CREB3L4 (cAMP responsive element binding protein 3 like 4) - Rat Genome Database

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Gene: CREB3L4 (cAMP responsive element binding protein 3 like 4) Homo sapiens
Analyze
Symbol: CREB3L4
Name: cAMP responsive element binding protein 3 like 4
RGD ID: 1347233
HGNC Page HGNC:18854
Description: Enables sequence-specific double-stranded DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Located in several cellular components, including Golgi apparatus; endoplasmic reticulum; and nucleus. Biomarker of prostate adenocarcinoma and prostate carcinoma in situ.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AIBZIP; androgen-induced basic leucine zipper protein; Androgen-Induced bZIP; ATCE1; attaching to CRE-like 1; cAMP responsive element binding protein 1; cAMP responsive element binding protein 3-like 4; cAMP-responsive element-binding protein 3-like protein 4; cAMP-responsive element-binding protein 4; CREB-4; CREB3; CREB4; cyclic AMP-responsive element-binding protein 3-like protein 4; cyclic AMP-responsive element-binding protein 4; hJAL; JAL; tisp40; transcript induced in spermiogenesis protein 40
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381153,967,487 - 153,974,359 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1153,967,534 - 153,974,361 (+)EnsemblGRCh38hg38GRCh38
GRCh371153,940,378 - 153,946,835 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361152,207,021 - 152,213,456 (+)NCBINCBI36Build 36hg18NCBI36
Build 341150,753,469 - 150,759,905NCBI
Celera1127,012,147 - 127,018,583 (+)NCBICelera
Cytogenetic Map1q21.3NCBI
HuRef1125,302,901 - 125,309,202 (+)NCBIHuRef
CHM1_11155,336,628 - 155,343,154 (+)NCBICHM1_1
T2T-CHM13v2.01153,104,744 - 153,111,622 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Evaluation of AIbZIP and Cdc47 as markers for human prostatic diseases. Levesque MH, etal., Urology. 2007 Jan;69(1):196-201. doi: 10.1016/j.urology.2006.11.001.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. AIbZIP, a novel bZIP gene located on chromosome 1q21.3 that is highly expressed in prostate tumors and of which the expression is up-regulated by androgens in LNCaP human prostate cancer cells. Qi H, etal., Cancer Res. 2002 Feb 1;62(3):721-33.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. The impact of the unfolded protein response on human disease. Wang S and Kaufman RJ, J Cell Biol. 2012 Jun 25;197(7):857-67. doi: 10.1083/jcb.201110131.
Additional References at PubMed
PMID:11956138   PMID:12111373   PMID:12477932   PMID:12732631   PMID:16236796   PMID:16344560   PMID:16595651   PMID:17712038   PMID:17933519   PMID:18068530   PMID:19274049   PMID:21873635  
PMID:21988832   PMID:22658674   PMID:22829733   PMID:22903471   PMID:25241761   PMID:27853318   PMID:28338058   PMID:28473536   PMID:29509190   PMID:30483806   PMID:31527615   PMID:32026099  
PMID:32296183   PMID:33106913   PMID:33961781   PMID:35256949   PMID:38236913  


Genomics

Comparative Map Data
CREB3L4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381153,967,487 - 153,974,359 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1153,967,534 - 153,974,361 (+)EnsemblGRCh38hg38GRCh38
GRCh371153,940,378 - 153,946,835 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361152,207,021 - 152,213,456 (+)NCBINCBI36Build 36hg18NCBI36
Build 341150,753,469 - 150,759,905NCBI
Celera1127,012,147 - 127,018,583 (+)NCBICelera
Cytogenetic Map1q21.3NCBI
HuRef1125,302,901 - 125,309,202 (+)NCBIHuRef
CHM1_11155,336,628 - 155,343,154 (+)NCBICHM1_1
T2T-CHM13v2.01153,104,744 - 153,111,622 (+)NCBIT2T-CHM13v2.0
Creb3l4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39390,144,805 - 90,161,387 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl390,144,807 - 90,150,819 (-)EnsemblGRCm39 Ensembl
GRCm38390,237,498 - 90,244,582 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl390,237,500 - 90,243,512 (-)EnsemblGRCm38mm10GRCm38
MGSCv37390,041,422 - 90,047,434 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36390,323,427 - 90,329,439 (-)NCBIMGSCv36mm8
