ARHGAP15 (Rho GTPase activating protein 15) - Rat Genome Database

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Gene: ARHGAP15 (Rho GTPase activating protein 15) Homo sapiens
Analyze
Symbol: ARHGAP15
Name: Rho GTPase activating protein 15
RGD ID: 1348610
HGNC Page HGNC:21030
Description: Enables GTPase activator activity. Acts upstream of or within regulation of cell shape. Located in nucleoplasm and plasma membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: BM046; rho GTPase-activating protein 15; rho-type GTPase-activating protein 15
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382143,129,419 - 143,768,352 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2143,091,362 - 143,768,352 (+)EnsemblGRCh38hg38GRCh38
GRCh372143,886,988 - 144,525,921 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362143,603,433 - 144,242,391 (+)NCBINCBI36Build 36hg18NCBI36
Build 342143,720,694 - 144,359,652NCBI
Celera2137,599,271 - 138,238,118 (+)NCBICelera
Cytogenetic Map2q22.2-q22.3NCBI
HuRef2135,878,185 - 136,517,347 (+)NCBIHuRef
CHM1_12143,891,883 - 144,531,020 (+)NCBICHM1_1
T2T-CHM13v2.02143,577,714 - 144,216,567 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IBA,IEA)
cytosol  (TAS)
membrane  (IEA)
nucleoplasm  (IDA)
plasma membrane  (IDA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8125298   PMID:11042152   PMID:12477932   PMID:12650940   PMID:15342556   PMID:15459234   PMID:15761153   PMID:18482256   PMID:18541383   PMID:19197348   PMID:20379614   PMID:20468071  
PMID:21244100   PMID:21297076   PMID:21873635   PMID:23455924   PMID:23760270   PMID:24556642   PMID:25343990   PMID:27862679   PMID:28514442   PMID:28585551   PMID:29534468   PMID:29867200  
PMID:30196744   PMID:30397336   PMID:31298335   PMID:33251042   PMID:33961781   PMID:34225052   PMID:35271311  


Genomics

Comparative Map Data
ARHGAP15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382143,129,419 - 143,768,352 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2143,091,362 - 143,768,352 (+)EnsemblGRCh38hg38GRCh38
GRCh372143,886,988 - 144,525,921 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362143,603,433 - 144,242,391 (+)NCBINCBI36Build 36hg18NCBI36
Build 342143,720,694 - 144,359,652NCBI
Celera2137,599,271 - 138,238,118 (+)NCBICelera
Cytogenetic Map2q22.2-q22.3NCBI
HuRef2135,878,185 - 136,517,347 (+)NCBIHuRef
CHM1_12143,891,883 - 144,531,020 (+)NCBICHM1_1
T2T-CHM13v2.02143,577,714 - 144,216,567 (+)NCBIT2T-CHM13v2.0
Arhgap15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39243,638,786 - 44,285,965 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl243,638,836 - 44,285,965 (+)EnsemblGRCm39 Ensembl
GRCm38243,748,798 - 44,395,953 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl243,748,824 - 44,395,953 (+)EnsemblGRCm38mm10GRCm38
MGSCv37243,604,344 - 44,243,143 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36243,570,836 - 44,209,632 (+)NCBIMGSCv36mm8
Celera245,470,136 - 46,103,622 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map226.13NCBI
Arhgap15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8348,382,945 - 49,002,213 (+)NCBIGRCr8
mRatBN7.2327,989,368 - 28,592,722 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl327,989,633 - 28,600,265 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx331,386,432 - 31,990,702 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0339,971,464 - 40,575,746 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0337,790,180 - 38,394,454 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0328,626,987 - 29,236,225 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl328,627,084 - 29,236,219 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0333,831,379 - 34,442,272 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4324,256,620 - 24,389,618 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1324,152,991 - 24,765,169 (+)NCBI
Celera326,304,736 - 26,903,806 (+)NCBICelera
Cytogenetic Map3q12NCBI
Arhgap15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554409,590,685 - 10,189,937 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554409,591,173 - 10,182,086 (+)NCBIChiLan1.0ChiLan1.0
ARHGAP15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21331,134,907 - 31,774,416 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B31,149,867 - 31,789,384 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B16,067,081 - 16,706,372 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B147,218,310 - 147,855,697 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B147,217,528 - 147,855,517 (+)Ensemblpanpan1.1panPan2
