TMED5 (transmembrane p24 trafficking protein 5) - Rat Genome Database

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Gene: TMED5 (transmembrane p24 trafficking protein 5) Homo sapiens
Analyze
Symbol: TMED5
Name: transmembrane p24 trafficking protein 5
RGD ID: 1349482
HGNC Page HGNC:24251
Description: Predicted to enable cargo receptor activity. Involved in Golgi ribbon formation. Located in cis-Golgi network; endoplasmic reticulum exit site; and endoplasmic reticulum-Golgi intermediate compartment.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: CGI-100; DKFZp781B2248; p24 family protein gamma-2; p24g2; p24gamma2; p28; RP5-976O13.2; transmembrane emp24 domain-containing protein 5; transmembrane emp24 protein transport domain containing 5
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38193,149,742 - 93,180,413 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl193,149,742 - 93,180,516 (-)EnsemblGRCh38hg38GRCh38
GRCh37193,615,299 - 93,645,970 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36193,389,999 - 93,418,834 (-)NCBINCBI36Build 36hg18NCBI36
Build 34193,329,427 - 93,358,267NCBI
Celera191,869,455 - 91,900,413 (-)NCBICelera
Cytogenetic Map1p22.1NCBI
HuRef191,736,849 - 91,767,806 (-)NCBIHuRef
CHM1_1193,730,202 - 93,761,150 (-)NCBICHM1_1
T2T-CHM13v2.0192,995,327 - 93,026,003 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
4-hydroxyphenyl retinamide  (ISO)
4-phenylbutyric acid  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (EXP)
aflatoxin B1  (ISO)
amitrole  (ISO)
antirheumatic drug  (EXP)
aristolochic acid A  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (ISO)
carnosic acid  (ISO)
chloropicrin  (EXP)
chloroprene  (ISO)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (EXP)
clofibrate  (ISO)
clorgyline  (EXP)
cocaine  (ISO)
copper(II) sulfate  (EXP)
cyclosporin A  (EXP)
dichloroacetic acid  (ISO)
disodium selenite  (EXP)
dorsomorphin  (EXP)
entinostat  (EXP)
folic acid  (ISO)
formaldehyde  (EXP)
isotretinoin  (EXP)
ivermectin  (EXP)
methimazole  (ISO)
methoxyacetic acid  (ISO)
methylmercury chloride  (EXP,ISO)
miconazole  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
Monobutylphthalate  (ISO)
oxaliplatin  (ISO)
panobinostat  (EXP)
paracetamol  (EXP,ISO)
paraquat  (ISO)
PCB138  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
permethrin  (ISO)
phenobarbital  (ISO)
phenylmercury acetate  (EXP)
pirinixic acid  (ISO)
resveratrol  (ISO)
SB 431542  (EXP)
sodium arsenite  (EXP)
sulfadimethoxine  (ISO)
tetrachloroethene  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP,ISO)
topotecan  (ISO)
trichloroethene  (ISO)
triptonide  (ISO)
tunicamycin  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vorinostat  (EXP)
xylitol  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:8889548   PMID:10810093   PMID:12975309   PMID:15308636   PMID:15489334   PMID:16710414   PMID:17207965   PMID:18549622   PMID:19948005   PMID:21873635   PMID:23455924   PMID:24778190  
PMID:26186194   PMID:26496610   PMID:28514442   PMID:28718761   PMID:29121065   PMID:29229926   PMID:29507755   PMID:30463901   PMID:31586073   PMID:31980649   PMID:32296183   PMID:33087821  
PMID:33144569   PMID:33766124   PMID:33961781   PMID:34404391   PMID:35140242   PMID:35271311   PMID:35696571   PMID:36180527   PMID:36530030   PMID:37827155  


Genomics

Comparative Map Data
TMED5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38193,149,742 - 93,180,413 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl193,149,742 - 93,180,516 (-)EnsemblGRCh38hg38GRCh38
GRCh37193,615,299 - 93,645,970 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36193,389,999 - 93,418,834 (-)NCBINCBI36Build 36hg18NCBI36
Build 34193,329,427 - 93,358,267NCBI
Celera191,869,455 - 91,900,413 (-)NCBICelera
Cytogenetic Map1p22.1NCBI
HuRef191,736,849 - 91,767,806 (-)NCBIHuRef
CHM1_1193,730,202 - 93,761,150 (-)NCBICHM1_1
T2T-CHM13v2.0192,995,327 - 93,026,003 (-)NCBIT2T-CHM13v2.0
Tmed5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395108,269,422 - 108,280,486 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5108,254,232 - 108,280,486 (-)EnsemblGRCm39 Ensembl
GRCm385108,121,556 - 108,132,620 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5108,106,366 - 108,132,620 (-)EnsemblGRCm38mm10GRCm38
MGSCv375108,550,666 - 108,561,610 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365108,361,949 - 108,372,893 (-)NCBIMGSCv36mm8
Celera5105,239,859 - 105,250,741 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map552.49NCBI
Tmed5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8141,752,857 - 1,763,990 (+)NCBIGRCr8