Celera390,274,687 - 90,280,699 (-)NCBICelera
Cytogenetic Map3F1NCBI
cM Map339.21NCBI
Creb3l4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82177,987,981 - 177,994,568 (-)NCBIGRCr8
mRatBN7.22175,690,340 - 175,695,846 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2175,690,335 - 175,695,932 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2182,830,536 - 182,835,520 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02180,852,924 - 180,857,908 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02175,453,207 - 175,458,193 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02189,596,657 - 189,602,243 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2189,595,415 - 189,602,143 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02209,029,454 - 209,035,218 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42182,477,247 - 182,482,238 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12182,427,352 - 182,432,344 (-)NCBI
Celera2169,626,107 - 169,631,098 (-)NCBICelera
Cytogenetic Map2q34NCBI
Creb3l4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955545564,193 - 568,942 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955545563,710 - 569,224 (+)NCBIChiLan1.0ChiLan1.0
CREB3L4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2195,857,885 - 95,864,728 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1195,593,128 - 95,599,854 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01129,324,479 - 129,331,204 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11132,952,912 - 132,959,696 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1132,953,062 - 132,959,696 (+)Ensemblpanpan1.1panPan2
CREB3L4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1743,161,814 - 43,166,149 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl743,161,816 - 43,165,641 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha742,652,165 - 42,656,509 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0743,032,190 - 43,036,533 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl743,032,195 - 43,036,019 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1742,810,850 - 42,815,193 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0742,864,031 - 42,868,380 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0743,148,371 - 43,152,717 (-)NCBIUU_Cfam_GSD_1.0
Creb3l4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505824,684,768 - 24,689,754 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365803,715,027 - 3,724,282 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365803,715,122 - 3,720,154 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CREB3L4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl495,716,537 - 95,722,947 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1495,716,530 - 95,723,959 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24104,617,839 - 104,624,693 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CREB3L4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1209,839,137 - 9,848,413 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl209,838,085 - 9,845,287 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660389,208,543 - 9,218,600 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Creb3l4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248853,250,116 - 3,254,634 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248853,249,747 - 3,255,210 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CREB3L4
21 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 1q21.3(chr1:153699434-153981614)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053212]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053212]|See cases [RCV000053212] Chr1:153699434..153981614 [GRCh38]
Chr1:153671910..153954090 [GRCh37]
Chr1:151938534..152220714 [NCBI36]
Chr1:1q21.3		 uncertain significance
GRCh38/hg38 1q21.3(chr1:153759563-154219803)x1 copy number loss See cases [RCV000053883] Chr1:153759563..154219803 [GRCh38]
Chr1:153732039..154192279 [GRCh37]
