MIR17 (microRNA 17) - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: MIR17 (microRNA 17) Homo sapiens
Analyze
Symbol: MIR17
Name: microRNA 17
RGD ID: 1348634
HGNC Page HGNC:31547
Description: Enables mRNA 3'-UTR binding activity and mRNA base-pairing post-transcriptional repressor activity. Involved in several processes, including negative regulation of cellular macromolecule biosynthetic process; negative regulation of low-density lipoprotein particle clearance; and negative regulation of transport. Acts upstream of or within negative regulation of osteoblast differentiation and positive regulation of fat cell differentiation. Located in extracellular space. Part of extracellular exosome.
Type: ncrna
RefSeq Status: PROVISIONAL
Previously known as: hsa-mir-17; miR-17; miR17-3p; MIR17-5p; MIR91; MIRN17; MIRN91; miRNA17; miRNA91
RGD Orthologs
Mouse
Rat
Dog
Pig
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381391,350,605 - 91,350,688 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1391,350,605 - 91,350,688 (+)EnsemblGRCh38hg38GRCh38
GRCh371392,002,859 - 92,002,942 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361390,800,859 - 90,800,942 (+)NCBINCBI36hg18NCBI36
Celera1372,849,830 - 72,849,913 (+)NCBI
Cytogenetic Map13q31.3NCBI
HuRef1372,598,694 - 72,598,777 (+)NCBIHuRef
CHM1_11391,971,499 - 91,971,582 (+)NCBICHM1_1
T2T-CHM13v2.01390,553,181 - 90,553,264 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
B cell apoptotic process  (ISO)
cellular response to decreased oxygen levels  (ISO)
cellular response to forskolin  (ISO)
cellular response to hypoxia  (IMP)
cellular response to inorganic substance  (ISO)
cellular response to lipopolysaccharide  (ISS)
in utero embryonic development  (ISO)
long-term synaptic potentiation  (ISO)
lung development  (ISO)
miRNA-mediated gene silencing  (HDA,IDA,IEA,IGI,ISO)
miRNA-mediated gene silencing by inhibition of translation  (IDA,IMP)
multicellular organismal iron ion homeostasis  (ISO)
negative regulation of amyloid precursor protein biosynthetic process  (IDA)
negative regulation of apoptosome assembly  (ISS)
negative regulation of apoptotic process  (ISO)
negative regulation of BMP secretion  (IDA)
negative regulation of BMP signaling pathway  (IMP)
negative regulation of cellular senescence  (ISS)
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process  (ISS)
negative regulation of gene expression  (IDA,IMP)
negative regulation of hydrogen peroxide-induced cell death  (ISS)
negative regulation of intrinsic apoptotic signaling pathway  (ISS)
negative regulation of low-density lipoprotein particle clearance  (IDA)
negative regulation of mitochondrial membrane permeability involved in apoptotic process  (ISS)
negative regulation of osteoblast differentiation  (IGI)
negative regulation of receptor-mediated endocytosis involved in cholesterol transport  (IDA)
negative regulation of sprouting angiogenesis  (IDA)
negative regulation of systemic arterial blood pressure  (ISS)
negative regulation of toll-like receptor signaling pathway  (IMP)
negative regulation of transforming growth factor beta receptor signaling pathway  (IDA)
negative regulation of transporter activity  (IDA)
negative regulation of vascular associated smooth muscle cell apoptotic process  (IMP)
negative regulation of vascular endothelial growth factor production  (HMP)
outflow tract morphogenesis  (ISS)
positive regulation of blood pressure  (ISS)
positive regulation of cardiac muscle cell apoptotic process  (ISS)
positive regulation of cardiac muscle hypertrophy in response to stress  (ISS)
positive regulation of connective tissue replacement involved in inflammatory response wound healing  (ISS)
positive regulation of cytokine production involved in inflammatory response  (ISS)
positive regulation of fat cell differentiation  (IGI)
positive regulation of fibroblast proliferation  (ISS)
positive regulation of gene expression  (IMP)
positive regulation of hydrogen peroxide-mediated programmed cell death  (ISS)
positive regulation of metalloendopeptidase activity  (ISS)
positive regulation of phagocytosis  (ISS)
positive regulation of pulmonary blood vessel remodeling  (ISS)
positive regulation of smooth muscle hypertrophy  (ISS)
positive regulation of vascular associated smooth muscle cell proliferation  (IDA,IMP,ISS)
pre-B cell differentiation  (ISO)
response to bacterium  (ISO)
response to wounding  (ISO)
sensory perception of sound  (ISO)