mRatBN7.2141,607,895 - 1,619,028 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl141,607,819 - 1,628,426 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,486,848 - 1,497,987 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0142,788,621 - 2,799,760 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0141,485,296 - 1,496,437 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0142,613,318 - 2,624,773 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl142,613,406 - 2,633,950 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,612,362 - 2,623,817 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4142,155,594 - 2,167,280 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1142,155,593 - 2,167,271 (+)NCBI
Celera141,628,691 - 1,639,884 (+)NCBICelera
Cytogenetic Map14p22NCBI
Tmed5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554231,436,628 - 1,456,970 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554231,436,628 - 1,456,970 (+)NCBIChiLan1.0ChiLan1.0
TMED5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21133,835,694 - 133,864,516 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11132,990,585 - 133,019,411 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0195,821,324 - 95,850,099 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1194,552,590 - 94,582,875 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl194,552,590 - 94,582,875 (-)Ensemblpanpan1.1panPan2
TMED5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1655,917,842 - 55,934,880 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl655,918,077 - 55,932,169 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha658,618,896 - 58,635,690 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0656,293,071 - 56,309,877 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl656,291,987 - 56,309,868 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1655,973,295 - 55,990,051 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0655,951,620 - 55,968,403 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0656,410,717 - 56,427,517 (+)NCBIUU_Cfam_GSD_1.0
Tmed5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058102,889,539 - 102,909,871 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365376,038,207 - 6,058,437 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365376,038,109 - 6,058,434 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TMED5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4124,009,816 - 124,030,773 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14124,009,825 - 124,027,445 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24135,564,674 - 135,581,598 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TMED5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12040,074,505 - 40,102,773 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2040,074,545 - 40,099,963 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603377,924,333 - 77,952,991 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tmed5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247424,508,777 - 4,535,416 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247424,508,988 - 4,558,909 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TMED5
9 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1p31.1-13.3(chr1:72661709-107456880)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051825]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051825]|See cases [RCV000051825] Chr1:72661709..107456880 [GRCh38]
Chr1:73127392..107999502 [GRCh37]
Chr1:72899980..107801025 [NCBI36]
Chr1:1p31.1-13.3		 pathogenic
GRCh38/hg38 1p31.1-21.1(chr1:83457325-104273917)x3 copy number gain See cases [RCV000135654] Chr1:83457325..104273917 [GRCh38]
Chr1:83923008..104816539 [GRCh37]
Chr1:83695596..104618062 [NCBI36]
Chr1:1p31.1-21.1		 pathogenic
GRCh38/hg38 1p22.1(chr1:92490929-93507291)x1 copy number loss See cases [RCV000140084] Chr1:92490929..93507291 [GRCh38]
Chr1:92956486..93972848 [GRCh37]
Chr1:92729074..93745436 [NCBI36]
Chr1:1p22.1		 pathogenic
GRCh37/hg19 1p36.12-12(chr1:20608823-120546301)x3 copy number loss not provided [RCV000762767] Chr1:20608823..120546301 [GRCh37]
Chr1:1p36.12-12		 likely benign
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p22.1(chr1:93603954-93827300)x3 copy number gain not provided [RCV000749066] Chr1:93603954..93827300 [GRCh37]
Chr1:1p22.1		 benign
GRCh37/hg19 1p36.22-21.1(chr1:103343285-103455144)x3 copy number gain Global developmental delay [RCV000787285] Chr1:103343285..103455144 [GRCh37]
Chr1:1p36.22-21.1		 uncertain significance