ARHGAP15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11945,208,212 - 45,815,646 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1945,208,671 - 45,831,652 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1945,460,560 - 46,068,711 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01946,665,689 - 47,274,594 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1946,666,230 - 47,274,595 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11945,324,757 - 45,933,236 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01945,455,690 - 46,065,090 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01946,850,717 - 47,460,481 (+)NCBIUU_Cfam_GSD_1.0
Arhgap15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303108,063,480 - 108,665,504 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646932,951,231 - 33,528,407 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646933,203,456 - 33,554,167 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARHGAP15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl158,192,607 - 8,811,795 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1158,192,599 - 8,811,794 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2159,017,681 - 9,571,345 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARHGAP15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11028,493,123 - 29,123,849 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1028,519,775 - 29,124,579 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040170,443,744 - 171,077,092 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arhgap15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473242,865,128 - 43,481,731 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473242,865,010 - 43,482,670 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ARHGAP15
87 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2q22.1-22.3(chr2:140186521-146528244)x1 copy number loss See cases [RCV000051018] Chr2:140186521..146528244 [GRCh38]
Chr2:140944090..147285812 [GRCh37]
Chr2:140660560..147002282 [NCBI36]
Chr2:2q22.1-22.3
pathogenic
GRCh38/hg38 2q22.2-22.3(chr2:141666537-147845662)x1 copy number loss See cases [RCV000054086] Chr2:141666537..147845662 [GRCh38]
Chr2:142424106..148603231 [GRCh37]
Chr2:142140576..148319701 [NCBI36]
Chr2:2q22.2-22.3
pathogenic
NM_018460.3(ARHGAP15):c.355G>A (p.Glu119Lys) single nucleotide variant Malignant melanoma [RCV000060345] Chr2:143228639 [GRCh38]
Chr2:143986208 [GRCh37]
Chr2:143702678 [NCBI36]
Chr2:2q22.2
not provided
NM_018460.3(ARHGAP15):c.170C>T (p.Ser57Phe) single nucleotide variant Malignant melanoma [RCV000065099] Chr2:143202138 [GRCh38]
Chr2:143959707 [GRCh37]
Chr2:143676177 [NCBI36]
Chr2:2q22.2
not provided
NM_018460.3(ARHGAP15):c.234+620A>G single nucleotide variant Lung cancer [RCV000091498] Chr2:143202822 [GRCh38]
Chr2:143960391 [GRCh37]
Chr2:2q22.2
uncertain significance
NM_018460.3(ARHGAP15):c.474+86541G>A single nucleotide variant Lung cancer [RCV000091499] Chr2:143337141 [GRCh38]
Chr2:144094710 [GRCh37]
Chr2:2q22.2
uncertain significance
NM_018460.3(ARHGAP15):c.475-83608T>C single nucleotide variant Lung cancer [RCV000091500] Chr2:143351993 [GRCh38]
Chr2:144109562 [GRCh37]
Chr2:2q22.2
uncertain significance
NM_018460.3(ARHGAP15):c.475-27933T>A single nucleotide variant Lung cancer [RCV000091501] Chr2:143407668 [GRCh38]
Chr2:144165237 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.704-4471A>G single nucleotide variant Lung cancer [RCV000091502] Chr2:143482902 [GRCh38]
Chr2:144240471 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.826+3974T>C single nucleotide variant Lung cancer [RCV000091503] Chr2:143491469 [GRCh38]
Chr2:144249038 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.1004-27015A>G single nucleotide variant Lung cancer [RCV000091504] Chr2:143597118 [GRCh38]
Chr2:144354687 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.1004-11362C>A single nucleotide variant Lung cancer [RCV000091505] Chr2:143612771 [GRCh38]
Chr2:144370340 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.1138+22590A>G single nucleotide variant Lung cancer [RCV000091506] Chr2:143646857 [GRCh38]
Chr2:144404426 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.1139-5396G>C single nucleotide variant Lung cancer [RCV000091507] Chr2:143698023 [GRCh38]
Chr2:144455592 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.1244+2777A>G single nucleotide variant Lung cancer [RCV000091508] Chr2:143706301 [GRCh38]
Chr2:144463870 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.3(ARHGAP15):c.1245-17783G>C single nucleotide variant Lung cancer [RCV000091509] Chr2:143750206 [GRCh38]
Chr2:144507775 [GRCh37]
Chr2:2q22.3
uncertain significance
