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Gene: VAX1 (ventral anterior homeobox 1) Homo sapiens
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Symbol: VAX1
Name: ventral anterior homeobox 1
Description: Predicted to have DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding activity; and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Predicted to be involved in central nervous system development; neuron differentiation; and regulation of transcription by RNA polymerase II. Predicted to localize to the nuclear chromatin. Implicated in microphthalmia.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: MCOPS11; MGC126743; MGC126745
Orthologs:
Mus musculus (house mouse) : Vax1 (ventral anterior homeobox 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Vax1 (ventral anterior homeobox 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vax1 (ventral anterior homeobox 1)
Pan paniscus (bonobo/pygmy chimpanzee) : VAX1 (ventral anterior homeobox 1)
Canis lupus familiaris (dog) : VAX1 (ventral anterior homeobox 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vax1 (ventral anterior homeobox 1)
Sus scrofa (pig) : VAX1 (ventral anterior homeobox 1)
Chlorocebus sabaeus (African green monkey) : VAX1 (ventral anterior homeobox 1)
Heterocephalus glaber (naked mole-rat) : Vax1 (ventral anterior homeobox 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl10117,128,521 - 117,138,301 (-)Ensembl
GRCh3810117,128,520 - 117,138,270 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3710118,888,032 - 118,897,812 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610118,878,022 - 118,887,802 (-)NCBINCBI36hg18NCBI36
Celera10112,617,376 - 112,627,160 (-)NCBI
Cytogenetic Map10q25.3NCBI
HuRef10112,516,187 - 112,526,080 (-)NCBIHuRef
CHM1_110119,172,341 - 119,182,118 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on VAX1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1351722
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.