spinal cord motor neuron differentiation  (ISO)
ventricular septum morphogenesis  (ISO)

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. HIF1A and VEGF regulate each other by competing endogenous RNA mechanism and involve in the pathogenesis of peritoneal fibrosis. Li J, etal., Pathol Res Pract. 2019 Apr;215(4):644-652. doi: 10.1016/j.prp.2018.12.022. Epub 2018 Dec 26.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11679670   PMID:11914277   PMID:12554860   PMID:15183728   PMID:15325244   PMID:15944707   PMID:15944709   PMID:15978578   PMID:16381832   PMID:16940181   PMID:17284533   PMID:17604727  
PMID:17616659   PMID:18320040   PMID:18327259   PMID:18632605   PMID:18644370   PMID:18688024   PMID:18695042   PMID:18700987   PMID:18773208   PMID:18836483   PMID:18941111   PMID:19048628  
PMID:19066217   PMID:19158830   PMID:19287466   PMID:19347736   PMID:19390056   PMID:19633662   PMID:19672269   PMID:19821056   PMID:19949084   PMID:20022054   PMID:20089119   PMID:20148420  
PMID:20190813   PMID:20209605   PMID:20299512   PMID:20349219   PMID:20406904   PMID:20505989   PMID:20656682   PMID:20703102   PMID:20711463   PMID:20810544   PMID:20878079   PMID:20940405  
PMID:21037258   PMID:21040528   PMID:21067317   PMID:21145484   PMID:21176349   PMID:21203553   PMID:21283765   PMID:21338882   PMID:21370248   PMID:21444672   PMID:21508257   PMID:21816922  
PMID:21898695   PMID:21953646   PMID:21955497   PMID:21982160   PMID:22072491   PMID:22132820   PMID:22161164   PMID:22228753   PMID:22438230   PMID:22473208   PMID:22583011   PMID:22730212  
PMID:22828869   PMID:22959509   PMID:23001407   PMID:23029228   PMID:23056289   PMID:23059786   PMID:23095762   PMID:23108086   PMID:23129428   PMID:23203215   PMID:23226946   PMID:23246221  
PMID:23258273   PMID:23263848   PMID:23285084   PMID:23306545   PMID:23333058   PMID:23391506   PMID:23399447   PMID:23418359   PMID:23433743   PMID:23436804   PMID:23492770   PMID:23497354  
PMID:23562609   PMID:23568010   PMID:23583198   PMID:23602254   PMID:23661605   PMID:23728176   PMID:23768492   PMID:23770094   PMID:23780339   PMID:23818358   PMID:23911400   PMID:23936170  
PMID:23969726   PMID:24194900   PMID:24252850   PMID:24360091   PMID:24386440   PMID:24412053   PMID:24462867   PMID:24556691   PMID:24722426   PMID:24755562   PMID:24801601   PMID:24801835  
PMID:24819603   PMID:24876719   PMID:24879052   PMID:24901013   PMID:24912422   PMID:24920276   PMID:24989082   PMID:25001613   PMID:25011053   PMID:25047501   PMID:25060766   PMID:25064468  
PMID:25115392   PMID:25125661   PMID:25146671   PMID:25146963   PMID:25200830   PMID:25435430   PMID:25612891   PMID:25680407   PMID:25686840   PMID:25748447   PMID:25753880   PMID:25785043  
PMID:25912229   PMID:25915722   PMID:26041742   PMID:26117336   PMID:26160865   PMID:26175399   PMID:26231295   PMID:26318586   PMID:26431674   PMID:26465597   PMID:26482648   PMID:26513648  
PMID:26546431   PMID:26600038   PMID:26637460   PMID:26646931   PMID:26750490   PMID:26997445   PMID:26998831   PMID:27093644   PMID:27120811   PMID:27245839   PMID:27278684   PMID:27285985  
PMID:27339495   PMID:27400681   PMID:27409728   PMID:27473081   PMID:27491928   PMID:27499367   PMID:27505139   PMID:27534557   PMID:27630293   PMID:27640178   PMID:27765929   PMID:27774777  
PMID:27831559   PMID:28002789   PMID:28081732   PMID:28167506   PMID:28178652   PMID:28205547   PMID:28207735   PMID:28264488   PMID:28398248   PMID:28431233   PMID:28534369   PMID:28560387  
PMID:28621051   PMID:28745272   PMID:28771472   PMID:28798470   PMID:28875846   PMID:28971974   PMID:29115381   PMID:29115593   PMID:29289833   PMID:29367757   PMID:29433423   PMID:29441982  
PMID:29459716   PMID:29471417   PMID:29518394   PMID:29536180   PMID:29644896   PMID:29687841   PMID:29691366   PMID:29693721   PMID:29721023   PMID:29763590   PMID:29786752   PMID:29856480  
PMID:29858404   PMID:29889802   PMID:29902577   PMID:29914008   PMID:29953965   PMID:30017188   PMID:30030064   PMID:30055570   PMID:30302796   PMID:30302813   PMID:30305109   PMID:30305135  
PMID:30338914   PMID:30338929   PMID:30348222   PMID:30353329   PMID:30384383   PMID:30387831   PMID:30396754   PMID:30452398   PMID:30468285   PMID:30535441   PMID:30808771   PMID:30816540  
PMID:30861177   PMID:30905898   PMID:30989460   PMID:31026378   PMID:31075259   PMID:31146974   PMID:31148365   PMID:31198013   PMID:31233201   PMID:31244320   PMID:31257497   PMID:31261026  