Chr1:151998663..152458903 [NCBI36]
Chr1:1q21.3		 pathogenic
GRCh38/hg38 1q21.3(chr1:153939571-153978276)x1 copy number loss See cases [RCV000053884] Chr1:153939571..153978276 [GRCh38]
Chr1:153912047..153950752 [GRCh37]
Chr1:152178671..152217376 [NCBI36]
Chr1:1q21.3		 pathogenic
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_001255978.2(CREB3L4):c.959C>T (p.Pro320Leu) single nucleotide variant Inborn genetic diseases [RCV003259904] Chr1:153973681 [GRCh38]
Chr1:153946157 [GRCh37]
Chr1:1q21.3		 uncertain significance
GRCh37/hg19 1q21.3-23.1(chr1:153751465-156660462)x3 copy number gain not provided [RCV000585385] Chr1:153751465..156660462 [GRCh37]
Chr1:1q21.3-23.1		 likely pathogenic
Single allele deletion Severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome [RCV000677922] Chr1:153887335..154062496 [GRCh38]
Chr1:153859810..154034971 [GRCh37]
Chr1:1q21.3		 likely pathogenic
GRCh37/hg19 1q21.3(chr1:150853044-154647786)x3 copy number gain not provided [RCV000684655] Chr1:150853044..154647786 [GRCh37]
Chr1:1q21.3		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_001255978.2(CREB3L4):c.676C>T (p.Arg226Cys) single nucleotide variant Inborn genetic diseases [RCV003245972] Chr1:153973011 [GRCh38]
Chr1:153945487 [GRCh37]
Chr1:1q21.3		 uncertain significance
GRCh37/hg19 1q21.3(chr1:153701504-154218584) copy number loss Severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome [RCV000767778] Chr1:153701504..154218584 [GRCh37]
Chr1:1q21.3		 pathogenic
GRCh37/hg19 1q21.3(chr1:153659094-154307972)x3 copy number gain not provided [RCV001005142] Chr1:153659094..154307972 [GRCh37]
Chr1:1q21.3		 uncertain significance
GRCh37/hg19 1q21.3(chr1:153866956-154000766)x1 copy number loss not provided [RCV001258472] Chr1:153866956..154000766 [GRCh37]
Chr1:1q21.3		 uncertain significance
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44		 uncertain significance
NC_000001.10:g.(?_149895434)_(156851434_?)dup duplication Autosomal recessive mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency [RCV001958273]|Congenital neutropenia-myelofibrosis-nephromegaly syndrome [RCV001958271]|Kostmann syndrome [RCV003120769]|MHC class II deficiency [RCV001992607] Chr1:149895434..156851434 [GRCh37]
Chr1:1q21.2-23.1		 uncertain significance
NC_000001.10:g.(?_153782653)_(153964569_?)del deletion not provided [RCV003109731] Chr1:153782653..153964569 [GRCh37]
Chr1:1q21.3		 pathogenic
NM_001255978.2(CREB3L4):c.1150G>T (p.Gly384Trp) single nucleotide variant Inborn genetic diseases [RCV002945598] Chr1:153974027 [GRCh38]
Chr1:153946503 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.305C>G (p.Pro102Arg) single nucleotide variant Inborn genetic diseases [RCV002945920] Chr1:153969060 [GRCh38]
Chr1:153941536 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.778C>G (p.Gln260Glu) single nucleotide variant Inborn genetic diseases [RCV002783300] Chr1:153973229 [GRCh38]
Chr1:153945705 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.1084G>A (p.Ala362Thr) single nucleotide variant Inborn genetic diseases [RCV002925720] Chr1:153973961 [GRCh38]
Chr1:153946437 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.166C>T (p.Arg56Cys) single nucleotide variant Inborn genetic diseases [RCV002758288] Chr1:153968691 [GRCh38]
Chr1:153941167 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.123G>C (p.Arg41Ser) single nucleotide variant Inborn genetic diseases [RCV002827801] Chr1:153968648 [GRCh38]
Chr1:153941124 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.1150G>A (p.Gly384Arg) single nucleotide variant Inborn genetic diseases [RCV002985769] Chr1:153974027 [GRCh38]
Chr1:153946503 [GRCh37]
Chr1:1q21.3		 likely benign
NM_001255978.2(CREB3L4):c.1120G>A (p.Glu374Lys) single nucleotide variant Inborn genetic diseases [RCV002955931] Chr1:153973997 [GRCh38]
Chr1:153946473 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.1165G>A (p.Val389Met) single nucleotide variant Inborn genetic diseases [RCV002941743] Chr1:153974042 [GRCh38]
