ZFPL1 (zinc finger protein like 1) - Rat Genome Database

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Gene: ZFPL1 (zinc finger protein like 1) Homo sapiens
Analyze
Symbol: ZFPL1
Name: zinc finger protein like 1
RGD ID: 1350269
HGNC Page HGNC:12868
Description: Predicted to enable zinc ion binding activity. Predicted to be involved in vesicle-mediated transport. Located in Golgi apparatus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: D11S750; MCG4; zinc finger protein MCG4; zinc finger protein-like 1; zinc-finger protein in MEN1 region
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,084,222 - 65,088,398 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,084,210 - 65,088,398 (+)EnsemblGRCh38hg38GRCh38
GRCh371164,851,694 - 64,855,870 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361164,608,270 - 64,612,450 (+)NCBINCBI36Build 36hg18NCBI36
Build 341164,608,282 - 64,612,441NCBI
Celera1162,177,992 - 62,182,172 (+)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1161,178,326 - 61,182,506 (+)NCBIHuRef
CHM1_11164,735,392 - 64,739,572 (+)NCBICHM1_1
T2T-CHM13v2.01165,077,500 - 65,081,676 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
Golgi apparatus  (IBA,IDA,IEA)
membrane  (IEA)
nucleus  (NAS)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9253601   PMID:9653652   PMID:12477932   PMID:12878157   PMID:14671302   PMID:15489334   PMID:16169070   PMID:18029348   PMID:18323775   PMID:21873635   PMID:22810586   PMID:26186194  
PMID:26344197   PMID:26496610   PMID:26972000   PMID:28443643   PMID:28447717   PMID:28514442   PMID:29180619   PMID:29509190   PMID:29568061   PMID:29961565   PMID:30036656   PMID:30194290  
PMID:30572598   PMID:30631154   PMID:31056421   PMID:31073040   PMID:32296183   PMID:32513696   PMID:32687490   PMID:33060197   PMID:33845483   PMID:33961781   PMID:34079125   PMID:34237211  
PMID:34597346   PMID:35256949   PMID:35337019   PMID:35944360   PMID:36215168   PMID:36217030   PMID:36799165   PMID:36949045   PMID:37774976   PMID:38070861  


Genomics

Comparative Map Data
ZFPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381165,084,222 - 65,088,398 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1165,084,210 - 65,088,398 (+)EnsemblGRCh38hg38GRCh38
GRCh371164,851,694 - 64,855,870 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361164,608,270 - 64,612,450 (+)NCBINCBI36Build 36hg18NCBI36
Build 341164,608,282 - 64,612,441NCBI
Celera1162,177,992 - 62,182,172 (+)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1161,178,326 - 61,182,506 (+)NCBIHuRef
CHM1_11164,735,392 - 64,739,572 (+)NCBICHM1_1
T2T-CHM13v2.01165,077,500 - 65,081,676 (+)NCBIT2T-CHM13v2.0
Zfpl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39196,130,792 - 6,134,961 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl196,130,792 - 6,134,986 (-)EnsemblGRCm39 Ensembl
GRCm38196,080,757 - 6,084,975 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl196,080,762 - 6,084,956 (-)EnsemblGRCm38mm10GRCm38
MGSCv37196,080,762 - 6,084,891 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36196,080,762 - 6,084,891 (-)NCBIMGSCv36mm8
Celera195,953,229 - 5,957,354 (-)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.34NCBI
Zfpl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81212,803,790 - 212,807,803 (-)NCBIGRCr8
mRatBN7.21203,374,500 - 203,378,518 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1203,374,504 - 203,378,487 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,727,549 - 211,731,469 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01218,819,869 - 218,823,784 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01211,510,938 - 211,514,853 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01221,444,588 - 221,448,555 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,443,901 - 221,448,570 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,380,022 - 228,383,983 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1200,908,191 - 200,912,106 (-)NCBICelera
