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Gene: COL4A5 (collagen type IV alpha 5 chain) Homo sapiens
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Symbol: COL4A5
Name: collagen type IV alpha 5 chain
Description: This gene encodes one of the six subunits of type IV collagen, the major structural component of basement membranes. Mutations in this gene are associated with X-linked Alport syndrome, also known as hereditary nephritis. Like the other members of the type IV collagen gene family, this gene is organized in a head-to-head conformation with another type IV collagen gene so that each gene pair shares a common promoter. Alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, Aug 2010]
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: ASLN; ATS; ATS1; CA54; collagen alpha-5(IV) chain; collagen IV, alpha-5 polypeptide; collagen of basement membrane, alpha-5 chain; collagen type IV alpha 5; collagen, type IV, alpha 5; dA149D17.3; dA24A23.1; DKFZp686G1497; MGC167109; MGC42377
Orthologs:
Mus musculus (house mouse) : Col4a5 (collagen, type IV, alpha 5)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col4a5 (collagen type IV alpha 5 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col4a5 (collagen type IV alpha 5 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL4A5 (collagen type IV alpha 5 chain)
Canis lupus familiaris (dog) : COL4A5 (collagen type IV alpha 5 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col4a5 (collagen type IV alpha 5 chain)
Sus scrofa (pig) : COL4A5 (collagen type IV alpha 5 chain)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X108,439,838 - 108,697,545 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X107,683,019 - 107,940,775 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X107,569,810 - 107,827,431 (+)NCBINCBI36hg18NCBI36
Build 34X107,489,298 - 107,746,920NCBI
CeleraX108,154,585 - 108,412,194 (+)NCBI
Cytogenetic MapXq22.3NCBI
HuRefX97,304,982 - 97,564,656 (+)NCBIHuRef
CHM1_1X107,593,900 - 107,851,643 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Sequence

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