Chr1:153946518 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.845C>T (p.Thr282Met) single nucleotide variant Inborn genetic diseases [RCV002792312] Chr1:153973412 [GRCh38]
Chr1:153945888 [GRCh37]
Chr1:1q21.3		 likely benign
NM_001255978.2(CREB3L4):c.985C>T (p.Pro329Ser) single nucleotide variant Inborn genetic diseases [RCV002702821] Chr1:153973707 [GRCh38]
Chr1:153946183 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.1145C>T (p.Pro382Leu) single nucleotide variant Inborn genetic diseases [RCV002896194] Chr1:153974022 [GRCh38]
Chr1:153946498 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.334C>T (p.Leu112Phe) single nucleotide variant Inborn genetic diseases [RCV002677323] Chr1:153969089 [GRCh38]
Chr1:153941565 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.1015A>T (p.Thr339Ser) single nucleotide variant Inborn genetic diseases [RCV003219426] Chr1:153973892 [GRCh38]
Chr1:153946368 [GRCh37]
Chr1:1q21.3		 uncertain significance
GRCh37/hg19 1q12-23.1(chr1:142535935-157648813)x3 copy number gain Chromosome 1q21.1 duplication syndrome [RCV003329522] Chr1:142535935..157648813 [GRCh37]
Chr1:1q12-23.1		 pathogenic
NM_001255978.2(CREB3L4):c.948C>G (p.Phe316Leu) single nucleotide variant Inborn genetic diseases [RCV003369487] Chr1:153973670 [GRCh38]
Chr1:153946146 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.691G>A (p.Ala231Thr) single nucleotide variant Inborn genetic diseases [RCV003347179] Chr1:153973026 [GRCh38]
Chr1:153945502 [GRCh37]
Chr1:1q21.3		 uncertain significance
NM_001255978.2(CREB3L4):c.254C>T (p.Pro85Leu) single nucleotide variant Inborn genetic diseases [RCV003353980] Chr1:153969009 [GRCh38]
Chr1:153941485 [GRCh37]
Chr1:1q21.3		 uncertain significance
GRCh37/hg19 1q21.1-23.1(chr1:144368497-158992086)x3 copy number gain not specified [RCV003986717] Chr1:144368497..158992086 [GRCh37]
Chr1:1q21.1-23.1		 pathogenic
GRCh37/hg19 1q21.1-23.1(chr1:146577511-157155587)x3 copy number gain not specified [RCV003987261] Chr1:146577511..157155587 [GRCh37]
Chr1:1q21.1-23.1		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3483
Count of miRNA genes:874
Interacting mature miRNAs:1045
Transcripts:ENST00000271889, ENST00000368600, ENST00000368601, ENST00000368603, ENST00000368607, ENST00000405694, ENST00000431292, ENST00000449724, ENST00000461688, ENST00000468845, ENST00000473340, ENST00000477617, ENST00000479010, ENST00000492729
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH67852  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371153,946,526 - 153,946,661UniSTSGRCh37
Build 361152,213,150 - 152,213,285RGDNCBI36
Celera1127,018,277 - 127,018,412RGD
Cytogenetic Map1q21UniSTS
Cytogenetic Map1q21.3UniSTS
HuRef1125,308,888 - 125,309,023UniSTS
D1S2463  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371153,940,811 - 153,941,019UniSTSGRCh37
Build 361152,207,435 - 152,207,643RGDNCBI36
Celera1127,012,561 - 127,012,769RGD
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q21UniSTS
HuRef1125,303,397 - 125,303,605UniSTS
Whitehead-RH Map1671.5UniSTS
Whitehead-YAC Contig Map1 UniSTS
NCBI RH Map11294.3UniSTS
WI-22571  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371153,939,116 - 153,939,292UniSTSGRCh37
Build 361152,205,740 - 152,205,916RGDNCBI36
Celera1127,010,867 - 127,011,043RGD
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q21UniSTS
HuRef1125,301,702 - 125,301,878UniSTS
GeneMap99-GB4 RH Map1541.31UniSTS
Whitehead-RH Map1673.1UniSTS
NCBI RH Map11114.2UniSTS
RH63845  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371153,947,025 - 153,947,232UniSTSGRCh37
Build 361152,213,649 - 152,213,856RGDNCBI36
Celera1127,018,776 - 127,018,983RGD
Cytogenetic Map1q21UniSTS
Cytogenetic Map1q21.3UniSTS
HuRef1125,309,387 - 125,309,594UniSTS
GeneMap99-GB4 RH Map1552.5UniSTS
Whitehead-YAC Contig Map1 UniSTS
NCBI RH Map11097.0UniSTS
RH11825  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371153,946,863 - 153,946,982UniSTSGRCh37
Build 361152,213,487 - 152,213,606RGDNCBI36
Celera1127,018,614 - 127,018,733RGD