PMID:31296440   PMID:31364131   PMID:31409641   PMID:31435783   PMID:31473252   PMID:31558704   PMID:31622249   PMID:31646601   PMID:31713278   PMID:31730378   PMID:31747809   PMID:31909455  
PMID:31926946   PMID:31997281   PMID:32085745   PMID:32093888   PMID:32159700   PMID:32188489   PMID:32206115   PMID:32210705   PMID:32228546   PMID:32246873   PMID:32282501   PMID:32296039  
PMID:32319624   PMID:32442343   PMID:32447210   PMID:32521902   PMID:32546833   PMID:32590607   PMID:32599355   PMID:32600075   PMID:32619376   PMID:32730779   PMID:32762281   PMID:32852903  
PMID:32859639   PMID:32902214   PMID:32924373   PMID:32933626   PMID:33030674   PMID:33123591   PMID:33146328   PMID:33241756   PMID:33296098   PMID:33483902   PMID:33519139   PMID:33537818  
PMID:33609405   PMID:33745222   PMID:33797702   PMID:33887260   PMID:33887464   PMID:33942217   PMID:34013455   PMID:34014023   PMID:34089461   PMID:34102990   PMID:34130587   PMID:34153234  
PMID:34180119   PMID:34181173   PMID:34185245   PMID:34198485   PMID:34226620   PMID:34239355   PMID:34288812   PMID:34370073   PMID:34390329   PMID:34396444   PMID:34426734   PMID:34529319  
PMID:34647142   PMID:34664684   PMID:34921177   PMID:34927777   PMID:35016493   PMID:35041140   PMID:35075166   PMID:35085690   PMID:35229202   PMID:35340210   PMID:35490164   PMID:35524830  
PMID:35536524   PMID:35799645  


Genomics

Comparative Map Data
MIR17
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381391,350,605 - 91,350,688 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1391,350,605 - 91,350,688 (+)EnsemblGRCh38hg38GRCh38
GRCh371392,002,859 - 92,002,942 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361390,800,859 - 90,800,942 (+)NCBINCBI36hg18NCBI36
Celera1372,849,830 - 72,849,913 (+)NCBI
Cytogenetic Map13q31.3NCBI
HuRef1372,598,694 - 72,598,777 (+)NCBIHuRef
CHM1_11391,971,499 - 91,971,582 (+)NCBICHM1_1
T2T-CHM13v2.01390,553,181 - 90,553,264 (+)NCBI
Mir17
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3914115,281,103 - 115,281,186 (+)NCBIGRCm39mm39
GRCm39 Ensembl14115,281,103 - 115,281,186 (+)Ensembl
GRCm3814115,043,671 - 115,043,754 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl14115,043,671 - 115,043,754 (+)EnsemblGRCm38mm10GRCm38
MGSCv3714115,442,893 - 115,442,976 (+)NCBIGRCm37mm9NCBIm37
Celera14113,634,239 - 113,634,322 (+)NCBICelera
Cytogenetic Map14E4NCBI
Mir17
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21592,180,629 - 92,180,712 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1592,180,629 - 92,180,712 (+)Ensembl
Rnor_6.015100,179,879 - 100,179,962 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl15100,179,879 - 100,179,962 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.015103,640,902 - 103,640,985 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1591,045,309 - 91,045,392 (+)NCBICelera
Cytogenetic Map15q23NCBI
MIR17
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12242,478,013 - 42,478,071 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2242,478,000 - 42,478,083 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2242,333,701 - 42,333,759 (+)NCBI
ROS_Cfam_1.02242,879,262 - 42,879,320 (+)NCBI
ROS_Cfam_1.0 Ensembl2242,879,249 - 42,879,332 (+)Ensembl
UMICH_Zoey_3.12242,561,735 - 42,561,793 (+)NCBI
UNSW_CanFamBas_1.02242,616,114 - 42,616,172 (+)NCBI
UU_Cfam_GSD_1.02242,617,177 - 42,617,235 (+)NCBI
MIR17
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1160,734,656 - 60,734,732 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11160,734,656 - 60,734,732 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21166,610,060 - 66,610,136 (+)NCBISscrofa10.2Sscrofa10.2susScr3

miRNA Target Status

Confirmed Targets
Gene TargetMature miRNAMethod NameResult TypeData TypeSupport TypePMID
ZNFX1hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI19734348
ZNFX1hsa-miR-17-5pMirtarbaseexternal_infoCLASHFunctional MTI (Weak)23622248
JAK1hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI20299512
PTENhsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI20227518
PTENhsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotNon-Functional MTI20008935
PTENhsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI21283765
PTENhsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23418359
CDKN1Ahsa-miR-17-5pMirtarbaseexternal_infoqRT-PCR//Luciferase reporter assay//Western blot//Functional MTI18212054
CDKN1Ahsa-miR-17-5pMirtarbaseexternal_infoqRT-PCR//Western blot//Northern blot//Luciferase rFunctional MTI18493594