GRCh38/hg38 2q22.1-22.3(chr2:136937358-146681810)x1 copy number loss See cases [RCV000137506] Chr2:136937358..146681810 [GRCh38]
Chr2:137694928..147439378 [GRCh37]
Chr2:137411398..147155848 [NCBI36]
Chr2:2q22.1-22.3
pathogenic
GRCh38/hg38 2q22.2-22.3(chr2:143294079-147713830)x1 copy number loss See cases [RCV000139128] Chr2:143294079..147713830 [GRCh38]
Chr2:144051648..148471399 [GRCh37]
Chr2:143768118..148187869 [NCBI36]
Chr2:2q22.2-22.3
pathogenic
GRCh38/hg38 2q22.2-22.3(chr2:143328755-143590337)x1 copy number loss See cases [RCV000143523] Chr2:143328755..143590337 [GRCh38]
Chr2:144086324..144347906 [GRCh37]
Chr2:143802794..144064376 [NCBI36]
Chr2:2q22.2-22.3
uncertain significance
GRCh38/hg38 2q22.2(chr2:142197989-143208649)x3 copy number gain See cases [RCV000143645] Chr2:142197989..143208649 [GRCh38]
Chr2:142955558..143966218 [GRCh37]
Chr2:142672028..143682688 [NCBI36]
Chr2:2q22.2
likely benign|uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q22.1-22.3(chr2:138578298-144874187)x1 copy number loss See cases [RCV000449099] Chr2:138578298..144874187 [GRCh37]
Chr2:2q22.1-22.3
likely pathogenic
Single allele duplication MBD5 associated neurodevelopmental disorder [RCV000454618] Chr2:140621941..149324662 [GRCh37]
Chr2:2q22.1-23.1
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
Single allele deletion not provided [RCV000714264] Chr2:40608411..146900718 [GRCh37]
Chr2:2p22.1-q22.3
likely pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
NM_018460.4(ARHGAP15):c.749G>A (p.Arg250Gln) single nucleotide variant Inborn genetic diseases [RCV003247992] Chr2:143487418 [GRCh38]
Chr2:144244987 [GRCh37]
Chr2:2q22.3
uncertain significance
GRCh37/hg19 2q12.1-24.3(chr2:104172062-168223828)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626436] Chr2:104172062..168223828 [GRCh37]
Chr2:2q12.1-24.3
drug response
GRCh37/hg19 2q22.3(chr2:144214631-144709343)x3 copy number gain not provided [RCV000753154] Chr2:144214631..144709343 [GRCh37]
Chr2:2q22.3
benign
GRCh37/hg19 2q22.2(chr2:144077823-144078067)x0 copy number loss not provided [RCV000753152] Chr2:144077823..144078067 [GRCh37]
Chr2:2q22.2
benign
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q22.2(chr2:144077717-144078067)x0 copy number loss not provided [RCV000753151] Chr2:144077717..144078067 [GRCh37]
Chr2:2q22.2
benign
GRCh37/hg19 2q22.2(chr2:144077823-144078170)x0 copy number loss not provided [RCV000753153] Chr2:144077823..144078170 [GRCh37]
Chr2:2q22.2
benign
GRCh37/hg19 2q22.2-22.3(chr2:143192287-144325954)x3 copy number gain not provided [RCV000849947] Chr2:143192287..144325954 [GRCh37]
Chr2:2q22.2-22.3
uncertain significance
NM_018460.4(ARHGAP15):c.1225C>T (p.Leu409Phe) single nucleotide variant Inborn genetic diseases [RCV003290521] Chr2:143703505 [GRCh38]
Chr2:144461074 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.475-4G>T single nucleotide variant not provided [RCV000954385] Chr2:143435597 [GRCh38]
Chr2:144193166 [GRCh37]
Chr2:2q22.3
likely benign
Single allele deletion Mowat-Wilson syndrome [RCV001250753] Chr2:137639637..146827604 [GRCh37]
Chr2:2q22.1-22.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:1-243199373) copy number gain Mosaic trisomy 2 [RCV002280628] Chr2:1..243199373 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2q21.3-23.3(chr2:136473383-152727396) copy number gain Global developmental delay [RCV001352659] Chr2:136473383..152727396 [GRCh37]
Chr2:2q21.3-23.3
pathogenic
GRCh37/hg19 2q13-22.3(chr2:111484468-146333604)x3 copy number gain not provided [RCV001832896] Chr2:111484468..146333604 [GRCh37]
Chr2:2q13-22.3
pathogenic
GRCh37/hg19 2q22.2-23.3(chr2:142409401-152680804)x3 copy number gain not provided [RCV001834428] Chr2:142409401..152680804 [GRCh37]
Chr2:2q22.2-23.3
pathogenic
GRCh37/hg19 2q22.2-23.3(chr2:143258712-152867819) copy number loss not specified [RCV002053238] Chr2:143258712..152867819 [GRCh37]
Chr2:2q22.2-23.3
pathogenic
GRCh37/hg19 2q22.1-22.3(chr2:138578298-144874187) copy number loss not specified [RCV002053235] Chr2:138578298..144874187 [GRCh37]
Chr2:2q22.1-22.3
likely pathogenic
GRCh37/hg19 2q13-22.3(chr2:112475655-145691999)x3 copy number gain 2q13q22.3 microduplication syndrome [RCV002226436] Chr2:112475655..145691999 [GRCh37]
Chr2:2q13-22.3
pathogenic
GRCh37/hg19 2q22.3(chr2:144192888-144248006)x1 copy number loss not provided [RCV002474814] Chr2:144192888..144248006 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.1199C>T (p.Pro400Leu) single nucleotide variant Inborn genetic diseases [RCV002969184] Chr2:143703479 [GRCh38]
Chr2:144461048 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.1364A>G (p.Gln455Arg) single nucleotide variant Inborn genetic diseases [RCV002772707] Chr2:143768108 [GRCh38]
