STK19 (serine/threonine kinase 19)

Gene: STK19 (serine/threonine kinase 19) Homo sapiens

Analyze

Symbol:

STK19

Name:

serine/threonine kinase 19

RGD ID:

1347475

HGNC Page

HGNC:11398

Description:

Predicted to enable protein serine/threonine kinase activity. Involved in positive regulation of Ras protein signal transduction. Located in cytoplasm and nuclear speck.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

D6S60; D6S60E; G11; HLA-RP1; inactive serine/threonine-protein kinase 19; MGC117388; MHC class III HLA-RP1; Nuclear serine/threonine protein kinase; RP1; serine/threonine-protein kinase 19

RGD Orthologs

Alliance Genes

More Info

more info ...

Related Pseudogenes:

STK19B

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	31,971,175 - 31,981,446 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	31,971,091 - 31,982,821 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	31,938,952 - 31,949,223 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	32,047,625 - 32,057,202 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	32,047,624 - 32,057,202	NCBI
Celera	6	33,538,714 - 33,548,985 (+)	NCBI		Celera
Cytogenetic Map	6	p21.33	NCBI
HuRef	6	31,725,889 - 31,736,233 (+)	NCBI		HuRef
CHM1_1	6	31,941,033 - 31,951,304 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	31,824,380 - 31,834,652 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

basal cell carcinoma (EXP)

genetic disease (IAGP)

melanoma (IAGP)

proteasome-associated autoinflammatory syndrome 1 (IAGP)

skin melanoma (IAGP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

2,4-dinitrotoluene (ISO)

3,3',5-triiodo-L-thyronine (EXP)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

aflatoxin B1 (ISO)

amitrole (ISO)

ammonium chloride (ISO)

aristolochic acid A (EXP)

atrazine (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

cadmium dichloride (ISO)

CGP 52608 (EXP)

crocidolite asbestos (EXP)

cyclosporin A (EXP,ISO)

dicrotophos (EXP)

ethanol (EXP)

ethyl methanesulfonate (EXP)

methimazole (ISO)

methyl methanesulfonate (EXP)

methylmercury chloride (EXP)

nickel sulfate (EXP)

ozone (EXP)

paracetamol (ISO)

perfluorooctane-1-sulfonic acid (EXP)

resveratrol (EXP)

silicon dioxide (ISO)

sodium arsenite (EXP)

sodium dichromate (ISO)

sulfadimethoxine (ISO)

temozolomide (EXP)

thapsigargin (EXP)

tungsten (ISO)

tunicamycin (EXP)

valproic acid (EXP,ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of Ras protein signal transduction (IBA,IDA,IEA)

Cellular Component

cytoplasm (IDA,IEA)

nuclear speck (IDA)

nucleus (IDA,IEA,TAS)

Molecular Function

ATP binding (IEA)

kinase activity (IEA)

nucleotide binding (IEA)

protein binding (IPI)

protein serine/threonine kinase activity (IDA,IEA,TAS)

transferase activity (IEA)

Phenotype Annotations Click to see Annotation Detail View

Human Phenotype

Cutaneous melanoma (IAGP)

Squamous cell carcinoma of the skin (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:1988494	PMID:8012361	PMID:8132574	PMID:8575831	PMID:9799600	PMID:9812991	PMID:12477932	PMID:14574404	PMID:14656967	PMID:14667819	PMID:15986447	PMID:19423540
PMID:19851445	PMID:19913121	PMID:20205591	PMID:20406964	PMID:20438785	PMID:20628086	PMID:21323541	PMID:21873635	PMID:23263863	PMID:23535732	PMID:23577725	PMID:25416956
PMID:28514442	PMID:30712867	PMID:31452512	PMID:32296183	PMID:32587355	PMID:32707033	PMID:33961781	PMID:34315543	PMID:35545034	PMID:35944360	PMID:38252411

Genomics

Comparative Map Data

STK19
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	31,971,175 - 31,981,446 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	31,971,091 - 31,982,821 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	31,938,952 - 31,949,223 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	32,047,625 - 32,057,202 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	32,047,624 - 32,057,202	NCBI
Celera	6	33,538,714 - 33,548,985 (+)	NCBI		Celera
Cytogenetic Map	6	p21.33	NCBI
HuRef	6	31,725,889 - 31,736,233 (+)	NCBI		HuRef
CHM1_1	6	31,941,033 - 31,951,304 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	6	31,824,380 - 31,834,652 (+)	NCBI		T2T-CHM13v2.0

Stk19
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	35,042,969 - 35,055,879 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	35,042,969 - 35,055,921 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	34,823,993 - 34,836,903 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	34,823,993 - 34,836,945 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	34,960,938 - 34,973,848 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	34,432,049 - 34,444,959 (-)	NCBI		MGSCv36	mm8
Celera	17	37,919,308 - 37,932,232 (-)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	18.38	NCBI

Stk19
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	4,000,216 - 4,009,743 (+)	NCBI		GRCr8
mRatBN7.2	20	3,995,590 - 4,005,117 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	3,995,587 - 4,005,116 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	4,695,543 - 4,705,058 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	4,057,291 - 4,066,806 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	4,594,472 - 4,603,980 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	4,317,440 - 4,517,128 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	20	6,396,796 - 6,596,927 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	4,095,981 - 4,105,509 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	4,096,207 - 4,105,735 (+)	NCBI
Celera	20	4,025,587 - 4,035,112 (-)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

Stk19
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	485,110 - 492,493 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	485,110 - 492,493 (+)	NCBI	ChiLan1.0	ChiLan1.0

STK19
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	46,448,559 - 46,456,620 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	42,410,051 - 42,418,104 (+)	NCBI		NHGRI_mPanPan1

