CFL1P2 (cofilin 1 pseudogene 2) - Rat Genome Database

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Gene: CFL1P2 (cofilin 1 pseudogene 2) Homo sapiens
Analyze
Symbol: CFL1P2
Name: cofilin 1 pseudogene 2
RGD ID: 1349932
HGNC Page HGNC:1878
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Previously known as: CFLL2; CFLP2
Related Functional Gene: CFL1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38151,157,439 - 51,158,540 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl151,157,788 - 51,158,471 (-)EnsemblGRCh38hg38GRCh38
GRCh37151,623,111 - 51,624,212 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36151,396,105 - 51,397,091 (-)NCBINCBI36Build 36hg18NCBI36
Celera149,909,845 - 49,910,740 (-)NCBICelera
Cytogenetic Map1p32.3NCBI
HuRef149,740,913 - 49,742,007 (-)NCBIHuRef
CHM1_1151,740,675 - 51,741,770 (-)NCBICHM1_1
T2T-CHM13v2.0151,037,339 - 51,038,439 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:187
Count of miRNA genes:177
Interacting mature miRNAs:183
Transcripts:ENST00000440986
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium
Low 31 114 13 4 124 2 120 15 93 7 373 50 2 16 57 1
Below cutoff 1506 1990 963 262 1041 163 2520 1138 2656 180 604 956 105 843 1634 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000440986
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl151,157,788 - 51,158,471 (-)Ensembl
RefSeq Acc Id: XR_017560
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
Build 36151,396,105 - 51,397,091 (-)NCBI Archive

Additional Information

Database Acc Id Source(s)
COSMIC CFL1P2 COSMIC
Ensembl Genes ENSG00000213478 Ensembl
GTEx ENSG00000213478 GTEx
HGNC ID HGNC:1878 ENTREZGENE
Human Proteome Map CFL1P2 Human Proteome Map
NCBI Gene 391039 ENTREZGENE
PharmGKB PA26427 PharmGKB


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-26 CFL1P2  cofilin 1 pseudogene 2    cofilin 1 (non-muscle) pseudogene 2  Symbol and/or name change 5135510 APPROVED
2011-07-27 CFL1P2  cofilin 1 (non-muscle) pseudogene 2  CFLP2  cofilin pseudogene 2  Symbol and/or name change 5135510 APPROVED