CDKN1Ahsa-miR-17-5pMirtarbaseexternal_infoqRT-PCR//Luciferase reporter assay//Western blotFunctional MTI20190813
CDKN1Ahsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR;OtherFunctional MTI18941111
PTPROhsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI18644370
PKD2hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI19821056
BCL2L11hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI19136465
E2F1hsa-miR-17-5pMirtarbaseexternal_infoqRT-PCRFunctional MTI (Weak)18521848
E2F1hsa-miR-17-5pMirtarbaseexternal_infoWestern blotFunctional MTI18836483
E2F1hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Northern blot//Western Functional MTI15944709
E2F1hsa-miR-17-5pMirtarbaseexternal_infoNorthern blot//qRT-PCR//Western blotFunctional MTI16940181
MAP3K12hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI19666108
RUNX1hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Reporter assay//qRT-PCRFunctional MTI17589498
APPhsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI19110058
VEGFAhsa-miR-17-5pMirtarbaseexternal_infoELISA//Luciferase reporter assayFunctional MTI18320040
MAPK9hsa-miR-17-5pMirtarbaseexternal_infoqRT-PCR//Luciferase reporter assay//Western blotFunctional MTI18700987
MAPK9hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayNon-Functional MTI21283765
TGFBR2hsa-miR-17-5pMirtarbaseexternal_infoImmunoblot//Luciferase reporter assay//Microarray/Functional MTI20940405
TNFSF12hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI19478946
MYChsa-miR-17-5pMirtarbaseexternal_infoWestern blotFunctional MTI18695042
MUC17hsa-miR-17-5pMirtarbaseexternal_infoImmunohistochemistry//Microarray//qRT-PCRFunctional MTI (Weak)20926598
BMPR2hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI19390056
CCND1hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI18695042
NCOA3hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//Northern blot//qRT-PCR/Functional MTI16940181
THBS1hsa-miR-17-5pMirtarbaseexternal_infoMicroarray//qRT-PCRNon-Functional MTI (Weak)20940405
SMAD4hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//MicroarrayNon-Functional MTI20940405
ICAM1hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayNon-Functional MTI19949084
RND3hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI22132820
TCF3hsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23492770
HSPB2hsa-miR-17-5pMirtarbaseexternal_infoWestern blotFunctional MTI20209605
HBP1hsa-miR-17-5pMirtarbaseexternal_infoReporter assayFunctional MTI20505989
SIRPAhsa-miR-17-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23562609
NCOA3hsa-miR-17-5pTarbaseexternal_infoWesternblitPOSITIVE
E2F1hsa-miR-17-5pTarbaseexternal_infoReporter GenePOSITIVE
NCOA3hsa-miR-17-5pTarbaseexternal_infoqPCRNEGATIVE
NCOA3hsa-miR-17-5pTarbaseexternal_infoNothernblot NEGATIVE
CDKN1Ahsa-miR-17-5pTarbaseexternal_infoqPCRPOSITIVE
NCOA3hsa-miR-17-5pMirecordsexternal_info{unchanged}NA16940181
VEGFAhsa-miR-17-5pMirecordsexternal_infoNANA18320040
JAK1hsa-miR-17-5pMirecordsexternal_info{changed}NA20299512
RUNX1hsa-miR-17-5pMirecordsexternal_info{unchanged}{unchanged}NA17589498
PRKD2hsa-miR-17-5pMirecordsexternal_infoNANA18700987
CCND1hsa-miR-17-5pMirecordsexternal_info{unchanged}NA18695042
VIMhsa-miR-17-5pMirecordsexternal_infoNANA19771525
BCL2hsa-miR-17-5pMirecordsexternal_info{changed}NA19666108
CCND1hsa-miR-17-5pMirecordsexternal_info{unchanged}NA19823025
BMPR2hsa-miR-17-5pMirecordsexternal_info{changed}NA19390056
NCOA3hsa-miR-17-5pOncomiRDBexternal_infoNANA23436804
CDKN1Ahsa-miR-17-5pOncomiRDBexternal_infoNANA23333058
RBL2hsa-miR-17-5pOncomiRDBexternal_infoNANA23250421
CDKN1Ahsa-miR-17-5pOncomiRDBexternal_infoNANA23059786
BCL2L11hsa-miR-17-5pOncomiRDBexternal_infoNANA23001407
RND3hsa-miR-17-5pOncomiRDBexternal_infoNANA22132820
CDKN1Ahsa-miR-17-5pOncomiRDBexternal_infoNANA21953646
CAMTA1hsa-miR-17-5pOncomiRDBexternal_infoNANA21857646
ZBTB4hsa-miR-17-5pOncomiRDBexternal_infoNANA21765466
CDKN1Ahsa-miR-17-5pOncomiRDBexternal_infoNANA20851997
HBP1hsa-miR-17-5pOncomiRDBexternal_infoNANA20505989
CXCL8hsa-miR-17-5pOncomiRDBexternal_infoNANA20406904
BCL2L11hsa-miR-17-5pOncomiRDBexternal_infoNANA18493594
BRCA1hsa-miR-17-5pOncomiRDBexternal_infoNANA19048628
CCND1hsa-miR-17-5pOncomiRDBexternal_infoNANA18695042
TP53INP1hsa-miR-17-5pOncomiRDBexternal_infoNANA22730212
VHLhsa-miR-17-5pOncomiRDBexternal_infoNANA22326755
NCOA3hsa-miR-17-5pOncomiRDBexternal_infoNANA16940181
ICAM1hsa-miR-17-3pMirtarbaseexternal_infoImmunocytochemistry//Northern blot//qRT-PCR//WesteFunctional MTI19949084