NM_016040.5(TMED5):c.609A>G (p.Leu203=) single nucleotide variant not provided [RCV000923359] Chr1:93154751 [GRCh38]
Chr1:93620308 [GRCh37]
Chr1:1p22.1		 benign
NM_016040.5(TMED5):c.599T>C (p.Met200Thr) single nucleotide variant not provided [RCV000969399] Chr1:93154761 [GRCh38]
Chr1:93620318 [GRCh37]
Chr1:1p22.1		 benign
GRCh37/hg19 1p22.1(chr1:92405898-94018197)x1 copy number loss Diamond-Blackfan anemia 6 [RCV001263220] Chr1:92405898..94018197 [GRCh37]
Chr1:1p22.1		 pathogenic
NM_016040.5(TMED5):c.180C>G (p.Ile60Met) single nucleotide variant Inborn genetic diseases [RCV002845444] Chr1:93180063 [GRCh38]
Chr1:93645620 [GRCh37]
Chr1:1p22.1		 uncertain significance
NM_016040.5(TMED5):c.533G>C (p.Arg178Thr) single nucleotide variant Inborn genetic diseases [RCV002989383] Chr1:93154827 [GRCh38]
Chr1:93620384 [GRCh37]
Chr1:1p22.1		 uncertain significance
NM_016040.5(TMED5):c.470T>G (p.Leu157Arg) single nucleotide variant Inborn genetic diseases [RCV002769534] Chr1:93156301 [GRCh38]
Chr1:93621858 [GRCh37]
Chr1:1p22.1		 uncertain significance
NM_016040.5(TMED5):c.386T>A (p.Met129Lys) single nucleotide variant Inborn genetic diseases [RCV003175580] Chr1:93156385 [GRCh38]
Chr1:93621942 [GRCh37]
Chr1:1p22.1		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2681
Count of miRNA genes:897
Interacting mature miRNAs:1072
Transcripts:ENST00000370280, ENST00000370282, ENST00000370290, ENST00000479918, ENST00000483033
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH68402  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,621,836 - 93,621,997UniSTSGRCh37
Build 36193,394,424 - 93,394,585RGDNCBI36
Celera191,875,992 - 91,876,153RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,743,386 - 91,743,547UniSTS
GeneMap99-GB4 RH Map1258.1UniSTS
SHGC-78762  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,618,140 - 93,618,451UniSTSGRCh37
Build 36193,390,728 - 93,391,039RGDNCBI36
Celera191,872,296 - 91,872,607RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,739,690 - 91,740,001UniSTS
TNG Radiation Hybrid Map150834.0UniSTS
D1S309E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,617,449 - 93,617,690UniSTSGRCh37
Build 36193,390,037 - 93,390,278RGDNCBI36
Celera191,871,605 - 91,871,846RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,738,999 - 91,739,240UniSTS
Stanford-G3 RH Map14529.0UniSTS
NCBI RH Map1652.0UniSTS
GeneMap99-G3 RH Map14485.0UniSTS
SHGC-75141  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,621,904 - 93,622,044UniSTSGRCh37
Build 36193,394,492 - 93,394,632RGDNCBI36
Celera191,876,060 - 91,876,200RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,743,454 - 91,743,594UniSTS
TNG Radiation Hybrid Map150834.0UniSTS
GeneMap99-GB4 RH Map1258.1UniSTS
G29243  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,617,433 - 93,617,568UniSTSGRCh37
Build 36193,390,021 - 93,390,156RGDNCBI36
Celera191,871,589 - 91,871,724RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,738,983 - 91,739,118UniSTS
RH64504  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,617,537 - 93,617,615UniSTSGRCh37
Build 36193,390,125 - 93,390,203RGDNCBI36
Celera191,871,693 - 91,871,771RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,739,087 - 91,739,165UniSTS
GeneMap99-GB4 RH Map1264.0UniSTS
WI-20561  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,617,452 - 93,617,609UniSTSGRCh37
Build 36193,390,040 - 93,390,197RGDNCBI36
Celera191,871,608 - 91,871,765RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,739,002 - 91,739,159UniSTS
GeneMap99-GB4 RH Map1262.86UniSTS
GeneMap99-GB4 RH Map1265.65UniSTS
Whitehead-RH Map1272.1UniSTS
NCBI RH Map1646.7UniSTS
HUM0S14E06  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,617,775 - 93,617,972UniSTSGRCh37
Build 36193,390,363 - 93,390,560RGDNCBI36
Celera191,871,931 - 91,872,128RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,739,325 - 91,739,522UniSTS
TNG Radiation Hybrid Map150834.0UniSTS
Stanford-G3 RH Map14525.0UniSTS
NCBI RH Map1652.0UniSTS
GeneMap99-G3 RH Map14481.0UniSTS
RH66180  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,619,902 - 93,620,075UniSTSGRCh37
Build 36193,392,490 - 93,392,663RGDNCBI36
Celera191,874,058 - 91,874,231RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,741,452 - 91,741,625UniSTS
GeneMap99-GB4 RH Map1268.47UniSTS
AL009805  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37193,625,459 - 93,625,625UniSTSGRCh37
Build 36193,398,047 - 93,398,213RGDNCBI36
Celera191,879,615 - 91,879,781RGD
Cytogenetic Map1pter-q31.3UniSTS
HuRef191,747,009 - 91,747,175UniSTS
D13S1639  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map8q22.1UniSTS
D10S16   No map positions available.