Cytogenetic Map1q21UniSTS
Cytogenetic Map1q21.3UniSTS
HuRef1125,309,225 - 125,309,344UniSTS
GeneMap99-GB4 RH Map1552.65UniSTS
NCBI RH Map11081.0UniSTS
CREB3L4_4636  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371153,946,347 - 153,946,858UniSTSGRCh37
Build 361152,212,971 - 152,213,482RGDNCBI36
Celera1127,018,098 - 127,018,609RGD
HuRef1125,308,709 - 125,309,220UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 768 124 977 268 839 122 1858 90 938 203 1071 1057 153 298 1078 3 1
Low 1668 2830 747 356 1082 343 2498 2100 2757 215 384 553 18 906 1710 1 1
Below cutoff 2 30 27 3 18 1 2 1 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001255978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001255979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001255980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001255981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_130898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_045658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006711172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017000372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047446827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054334555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA652478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB052778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB052781 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF394167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF468007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK297703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK304665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309767 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL358472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY049977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF681098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB012316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KT584087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000271889   ⟹   ENSP00000271889
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,967,921 - 153,974,359 (+)Ensembl
RefSeq Acc Id: ENST00000368600   ⟹   ENSP00000357589
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,968,243 - 153,974,361 (+)Ensembl
RefSeq Acc Id: ENST00000368601   ⟹   ENSP00000357590
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,968,237 - 153,973,072 (+)Ensembl
RefSeq Acc Id: ENST00000368603   ⟹   ENSP00000357592
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,968,237 - 153,974,356 (+)Ensembl
RefSeq Acc Id: ENST00000368607   ⟹   ENSP00000357596
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,967,902 - 153,974,359 (+)Ensembl
RefSeq Acc Id: ENST00000431292   ⟹   ENSP00000402308
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,968,310 - 153,969,458 (+)Ensembl
RefSeq Acc Id: ENST00000449724   ⟹   ENSP00000391847
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,967,892 - 153,973,080 (+)Ensembl
RefSeq Acc Id: ENST00000461688
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,967,925 - 153,972,768 (+)Ensembl
RefSeq Acc Id: ENST00000468845
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,969,396 - 153,974,131 (+)Ensembl
RefSeq Acc Id: ENST00000473340
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,968,264 - 153,969,354 (+)Ensembl
RefSeq Acc Id: ENST00000477617
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,967,534 - 153,968,968 (+)Ensembl
RefSeq Acc Id: ENST00000479010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,968,259 - 153,969,311 (+)Ensembl
RefSeq Acc Id: ENST00000492729
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1153,968,261 - 153,973,019 (+)Ensembl
RefSeq Acc Id: NM_001255978   ⟹   NP_001242907
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,902 - 153,974,359 (+)NCBI
GRCh371153,940,315 - 153,946,840 (+)NCBI
HuRef1125,302,901 - 125,309,202 (+)NCBI
CHM1_11155,336,628 - 155,343,154 (+)NCBI
