GRCh372238,339,057 - 38,349,676 (-)ENTREZGENE
GRCh372238,339,057 - 38,349,676 (-)NCBI
Build 362236,669,479 - 36,679,551 (-)NCBI Archive
Celera2222,141,251 - 22,151,322 (-)RGD
HuRef2221,305,236 - 21,315,755 (-)ENTREZGENE
CHM1_12238,297,824 - 38,308,410 (-)NCBI
T2T-CHM13v2.02238,404,677 - 38,415,208 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005261781   ⟹   XP_005261838
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,943,729 - 37,953,601 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005261782   ⟹   XP_005261839
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,943,729 - 37,953,669 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005261783   ⟹   XP_005261840
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,943,729 - 37,953,601 (-)NCBI
GRCh372238,339,057 - 38,349,676 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005261784   ⟹   XP_005261841
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,943,050 - 37,953,601 (-)NCBI
GRCh372238,339,057 - 38,349,676 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047441550   ⟹   XP_047297506
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,943,050 - 37,953,669 (-)NCBI
RefSeq Acc Id: XM_054326032   ⟹   XP_054182007
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02238,405,356 - 38,415,208 (-)NCBI
RefSeq Acc Id: XM_054326033   ⟹   XP_054182008
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02238,405,356 - 38,415,276 (-)NCBI
RefSeq Acc Id: XM_054326034   ⟹   XP_054182009
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02238,404,677 - 38,415,276 (-)NCBI
RefSeq Acc Id: XM_054326035   ⟹   XP_054182010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02238,405,356 - 38,415,208 (-)NCBI
RefSeq Acc Id: XM_054326036   ⟹   XP_054182011
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02238,404,677 - 38,415,208 (-)NCBI
RefSeq Acc Id: NP_115950   ⟸   NM_032561
- Peptide Label: isoform 1
- UniProtKB: Q5JYU9 (UniProtKB/Swiss-Prot),   Q96M68 (UniProtKB/Swiss-Prot),   Q9BZE7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001193991   ⟸   NM_001207062
- Peptide Label: isoform 2
- UniProtKB: A0A087X0J6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005261839   ⟸   XM_005261782
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005261838   ⟸   XM_005261781
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005261841   ⟸   XM_005261784
- Peptide Label: isoform X4
- UniProtKB: A0A087X0J6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005261840   ⟸   XM_005261783
- Peptide Label: isoform X3
- Sequence:
Ensembl Acc Id: ENSP00000384667   ⟸   ENST00000403305
Ensembl Acc Id: ENSP00000384618   ⟸   ENST00000403026
Ensembl Acc Id: ENSP00000395077   ⟸   ENST00000418863
Ensembl Acc Id: ENSP00000249079   ⟸   ENST00000249079
Ensembl Acc Id: ENSP00000483445   ⟸   ENST00000619227
Ensembl Acc Id: ENSP00000407707   ⟸   ENST00000422191
RefSeq Acc Id: XP_047297506   ⟸   XM_047441550
- Peptide Label: isoform X2
- UniProtKB: Q9BZE7 (UniProtKB/Swiss-Prot),   Q5JYU9 (UniProtKB/Swiss-Prot),   Q96M68 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054182009   ⟸   XM_054326034
- Peptide Label: isoform X2
- UniProtKB: Q9BZE7 (UniProtKB/Swiss-Prot),   Q5JYU9 (UniProtKB/Swiss-Prot),   Q96M68 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054182011   ⟸   XM_054326036
- Peptide Label: isoform X4
- UniProtKB: A0A087X0J6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054182008   ⟸   XM_054326033
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054182010   ⟸   XM_054326035
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054182007   ⟸   XM_054326032
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9BZE7-F1-model_v2 AlphaFold Q9BZE7 1-217 view protein structure

Promoters
RGD ID:6799903
Promoter ID:HG_KWN:42755
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_2Hour
Transcripts:ENST00000249079,   ENST00000396889,   ENST00000403026,   ENST00000403305,   OTTHUMT00000319565,   OTTHUMT00000319566
Position:
Human AssemblyChrPosition (strand)Source
Build 362236,679,301 - 36,679,801 (-)MPROMDB
RGD ID:13604022
Promoter ID:EPDNEW_H28195
Type:initiation region
Name:C22orf23_1
Description:chromosome 22 open reading frame 23
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382237,953,599 - 37,953,659EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:18589 AgrOrtholog
COSMIC C22orf23 COSMIC
Ensembl Genes ENSG00000128346 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000249079.6 UniProtKB/Swiss-Prot
  ENST00000403026 ENTREZGENE
  ENST00000403026.5 UniProtKB/Swiss-Prot
  ENST00000403305 ENTREZGENE
  ENST00000403305.6 UniProtKB/Swiss-Prot
  ENST00000418863.5 UniProtKB/TrEMBL
  ENST00000422191.1 UniProtKB/TrEMBL
  ENST00000619227 ENTREZGENE
  ENST00000619227.4 UniProtKB/TrEMBL
GTEx ENSG00000128346 GTEx
HGNC ID HGNC:18589 ENTREZGENE
Human Proteome Map C22orf23 Human Proteome Map
InterPro UPF0193 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:84645 UniProtKB/Swiss-Prot
NCBI Gene 84645 ENTREZGENE
OMIM 619678 OMIM
PANTHER PTHR28348 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPF0193 PROTEIN EVG1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam UPF0193 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA38355 PharmGKB
UniProt A0A087X0J6 ENTREZGENE, UniProtKB/TrEMBL
  B0QYM1_HUMAN UniProtKB/TrEMBL
  B0QYM2_HUMAN UniProtKB/TrEMBL
  EVG1_HUMAN UniProtKB/Swiss-Prot
  Q5JYU9 ENTREZGENE
  Q96M68 ENTREZGENE
  Q9BZE7 ENTREZGENE
UniProt Secondary Q5JYU9 UniProtKB/Swiss-Prot
  Q96M68 UniProtKB/Swiss-Prot