Chr2:144525677 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.1280C>T (p.Thr427Met) single nucleotide variant Inborn genetic diseases [RCV002682429] Chr2:143768024 [GRCh38]
Chr2:144525593 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.752T>C (p.Val251Ala) single nucleotide variant Inborn genetic diseases [RCV002779207] Chr2:143487421 [GRCh38]
Chr2:144244990 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.637A>G (p.Thr213Ala) single nucleotide variant Inborn genetic diseases [RCV002694253] Chr2:143436976 [GRCh38]
Chr2:144194545 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.1159A>G (p.Arg387Gly) single nucleotide variant Inborn genetic diseases [RCV002693469] Chr2:143703439 [GRCh38]
Chr2:144461008 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.1354A>G (p.Met452Val) single nucleotide variant Inborn genetic diseases [RCV002782081] Chr2:143768098 [GRCh38]
Chr2:144525667 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.163C>A (p.Pro55Thr) single nucleotide variant Inborn genetic diseases [RCV002739672] Chr2:143155653 [GRCh38]
Chr2:143913222 [GRCh37]
Chr2:2q22.2
uncertain significance
NM_018460.4(ARHGAP15):c.1048G>A (p.Val350Ile) single nucleotide variant Inborn genetic diseases [RCV002844819] Chr2:143624177 [GRCh38]
Chr2:144381746 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.52C>T (p.Arg18Cys) single nucleotide variant Inborn genetic diseases [RCV002911388] Chr2:143155542 [GRCh38]
Chr2:143913111 [GRCh37]
Chr2:2q22.2
uncertain significance
NM_018460.4(ARHGAP15):c.310A>G (p.Thr104Ala) single nucleotide variant Inborn genetic diseases [RCV002911846] Chr2:143228594 [GRCh38]
Chr2:143986163 [GRCh37]
Chr2:2q22.2
uncertain significance
NM_018460.4(ARHGAP15):c.534G>C (p.Leu178Phe) single nucleotide variant Inborn genetic diseases [RCV002891763] Chr2:143435660 [GRCh38]
Chr2:144193229 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.497A>G (p.Glu166Gly) single nucleotide variant Inborn genetic diseases [RCV002929329] Chr2:143435623 [GRCh38]
Chr2:144193192 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.856G>A (p.Val286Met) single nucleotide variant Inborn genetic diseases [RCV002955400] Chr2:143519295 [GRCh38]
Chr2:144276864 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.1319G>A (p.Arg440Gln) single nucleotide variant Inborn genetic diseases [RCV003008686] Chr2:143768063 [GRCh38]
Chr2:144525632 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.499T>C (p.Phe167Leu) single nucleotide variant Inborn genetic diseases [RCV002896193] Chr2:143435625 [GRCh38]
Chr2:144193194 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.600A>T (p.Arg200Ser) single nucleotide variant Inborn genetic diseases [RCV003198114] Chr2:143436939 [GRCh38]
Chr2:144194508 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.283G>A (p.Gly95Arg) single nucleotide variant Inborn genetic diseases [RCV003186069] Chr2:143216432 [GRCh38]
Chr2:143974001 [GRCh37]
Chr2:2q22.2
uncertain significance
NM_018460.4(ARHGAP15):c.1372A>G (p.Ile458Val) single nucleotide variant Inborn genetic diseases [RCV003350032] Chr2:143768116 [GRCh38]
Chr2:144525685 [GRCh37]
Chr2:2q22.3
uncertain significance
NM_018460.4(ARHGAP15):c.474+1G>A single nucleotide variant not provided [RCV003429287] Chr2:143250601 [GRCh38]
Chr2:144008170 [GRCh37]
Chr2:2q22.2
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2163
Count of miRNA genes:1086
Interacting mature miRNAs:1323
Transcripts:ENST00000295095, ENST00000409869, ENST00000419455, ENST00000460776, ENST00000469117, ENST00000473426, ENST00000474474, ENST00000548242, ENST00000548800, ENST00000548929, ENST00000549060, ENST00000549436, ENST00000552289, ENST00000552641
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D2S122  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,171,470 - 144,171,563UniSTSGRCh37
Build 362143,887,940 - 143,888,033RGDNCBI36
Celera2137,883,798 - 137,883,895RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,163,023 - 136,163,128UniSTS
Marshfield Genetic Map2149.89RGD
Marshfield Genetic Map2149.89UniSTS
Genethon Genetic Map2154.7UniSTS
Whitehead-YAC Contig Map2 UniSTS
SHGC-23101  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372143,980,410 - 143,980,502UniSTSGRCh37
Build 362143,696,880 - 143,696,972RGDNCBI36
Celera2137,692,751 - 137,692,843RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2135,971,635 - 135,971,727UniSTS
TNG Radiation Hybrid Map277400.0UniSTS
RH79251  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,276,849 - 144,276,982UniSTSGRCh37
Build 362143,993,319 - 143,993,452RGDNCBI36