T2T-CHM13v2.01153,105,163 - 153,111,622 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001255979   ⟹   NP_001242908
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,968,250 - 153,974,359 (+)NCBI
GRCh371153,940,315 - 153,946,840 (+)NCBI
HuRef1125,302,901 - 125,309,202 (+)NCBI
CHM1_11155,336,988 - 155,343,154 (+)NCBI
T2T-CHM13v2.01153,105,511 - 153,111,622 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001255980   ⟹   NP_001242909
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,902 - 153,974,359 (+)NCBI
GRCh371153,940,315 - 153,946,840 (+)NCBI
HuRef1125,302,901 - 125,309,202 (+)NCBI
CHM1_11155,336,628 - 155,343,154 (+)NCBI
T2T-CHM13v2.01153,105,163 - 153,111,622 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001255981   ⟹   NP_001242910
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,968,250 - 153,974,359 (+)NCBI
GRCh371153,940,315 - 153,946,840 (+)NCBI
HuRef1125,302,901 - 125,309,202 (+)NCBI
CHM1_11155,336,988 - 155,343,154 (+)NCBI
T2T-CHM13v2.01153,105,511 - 153,111,622 (+)NCBI
Sequence:
RefSeq Acc Id: NM_130898   ⟹   NP_570968
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,902 - 153,974,359 (+)NCBI
GRCh371153,940,315 - 153,946,840 (+)NCBI
Build 361152,207,021 - 152,213,456 (+)NCBI Archive
Celera1127,012,147 - 127,018,583 (+)RGD
HuRef1125,302,901 - 125,309,202 (+)NCBI
CHM1_11155,336,628 - 155,343,154 (+)NCBI
T2T-CHM13v2.01153,105,163 - 153,111,622 (+)NCBI
Sequence:
RefSeq Acc Id: NR_045658
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,902 - 153,974,359 (+)NCBI
GRCh371153,940,315 - 153,946,840 (+)NCBI
HuRef1125,302,901 - 125,309,202 (+)NCBI
CHM1_11155,336,628 - 155,343,154 (+)NCBI
T2T-CHM13v2.01153,105,163 - 153,111,622 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006711172   ⟹   XP_006711235
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,902 - 153,974,359 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017000372   ⟹   XP_016855861
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,487 - 153,974,359 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024453343   ⟹   XP_024309111
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,487 - 153,974,359 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024453344   ⟹   XP_024309112
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,487 - 153,974,359 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024453346   ⟹   XP_024309114
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,968,250 - 153,974,359 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047446827   ⟹   XP_047302783
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,487 - 153,974,359 (+)NCBI
RefSeq Acc Id: XM_054334550   ⟹   XP_054190525
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01153,104,744 - 153,111,622 (+)NCBI
RefSeq Acc Id: XM_054334551   ⟹   XP_054190526
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01153,104,746 - 153,111,622 (+)NCBI
RefSeq Acc Id: XM_054334552   ⟹   XP_054190527
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01153,105,591 - 153,111,622 (+)NCBI
RefSeq Acc Id: XM_054334553   ⟹   XP_054190528
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01153,105,163 - 153,111,622 (+)NCBI
RefSeq Acc Id: XM_054334554   ⟹   XP_054190529
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01153,105,021 - 153,111,622 (+)NCBI
RefSeq Acc Id: XM_054334555   ⟹   XP_054190530
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01153,104,765 - 153,111,622 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001242907 (Get FASTA)   NCBI Sequence Viewer  
  NP_001242908 (Get FASTA)   NCBI Sequence Viewer  
  NP_001242909 (Get FASTA)   NCBI Sequence Viewer  
  NP_001242910 (Get FASTA)   NCBI Sequence Viewer  
  NP_570968 (Get FASTA)   NCBI Sequence Viewer  
  XP_006711235 (Get FASTA)   NCBI Sequence Viewer  
  XP_016855861 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309111 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309112 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309114 (Get FASTA)   NCBI Sequence Viewer  