GDB:434012  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map2q31.2-q33.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map5q21UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map17q25.2UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map1p21.3-p13.1UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map1q24-q25.3UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map10p11.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map1p36-p35UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map4p16UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map6pter-p12.1UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map14q31UniSTS
D10S16  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map2q11.2-q12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map3p22UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map9p13.3-p12UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map5q21-q22UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map1q24.1UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map4q34UniSTS
Cytogenetic Map2p22-p21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map1p36.23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map12p12.1-p11.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map5p15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map17qterUniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map20q12-q13.12UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map1pter-q31.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map3p23-p21UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1p36.1-p34UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.1-q21.2UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map15q24.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map3p23UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map19qterUniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map17pUniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map3q26.2UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1694 1809 1519 523 1376 410 2810 1411 1187 339 1033 1577 126 1163 1818 3
Low 740 1177 204 100 573 55 1545 780 2531 79 418 34 47 41 970 1 1
Below cutoff 2 3 3 1 1 1 5 15 1 7 2 2 1 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001167830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001410825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_030761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC126124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF151858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI436590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK125882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK293308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL080084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL117354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY359039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX642274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA314982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR936808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF454984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000370280   ⟹   ENSP00000359303
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl193,156,040 - 93,180,261 (-)Ensembl
RefSeq Acc Id: ENST00000370282   ⟹   ENSP00000359305
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl193,149,742 - 93,180,413 (-)Ensembl
RefSeq Acc Id: ENST00000370290   ⟹   ENSP00000471060
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl193,151,858 - 93,180,516 (-)Ensembl
RefSeq Acc Id: ENST00000479918   ⟹   ENSP00000418992
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl193,154,232 - 93,180,361 (-)Ensembl
RefSeq Acc Id: ENST00000483033
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl193,154,196 - 93,163,210 (-)Ensembl
RefSeq Acc Id: NM_001167830   ⟹   NP_001161302
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38193,149,742 - 93,180,413 (-)NCBI
GRCh37193,615,299 - 93,646,246 (-)RGD
Celera191,869,455 - 91,900,413 (-)RGD
HuRef191,736,849 - 91,767,806 (-)ENTREZGENE
CHM1_1193,730,202 - 93,761,150 (-)NCBI
T2T-CHM13v2.0192,995,327 - 93,026,003 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001410825   ⟹   NP_001397754
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38193,156,258 - 93,180,413 (-)NCBI
T2T-CHM13v2.0193,001,843 - 93,026,003 (-)NCBI
RefSeq Acc Id: NM_016040   ⟹   NP_057124