VIMhsa-miR-17-3pMirtarbaseexternal_infoqRT-PCR//Western blotFunctional MTI19771525
VIMhsa-miR-17-3pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23418359
VIMhsa-miR-17-3pMirtarbaseexternal_infoCLASHFunctional MTI (Weak)23622248
SELEhsa-miR-17-3pMirtarbaseexternal_infoLuciferase reporter assayNon-Functional MTI19949084
SOD2hsa-miR-17-3pMirtarbaseexternal_infoLuciferase reporter assay//Quantitative proteomic Functional MTI21203553
SOD2hsa-miR-17-3pOncomiRDBexternal_infoNANA21203553

Predicted Targets
Summary Value
Count of predictions:48192
Count of gene targets:15895
Count of transcripts:33303
Interacting mature miRNAs:hsa-miR-17-3p, hsa-miR-17-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENST00000385012
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl1391,350,605 - 91,350,688 (+)Ensembl
RefSeq Acc Id: NR_029487
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381391,350,605 - 91,350,688 (+)NCBI
GRCh371392,002,859 - 92,002,942 (+)ENTREZGENE
HuRef1372,598,694 - 72,598,777 (+)ENTREZGENE
CHM1_11391,971,499 - 91,971,582 (+)NCBI
T2T-CHM13v2.01390,553,181 - 90,553,264 (+)NCBI
Sequence:

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 13q14.12-31.3(chr13:44967523-92738168)x1 copy number loss See cases [RCV000050891] Chr13:44967523..92738168 [GRCh38]
Chr13:45541658..93390421 [GRCh37]
Chr13:44439658..92188422 [NCBI36]
Chr13:13q14.12-31.3		 pathogenic
GRCh38/hg38 13q22.3-32.1(chr13:78349126-94701844)x1 copy number loss See cases [RCV000051379] Chr13:78349126..94701844 [GRCh38]
Chr13:78923261..95354098 [GRCh37]
Chr13:77821262..94152099 [NCBI36]
Chr13:13q22.3-32.1		 pathogenic
GRCh38/hg38 13q31.1-34(chr13:82581008-114327173)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051380]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051380]|See cases [RCV000051380] Chr13:82581008..114327173 [GRCh38]
Chr13:83155143..115085141 [GRCh37]
Chr13:82053144..114110750 [NCBI36]
Chr13:13q31.1-34		 pathogenic
GRCh38/hg38 13q31.1-32.1(chr13:83947821-95128969)x1 copy number loss See cases [RCV000051414] Chr13:83947821..95128969 [GRCh38]
Chr13:84521956..95781223 [GRCh37]
Chr13:83419957..94579224 [NCBI36]
Chr13:13q31.1-32.1		 pathogenic
GRCh38/hg38 13q31.2-32.1(chr13:88260962-97285754)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051415]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051415]|See cases [RCV000051415] Chr13:88260962..97285754 [GRCh38]
Chr13:88913217..97938008 [GRCh37]
Chr13:87711218..96736009 [NCBI36]
Chr13:13q31.2-32.1		 pathogenic
GRCh38/hg38 13q31.2-32.3(chr13:88323009-98888644)x1 copy number loss See cases [RCV000051416] Chr13:88323009..98888644 [GRCh38]
Chr13:88975264..99540898 [GRCh37]
Chr13:87773265..98338899 [NCBI36]
Chr13:13q31.2-32.3		 pathogenic
GRCh38/hg38 13q31.3-32.1(chr13:89549510-96657834)x1 copy number loss See cases [RCV000051417] Chr13:89549510..96657834 [GRCh38]
Chr13:90201764..97310088 [GRCh37]
Chr13:88999765..96108089 [NCBI36]
Chr13:13q31.3-32.1		 pathogenic
GRCh38/hg38 13q31.1-33.2(chr13:82032938-106082542)x3 copy number gain See cases [RCV000051179] Chr13:82032938..106082542 [GRCh38]
Chr13:82607073..106734891 [GRCh37]
Chr13:81505074..105532892 [NCBI36]
Chr13:13q31.1-33.2		 pathogenic
GRCh38/hg38 13q31.3(chr13:90215412-91366486)x1 copy number loss See cases [RCV000051921] Chr13:90215412..91366486 [GRCh38]
Chr13:90867666..92018740 [GRCh37]
Chr13:89665667..90816741 [NCBI36]
Chr13:13q31.3		 uncertain significance
GRCh38/hg38 13q31.3(chr13:90973752-93097331)x1 copy number loss See cases [RCV000051922] Chr13:90973752..93097331 [GRCh38]
Chr13:91626006..93749584 [GRCh37]
Chr13:90424007..92547585 [NCBI36]
Chr13:13q31.3		 uncertain significance
GRCh38/hg38 13q12.11-34(chr13:18946182-114304628)x3 copy number gain See cases [RCV000053726] Chr13:18946182..114304628 [GRCh38]
Chr13:19520322..115070103 [GRCh37]
Chr13:18418322..114088205 [NCBI36]
Chr13:13q12.11-34		 pathogenic
GRCh38/hg38 13q12.11-34(chr13:19837395-114327173)x3 copy number gain See cases [RCV000053731] Chr13:19837395..114327173 [GRCh38]
Chr13:20411535..115085141 [GRCh37]
Chr13:19309535..114110750 [NCBI36]
Chr13:13q12.11-34		 pathogenic
GRCh38/hg38 13q11-34(chr13:18565048-114327173)x3 copy number gain See cases [RCV000053719] Chr13:18565048..114327173 [GRCh38]
Chr13:19139188..115085141 [GRCh37]
Chr13:18037188..114110750 [NCBI36]
Chr13:13q11-34		 pathogenic
GRCh38/hg38 13q11-34(chr13:18850545-114327173)x3 copy number gain See cases [RCV000053723] Chr13:18850545..114327173 [GRCh38]