  XP_047302783 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190525 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190526 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190527 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190528 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190529 (Get FASTA)   NCBI Sequence Viewer  
  XP_054190530 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH38962 (Get FASTA)   NCBI Sequence Viewer  
  AAL13157 (Get FASTA)   NCBI Sequence Viewer  
  AAL76113 (Get FASTA)   NCBI Sequence Viewer  
  AAO33070 (Get FASTA)   NCBI Sequence Viewer  
  BAC45035 (Get FASTA)   NCBI Sequence Viewer  
  BAC45224 (Get FASTA)   NCBI Sequence Viewer  
  BAG60061 (Get FASTA)   NCBI Sequence Viewer  
  BAG65125 (Get FASTA)   NCBI Sequence Viewer  
  BAG65440 (Get FASTA)   NCBI Sequence Viewer  
  EAW53251 (Get FASTA)   NCBI Sequence Viewer  
  EAW53252 (Get FASTA)   NCBI Sequence Viewer  
  EAW53253 (Get FASTA)   NCBI Sequence Viewer  
  EAW53254 (Get FASTA)   NCBI Sequence Viewer  
  EAW53255 (Get FASTA)   NCBI Sequence Viewer  
  EAW53256 (Get FASTA)   NCBI Sequence Viewer  
  EAW53257 (Get FASTA)   NCBI Sequence Viewer  
  EAW53258 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000271889
  ENSP00000271889.4
  ENSP00000357589
  ENSP00000357589.3
  ENSP00000357590.1
  ENSP00000357592
  ENSP00000357592.1
  ENSP00000357596
  ENSP00000357596.3
  ENSP00000391847.1
  ENSP00000402308.1
GenBank Protein Q8TEY5 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_570968   ⟸   NM_130898
- Peptide Label: isoform 1
- UniProtKB: Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot),   Q8TEY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001242907   ⟸   NM_001255978
- Peptide Label: isoform 1
- UniProtKB: Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot),   Q8TEY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001242909   ⟸   NM_001255980
- Peptide Label: isoform 2
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001242908   ⟸   NM_001255979
- Peptide Label: isoform 1
- UniProtKB: Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot),   Q8TEY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001242910   ⟸   NM_001255981
- Peptide Label: isoform 2
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006711235   ⟸   XM_006711172
- Peptide Label: isoform X2
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016855861   ⟸   XM_017000372
- Peptide Label: isoform X2
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_024309111   ⟸   XM_024453343
- Peptide Label: isoform X1
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot),   Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_024309112   ⟸   XM_024453344
- Peptide Label: isoform X1
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot),   Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_024309114   ⟸   XM_024453346
- Peptide Label: isoform X1
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot),   Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000271889   ⟸   ENST00000271889
RefSeq Acc Id: ENSP00000402308   ⟸   ENST00000431292
RefSeq Acc Id: ENSP00000357589   ⟸   ENST00000368600
RefSeq Acc Id: ENSP00000357596   ⟸   ENST00000368607
RefSeq Acc Id: ENSP00000357590   ⟸   ENST00000368601
RefSeq Acc Id: ENSP00000357592   ⟸   ENST00000368603
RefSeq Acc Id: ENSP00000391847   ⟸   ENST00000449724
RefSeq Acc Id: XP_047302783   ⟸   XM_047446827
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054190525   ⟸   XM_054334550
- Peptide Label: isoform X1
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot),   Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190526   ⟸   XM_054334551
- Peptide Label: isoform X1
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot),   Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054190530   ⟸   XM_054334555
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054190529   ⟸   XM_054334554
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054190528   ⟸   XM_054334553