Cytogenetic Map1q43NCBI
Zfpl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542220,108,379 - 20,114,441 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542220,110,514 - 20,114,447 (-)NCBIChiLan1.0ChiLan1.0
ZFPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2966,311,041 - 66,315,239 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11167,354,032 - 67,358,197 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01160,440,566 - 60,444,734 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11163,779,161 - 63,783,404 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1163,779,161 - 63,783,404 (+)Ensemblpanpan1.1panPan2
ZFPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11852,110,956 - 52,114,993 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1852,110,962 - 52,114,480 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,719,030 - 50,723,085 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01853,152,588 - 53,156,645 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1853,152,588 - 53,156,603 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11852,247,788 - 52,251,865 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01851,821,821 - 51,825,903 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,616,657 - 52,620,714 (-)NCBIUU_Cfam_GSD_1.0
Zfpl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049477,838,522 - 7,842,513 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365994,278,553 - 4,284,915 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365994,280,871 - 4,284,871 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZFPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl27,098,766 - 7,103,536 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.127,099,227 - 7,103,581 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.226,231,271 - 6,235,616 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZFPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.119,147,190 - 9,151,350 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl19,146,129 - 9,151,440 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038106,528,932 - 106,533,165 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zfpl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476721,316,396 - 21,321,227 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476721,317,285 - 21,321,290 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZFPL1
17 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_006782.3(ZFPL1):c.214+63C>T single nucleotide variant Malignant melanoma [RCV000069603] Chr11:65085289 [GRCh38]
Chr11:64852761 [GRCh37]
Chr11:64609337 [NCBI36]
Chr11:11q13.1		 not provided
NM_006782.3(ZFPL1):c.439C>T (p.Pro147Ser) single nucleotide variant Malignant melanoma [RCV000069604] Chr11:65086750 [GRCh38]
Chr11:64854222 [GRCh37]
Chr11:64610798 [NCBI36]
Chr11:11q13.1		 not provided
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11q13.1-13.2(chr11:64501919-67129258)x3 copy number gain See cases [RCV000511632] Chr11:64501919..67129258 [GRCh37]
Chr11:11q13.1-13.2		 likely pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25		 pathogenic
NM_006782.4(ZFPL1):c.569C>T (p.Pro190Leu) single nucleotide variant Inborn genetic diseases [RCV003268893] Chr11:65087015 [GRCh38]
Chr11:64854487 [GRCh37]
Chr11:11q13.1		 uncertain significance
dup(11)(q13.1q13.1) duplication Ependymoma [RCV000785872] Chr11:63533279..65429676 [GRCh37]
Chr11:11q13.1		 likely pathogenic
GRCh37/hg19 11q13.1(chr11:64396501-64883447)x3 copy number gain not provided [RCV000848683] Chr11:64396501..64883447 [GRCh37]
Chr11:11q13.1		 uncertain significance
Single allele deletion Intellectual disability [RCV001293382] Chr11:118359328..118372573 [GRCh37]