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38193,149,742 - 93,180,413 (-)NCBI
GRCh37193,615,299 - 93,646,246 (-)RGD
Build 36193,389,999 - 93,418,834 (-)NCBI Archive
Celera191,869,455 - 91,900,413 (-)RGD
HuRef191,736,849 - 91,767,806 (-)ENTREZGENE
CHM1_1193,730,202 - 93,761,150 (-)NCBI
T2T-CHM13v2.0192,995,327 - 93,026,003 (-)NCBI
Sequence:
RefSeq Acc Id: NR_030761
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38193,149,742 - 93,180,413 (-)NCBI
GRCh37193,615,299 - 93,646,246 (-)RGD
Celera191,869,455 - 91,900,413 (-)RGD
HuRef191,736,849 - 91,767,806 (-)ENTREZGENE
CHM1_1193,730,202 - 93,761,150 (-)NCBI
T2T-CHM13v2.0192,995,327 - 93,026,003 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_057124   ⟸   NM_016040
- Peptide Label: isoform 1 precursor
- UniProtKB: D3DT38 (UniProtKB/Swiss-Prot),   B2R703 (UniProtKB/Swiss-Prot),   B1AKT4 (UniProtKB/Swiss-Prot),   Q96AX8 (UniProtKB/Swiss-Prot),   Q9Y3A6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161302   ⟸   NM_001167830
- Peptide Label: isoform 2 precursor
- UniProtKB: B1AKT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000359303   ⟸   ENST00000370280
RefSeq Acc Id: ENSP00000359305   ⟸   ENST00000370282
RefSeq Acc Id: ENSP00000471060   ⟸   ENST00000370290
RefSeq Acc Id: ENSP00000418992   ⟸   ENST00000479918
RefSeq Acc Id: NP_001397754   ⟸   NM_001410825
- Peptide Label: isoform 3 precursor
- UniProtKB: M0R072 (UniProtKB/TrEMBL)
Protein Domains
GOLD

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Y3A6-F1-model_v2 AlphaFold Q9Y3A6 1-229 view protein structure

Promoters
RGD ID:6856234
Promoter ID:EPDNEW_H1282
Type:initiation region
Name:TMED5_1
Description:transmembrane p24 trafficking protein 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1283  EPDNEW_H1285  EPDNEW_H1286  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38193,180,413 - 93,180,473EPDNEW
RGD ID:6856236
Promoter ID:EPDNEW_H1283
Type:initiation region
Name:TMED5_3
Description:transmembrane p24 trafficking protein 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1282  EPDNEW_H1285  EPDNEW_H1286  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38193,180,686 - 93,180,746EPDNEW
RGD ID:6856240
Promoter ID:EPDNEW_H1285
Type:initiation region
Name:TMED5_4
Description:transmembrane p24 trafficking protein 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1282  EPDNEW_H1283  EPDNEW_H1286  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38193,181,158 - 93,181,218EPDNEW
RGD ID:6787013
Promoter ID:HG_KWN:3662
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000370280,   NM_001167830,   NR_030761,   OTTHUMT00000028076
Position:
Human AssemblyChrPosition (strand)Source
Build 36193,418,441 - 93,419,447 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:24251 AgrOrtholog
COSMIC TMED5 COSMIC
Ensembl Genes ENSG00000117500 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000370280.1 UniProtKB/TrEMBL
  ENST00000370282 ENTREZGENE
  ENST00000370282.8 UniProtKB/Swiss-Prot
  ENST00000370290 ENTREZGENE
  ENST00000370290.7 UniProtKB/TrEMBL
  ENST00000479918 ENTREZGENE
  ENST00000479918.5 UniProtKB/Swiss-Prot
GTEx ENSG00000117500 GTEx
HGNC ID HGNC:24251 ENTREZGENE
Human Proteome Map TMED5 Human Proteome Map
InterPro GOLD_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GOLD_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TMP21-related UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:50999 UniProtKB/Swiss-Prot
NCBI Gene 50999 ENTREZGENE
OMIM 616876 OMIM
PANTHER PTHR22811 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR22811:SF41 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam EMP24_GP25L UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134942067 PharmGKB
PROSITE GOLD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART EMP24_GP25L UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF101576 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1AKT3 ENTREZGENE, UniProtKB/TrEMBL
  B1AKT4 ENTREZGENE
  B2R703 ENTREZGENE
  D3DT38 ENTREZGENE
  M0R072 ENTREZGENE, UniProtKB/TrEMBL
  Q49AG2_HUMAN UniProtKB/TrEMBL
  Q96AX8 ENTREZGENE
  Q9Y3A6 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B1AKT4 UniProtKB/Swiss-Prot
  B2R703 UniProtKB/Swiss-Prot
  D3DT38 UniProtKB/Swiss-Prot
  Q96AX8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-08-18 TMED5  transmembrane p24 trafficking protein 5    transmembrane emp24 protein transport domain containing 5  Symbol and/or name change 5135510 APPROVED