Chr13:19296527..115085141 [GRCh37]
Chr13:18194527..114110750 [NCBI36]
Chr13:13q11-34		 pathogenic
GRCh38/hg38 13q13.2-34(chr13:33528097-114327173)x3 copy number gain See cases [RCV000053759] Chr13:33528097..114327173 [GRCh38]
Chr13:34102234..115085141 [GRCh37]
Chr13:33000234..114110750 [NCBI36]
Chr13:13q13.2-34		 pathogenic
GRCh38/hg38 13q14.11-34(chr13:43219125-114327314)x3 copy number gain See cases [RCV000053762] Chr13:43219125..114327314 [GRCh38]
Chr13:43793261..115085141 [GRCh37]
Chr13:42691261..114110891 [NCBI36]
Chr13:13q14.11-34		 pathogenic
GRCh38/hg38 13q14.11-34(chr13:44164751-114327173)x3 copy number gain See cases [RCV000053764] Chr13:44164751..114327173 [GRCh38]
Chr13:44738887..115085141 [GRCh37]
Chr13:43636887..114110750 [NCBI36]
Chr13:13q14.11-34		 pathogenic
GRCh38/hg38 13q14.12-34(chr13:44733046-114327173)x3 copy number gain See cases [RCV000053767] Chr13:44733046..114327173 [GRCh38]
Chr13:45307182..115085141 [GRCh37]
Chr13:44205182..114110750 [NCBI36]
Chr13:13q14.12-34		 pathogenic
GRCh38/hg38 13q22.1-34(chr13:74345951-114327314)x3 copy number gain See cases [RCV000053770] Chr13:74345951..114327314 [GRCh38]
Chr13:74920088..115085141 [GRCh37]
Chr13:73818089..114110891 [NCBI36]
Chr13:13q22.1-34		 pathogenic
GRCh38/hg38 13q31.1-34(chr13:80628584-114327173)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053772]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053772]|See cases [RCV000053772] Chr13:80628584..114327173 [GRCh38]
Chr13:81202719..115085141 [GRCh37]
Chr13:80100720..114110750 [NCBI36]
Chr13:13q31.1-34		 pathogenic
GRCh37/hg19 13q31.3(chr13:90644219-92557099)x1 copy number loss See cases [RCV000234861] Chr13:90644219..92557099 [GRCh37]
Chr13:13q31.3		 pathogenic
GRCh38/hg38 13q12.11-34(chr13:19833130-114298614)x3 copy number gain See cases [RCV000134104] Chr13:19833130..114298614 [GRCh38]
Chr13:20407270..115064089 [GRCh37]
Chr13:19305270..114082191 [NCBI36]
Chr13:13q12.11-34		 pathogenic
GRCh38/hg38 13q11-34(chr13:18445862-114327173)x1 copy number loss See cases [RCV000135610] Chr13:18445862..114327173 [GRCh38]
Chr13:19020001..115085141 [GRCh37]
Chr13:10098739..114110750 [NCBI36]
Chr13:13q11-34		 pathogenic
GRCh38/hg38 13q22.3-31.3(chr13:77061780-92460406)x1 copy number loss See cases [RCV000136886] Chr13:77061780..92460406 [GRCh38]
Chr13:77635915..93112659 [GRCh37]
Chr13:76533916..91910660 [NCBI36]
Chr13:13q22.3-31.3		 pathogenic
GRCh38/hg38 13q31.2-34(chr13:88937651-114327173)x3 copy number gain See cases [RCV000137102] Chr13:88937651..114327173 [GRCh38]
Chr13:89589905..115085141 [GRCh37]
Chr13:88387906..114110750 [NCBI36]
Chr13:13q31.2-34		 pathogenic
GRCh38/hg38 13q31.1-31.3(chr13:84005264-92784013)x1 copy number loss See cases [RCV000137272] Chr13:84005264..92784013 [GRCh38]
Chr13:84579399..93436266 [GRCh37]
Chr13:83477400..92234267 [NCBI36]
Chr13:13q31.1-31.3		 likely pathogenic
GRCh38/hg38 13q14.11-34(chr13:40942298-114340331)x1 copy number loss See cases [RCV000137893] Chr13:40942298..114340331 [GRCh38]
Chr13:41516434..115085141 [GRCh37]
Chr13:40414434..114123908 [NCBI36]
Chr13:13q14.11-34		 pathogenic
GRCh38/hg38 13q31.1-34(chr13:78999318-114327106)x3 copy number gain See cases [RCV000138742] Chr13:78999318..114327106 [GRCh38]
Chr13:79573453..115085141 [GRCh37]
Chr13:78471454..114110683 [NCBI36]
Chr13:13q31.1-34		 pathogenic
GRCh38/hg38 13q31.1-34(chr13:86788927-114340331)x1 copy number loss See cases [RCV000138340] Chr13:86788927..114340331 [GRCh38]
Chr13:87441182..115085141 [GRCh37]
Chr13:86239183..114123908 [NCBI36]
Chr13:13q31.1-34		 pathogenic
GRCh38/hg38 13q12.11-34(chr13:19833130-114327106)x3 copy number gain See cases [RCV000139078] Chr13:19833130..114327106 [GRCh38]
Chr13:20407270..115085141 [GRCh37]
Chr13:19305270..114110683 [NCBI36]
Chr13:13q12.11-34		 pathogenic
GRCh38/hg38 13q31.2-32.3(chr13:87944479-99866542)x1 copy number loss See cases [RCV000139047] Chr13:87944479..99866542 [GRCh38]
Chr13:88596734..100518796 [GRCh37]
Chr13:87394735..99316797 [NCBI36]
Chr13:13q31.2-32.3		 pathogenic
GRCh38/hg38 13q11-34(chr13:18456040-114340285)x3 copy number gain See cases [RCV000140004] Chr13:18456040..114340285 [GRCh38]
Chr13:19030180..115105760 [GRCh37]
Chr13:17928180..114123862 [NCBI36]
Chr13:13q11-34		 pathogenic
GRCh38/hg38 13q31.1-34(chr13:78964223-114340331)x3 copy number gain See cases [RCV000141248] Chr13:78964223..114340331 [GRCh38]
Chr13:79538358..115085141 [GRCh37]
Chr13:78436359..114123908 [NCBI36]