Chr11:11p15.3-q23.3		 pathogenic
NC_000011.9:g.(?_59596957)_(68707199_?)dup duplication Familial temporal lobe epilepsy 8 [RCV001372442] Chr11:59596957..68707199 [GRCh37]
Chr11:11q12.1-13.3		 uncertain significance
NM_006782.4(ZFPL1):c.280G>A (p.Gly94Ser) single nucleotide variant Inborn genetic diseases [RCV003277124] Chr11:65086480 [GRCh38]
Chr11:64853952 [GRCh37]
Chr11:11q13.1		 uncertain significance
NC_000011.9:g.(?_64522783)_(66283694_?)del deletion Bardet-Biedl syndrome [RCV002014493]|Glycogen storage disease, type V [RCV002004587] Chr11:64522783..66283694 [GRCh37]
Chr11:11q13.1-13.2		 pathogenic
NC_000011.9:g.(?_58916346)_(64972349_?)dup duplication Leukocyte adhesion deficiency 3 [RCV003113394]|not provided [RCV003113393] Chr11:58916346..64972349 [GRCh37]
Chr11:11q12.1-13.1		 uncertain significance|no classifications from unflagged records
GRCh37/hg19 11p13-q25(chr11:32799481-134938470)x3 copy number gain MISSED ABORTION [RCV002282973] Chr11:32799481..134938470 [GRCh37]
Chr11:11p13-q25		 pathogenic
NM_006782.4(ZFPL1):c.161G>A (p.Arg54His) single nucleotide variant Inborn genetic diseases [RCV002749789] Chr11:65085173 [GRCh38]
Chr11:64852645 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.323C>G (p.Thr108Ser) single nucleotide variant Inborn genetic diseases [RCV002845198] Chr11:65086523 [GRCh38]
Chr11:64853995 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.445A>G (p.Asn149Asp) single nucleotide variant Inborn genetic diseases [RCV002758364] Chr11:65086756 [GRCh38]
Chr11:64854228 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.548C>A (p.Ala183Asp) single nucleotide variant Inborn genetic diseases [RCV002912301] Chr11:65086994 [GRCh38]
Chr11:64854466 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.686A>G (p.Asp229Gly) single nucleotide variant Inborn genetic diseases [RCV002804177] Chr11:65087373 [GRCh38]
Chr11:64854845 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.386G>A (p.Arg129Gln) single nucleotide variant Inborn genetic diseases [RCV002764596] Chr11:65086586 [GRCh38]
Chr11:64854058 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.608A>G (p.Asn203Ser) single nucleotide variant Inborn genetic diseases [RCV002832486] Chr11:65087054 [GRCh38]
Chr11:64854526 [GRCh37]
Chr11:11q13.1		 likely benign
NM_006782.4(ZFPL1):c.92A>G (p.Asn31Ser) single nucleotide variant Inborn genetic diseases [RCV002668667] Chr11:65084790 [GRCh38]
Chr11:64852262 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.713G>A (p.Arg238Gln) single nucleotide variant Inborn genetic diseases [RCV002965297] Chr11:65087400 [GRCh38]
Chr11:64854872 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.773C>T (p.Pro258Leu) single nucleotide variant Inborn genetic diseases [RCV002674783] Chr11:65087954 [GRCh38]
Chr11:64855426 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.917G>A (p.Arg306His) single nucleotide variant Inborn genetic diseases [RCV002677486] Chr11:65088098 [GRCh38]
Chr11:64855570 [GRCh37]
Chr11:11q13.1		 uncertain significance
NM_006782.4(ZFPL1):c.392G>T (p.Gly131Val) single nucleotide variant Inborn genetic diseases [RCV003362300] Chr11:65086592 [GRCh38]
Chr11:64854064 [GRCh37]
Chr11:11q13.1		 uncertain significance
GRCh37/hg19 11q12.2-13.5(chr11:59923608-76272324)x3 copy number gain not provided [RCV003484842] Chr11:59923608..76272324 [GRCh37]
Chr11:11q12.2-13.5		 pathogenic
GRCh37/hg19 11q13.1(chr11:64573225-65193732)x3 copy number gain not provided [RCV003484844] Chr11:64573225..65193732 [GRCh37]
Chr11:11q13.1		 uncertain significance
GRCh37/hg19 11q12.1-13.3(chr11:56895955-69295402)x3 copy number gain not specified [RCV003986944] Chr11:56895955..69295402 [GRCh37]
Chr11:11q12.1-13.3		 likely pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3686
Count of miRNA genes:986
Interacting mature miRNAs:1232