LOC488436
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	27,227,496 - 27,228,457 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	27,125,447 - 27,126,267 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	27,384,792 - 27,385,376 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	36	27,507,298 - 27,507,896 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	27,441,589 - 27,442,173 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	27,591,797 - 27,592,381 (-)	NCBI		UU_Cfam_GSD_1.0

Stk19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	35,984,559 - 35,990,696 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936727	1,570,678 - 1,577,026 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936727	1,570,650 - 1,576,796 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

STK19
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	24,059,452 - 24,067,383 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	24,060,226 - 24,067,398 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	27,744,802 - 27,751,975 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

STK19
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	40,042,264 - 40,049,983 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	40,009,273 - 40,049,936 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	31,888,740 - 31,895,348 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Stk19
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	24,271,875 - 24,280,939 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	24,271,284 - 24,280,963 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in STK19
44 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
NM_004197.1(STK19):c.265G>A (p.Asp89Asn)	single nucleotide variant	Malignant melanoma of skin [RCV000425183]\|Squamous cell carcinoma of the skin [RCV000437661]	Chr6:31972346 [GRCh38] Chr6:31940123 [GRCh37] Chr6:32048102 [NCBI36] Chr6:6p21.33	likely pathogenic\|not provided
NM_004197.1(STK19):c.854G>A (p.Trp285Ter)	single nucleotide variant	Malignant melanoma [RCV000067303]	Chr6:31980501 [GRCh38] Chr6:31948278 [GRCh37] Chr6:32056257 [NCBI36] Chr6:6p21.33	not provided
GRCh38/hg38 6p21.33(chr6:31980353-32041234)x3	copy number gain	See cases [RCV000139532]	Chr6:31980353..32041234 [GRCh38] Chr6:31948130..32009011 [GRCh37] Chr6:32056109..32116990 [NCBI36] Chr6:6p21.33	likely benign
GRCh38/hg38 6p21.33(chr6:31971993-32012974)x1	copy number loss	See cases [RCV000141578]	Chr6:31971993..32012974 [GRCh38] Chr6:31939770..31980751 [GRCh37] Chr6:32047749..32088729 [NCBI36] Chr6:6p21.33	benign
GRCh38/hg38 6p21.33(chr6:31980422-32041505)x1	copy number loss	See cases [RCV000141496]	Chr6:31980422..32041505 [GRCh38] Chr6:31948199..32009282 [GRCh37] Chr6:32056178..32117261 [NCBI36] Chr6:6p21.33	benign
GRCh38/hg38 6p25.3-12.3(chr6:156974-46789291)x3	copy number gain	See cases [RCV000143497]	Chr6:156974..46789291 [GRCh38] Chr6:156974..46757028 [GRCh37] Chr6:101974..46864987 [NCBI36] Chr6:6p25.3-12.3	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3	copy number gain	See cases [RCV000512067]	Chr6:156975..170919482 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)	copy number gain	See cases [RCV000510595]	Chr6:156975..170919482 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3	copy number gain	not provided [RCV000745400]	Chr6:60107..171054786 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:165632-170919470)x3	copy number gain	not provided [RCV000745404]	Chr6:165632..170919470 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p25.3-q27(chr6:108666-170980171)x3	copy number gain	not provided [RCV000745403]	Chr6:108666..170980171 [GRCh37] Chr6:6p25.3-q27	pathogenic
GRCh37/hg19 6p22.1-21.32(chr6:28130359-32108367)x3	copy number gain	not provided [RCV000745592]	Chr6:28130359..32108367 [GRCh37] Chr6:6p22.1-21.32	uncertain significance
GRCh37/hg19 6p22.1-q14.1(chr6:29455465-81447367)	copy number gain	not provided [RCV000767714]	Chr6:29455465..81447367 [GRCh37] Chr6:6p22.1-q14.1	pathogenic
GRCh37/hg19 6p21.33-21.32(chr6:31916915-32278000)x3	copy number gain	not provided [RCV001005792]	Chr6:31916915..32278000 [GRCh37] Chr6:6p21.33-21.32	uncertain significance
GRCh37/hg19 6p21.33-21.31(chr6:31036397-34088832)x3	copy number gain	not provided [RCV001005791]	Chr6:31036397..34088832 [GRCh37] Chr6:6p21.33-21.31	likely pathogenic
NM_005510.4(DXO):c.308T>C (p.Leu103Pro)	single nucleotide variant	Inborn genetic diseases [RCV003198544]	Chr6:31971368 [GRCh38] Chr6:31939145 [GRCh37] Chr6:6p21.33	uncertain significance
NC_000006.11:g.(?_30695893)_(36953949_?)dup	duplication	Proteasome-associated autoinflammatory syndrome 1 [RCV003113679]	Chr6:30695893..36953949 [GRCh37] Chr6:6p21.33-21.2	uncertain significance
NM_004197.2(STK19):c.665G>A (p.Arg222Gln)	single nucleotide variant	Inborn genetic diseases [RCV002727669]	Chr6:31980747 [GRCh38] Chr6:31948524 [GRCh37] Chr6:6p21.33	uncertain significance
NM_005510.4(DXO):c.191C>A (p.Ala64Asp)	single nucleotide variant	Inborn genetic diseases [RCV002840702]	Chr6:31971485 [GRCh38] Chr6:31939262 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.614G>A (p.Arg205Gln)	single nucleotide variant	Inborn genetic diseases [RCV002749970]	Chr6:31980696 [GRCh38] Chr6:31948473 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.438G>A (p.Met146Ile)	single nucleotide variant	Inborn genetic diseases [RCV002693078]	Chr6:31979518 [GRCh38] Chr6:31947295 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.-5G>T	single nucleotide variant	Inborn genetic diseases [RCV002845024]	Chr6:31972407 [GRCh38] Chr6:31940184 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.317A>G (p.Glu106Gly)	single nucleotide variant	Inborn genetic diseases [RCV002713051]	Chr6:31978982 [GRCh38] Chr6:31946759 [GRCh37] Chr6:6p21.33	uncertain significance
NM_005510.4(DXO):c.-186C>T	single nucleotide variant	Inborn genetic diseases [RCV002665344]	Chr6:31972108 [GRCh38] Chr6:31939885 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.698T>C (p.Ile233Thr)	single nucleotide variant	Inborn genetic diseases [RCV002956177]	Chr6:31980780 [GRCh38] Chr6:31948557 [GRCh37] Chr6:6p21.33	uncertain significance
NM_005510.4(DXO):c.59A>G (p.Asn20Ser)	single nucleotide variant	Inborn genetic diseases [RCV002891720]	Chr6:31971617 [GRCh38] Chr6:31939394 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.343G>T (p.Ala115Ser)	single nucleotide variant	Inborn genetic diseases [RCV002963962]	Chr6:31979423 [GRCh38] Chr6:31947200 [GRCh37] Chr6:6p21.33	uncertain significance
NM_032454.1(STK19):c.238A>T (p.Thr80Ser)	single nucleotide variant	Inborn genetic diseases [RCV002792969]	Chr6:31972319 [GRCh38] Chr6:31940096 [GRCh37] Chr6:6p21.33	uncertain significance
NM_005510.4(DXO):c.165T>G (p.Asp55Glu)	single nucleotide variant	Inborn genetic diseases [RCV002669852]	Chr6:31971511 [GRCh38] Chr6:31939288 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.38T>C (p.Phe13Ser)	single nucleotide variant	Inborn genetic diseases [RCV002669587]	Chr6:31972449 [GRCh38] Chr6:31940226 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.646C>T (p.Arg216Trp)	single nucleotide variant	Inborn genetic diseases [RCV003191813]	Chr6:31980728 [GRCh38] Chr6:31948505 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.-3G>A	single nucleotide variant	Inborn genetic diseases [RCV003190066]	Chr6:31972409 [GRCh38] Chr6:31940186 [GRCh37] Chr6:6p21.33	uncertain significance
NM_005510.4(DXO):c.236G>A (p.Gly79Asp)	single nucleotide variant	Inborn genetic diseases [RCV003198955]	Chr6:31971440 [GRCh38] Chr6:31939217 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.104C>G (p.Ser35Trp)	single nucleotide variant	Inborn genetic diseases [RCV003215269]	Chr6:31972624 [GRCh38] Chr6:31940401 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.397C>T (p.Leu133Phe)	single nucleotide variant	Inborn genetic diseases [RCV003303854]	Chr6:31979477 [GRCh38] Chr6:31947254 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.356G>A (p.Arg119Gln)	single nucleotide variant	Inborn genetic diseases [RCV003349142]	Chr6:31979436 [GRCh38] Chr6:31947213 [GRCh37] Chr6:6p21.33	uncertain significance
NM_004197.2(STK19):c.323A>G (p.Tyr108Cys)	single nucleotide variant	Inborn genetic diseases [RCV003367408]	Chr6:31978988 [GRCh38] Chr6:31946765 [GRCh37] Chr6:6p21.33	uncertain significance
NM_005510.4(DXO):c.-199G>A	single nucleotide variant	not provided [RCV003428811]	Chr6:31972121 [GRCh38] Chr6:31939898 [GRCh37] Chr6:6p21.33	likely benign