Chr13:13q31.1-34		 pathogenic
GRCh38/hg38 13q31.1-31.3(chr13:84052824-91838339)x3 copy number gain See cases [RCV000141994] Chr13:84052824..91838339 [GRCh38]
Chr13:84626959..92490593 [GRCh37]
Chr13:83524960..91288594 [NCBI36]
Chr13:13q31.1-31.3		 uncertain significance
GRCh38/hg38 13q31.1-34(chr13:83288131-114342258)x3 copy number gain See cases [RCV000141804] Chr13:83288131..114342258 [GRCh38]
Chr13:83862266..115107733 [GRCh37]
Chr13:82760267..114125835 [NCBI36]
Chr13:13q31.1-34		 pathogenic
GRCh38/hg38 13q12.11-34(chr13:19671934-114340331)x3 copy number gain See cases [RCV000142924] Chr13:19671934..114340331 [GRCh38]
Chr13:20246074..115085141 [GRCh37]
Chr13:19144074..114123908 [NCBI36]
Chr13:13q12.11-34		 pathogenic
GRCh38/hg38 13q31.3(chr13:91283077-91394459)x1 copy number loss See cases [RCV000143094] Chr13:91283077..91394459 [GRCh38]
Chr13:91935331..92046713 [GRCh37]
Chr13:90733332..90844714 [NCBI36]
Chr13:13q31.3		 pathogenic
GRCh38/hg38 13q31.3(chr13:91282882-91394459)x1 copy number loss See cases [RCV000143162] Chr13:91282882..91394459 [GRCh38]
Chr13:91935136..92046713 [GRCh37]
Chr13:90733137..90844714 [NCBI36]
Chr13:13q31.3		 pathogenic
GRCh38/hg38 13q11-34(chr13:18862146-114342258)x3 copy number gain See cases [RCV000143462] Chr13:18862146..114342258 [GRCh38]
Chr13:19436286..115107733 [GRCh37]
Chr13:18334286..114125835 [NCBI36]
Chr13:13q11-34		 pathogenic
GRCh38/hg38 13q12.11-34(chr13:19837395-114327173)x3 copy number gain See cases [RCV000148126] Chr13:19837395..114327173 [GRCh38]
Chr13:20411535..115085141 [GRCh37]
Chr13:19309535..114110750 [NCBI36]
Chr13:13q12.11-34		 pathogenic
GRCh37/hg19 13q31.2-34(chr13:89796110-115083342)x1 copy number loss See cases [RCV000240161] Chr13:89796110..115083342 [GRCh37]
Chr13:13q31.2-34		 pathogenic
GRCh37/hg19 13q12.11-34(chr13:19571503-115092569)x3 copy number gain See cases [RCV000240150] Chr13:19571503..115092569 [GRCh37]
Chr13:13q12.11-34		 pathogenic
GRCh37/hg19 13q31.3(chr13:91209639-94704856)x3 copy number gain See cases [RCV000240035] Chr13:91209639..94704856 [GRCh37]
Chr13:13q31.3		 uncertain significance
GRCh37/hg19 13q22.1-31.3(chr13:74459395-93481294)x1 copy number loss See cases [RCV000598789] Chr13:74459395..93481294 [GRCh37]
Chr13:13q22.1-31.3		 pathogenic
GRCh37/hg19 13q14.3-33.3(chr13:53551300-109850651)x1 copy number loss See cases [RCV000449272] Chr13:53551300..109850651 [GRCh37]
Chr13:13q14.3-33.3		 pathogenic
GRCh37/hg19 13q21.2-34(chr13:61424168-115107733)x3 copy number gain See cases [RCV000449118] Chr13:61424168..115107733 [GRCh37]
Chr13:13q21.2-34		 pathogenic
GRCh37/hg19 13q12.11-34(chr13:19571503-115092510) copy number gain See cases [RCV000449142] Chr13:19571503..115092510 [GRCh37]
Chr13:13q12.11-34		 pathogenic
GRCh37/hg19 13q31.1-31.3(chr13:86963003-93390362)x3 copy number gain See cases [RCV000446248] Chr13:86963003..93390362 [GRCh37]
Chr13:13q31.1-31.3		 pathogenic
GRCh37/hg19 13q31.1-34(chr13:82221361-115092569)x3 copy number gain See cases [RCV000447429] Chr13:82221361..115092569 [GRCh37]
Chr13:13q31.1-34		 pathogenic
GRCh37/hg19 13q21.1-34(chr13:56431743-115107733) copy number gain See cases [RCV000510722] Chr13:56431743..115107733 [GRCh37]
Chr13:13q21.1-34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19436286-115107733)x3 copy number gain See cases [RCV000445886] Chr13:19436286..115107733 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q31.1-33.1(chr13:81851091-102864674)x1 copy number loss See cases [RCV000448988] Chr13:81851091..102864674 [GRCh37]
Chr13:13q31.1-33.1		 pathogenic
GRCh37/hg19 13q31.2-34(chr13:88073140-115107733)x1 copy number loss See cases [RCV000448405] Chr13:88073140..115107733 [GRCh37]
Chr13:13q31.2-34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19436287-115107733) copy number gain See cases [RCV000510405] Chr13:19436287..115107733 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q21.33-34(chr13:71871468-115107733)x4 copy number gain See cases [RCV000510281] Chr13:71871468..115107733 [GRCh37]
Chr13:13q21.33-34		 pathogenic
GRCh37/hg19 13q31.1-34(chr13:80058840-115107733)x3 copy number gain See cases [RCV000510566] Chr13:80058840..115107733 [GRCh37]
Chr13:13q31.1-34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19436287-115107733)x3 copy number gain See cases [RCV000511880] Chr13:19436287..115107733 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q31.1-33.3(chr13:80572498-108719528)x1 copy number loss See cases [RCV000510890] Chr13:80572498..108719528 [GRCh37]