Celera2137,989,286 - 137,989,419RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,268,355 - 136,268,488UniSTS
NCBI RH Map21043.4UniSTS
RH93106  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,441,827 - 144,441,955UniSTSGRCh37
Build 362144,158,297 - 144,158,425RGDNCBI36
Celera2138,154,008 - 138,154,136RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,433,235 - 136,433,363UniSTS
GeneMap99-GB4 RH Map2494.84UniSTS
RH92102  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372143,919,723 - 143,919,986UniSTSGRCh37
Build 362143,636,193 - 143,636,456RGDNCBI36
Celera2137,632,043 - 137,632,306RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2135,910,934 - 135,911,197UniSTS
GeneMap99-GB4 RH Map2495.46UniSTS
RH120577  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,211,404 - 144,211,684UniSTSGRCh37
Build 362143,927,874 - 143,928,154RGDNCBI36
Celera2137,923,732 - 137,924,012RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,202,796 - 136,203,076UniSTS
TNG Radiation Hybrid Map282933.0UniSTS
RH120252  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372143,893,953 - 143,894,224UniSTSGRCh37
Build 362143,610,423 - 143,610,694RGDNCBI36
Celera2137,606,280 - 137,606,551RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2135,885,214 - 135,885,485UniSTS
TNG Radiation Hybrid Map277430.0UniSTS
RH119028  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,488,936 - 144,489,209UniSTSGRCh37
Build 362144,205,406 - 144,205,679RGDNCBI36
Celera2138,201,136 - 138,201,409RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,480,376 - 136,480,649UniSTS
TNG Radiation Hybrid Map283027.0UniSTS
SHGC-111811  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,338,424 - 144,338,734UniSTSGRCh37
Build 362144,054,894 - 144,055,204RGDNCBI36
Celera2138,050,686 - 138,050,996RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,329,886 - 136,330,196UniSTS
TNG Radiation Hybrid Map282986.0UniSTS
SHGC-107502  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,518,935 - 144,519,206UniSTSGRCh37
Build 362144,235,405 - 144,235,676RGDNCBI36
Celera2138,231,132 - 138,231,403RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,510,373 - 136,510,644UniSTS
TNG Radiation Hybrid Map283048.0UniSTS
D2S1738  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,525,122 - 144,525,275UniSTSGRCh37
Build 362144,241,592 - 144,241,745RGDNCBI36
Celera2138,237,319 - 138,237,472RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,516,548 - 136,516,701UniSTS
Whitehead-RH Map2777.8UniSTS
Whitehead-YAC Contig Map2 UniSTS
SHGC-23090  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372143,980,208 - 143,980,415UniSTSGRCh37
Build 362143,696,678 - 143,696,885RGDNCBI36
Celera2137,692,549 - 137,692,756RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2135,971,433 - 135,971,640UniSTS
TNG Radiation Hybrid Map277404.0UniSTS
REN48866  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,285,594 - 108,285,820UniSTSGRCh37
GRCh372144,212,753 - 144,212,926UniSTSGRCh37
Build 362143,929,223 - 143,929,396RGDNCBI36
Celera2137,925,081 - 137,925,254RGD
Celera6109,032,081 - 109,032,307UniSTS
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,204,145 - 136,204,318UniSTS
HuRef6105,854,493 - 105,854,719UniSTS
STS-AA040807  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,525,641 - 144,525,861UniSTSGRCh37
Build 362144,242,111 - 144,242,331RGDNCBI36
Celera2138,237,838 - 138,238,058RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,517,067 - 136,517,287UniSTS
NCBI RH Map21043.4UniSTS
D2S1308  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,405,372 - 144,405,610UniSTSGRCh37
Build 362144,121,842 - 144,122,080RGDNCBI36
Celera2138,117,583 - 138,117,821RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,396,796 - 136,397,034UniSTS
TNG Radiation Hybrid Map283007.0UniSTS
Stanford-G3 RH Map25816.0UniSTS
Whitehead-YAC Contig Map2 UniSTS
NCBI RH Map21043.4UniSTS
RH35973  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,525,700 - 144,525,897UniSTSGRCh37
Build 362144,242,170 - 144,242,367RGDNCBI36
Celera2138,237,897 - 138,238,094RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,517,126 - 136,517,323UniSTS
GeneMap99-GB4 RH Map2494.84UniSTS
SHGC-64284  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh372144,525,656 - 144,525,847UniSTSGRCh37
Build 362144,242,126 - 144,242,317RGDNCBI36
Celera2138,237,853 - 138,238,044RGD
Cytogenetic Map2q22.2-q22.3UniSTS
HuRef2136,517,082 - 136,517,273UniSTS
TNG Radiation Hybrid Map283042.0UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 129 757 23 1 1727 1 631 26 591 10 49 149 48 604
Low 2152 2051 1507 575 200 421 2607 1310 1072 327 1162 1241 154 1155 1373 2 1