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	3580
Count of miRNA genes:	923
Interacting mature miRNAs:	1136
Transcripts:	ENST00000375331, ENST00000375333, ENST00000460018, ENST00000463823, ENST00000466132, ENST00000466336, ENST00000469907, ENST00000471028, ENST00000473983, ENST00000478486, ENST00000479644, ENST00000483801, ENST00000484540, ENST00000490822, ENST00000491861, ENST00000492583
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

RH36425

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	31,981,792 - 31,981,908	UniSTS	GRCh37
GRCh37	6	31,949,054 - 31,949,170	UniSTS	GRCh37
Build 36	6	32,057,033 - 32,057,149	RGD	NCBI36
Celera	6	33,548,816 - 33,548,932	RGD
Cytogenetic Map	6	p21.3	UniSTS
GeneMap99-GB4 RH Map	6	119.82	UniSTS

RH11436

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	32,009,297 - 32,009,402	UniSTS	GRCh37
GRCh37	6	31,976,562 - 31,976,667	UniSTS	GRCh37
Build 36	6	32,084,540 - 32,084,645	RGD	NCBI36
Celera	6	33,576,323 - 33,576,428	RGD
Cytogenetic Map	6	p21.3	UniSTS
HuRef	6	31,763,576 - 31,763,681	UniSTS

AL035178

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	31,947,259 - 31,947,447	UniSTS	GRCh37
Build 36	6	32,055,238 - 32,055,426	RGD	NCBI36
Celera	6	33,547,021 - 33,547,209	RGD
Cytogenetic Map	6	p21.3	UniSTS
HuRef	6	31,734,271 - 31,734,459	UniSTS

CYP21A2_2362

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	32,008,832 - 32,009,482	UniSTS	GRCh37
GRCh37	6	31,976,097 - 31,976,747	UniSTS	GRCh37
Build 36	6	32,084,075 - 32,084,725	RGD	NCBI36
Celera	6	33,575,858 - 33,576,508	RGD
HuRef	6	31,763,111 - 31,763,761	UniSTS