Chr13:13q31.1-33.3		 pathogenic
GRCh37/hg19 13q31.1-34(chr13:83435292-115107733)x3 copy number gain See cases [RCV000512605] Chr13:83435292..115107733 [GRCh37]
Chr13:13q31.1-34		 pathogenic
GRCh37/hg19 13q14.3-32.1(chr13:53932358-96586363)x3 copy number gain See cases [RCV000512571] Chr13:53932358..96586363 [GRCh37]
Chr13:13q14.3-32.1		 pathogenic
GRCh37/hg19 13q31.1-34(chr13:85176519-115107733)x3 copy number gain See cases [RCV000512242] Chr13:85176519..115107733 [GRCh37]
Chr13:13q31.1-34		 pathogenic
Single allele duplication not provided [RCV000678035] Chr13:91209639..94704856 [GRCh37]
Chr13:13q31.3		 likely pathogenic
GRCh37/hg19 13q22.3-34(chr13:78590089-115107733)x3 copy number gain not provided [RCV000683571] Chr13:78590089..115107733 [GRCh37]
Chr13:13q22.3-34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19058717-115103529)x3 copy number gain not provided [RCV000738115] Chr13:19058717..115103529 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q31.1-31.3(chr13:85005334-92461147)x1 copy number loss not provided [RCV000738268] Chr13:85005334..92461147 [GRCh37]
Chr13:13q31.1-31.3		 pathogenic
GRCh37/hg19 13q11-34(chr13:19031237-115107157)x3 copy number gain not provided [RCV000750643] Chr13:19031237..115107157 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q21.1-31.3(chr13:57058434-94684615)x1 copy number loss not provided [RCV000750731] Chr13:57058434..94684615 [GRCh37]
Chr13:13q21.1-31.3		 pathogenic
GRCh37/hg19 13q31.3(chr13:91460305-92069153)x3 copy number gain not provided [RCV001006582] Chr13:91460305..92069153 [GRCh37]
Chr13:13q31.3		 likely pathogenic
GRCh37/hg19 13q21.2-34(chr13:61775567-115107733)x3 copy number gain not provided [RCV000848025] Chr13:61775567..115107733 [GRCh37]
Chr13:13q21.2-34		 pathogenic
GRCh37/hg19 13q14.3-34(chr13:53262013-115107733)x1 copy number loss not provided [RCV001006567] Chr13:53262013..115107733 [GRCh37]
Chr13:13q14.3-34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19436286-115107733)x3 copy number gain not provided [RCV000849129] Chr13:19436286..115107733 [GRCh37]
Chr13:13q11-34		 pathogenic
NC_000013.10:g.(?_92002837)_(103343314_?)del deletion Holoprosencephaly 5 [RCV001388033] Chr13:92002837..103343314 [GRCh37]
Chr13:13q31.3-33.1		 pathogenic
GRCh37/hg19 13q11-34(chr13:19053605-115108528)x3 copy number gain See cases [RCV001353184] Chr13:19053605..115108528 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13p13-q34(chr13:1-115169878)x3 copy number gain See cases [RCV001780076] Chr13:1..115169878 [GRCh37]
Chr13:13p13-q34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19436286-114981726) copy number gain not specified [RCV002053035] Chr13:19436286..114981726 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19436286-115107733)x3 copy number gain not provided [RCV001834436] Chr13:19436286..115107733 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q14.11-33.3(chr13:42504540-108206269)x3 copy number gain not provided [RCV001829235] Chr13:42504540..108206269 [GRCh37]
Chr13:13q14.11-33.3		 pathogenic
GRCh37/hg19 13q22.3-34(chr13:78514567-115107733) copy number gain not specified [RCV002053071] Chr13:78514567..115107733 [GRCh37]
Chr13:13q22.3-34		 pathogenic
GRCh37/hg19 13q31.1-34(chr13:79370012-115107733) copy number loss not specified [RCV002053072] Chr13:79370012..115107733 [GRCh37]
Chr13:13q31.1-34		 pathogenic
GRCh37/hg19 13q11-34(chr13:19436286-115107733) copy number gain not specified [RCV002053036] Chr13:19436286..115107733 [GRCh37]
Chr13:13q11-34		 pathogenic
GRCh37/hg19 13q21.2-34(chr13:61424168-115107733) copy number gain not specified [RCV002053063] Chr13:61424168..115107733 [GRCh37]
Chr13:13q21.2-34		 pathogenic
GRCh37/hg19 13q31.1-34(chr13:85037147-115107733) copy number gain not specified [RCV002053073] Chr13:85037147..115107733 [GRCh37]
Chr13:13q31.1-34		 pathogenic
GRCh37/hg19 13q31.2-34(chr13:88073140-115107733) copy number loss not specified [RCV002053074] Chr13:88073140..115107733 [GRCh37]
Chr13:13q31.2-34		 pathogenic

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:31547 AgrOrtholog
COSMIC MIR17 COSMIC
Ensembl Genes ENSG00000284536 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000385012 ENTREZGENE
GTEx ENSG00000284536 GTEx
HGNC ID HGNC:31547 ENTREZGENE
Human Proteome Map MIR17 Human Proteome Map
miRBase MI0000071 ENTREZGENE
NCBI Gene 406952 ENTREZGENE
OMIM 609416 OMIM
PharmGKB PA164722520 PharmGKB
RNAcentral URS00002075FA RNACentral
  URS000032AA22 RNACentral
  URS00004636A3 RNACentral