Below cutoff 101 179 190 44 22 39 1101 850 2037 66 215 158 14 1 811 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_018460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011511484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017004499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017004500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017004501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047445109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047445110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047445111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047445112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047445113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047445114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054343016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001738850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007078554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC013437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC079584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC079793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC092652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC096558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC098857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC109639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF212222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF217507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF217522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK226014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK303490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY219338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC016701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP299206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000295095   ⟹   ENSP00000295095
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,129,419 - 143,768,352 (+)Ensembl
RefSeq Acc Id: ENST00000409869   ⟹   ENSP00000386560
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,091,362 - 143,238,352 (+)Ensembl
RefSeq Acc Id: ENST00000419455   ⟹   ENSP00000390310
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,556,408 - 143,624,267 (+)Ensembl
RefSeq Acc Id: ENST00000460776
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,193,384 - 143,435,699 (+)Ensembl
RefSeq Acc Id: ENST00000469117
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,247,290 - 143,437,042 (+)Ensembl
RefSeq Acc Id: ENST00000474474
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,228,098 - 143,435,699 (+)Ensembl
RefSeq Acc Id: ENST00000548242
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,435,266 - 143,533,317 (+)Ensembl
RefSeq Acc Id: ENST00000548800
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,435,264 - 143,437,103 (+)Ensembl
RefSeq Acc Id: ENST00000548929
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,435,314 - 143,487,479 (+)Ensembl
RefSeq Acc Id: ENST00000549060
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,706,411 - 143,768,348 (+)Ensembl
RefSeq Acc Id: ENST00000549436
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,519,278 - 143,703,960 (+)Ensembl
RefSeq Acc Id: ENST00000552289
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,487,363 - 143,519,485 (+)Ensembl
RefSeq Acc Id: ENST00000552641
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl2143,129,413 - 143,437,357 (+)Ensembl
RefSeq Acc Id: NM_018460   ⟹   NP_060930
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,129,419 - 143,768,352 (+)NCBI
GRCh372143,886,899 - 144,525,921 (+)RGD
Build 362143,603,433 - 144,242,391 (+)NCBI Archive
Celera2137,599,271 - 138,238,118 (+)RGD
HuRef2135,878,185 - 136,517,347 (+)ENTREZGENE
CHM1_12143,891,883 - 144,531,020 (+)NCBI
T2T-CHM13v2.02143,577,714 - 144,216,567 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511482   ⟹   XP_011509784
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,155,478 - 143,734,731 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511483   ⟹   XP_011509785
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,247,240 - 143,768,352 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011511484   ⟹   XP_011509786
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,155,478 - 143,614,447 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017004500   ⟹   XP_016859989
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,129,419 - 143,768,352 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024453000   ⟹   XP_024308768