STK19__5340

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	31,981,520 - 31,981,998	UniSTS	GRCh37
GRCh37	6	31,948,782 - 31,949,260	UniSTS	GRCh37
Build 36	6	32,056,761 - 32,057,239	RGD	NCBI36
Celera	6	33,548,544 - 33,549,022	RGD
HuRef	6	31,735,791 - 31,736,270	UniSTS

SHGC-12566

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	31,981,575 - 31,981,908	UniSTS	GRCh37
GRCh37	6	31,948,837 - 31,949,170	UniSTS	GRCh37
Build 36	6	32,056,816 - 32,057,149	RGD	NCBI36
Celera	6	33,548,599 - 33,548,932	RGD
Cytogenetic Map	6	p21.3	UniSTS
HuRef	6	31,735,846 - 31,736,180	UniSTS
Stanford-G3 RH Map	6	1662.0	UniSTS
GeneMap99-G3 RH Map	6	1794.0	UniSTS

WI-7720

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	32,008,946 - 32,009,124	UniSTS	GRCh37
GRCh37	6	31,976,211 - 31,976,389	UniSTS	GRCh37
Build 36	6	32,084,189 - 32,084,367	RGD	NCBI36
Celera	6	33,575,972 - 33,576,150	RGD
Cytogenetic Map	6	p21.3	UniSTS
HuRef	6	31,763,225 - 31,763,403	UniSTS
GeneMap99-GB4 RH Map	6	145.45	UniSTS

WI-16314

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	31,937,397 - 31,937,513	UniSTS	GRCh37
Build 36	6	32,045,376 - 32,045,492	RGD	NCBI36
Celera	6	33,537,159 - 33,537,275	RGD
Cytogenetic Map	6	p21	UniSTS
Cytogenetic Map	6	p21.3	UniSTS
HuRef	6	31,724,334 - 31,724,450	UniSTS
GeneMap99-GB4 RH Map	6	120.15	UniSTS
Whitehead-RH Map	6	177.9	UniSTS
NCBI RH Map	6	509.1	UniSTS

DOM3Z

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	6	31,938,427 - 31,938,623	UniSTS	GRCh37
Celera	6	33,538,189 - 33,538,385	UniSTS
HuRef	6	31,725,364 - 31,725,560	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

pharyngeal arch

High

Medium

2112

1668

1488

371

862

238

3402

973

2300

276

1371

1529

147

1180

2000

Low

327

1322

238

253

1088

227

955

1224

1434

143

788

Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_004197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_032454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NR_026717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF019413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK302111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK303438	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK307198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL049547	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL645922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL662849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL844853	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC016916	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC110347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC121128	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC121129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC143833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC143835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX679671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471081	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR753822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR753845	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR759782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR936924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KT584527	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY500658	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY500659	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY500660	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY500661	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	KY500662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L26260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L26261	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L26262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U24578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X77386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X77474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X77489	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X77490	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X77491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000375331 ⟹ ENSP00000364480

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,971,831 - 31,981,451 (+)	Ensembl

RefSeq Acc Id:

ENST00000375333 ⟹ ENSP00000364482

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,971,944 - 31,981,446 (+)	Ensembl

RefSeq Acc Id:

ENST00000460018 ⟹ ENSP00000418350

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,971,166 - 31,972,419 (+)	Ensembl

RefSeq Acc Id:

ENST00000463823

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,374 - 31,979,722 (+)	Ensembl

RefSeq Acc Id:

ENST00000466132

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,971,091 - 31,981,446 (+)	Ensembl

RefSeq Acc Id:

ENST00000466336

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,397 - 31,980,724 (+)	Ensembl

RefSeq Acc Id:

ENST00000469907

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,582 - 31,981,189 (+)	Ensembl

RefSeq Acc Id:

ENST00000471028

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,535 - 31,979,613 (+)	Ensembl

RefSeq Acc Id:

ENST00000473983

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,340 - 31,981,209 (+)	Ensembl

RefSeq Acc Id:

ENST00000478486

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,352 - 31,979,617 (+)	Ensembl

RefSeq Acc Id:

ENST00000479644

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,971,831 - 31,973,376 (+)	Ensembl

RefSeq Acc Id:

ENST00000483801 ⟹ ENSP00000418866

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,381 - 31,981,429 (+)	Ensembl

RefSeq Acc Id:

ENST00000484540

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,578 - 31,979,862 (+)	Ensembl

RefSeq Acc Id:

ENST00000490822

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,980,391 - 31,981,446 (+)	Ensembl

RefSeq Acc Id:

ENST00000491861

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,555 - 31,981,446 (+)	Ensembl

RefSeq Acc Id:

ENST00000492583

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,971,899 - 31,981,164 (+)	Ensembl

RefSeq Acc Id:

ENST00000519179 ⟹ ENSP00000454870

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,381 - 31,982,821 (+)	Ensembl

RefSeq Acc Id:

ENST00000685781 ⟹ ENSP00000509445

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	6	31,972,363 - 31,981,446 (+)	Ensembl

RefSeq Acc Id:

NM_004197 ⟹ NP_004188

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	6	31,972,363 - 31,981,446 (+)	NCBI
GRCh37	6	31,938,952 - 31,949,223 (+)	RGD
Build 36	6	32,047,625 - 32,057,202 (+)	NCBI Archive
Celera	6	33,538,714 - 33,548,985 (+)	RGD
HuRef	6	31,725,889 - 31,736,233 (+)	RGD
CHM1_1	6	31,941,727 - 31,951,304 (+)	NCBI
T2T-CHM13v2.0	6	31,825,568 - 31,834,652 (+)	NCBI

