FKBP1AP1 (FKBP prolyl isomerase 1A pseudogene 1) - Rat Genome Database

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Gene: FKBP1AP1 (FKBP prolyl isomerase 1A pseudogene 1) Homo sapiens
Analyze
Symbol: FKBP1AP1
Name: FKBP prolyl isomerase 1A pseudogene 1
RGD ID: 1351709
HGNC Page HGNC:3714
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: FK506 binding protein 1A pseudogene 1; FKBP12; FKBP1P1
Related Functional Gene: FKBP1A  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381957,825,280 - 57,827,462 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1957,826,461 - 57,826,778 (-)EnsemblGRCh38hg38GRCh38
GRCh371958,336,648 - 58,338,830 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361963,029,641 - 63,029,958 (-)NCBINCBI36Build 36hg18NCBI36
Celera1955,380,138 - 55,382,320 (-)NCBICelera
Cytogenetic Map19q13.43NCBI
HuRef1954,648,343 - 54,650,498 (-)NCBIHuRef
CHM1_11958,330,512 - 58,332,694 (-)NCBICHM1_1
T2T-CHM13v2.01960,922,196 - 60,924,379 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:1716149  


Genomics

Markers in Region
RH35863  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371958,338,099 - 58,338,249UniSTSGRCh37
Build 361963,029,911 - 63,030,061RGDNCBI36
Celera1955,381,589 - 55,381,739RGD
Cytogenetic Map19q13.43UniSTS
HuRef1954,649,794 - 54,649,944UniSTS
GeneMap99-GB4 RH Map19289.46UniSTS
NCBI RH Map19600.5UniSTS
RH68934  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37201,350,427 - 1,350,639UniSTSGRCh37
GRCh371958,337,502 - 58,337,715UniSTSGRCh37
Build 361963,029,314 - 63,029,527RGDNCBI36
Celera1955,380,992 - 55,381,205UniSTS
Celera662,081,369 - 62,081,578RGD
Celera201,446,772 - 1,446,984UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map6q12UniSTS
Cytogenetic Map19q13.43UniSTS
HuRef661,101,823 - 61,102,032UniSTS
HuRef1954,649,197 - 54,649,410UniSTS
HuRef201,302,915 - 1,303,127UniSTS
SHGC-32807  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371958,337,861 - 58,337,986UniSTSGRCh37
GRCh37663,921,631 - 63,921,756UniSTSGRCh37
Build 36663,979,590 - 63,979,715RGDNCBI36
Celera662,081,098 - 62,081,223UniSTS
Celera3147,593,545 - 147,593,682RGD
Celera1955,381,351 - 55,381,476UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map6q12UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
HuRef661,101,552 - 61,101,677UniSTS
HuRef1954,649,556 - 54,649,681UniSTS
TNG Radiation Hybrid Map629724.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 30
Low 120 101 154 37 520 29 253 41 299 49 437 217 8 47 120 1
Below cutoff 997 1045 796 220 577 135 1566 763 1442 141 476 736 90 512 906

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000594588
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1957,826,461 - 57,826,778 (-)Ensembl
RefSeq Acc Id: NR_024162
RefSeq Status: INFERRED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381957,825,280 - 57,827,462 (-)NCBI
GRCh371958,336,648 - 58,338,830 (-)RGD
Celera1955,380,138 - 55,382,320 (-)RGD
HuRef1954,648,343 - 54,650,498 (-)ENTREZGENE
CHM1_11958,330,512 - 58,332,694 (-)NCBI
T2T-CHM13v2.01960,922,196 - 60,924,379 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
COSMIC FKBP1AP1 COSMIC
Ensembl Genes ENSG00000269304 Ensembl
GTEx ENSG00000269304 GTEx
HGNC ID HGNC:3714 ENTREZGENE
Human Proteome Map FKBP1AP1 Human Proteome Map
NCBI Gene 2282 ENTREZGENE
PharmGKB PA28155 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-11-06 FKBP1AP1  FKBP prolyl isomerase 1A pseudogene 1    FK506 binding protein 1A pseudogene 1  Symbol and/or name change 5135510 APPROVED
2015-11-17 FKBP1AP1  FK506 binding protein 1A pseudogene 1    FK506 binding protein 1A, 12kDa pseudogene 1  Symbol and/or name change 5135510 APPROVED
2011-07-27 FKBP1AP1  FK506 binding protein 1A, 12kDa pseudogene 1  FKBP1P1  FK506 binding protein 1 pseudogene 1  Symbol and/or name change 5135510 APPROVED