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,435,196 - 143,768,352 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047445109   ⟹   XP_047301065
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,155,478 - 143,705,813 (+)NCBI
RefSeq Acc Id: XM_047445110   ⟹   XP_047301066
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,434,849 - 143,768,352 (+)NCBI
RefSeq Acc Id: XM_047445111   ⟹   XP_047301067
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,218,301 - 143,768,352 (+)NCBI
RefSeq Acc Id: XM_047445112   ⟹   XP_047301068
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,155,478 - 143,536,342 (+)NCBI
RefSeq Acc Id: XM_047445113   ⟹   XP_047301069
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,155,478 - 143,584,135 (+)NCBI
RefSeq Acc Id: XM_047445114   ⟹   XP_047301070
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,129,419 - 143,536,344 (+)NCBI
RefSeq Acc Id: XM_054343007   ⟹   XP_054198982
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,603,681 - 144,154,809 (+)NCBI
RefSeq Acc Id: XM_054343008   ⟹   XP_054198983
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,577,714 - 144,216,567 (+)NCBI
RefSeq Acc Id: XM_054343009   ⟹   XP_054198984
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,603,681 - 144,182,954 (+)NCBI
RefSeq Acc Id: XM_054343010   ⟹   XP_054198985
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,695,433 - 144,216,567 (+)NCBI
RefSeq Acc Id: XM_054343011   ⟹   XP_054198986
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,883,042 - 144,216,567 (+)NCBI
RefSeq Acc Id: XM_054343012   ⟹   XP_054198987
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,672,265 - 144,216,567 (+)NCBI
RefSeq Acc Id: XM_054343013   ⟹   XP_054198988
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,603,681 - 143,984,565 (+)NCBI
RefSeq Acc Id: XM_054343014   ⟹   XP_054198989
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,603,681 - 144,032,395 (+)NCBI
RefSeq Acc Id: XM_054343015   ⟹   XP_054198990
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,577,714 - 143,984,567 (+)NCBI
RefSeq Acc Id: XM_054343016   ⟹   XP_054198991
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,883,389 - 144,216,567 (+)NCBI
RefSeq Acc Id: XR_007078554
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,155,478 - 143,768,352 (+)NCBI
RefSeq Acc Id: XR_008486458
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.02143,603,681 - 144,216,567 (+)NCBI
Protein Sequences
Protein RefSeqs NP_060930 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509784 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509785 (Get FASTA)   NCBI Sequence Viewer  
  XP_011509786 (Get FASTA)   NCBI Sequence Viewer  
  XP_016859989 (Get FASTA)   NCBI Sequence Viewer  
  XP_024308768 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301065 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301066 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301067 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301068 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301069 (Get FASTA)   NCBI Sequence Viewer  
  XP_047301070 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198982 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198983 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198984 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198985 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198986 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198987 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198988 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198989 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198990 (Get FASTA)   NCBI Sequence Viewer  
  XP_054198991 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF67618 (Get FASTA)   NCBI Sequence Viewer  
  AAF67633 (Get FASTA)   NCBI Sequence Viewer  
  AAF87324 (Get FASTA)   NCBI Sequence Viewer  
  AAH16701 (Get FASTA)   NCBI Sequence Viewer  
  AAH38976 (Get FASTA)   NCBI Sequence Viewer  
  AAO34684 (Get FASTA)   NCBI Sequence Viewer  
  AAX82009 (Get FASTA)   NCBI Sequence Viewer  
  AAX93158 (Get FASTA)   NCBI Sequence Viewer  
  AAX93160 (Get FASTA)   NCBI Sequence Viewer  
  AAX93245 (Get FASTA)   NCBI Sequence Viewer  
  AAY14811 (Get FASTA)   NCBI Sequence Viewer  
  AAY24215 (Get FASTA)   NCBI Sequence Viewer  
  BAG64525 (Get FASTA)   NCBI Sequence Viewer  
  EAX11587 (Get FASTA)   NCBI Sequence Viewer  
  EAX11588 (Get FASTA)   NCBI Sequence Viewer  
  EAX11589 (Get FASTA)   NCBI Sequence Viewer  
  EAX11590 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000295095
  ENSP00000295095.6
  ENSP00000386560.1
GenBank Protein Q53QZ3 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_060930   ⟸   NM_018460
