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Gene: SEPTIN5 (septin 5) Homo sapiens
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Symbol: SEPTIN5
Name: septin 5
Description: This locus represents naturally occurring read-through transcription between the neighboring SEPT5 (septin 5) and GP1BB (glycoprotein Ib (platelet), beta polypeptide) genes on chromosome 22. This read-through transcription arises from inefficient use of an imperfect polyA signal in the upstream SEPT5 gene, whereby transcription continues into the GP1BB gene. Alternative splicing results in multiple read-through variants. The read-through transcripts are candidates for nonsense-mediated mRNA decay (NMD), and are therefore unlikely to produce protein products. [provided by RefSeq, Dec 2010]
Type: ncrna
RefSeq Status: VALIDATED
Also known as: CDCREL; CDCREL-1; CDCREL1; cell division control related protein 1; cell division control-related protein 1; GP1BB; GPIb-beta; GPIbB; H5; HCDCREL-1; peanut-like 1; peanut-like protein 1; platelet glycoprotein Ib beta chain; PNUTL1; SEPT5; septin-5
Orthologs:
Chinchilla lanigera (long-tailed chinchilla) : Septin5 (septin 5)
Pan paniscus (bonobo/pygmy chimpanzee) : SEPTIN5 (septin 5)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Septin5 (septin 5)
Sus scrofa (pig) : SEPTIN5 (septin 5)
Chlorocebus sabaeus (African green monkey) : SEPTIN5 (septin 5)
Heterocephalus glaber (naked mole-rat) : Septin5 (septin 5)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl2219,717,220 - 19,724,772 (+)EnsemblGRCh38hg38GRCh38
GRCh38 Ensembl2219,714,503 - 19,724,224 (+)EnsemblGRCh38hg38GRCh38
GRCh382219,717,220 - 19,724,774 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372219,704,743 - 19,712,297 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362218,081,987 - 18,092,297 (+)NCBINCBI36hg18NCBI36
Build 342218,076,540 - 18,085,396NCBI
Celera223,554,100 - 3,564,410 (+)NCBI
Cytogenetic Map22q11.21NCBI
HuRef223,324,728 - 3,332,283 (+)NCBIHuRef
CHM1_12219,704,307 - 19,711,861 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on SEPTIN5
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1350777
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2020-06-18
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.