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054190527   ⟸   XM_054334552
- Peptide Label: isoform X1
- UniProtKB: Q8TEY5 (UniProtKB/Swiss-Prot),   Q5T4L0 (UniProtKB/Swiss-Prot),   D3DV62 (UniProtKB/Swiss-Prot),   Q86YW6 (UniProtKB/Swiss-Prot)
Protein Domains
bZIP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8TEY5-F1-model_v2 AlphaFold Q8TEY5 1-395 view protein structure

Promoters
RGD ID:6784964
Promoter ID:HG_KWN:5244
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000368601,   ENST00000368607,   ENST00000405694,   OTTHUMT00000090290,   OTTHUMT00000090294,   OTTHUMT00000090295,   OTTHUMT00000090296,   OTTHUMT00000090297,   OTTHUMT00000090298,   OTTHUMT00000090299,   OTTHUMT00000090300,   UC001FDO.2,   UC001FDP.1,   UC001FDQ.1,   UC001FDR.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361152,205,696 - 152,207,712 (+)MPROMDB
RGD ID:6784963
Promoter ID:HG_KWN:5245
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562,   Lymphoblastoid
Transcripts:OTTHUMT00000090302
Position:
Human AssemblyChrPosition (strand)Source
Build 361152,208,114 - 152,208,614 (+)MPROMDB
RGD ID:6809535
Promoter ID:HG_ACW:4160
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:CREB3L4.LAPR07-UNSPLICED
Position:
Human AssemblyChrPosition (strand)Source
Build 361152,211,746 - 152,212,246 (+)MPROMDB
RGD ID:6857296
Promoter ID:EPDNEW_H1813
Type:initiation region
Name:CREB3L4_2
Description:cAMP responsive element binding protein 3 like 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1815  EPDNEW_H1816  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,487 - 153,967,547EPDNEW
RGD ID:6857300
Promoter ID:EPDNEW_H1815
Type:initiation region
Name:CREB3L4_1
Description:cAMP responsive element binding protein 3 like 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1813  EPDNEW_H1816  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,967,902 - 153,967,962EPDNEW
RGD ID:6857302
Promoter ID:EPDNEW_H1816
Type:initiation region
Name:CREB3L4_3
Description:cAMP responsive element binding protein 3 like 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H1813  EPDNEW_H1815  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381153,968,250 - 153,968,310EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:18854 AgrOrtholog
COSMIC CREB3L4 COSMIC
Ensembl Genes ENSG00000143578 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000271889 ENTREZGENE
  ENST00000271889.8 UniProtKB/Swiss-Prot
  ENST00000368600 ENTREZGENE
  ENST00000368600.7 UniProtKB/Swiss-Prot
  ENST00000368601.5 UniProtKB/TrEMBL
  ENST00000368603 ENTREZGENE
  ENST00000368603.5 UniProtKB/Swiss-Prot
  ENST00000368607 ENTREZGENE
  ENST00000368607.8 UniProtKB/Swiss-Prot
  ENST00000431292.1 UniProtKB/TrEMBL
  ENST00000449724.5 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.170 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000143578 GTEx
HGNC ID HGNC:18854 ENTREZGENE
Human Proteome Map CREB3L4 Human Proteome Map
InterPro bZIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  bZIP_sf UniProtKB/Swiss-Prot
  TF_DNA-bd_sf UniProtKB/TrEMBL
KEGG Report hsa:148327 UniProtKB/Swiss-Prot
NCBI Gene 148327 ENTREZGENE
OMIM 607138 OMIM
PANTHER AGAP001464-PB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR45996:SF2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam bZIP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA134922919 PharmGKB
PROSITE BZIP UniProtKB/Swiss-Prot
SMART BRLZ UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47454 UniProtKB/TrEMBL
  SSF57959 UniProtKB/Swiss-Prot
UniProt CR3L4_HUMAN UniProtKB/Swiss-Prot
  D3DV62 ENTREZGENE
  Q5T4K9_HUMAN UniProtKB/TrEMBL
  Q5T4L0 ENTREZGENE
  Q5T4L1_HUMAN UniProtKB/TrEMBL
  Q5T4L2_HUMAN UniProtKB/TrEMBL
  Q86YW6 ENTREZGENE
  Q8TEY5 ENTREZGENE
UniProt Secondary D3DV62 UniProtKB/Swiss-Prot
  Q5T4L0 UniProtKB/Swiss-Prot
  Q86YW6 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-07 CREB3L4  cAMP responsive element binding protein 3 like 4    cAMP responsive element binding protein 3-like 4  Symbol and/or name change 5135510 APPROVED