- UniProtKB: Q9NZ77 (UniProtKB/Swiss-Prot),   Q9NRL8 (UniProtKB/Swiss-Prot),   Q8IXX1 (UniProtKB/Swiss-Prot),   Q86WP1 (UniProtKB/Swiss-Prot),   Q6PJE6 (UniProtKB/Swiss-Prot),   Q584N9 (UniProtKB/Swiss-Prot),   Q53SX9 (UniProtKB/Swiss-Prot),   Q53RT6 (UniProtKB/Swiss-Prot),   Q53RD7 (UniProtKB/Swiss-Prot),   Q53R36 (UniProtKB/Swiss-Prot),   Q9NZ91 (UniProtKB/Swiss-Prot),   Q53QZ3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011509784   ⟸   XM_011511482
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011509786   ⟸   XM_011511484
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011509785   ⟸   XM_011511483
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_016859989   ⟸   XM_017004500
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_024308768   ⟸   XM_024453000
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: ENSP00000295095   ⟸   ENST00000295095
RefSeq Acc Id: ENSP00000390310   ⟸   ENST00000419455
RefSeq Acc Id: ENSP00000386560   ⟸   ENST00000409869
RefSeq Acc Id: XP_047301070   ⟸   XM_047445114
- Peptide Label: isoform X10
RefSeq Acc Id: XP_047301065   ⟸   XM_047445109
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047301069   ⟸   XM_047445113
- Peptide Label: isoform X9
RefSeq Acc Id: XP_047301068   ⟸   XM_047445112
- Peptide Label: isoform X8
RefSeq Acc Id: XP_047301067   ⟸   XM_047445111
- Peptide Label: isoform X6
RefSeq Acc Id: XP_047301066   ⟸   XM_047445110
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054198983   ⟸   XM_054343008
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054198990   ⟸   XM_054343015
- Peptide Label: isoform X10
RefSeq Acc Id: XP_054198984   ⟸   XM_054343009
- Peptide Label: isoform X3
RefSeq Acc Id: XP_054198982   ⟸   XM_054343007
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054198989   ⟸   XM_054343014
- Peptide Label: isoform X9
RefSeq Acc Id: XP_054198988   ⟸   XM_054343013
- Peptide Label: isoform X8
RefSeq Acc Id: XP_054198987   ⟸   XM_054343012
- Peptide Label: isoform X6
RefSeq Acc Id: XP_054198985   ⟸   XM_054343010
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054198986   ⟸   XM_054343011
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054198991   ⟸   XM_054343016
- Peptide Label: isoform X11
Protein Domains
PH   Rho-GAP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q53QZ3-F1-model_v2 AlphaFold Q53QZ3 1-475 view protein structure

Promoters
RGD ID:6861676
Promoter ID:EPDNEW_H4003
Type:initiation region
Name:ARHGAP15_1
Description:Rho GTPase activating protein 15
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H4002  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh382143,129,419 - 143,129,479EPDNEW
RGD ID:6796791
Promoter ID:HG_KWN:35267
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000254793
Position:
Human AssemblyChrPosition (strand)Source
Build 362143,602,896 - 143,603,396 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:21030 AgrOrtholog
COSMIC ARHGAP15 COSMIC
Ensembl Genes ENSG00000075884 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000295095 ENTREZGENE
  ENST00000295095.11 UniProtKB/Swiss-Prot
  ENST00000409869.5 UniProtKB/TrEMBL
Gene3D-CATH 1.10.555.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000075884 GTEx
HGNC ID HGNC:21030 ENTREZGENE
Human Proteome Map ARHGAP15 Human Proteome Map
InterPro PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot
  RhoGAP_dom UniProtKB/Swiss-Prot
KEGG Report hsa:55843 UniProtKB/Swiss-Prot
NCBI Gene 55843 ENTREZGENE
OMIM 610578 OMIM
PANTHER RHO GTPASE-ACTIVATING PROTEIN 15 UniProtKB/Swiss-Prot
  RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN UniProtKB/Swiss-Prot
Pfam PF00169 UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot
PharmGKB PA134938065 PharmGKB
PROSITE PH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RHOGAP UniProtKB/Swiss-Prot
SMART RhoGAP UniProtKB/Swiss-Prot
  SM00233 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48350 UniProtKB/Swiss-Prot
UniProt B8ZZK0_HUMAN UniProtKB/TrEMBL
  Q53QZ3 ENTREZGENE
  Q53R36 ENTREZGENE
  Q53RD7 ENTREZGENE
  Q53RT6 ENTREZGENE
  Q53SX9 ENTREZGENE
  Q584N9 ENTREZGENE
  Q6PJE6 ENTREZGENE
  Q86WP1 ENTREZGENE
  Q8IXX1 ENTREZGENE
  Q9NRL8 ENTREZGENE
  Q9NZ77 ENTREZGENE
  Q9NZ91 ENTREZGENE
  RHG15_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q53R36 UniProtKB/Swiss-Prot
  Q53RD7 UniProtKB/Swiss-Prot
  Q53RT6 UniProtKB/Swiss-Prot
  Q53SX9 UniProtKB/Swiss-Prot
  Q584N9 UniProtKB/Swiss-Prot
  Q6PJE6 UniProtKB/Swiss-Prot
  Q86WP1 UniProtKB/Swiss-Prot
  Q8IXX1 UniProtKB/Swiss-Prot
  Q9NRL8 UniProtKB/Swiss-Prot
  Q9NZ77 UniProtKB/Swiss-Prot
  Q9NZ91 UniProtKB/Swiss-Prot