Sequence:

show sequence

CTCTTCCCTCCATTCCTACCCCTTCCCCGGTACCATAAAATCCCGGGATATGAGCTGGAAGAGG
CATCACCTGATCCCGGAGACCTTTGGAGTTAAGAGGCGGCGGAAGCGAGGGCCTGTGGAGTCGG
ATCCTCTTCGGGGTGAGCCAGGGTCGGCGCGCGCGGCTGTCTCAGAACTCATGCAGCTGTTCCC
GCGAGGCCTGTTTGAGGACGCGCTGCCGCCCATCGTGCTGAGGAGCCAGGTGTACAGCCTTGTG
CCTGACAGGACCGTGGCCGACCGGCAGCTGAAGGAGCTTCAAGAGCAGGGGGAGATCAGAATCG
TCCAGCTGGGCTTCGACTTGGATGCCCATGGAATTATCTTCACTGAGGACTACAGGACCAGAGT
CCTCAAGGCCTGTGATGGCCGACCGTATGCTGGGGCAGTGCAGAAATTTCTAGCTTCAGTACTT
CCAGCCTGTGGGGACCTTAGTTTCCAGCAGGACCAAATGACACAGACCTTTGGCTTCAGGGACT
CAGAAATCACGCATCTGGTGAATGCTGGAGTCCTCACCGTCCGAGATGCTGGGAGCTGGTGGCT
AGCTGTGCCTGGAGCTGGGAGATTCATCAAGTACTTTGTTAAAGGGCGCCAGGCTGTCCTTAGC
ATGGTCCGGAAGGCAAAGTACCGGGAACTGCTCCTATCAGAGCTCCTGGGCCGGCGGGCGCCTG
TCGTGGTGCGGCTTGGCCTCACCTACCATGTGCACGACCTCATTGGGGCCCAGCTAGTGGACTG
CATCTCTACCACTTCAGGAACCCTCCTCCGCCTGCCAGAGACATGAAGATTCTGCTCATCATTG
CTCAGCTCCTCAGAGTGGGCCGGGAGGGGACTAGAAGAGCTGCATGATGGTGGCTGAGACAGGG
TCACCTTGGGAAGGCTTGGGAGCCAGGATGAGTGTCGGGCTCTCGTGTGTGCAAAAGGTCAGAT
GTGACTGCTGCTGTTTGCCTGGTTTCTGACCCAGTGGTGGGGTTTGAGCAATGCTTCTCTGCCC
TTCCATGGAAAGTGGAACCAGAAATGGTGCCAAGGCTGTGGCTGTTCCCTTTCGTGTAAAATGG
TGCTGTTATTACTCTGTCTTGAAATAGGAAGGTGGGATTTCTGGGGAGGCTGGTGAAGGAGGGC
AGGGTTCTTTTCTCTACGTGTCATGTTAAAATTGCCAAATAAAGTACCTCTGCCTGTGA

hide sequence

RefSeq Acc Id:

NM_032454 ⟹ NP_115830

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	6	31,971,869 - 31,981,446 (+)	NCBI
GRCh37	6	31,938,952 - 31,949,223 (+)	RGD
Build 36	6	32,047,625 - 32,057,202 (+)	NCBI Archive
Celera	6	33,538,714 - 33,548,985 (+)	RGD
HuRef	6	31,725,889 - 31,736,233 (+)	RGD
CHM1_1	6	31,941,727 - 31,951,304 (+)	NCBI
T2T-CHM13v2.0	6	31,825,074 - 31,834,652 (+)	NCBI

Sequence:

show sequence

GTCCTCCAAATGCAGTGAGGTTAGGAAGGACGTCTGCGCTCAGATCAAGAATCCAGTTACCTCA
AAGCTCCCCAACTTCCACCTCCGCAGAGCTATGACGTCATGGCAGGCACGCCAGAGGCCGAAGG
ATGCAAAAGTGGTTTTCTGCTTTCGATGATGCAATCATTCAGCGACAGTGGCGGGCAAACCCCT
CCCGGGGCGGGGGAGGTGTGAGCTTCACGAAGGAGGTTGACACCAACGTGGCCACCGGCGCCCC
TCCACGCCGCCAACGAGTCCCCGGGCGTGCGTGCCCTTGGAGGGAGCCAATCCGCGGCCGGCGT
GGGGCCCGGCCTGGCGGAGGTGATGCTGGAGGGACGCCCGGGGAGACCGTACGTCACTGCTCTG
CGCCGGAAGACCCTATTTTCAGGTTCTCTTCCCTCCATTCCTACCCCTTCCCCGGTACCATAAA
ATCCCGGGATATGAGCTGGAAGAGGCATCACCTGATCCCGGAGACCTTTGGAGTTAAGAGGCGG
CGGAAGCGAGGGCCTGTGGAGTCGGATCCTCTTCGGGGTGAGCCAGGGTCGGCGCGCGCGGCTG
TCTCAGAACTCATGCAGCTGTTCCCGCGAGGCCTGTTTGAGGACGCGCTGCCGCCCATCGTGCT
GAGGAGCCAGGTGTACAGCCTTGTGCCTGACAGGACCGTGGCCGACCGGCAGCTGAAGGAGCTT
CAAGAGCAGGGGGAGATCAGAATCGTCCAGCTGGGCTTCGACTTGGATGCCCATGGAATTATCT
TCACTGAGGACTACAGGACCAGAGTATGTGACTGTGTCCTCAAGGCCTGTGATGGCCGACCGTA
TGCTGGGGCAGTGCAGAAATTTCTAGCTTCAGTACTTCCAGCCTGTGGGGACCTTAGTTTCCAG
CAGGACCAAATGACACAGACCTTTGGCTTCAGGGACTCAGAAATCACGCATCTGGTGAATGCTG
GAGTCCTCACCGTCCGAGATGCTGGGAGCTGGTGGCTAGCTGTGCCTGGAGCTGGGAGATTCAT
CAAGTACTTTGTTAAAGGGCGCCAGGCTGTCCTTAGCATGGTCCGGAAGGCAAAGTACCGGGAA
CTGCTCCTATCAGAGCTCCTGGGCCGGCGGGCGCCTGTCGTGGTGCGGCTTGGCCTCACCTACC
ATGTGCACGACCTCATTGGGGCCCAGCTAGTGGACTGCATCTCTACCACTTCAGGAACCCTCCT
CCGCCTGCCAGAGACATGAAGATTCTGCTCATCATTGCTCAGCTCCTCAGAGTGGGCCGGGAGG
GGACTAGAAGAGCTGCATGATGGTGGCTGAGACAGGGTCACCTTGGGAAGGCTTGGGAGCCAGG
ATGAGTGTCGGGCTCTCGTGTGTGCAAAAGGTCAGATGTGACTGCTGCTGTTTGCCTGGTTTCT
GACCCAGTGGTGGGGTTTGAGCAATGCTTCTCTGCCCTTCCATGGAAAGTGGAACCAGAAATGG
TGCCAAGGCTGTGGCTGTTCCCTTTCGTGTAAAATGGTGCTGTTATTACTCTGTCTTGAAATAG
GAAGGTGGGATTTCTGGGGAGGCTGGTGAAGGAGGGCAGGGTTCTTTTCTCTACGTGTCATGTT
AAAATTGCCAAATAAAGTACCTCTGCCTGTGA