Transcripts:ENST00000294258, ENST00000453524, ENST00000525509, ENST00000526289, ENST00000526334, ENST00000526440, ENST00000526791, ENST00000526945, ENST00000528123, ENST00000530488, ENST00000530744, ENST00000531761, ENST00000532200, ENST00000533216
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SGC33858  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371164,855,732 - 64,855,858UniSTSGRCh37
Build 361164,612,308 - 64,612,434RGDNCBI36
Celera1162,182,030 - 62,182,156RGD
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map11q13UniSTS
HuRef1161,182,364 - 61,182,490UniSTS
GeneMap99-GB4 RH Map11247.35UniSTS
Whitehead-RH Map11327.3UniSTS
NCBI RH Map11573.2UniSTS
RH92166  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371164,855,901 - 64,856,065UniSTSGRCh37
Build 361164,612,477 - 64,612,641RGDNCBI36
Celera1162,182,199 - 62,182,363RGD
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map11q13UniSTS
HuRef1161,182,533 - 61,182,697UniSTS
GeneMap99-GB4 RH Map11247.35UniSTS
REN72948  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711116,706,467 - 116,706,696UniSTSGRCh37
GRCh3711116,706,467 - 116,707,650UniSTSGRCh37
Build 3611116,211,677 - 116,211,906RGDNCBI36
Celera11113,864,270 - 113,864,499RGD
Celera11113,864,270 - 113,865,453UniSTS
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13UniSTS
HuRef11112,638,726 - 112,638,955UniSTS
RH11465  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3711116,706,477 - 116,706,585UniSTSGRCh37
Build 3611116,211,687 - 116,211,795RGDNCBI36
Celera11113,864,280 - 113,864,388RGD
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13UniSTS
HuRef11112,638,736 - 112,638,844UniSTS
GeneMap99-GB4 RH Map11373.38UniSTS
ZFPL1__4949  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371164,855,454 - 64,855,972UniSTSGRCh37
Build 361164,612,030 - 64,612,548RGDNCBI36
Celera1162,181,752 - 62,182,270RGD
HuRef1161,182,086 - 61,182,604UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 2355 2568 1497 422 1148 263 4100 1982 3404 171 1359 1518 175 1 1203 2741 5 2
Low 84 423 227 200 802 200 257 215 330 245 101 95 1 47 1
Below cutoff 2 2 2 2

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000294258   ⟹   ENSP00000294258
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,222 - 65,088,398 (+)Ensembl
RefSeq Acc Id: ENST00000453524   ⟹   ENSP00000415088
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,235 - 65,086,789 (+)Ensembl
RefSeq Acc Id: ENST00000525509   ⟹   ENSP00000433673
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,223 - 65,085,012 (+)Ensembl
RefSeq Acc Id: ENST00000526289
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,241 - 65,085,864 (+)Ensembl
RefSeq Acc Id: ENST00000526334   ⟹   ENSP00000434454
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,242 - 65,087,011 (+)Ensembl
RefSeq Acc Id: ENST00000526440
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,242 - 65,086,439 (+)Ensembl
RefSeq Acc Id: ENST00000526791   ⟹   ENSP00000432833
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,290 - 65,085,003 (+)Ensembl
RefSeq Acc Id: ENST00000526945   ⟹   ENSP00000432529
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,329 - 65,086,982 (+)Ensembl
RefSeq Acc Id: ENST00000528123
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,086,339 - 65,087,416 (+)Ensembl
RefSeq Acc Id: ENST00000530488   ⟹   ENSP00000432377
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,085,153 - 65,086,789 (+)Ensembl
RefSeq Acc Id: ENST00000530744   ⟹   ENSP00000434780
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,085,287 - 65,087,410 (+)Ensembl
RefSeq Acc Id: ENST00000531761   ⟹   ENSP00000435677
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,230 - 65,086,784 (+)Ensembl
RefSeq Acc Id: ENST00000532200   ⟹   ENSP00000437090
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,519 - 65,087,068 (+)Ensembl
RefSeq Acc Id: ENST00000533216
