DOCK11P1 (dedicator of cytokinesis 11 pseudogene 1) - Rat Genome Database

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Gene: DOCK11P1 (dedicator of cytokinesis 11 pseudogene 1) Homo sapiens
Analyze
Symbol: DOCK11P1
Name: dedicator of cytokinesis 11 pseudogene 1
RGD ID: 1348269
HGNC Page HGNC:31719
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: DOCK11  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381444,859,958 - 44,866,240 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1444,860,316 - 44,866,247 (-)EnsemblGRCh38hg38GRCh38
GRCh371445,329,161 - 45,335,443 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361444,399,269 - 44,406,679 (-)NCBINCBI36Build 36hg18NCBI36
Celera1425,190,770 - 25,198,180 (-)NCBICelera
Cytogenetic Map14q21.2NCBI
HuRef1425,441,190 - 25,447,472 (-)NCBIHuRef
CHM1_11445,267,384 - 45,273,666 (-)NCBICHM1_1
T2T-CHM13v2.01439,051,910 - 39,058,192 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in DOCK11P1
1 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:47
Count of miRNA genes:46
Interacting mature miRNAs:47
Transcripts:ENST00000553480
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 1 1 3
Below cutoff 1140 1661 568 62 632 30 1748 926 1090 48 649 671 33 796 1110

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000553480
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1444,860,316 - 44,866,247 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC DOCK11P1 COSMIC
Ensembl Genes ENSG00000259000 Ensembl, ENTREZGENE
GTEx ENSG00000259000 GTEx
HGNC ID HGNC:31719 ENTREZGENE
Human Proteome Map DOCK11P1 Human Proteome Map
NCBI Gene 100132537 ENTREZGENE
PharmGKB PA134922320 PharmGKB