hide sequence

RefSeq Acc Id:

NR_026717

RefSeq Status:

REVIEWED

Type:

NON-CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	6	31,971,175 - 31,981,446 (+)	NCBI
GRCh37	6	31,938,952 - 31,949,223 (+)	RGD
Celera	6	33,538,714 - 33,548,985 (+)	RGD
HuRef	6	31,725,889 - 31,736,233 (+)	RGD
CHM1_1	6	31,941,033 - 31,951,304 (+)	NCBI
T2T-CHM13v2.0	6	31,824,380 - 31,834,652 (+)	NCBI

Sequence:

show sequence

GTCTGACACAAGCATTAGTGAGATGCTCCCCTCGAAGAATAGTCTTGTTTCTTCTAAGGACTGA
TTCTCACCCCGGCTTTGGCTCTCCTAATTTTAGAGGGTCCTCCAAATGCAGTGAGGTTAGGAAG
GACGTCTGCGCTCAGATCAAGAATCCAGTTACCTCAAAGCTCCCCAACTTCCACCTCCGCAGAG
CTATGACGTCATGGCAGGCACGCCAGAGGCCGAAGGATGCAAAAGTGGTTTTCTGCTTTCGATG
ATGCAATCATTCAGCGACAGTGGCGGGCAAACCCCTCCCGGGGCGGGGGAGGTGTGAGCTTCAC
GAAGGAGGTTGACACCAACGTGGCCACCGGCGCCCCTCCACGCCGCCAACGAGTCCCCGGGCGT
GCGTGCCCTTGGAGGGAGCCAATCCGCGGCCGGCGTGGGGCCCGGCCTGGCGGAGGTGATGCTG
GTATGTGCGTCGCCACCGCCCCTCCCAGCACTGACGGGCCTGAGGGACGACAAGTTGACGCTCC
TTTCGTCATCACCTGGTCTAGGAGGGACGCCCGGGGAGACCGTACGTCACTGCTCTGCGCCGGA
AGACCCTATTTTCAGGTTCTCTTCCCTCCATTCCTACCCCTTCCCCGGTACCATAAAATCCCGG
GATATGAGCTGGAAGAGGCATCACCTGATCCCGGAGACCTTTGGAGTTAAGAGGCGGCGGAAGC
GAGGGCCTGTGGAGTCGGATCCTCTTCGGGGTGAGCCAGGGTCGGCGCGCGCGGCTGTCTCAGA
ACTCATGCAGCTGTTCCCGCGAGGCCTGTTTGAGGACGCGCTGCCGCCCATCGTGCTGAGGAGC
CAGGTGTACAGCCTTGTGCCTGACAGGACCGTGGCCGACCGGCAGCTGAAGGAGCTTCAAGAGC
AGGGGGAGATCAGAATCGTCCAGCTGGGCTTCGACTTGGATGCCCATGGAATTATCTTCACTGA
GGACTACAGGACCAGAGTCCTCAAGGCCTGTGATGGCCGACCGTATGCTGGGGCAGTGCAGAAA
TTTCTAGCTTCAGTACTTCCAGCCTGTGGGGACCTTAGTTTCCAGCAGGACCAAATGACACAGA
CCTTTGGCTTCAGGGACTCAGAAATCACGCATCTGGTGAATGCTGGAGTCCTCACCGTCCGAGA
TGCTGGGAGCTGGTGGCTAGCTGTGCCTGGAGCTGGGAGATTCATCAAGTACTTTGTTAAAGGG
CGCCAGGCTGTCCTTAGCATGGTCCGGAAGGCAAAGTACCGGGAACTGCTCCTATCAGAGCTCC
TGGGCCGGCGGGCGCCTGTCGTGGTGCGGCTTGGCCTCACCTACCATGTGCACGACCTCATTGG
GGCCCAGCTAGTGGACTGCATCTCTACCACTTCAGGAACCCTCCTCCGCCTGCCAGAGACATGA
AGATTCTGCTCATCATTGCTCAGCTCCTCAGAGTGGGCCGGGAGGGGACTAGAAGAGCTGCATG
ATGGTGGCTGAGACAGGGTCACCTTGGGAAGGCTTGGGAGCCAGGATGAGTGTCGGGCTCTCGT
GTGTGCAAAAGGTCAGATGTGACTGCTGCTGTTTGCCTGGTTTCTGACCCAGTGGTGGGGTTTG
AGCAATGCTTCTCTGCCCTTCCATGGAAAGTGGAACCAGAAATGGTGCCAAGGCTGTGGCTGTT
CCCTTTCGTGTAAAATGGTGCTGTTATTACTCTGTCTTGAAATAGGAAGGTGGGATTTCTGGGG
AGGCTGGTGAAGGAGGGCAGGGTTCTTTTCTCTACGTGTCATGTTAAAATTGCCAAATAAAGTA
CCTCTGCCTGTGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_004188	(Get FASTA)	NCBI Sequence Viewer
	NP_115830	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA20120	(Get FASTA)	NCBI Sequence Viewer
	AAA20122	(Get FASTA)	NCBI Sequence Viewer
	AAA99716	(Get FASTA)	NCBI Sequence Viewer
	AAB67976	(Get FASTA)	NCBI Sequence Viewer
	AAI10348	(Get FASTA)	NCBI Sequence Viewer
	AAI21129	(Get FASTA)	NCBI Sequence Viewer
	AAI21130	(Get FASTA)	NCBI Sequence Viewer
	AAI43834	(Get FASTA)	NCBI Sequence Viewer
	AQY77130	(Get FASTA)	NCBI Sequence Viewer
	AQY77131	(Get FASTA)	NCBI Sequence Viewer
	AQY77132	(Get FASTA)	NCBI Sequence Viewer
	AQY77133	(Get FASTA)	NCBI Sequence Viewer
	AQY77134	(Get FASTA)	NCBI Sequence Viewer
	BAG63491	(Get FASTA)	NCBI Sequence Viewer
	BAG64486	(Get FASTA)	NCBI Sequence Viewer
	CAA54565	(Get FASTA)	NCBI Sequence Viewer
	CAA54622	(Get FASTA)	NCBI Sequence Viewer
	CAA54623	(Get FASTA)	NCBI Sequence Viewer
	CAB89303	(Get FASTA)	NCBI Sequence Viewer
	CAB89304	(Get FASTA)	NCBI Sequence Viewer
	EAX03566	(Get FASTA)	NCBI Sequence Viewer
	EAX03567	(Get FASTA)	NCBI Sequence Viewer
	EAX03568	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSP00000364480.3
	ENSP00000364482.3
	ENSP00000372817.4
	ENSP00000372818.2
	ENSP00000389352.1
	ENSP00000391798.2
	ENSP00000393272.1
	ENSP00000395028.1
	ENSP00000395864.2
	ENSP00000399915.1
	ENSP00000403479.2
	ENSP00000413766.2
	ENSP00000418350
	ENSP00000418866.2
	ENSP00000428007.1
	ENSP00000429285.1
	ENSP00000429583.1
	ENSP00000446620.1
	ENSP00000447097.1
	ENSP00000448123.1
	ENSP00000449149.1
	ENSP00000454870.2
	ENSP00000476036.1
	ENSP00000501746.1
	ENSP00000509445
	ENSP00000509445.1
GenBank Protein	P49842	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_115830 ⟸ NM_032454
- Peptide Label:	isoform 2
- UniProtKB:	A0A1U9X8L3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPIRGRR GARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIPETFGVKRR RKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLKEL QEQGEIRIVQLGFDLDAHGIIFTEDYRTRVCDCVLKACDGRPYAGAVQKFLASVLPACGDLSFQ QDQMTQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIKYFVKGRQAVLSMVRKAKYRE LLLSELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSGTLLRLPET hide sequence