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,242 - 65,086,013 (+)Ensembl
RefSeq Acc Id: ENST00000650243
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1165,084,210 - 65,088,385 (+)Ensembl
RefSeq Acc Id: NM_006782   ⟹   NP_006773
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381165,084,222 - 65,088,398 (+)NCBI
GRCh371164,851,694 - 64,855,874 (+)RGD
Build 361164,608,270 - 64,612,450 (+)NCBI Archive
Celera1162,177,992 - 62,182,172 (+)RGD
HuRef1161,178,326 - 61,182,506 (+)ENTREZGENE
CHM1_11164,735,392 - 64,739,572 (+)NCBI
T2T-CHM13v2.01165,077,500 - 65,081,676 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_006773   ⟸   NM_006782
- UniProtKB: O14616 (UniProtKB/Swiss-Prot),   A8K7E9 (UniProtKB/Swiss-Prot),   Q9UID0 (UniProtKB/Swiss-Prot),   O95159 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000294258   ⟸   ENST00000294258
RefSeq Acc Id: ENSP00000434780   ⟸   ENST00000530744
RefSeq Acc Id: ENSP00000432377   ⟸   ENST00000530488
RefSeq Acc Id: ENSP00000435677   ⟸   ENST00000531761
RefSeq Acc Id: ENSP00000415088   ⟸   ENST00000453524
RefSeq Acc Id: ENSP00000437090   ⟸   ENST00000532200
RefSeq Acc Id: ENSP00000433673   ⟸   ENST00000525509
RefSeq Acc Id: ENSP00000434454   ⟸   ENST00000526334
RefSeq Acc Id: ENSP00000432529   ⟸   ENST00000526945
RefSeq Acc Id: ENSP00000432833   ⟸   ENST00000526791

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O95159-F1-model_v2 AlphaFold O95159 1-310 view protein structure

Promoters
RGD ID:6788618
Promoter ID:HG_KWN:13299
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000404147,   NM_006782,   OTTHUMT00000318028,   OTTHUMT00000318029,   OTTHUMT00000318030,   UC009YQA.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361164,607,421 - 64,608,312 (-)MPROMDB
RGD ID:6852380
Promoter ID:EP73997
Type:initiation region
Name:HS_ZFPL1
Description:Zinc finger protein-like 1.
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 361164,608,283 - 64,608,343EPD
RGD ID:7220971
Promoter ID:EPDNEW_H16232
Type:initiation region
Name:ZFPL1_1
Description:zinc finger protein like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381165,084,222 - 65,084,282EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:12868 AgrOrtholog
COSMIC ZFPL1 COSMIC
Ensembl Genes ENSG00000162300 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000294258 ENTREZGENE
  ENST00000294258.8 UniProtKB/Swiss-Prot
  ENST00000453524.6 UniProtKB/TrEMBL
  ENST00000525509.1 UniProtKB/TrEMBL
  ENST00000526334.5 UniProtKB/TrEMBL
  ENST00000526791.1 UniProtKB/TrEMBL
  ENST00000526945.5 UniProtKB/TrEMBL
  ENST00000530488.1 UniProtKB/TrEMBL
  ENST00000530744.5 UniProtKB/TrEMBL
  ENST00000531761.5 UniProtKB/TrEMBL
  ENST00000532200.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000162300 GTEx
HGNC ID HGNC:12868 ENTREZGENE
Human Proteome Map ZFPL1 Human Proteome Map
InterPro ZFPL1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:7542 UniProtKB/Swiss-Prot
NCBI Gene 7542 ENTREZGENE
OMIM 619397 OMIM
PANTHER PTHR12981 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZINC FINGER PROTEIN-LIKE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA37457 PharmGKB
Superfamily-SCOP B-box zinc-binding domain UniProtKB/TrEMBL
UniProt A0A0G2JKQ6_HUMAN UniProtKB/TrEMBL
  A8K7E9 ENTREZGENE
  E9PJ47_HUMAN UniProtKB/TrEMBL
  E9PJX1_HUMAN UniProtKB/TrEMBL
  E9PMQ3_HUMAN UniProtKB/TrEMBL
  E9PNY1_HUMAN UniProtKB/TrEMBL
  E9PQ47_HUMAN UniProtKB/TrEMBL
  E9PQA5_HUMAN UniProtKB/TrEMBL
  H0YCU8_HUMAN UniProtKB/TrEMBL
  O14616 ENTREZGENE
  O95159 ENTREZGENE
  Q9UID0 ENTREZGENE
  ZFPL1_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary A8K7E9 UniProtKB/Swiss-Prot
  O14616 UniProtKB/Swiss-Prot
  Q9UID0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-16 ZFPL1  zinc finger protein like 1    zinc finger protein-like 1  Symbol and/or name change 5135510 APPROVED