RefSeq Acc Id:	NP_004188 ⟸ NM_004197
- Peptide Label:	isoform 1
- UniProtKB:	Q5ST75 (UniProtKB/Swiss-Prot), Q5ST72 (UniProtKB/Swiss-Prot), Q5JP77 (UniProtKB/Swiss-Prot), Q31617 (UniProtKB/Swiss-Prot), Q13159 (UniProtKB/Swiss-Prot), P49842 (UniProtKB/Swiss-Prot), B0QZR5 (UniProtKB/Swiss-Prot), A6NFW8 (UniProtKB/Swiss-Prot), A6NF95 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MQKWFSAFDDAIIQRQWRANPSRGGGGVSFTKEVDTNVATGAPPRRQRVPGRACPWREPIRGRR GARPGGGDAGGTPGETVRHCSAPEDPIFRFSSLHSYPFPGTIKSRDMSWKRHHLIPETFGVKRR RKRGPVESDPLRGEPGSARAAVSELMQLFPRGLFEDALPPIVLRSQVYSLVPDRTVADRQLKEL QEQGEIRIVQLGFDLDAHGIIFTEDYRTRVLKACDGRPYAGAVQKFLASVLPACGDLSFQQDQM TQTFGFRDSEITHLVNAGVLTVRDAGSWWLAVPGAGRFIKYFVKGRQAVLSMVRKAKYRELLLS ELLGRRAPVVVRLGLTYHVHDLIGAQLVDCISTTSGTLLRLPET hide sequence

RefSeq Acc Id:

ENSP00000454870 ⟸ ENST00000519179

RefSeq Acc Id:

ENSP00000364480 ⟸ ENST00000375331

RefSeq Acc Id:

ENSP00000364482 ⟸ ENST00000375333

RefSeq Acc Id:

ENSP00000418866 ⟸ ENST00000483801

RefSeq Acc Id:

ENSP00000418350 ⟸ ENST00000460018

RefSeq Acc Id:

ENSP00000509445 ⟸ ENST00000685781

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P49842-F1-model_v2	AlphaFold	P49842	1-368	view protein structure

Promoters

RGD ID:

6872696

Promoter ID:

EPDNEW_H9513

Type:

initiation region

Name:

STK19_2

Description:

serine/threonine kinase 19

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H9517

Experiment Methods:

Single-end sequencing.; Paired-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	6	31,970,950 - 31,971,010	EPDNEW

RGD ID:

6872704

Promoter ID:

EPDNEW_H9517

Type:

initiation region

Name:

STK19_1

Description:

serine/threonine kinase 19

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H9513

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	6	31,972,374 - 31,972,434	EPDNEW

RGD ID:

6804821

Promoter ID:

HG_KWN:53035

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

K562, Lymphoblastoid, NB4

Transcripts:

OTTHUMT00000076481, UC003NYT.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	6	32,045,961 - 32,047,017 (+)	MPROMDB

RGD ID:

6804144

Promoter ID:

HG_KWN:53036

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, Jurkat, K562, Lymphoblastoid, NB4

Transcripts:

ENST00000375338, NM_004197, NM_032454, OTTHUMT00000076477, OTTHUMT00000076478, OTTHUMT00000076480, OTTHUMT00000076485, OTTHUMT00000268648, OTTHUMT00000268668, OTTHUMT00000268669, UC010JTM.1

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	6	32,047,691 - 32,048,432 (+)	MPROMDB

RGD ID:

6804819

Promoter ID:

HG_KWN:53037

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

K562

Transcripts:

OTTHUMT00000268670

Position:

Human Assembly	Chr	Position (strand)	Source
Build 36	6	32,054,991 - 32,055,491 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:11398	AgrOrtholog
COSMIC	STK19	COSMIC
Ensembl Genes	ENSG00000204344	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSG00000206342	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSG00000226033	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSG00000226257	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSG00000234947	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSG00000236250	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	ENSG00000272295	UniProtKB/TrEMBL
Ensembl Transcript	ENST00000375331.7	UniProtKB/Swiss-Prot
	ENST00000375333.3	UniProtKB/Swiss-Prot
	ENST00000383327.8	UniProtKB/Swiss-Prot
	ENST00000383328.6	UniProtKB/TrEMBL
	ENST00000424104.5	UniProtKB/Swiss-Prot
	ENST00000425138.5	UniProtKB/Swiss-Prot
	ENST00000426802.5	UniProtKB/Swiss-Prot
	ENST00000431383.6	UniProtKB/Swiss-Prot
	ENST00000433397.6	UniProtKB/Swiss-Prot
	ENST00000438256.6	UniProtKB/Swiss-Prot
	ENST00000444147.5	UniProtKB/Swiss-Prot
	ENST00000452688.6	UniProtKB/Swiss-Prot
	ENST00000460018	UniProtKB/TrEMBL
	ENST00000466132	ENTREZGENE
	ENST00000481181.5	UniProtKB/TrEMBL
	ENST00000483801.6	UniProtKB/TrEMBL
	ENST00000519179.6	UniProtKB/TrEMBL
	ENST00000519915.1	UniProtKB/TrEMBL
	ENST00000520138.5	UniProtKB/TrEMBL
	ENST00000523972.5	UniProtKB/TrEMBL
	ENST00000547578.1	UniProtKB/TrEMBL
	ENST00000549310.1	UniProtKB/TrEMBL
	ENST00000550656.1	UniProtKB/TrEMBL
	ENST00000551718.1	UniProtKB/TrEMBL
	ENST00000674578.1	UniProtKB/TrEMBL
	ENST00000685781	ENTREZGENE
	ENST00000685781.1	UniProtKB/Swiss-Prot
GTEx	ENSG00000204344	GTEx
	ENSG00000206342	GTEx
	ENSG00000226033	GTEx
	ENSG00000226257	GTEx
	ENSG00000234947	GTEx
	ENSG00000236250	GTEx
	ENSG00000272295	GTEx
HGNC ID	HGNC:11398	ENTREZGENE
Human Proteome Map	STK19	Human Proteome Map
InterPro	Ser/Thr_kinase_19	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:8859	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene	8859	ENTREZGENE
OMIM	604977	OMIM
PANTHER	PTHR15243	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SERINE/THREONINE-PROTEIN KINASE 19	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Stk19	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA36206	PharmGKB
UniProt	A0A0G2JKI8_HUMAN	UniProtKB/TrEMBL
	A0A0G2JLL1_HUMAN	UniProtKB/TrEMBL
	A0A140T8X5_HUMAN	UniProtKB/TrEMBL
	A0A140TA37_HUMAN	UniProtKB/TrEMBL
	A0A1U9X8L3	ENTREZGENE, UniProtKB/TrEMBL
	A6NF95	ENTREZGENE
	A6NFW8	ENTREZGENE
	B0QZR5	ENTREZGENE
	B7ZLI8_HUMAN	UniProtKB/TrEMBL
	C9J6S8_HUMAN	UniProtKB/TrEMBL
	H0YAS4_HUMAN	UniProtKB/TrEMBL
	P49842	ENTREZGENE
	Q13159	ENTREZGENE
	Q31617	ENTREZGENE
	Q5JP77	ENTREZGENE
	Q5ST72	ENTREZGENE
	Q5ST75	ENTREZGENE
	STK19_HUMAN	UniProtKB/Swiss-Prot
UniProt Secondary	A6NF95	UniProtKB/Swiss-Prot
	A6NFW8	UniProtKB/Swiss-Prot
	B0QZR5	UniProtKB/Swiss-Prot
	Q13159	UniProtKB/Swiss-Prot
	Q31617	UniProtKB/Swiss-Prot
	Q5JP77	UniProtKB/Swiss-Prot
	Q5ST72	UniProtKB/Swiss-Prot
	Q5ST75	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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