PAEP (progestagen associated endometrial protein) - Rat Genome Database

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Gene: PAEP (progestagen associated endometrial protein) Homo sapiens
Analyze
Symbol: PAEP
Name: progestagen associated endometrial protein
RGD ID: 1347038
HGNC Page HGNC
Description: Predicted to have odorant binding activity. Involved in several processes, including negative regulation of sperm capacitation; positive regulation of granulocyte macrophage colony-stimulating factor production; and regulation of binding activity of sperm to zona pellucida. Localizes to extracellular region.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: alpha uterine protein; GD; GdA; GdF; GdS; glycodelin; glycodelin-A; glycodelin-F; glycodelin-S; MGC138509; MGC142288; PAEG; PEG; PEP; placental protein 14; PP14; PP14 protein (placental protein 14); pregnancy-associated endometrial alpha-2 globulin; pregnancy-associated endometrial alpha-2-globulin; progestagen-associated endometrial protein (placental protein 14, pregnancy-associated endometrial a; progesterone-associated endometrial protein; ZIF-1; zona-binding inhibitory factor-1
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Related Pseudogenes: PAEPP1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9135,561,756 - 135,566,955 (+)EnsemblGRCh38hg38GRCh38
GRCh389135,561,627 - 135,566,955 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379138,453,602 - 138,458,801 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369137,593,425 - 137,598,443 (+)NCBINCBI36hg18NCBI36
Build 349135,679,548 - 135,684,567NCBI
Celera9108,970,476 - 108,975,523 (+)NCBI
Cytogenetic Map9q34.3NCBI
HuRef9107,915,451 - 107,920,498 (+)NCBIHuRef
CHM1_19138,602,183 - 138,607,211 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
1. GOA_HUMAN data from the GO Consortium
2. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2006183   PMID:2016092   PMID:2113930   PMID:2206398   PMID:2380618   PMID:2975952   PMID:3135704   PMID:3194393   PMID:3320533   PMID:3569148   PMID:3667877   PMID:3768286  
PMID:6776278   PMID:7047733   PMID:7592613   PMID:7829063   PMID:8025274   PMID:8452641   PMID:8943270   PMID:9166287   PMID:9239694   PMID:9274854   PMID:9591048   PMID:11023837  
PMID:11058744   PMID:11058757   PMID:11278680   PMID:11818517   PMID:11884441   PMID:12202458   PMID:12351556   PMID:12477932   PMID:12556471   PMID:12654469   PMID:12672671   PMID:12826085  
PMID:14679205   PMID:14702039   PMID:14764802   PMID:14973265   PMID:15016783   PMID:15164053   PMID:15489334   PMID:15494501   PMID:15527767   PMID:15883155   PMID:16123169   PMID:16169070  
PMID:16269626   PMID:16325596   PMID:16647384   PMID:16759928   PMID:17049713   PMID:17068141   PMID:17070198   PMID:17132480   PMID:17148576   PMID:17156191   PMID:17192260   PMID:17207965  
PMID:17329396   PMID:17482165   PMID:17570010   PMID:17649816   PMID:17716661   PMID:17720699   PMID:18029348   PMID:18155767   PMID:18203874   PMID:18256018   PMID:18402941   PMID:18720404  
PMID:18996219   PMID:19032611   PMID:19195690   PMID:19224449   PMID:19520712   PMID:19609241   PMID:19683346   PMID:19759913   PMID:19799645   PMID:19857900   PMID:19903048   PMID:19945098  
PMID:20040080   PMID:20592348   PMID:20592354   PMID:20638131   PMID:20676758   PMID:20843776   PMID:20880745   PMID:20886106   PMID:21168900   PMID:21227941   PMID:21292383   PMID:21832049  
PMID:21873635   PMID:21880722   PMID:21999200   PMID:22239027   PMID:22296396   PMID:22313865   PMID:22563871   PMID:22748851   PMID:22977256   PMID:23036050   PMID:23392770   PMID:23461865  
PMID:23585335   PMID:23670949   PMID:24060634   PMID:24377825   PMID:24518545   PMID:24733737   PMID:25416956   PMID:25422905   PMID:25693804   PMID:25747132   PMID:25785839   PMID:25901080  
PMID:26496610   PMID:26631447   PMID:26757357   PMID:27373413   PMID:28683601   PMID:28738719   PMID:29749501   PMID:29892012   PMID:30535430   PMID:31515488   PMID:32205858   PMID:32296183  


Genomics

Comparative Map Data
PAEP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl9135,561,756 - 135,566,955 (+)EnsemblGRCh38hg38GRCh38
GRCh389135,561,627 - 135,566,955 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh379138,453,602 - 138,458,801 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369137,593,425 - 137,598,443 (+)NCBINCBI36hg18NCBI36
Build 349135,679,548 - 135,684,567NCBI
Celera9108,970,476 - 108,975,523 (+)NCBI
Cytogenetic Map9q34.3NCBI
HuRef9107,915,451 - 107,920,498 (+)NCBIHuRef
CHM1_19138,602,183 - 138,607,211 (+)NCBICHM1_1
Lcn11
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39225,667,029 - 25,670,291 (+)NCBIGRCm39mm39
GRCm39 Ensembl225,667,029 - 25,670,291 (+)Ensembl
GRCm38225,777,017 - 25,780,279 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl225,777,017 - 25,780,279 (+)EnsemblGRCm38mm10GRCm38
MGSCv37225,632,537 - 25,635,799 (+)NCBIGRCm37mm9NCBIm37
MGSCv36225,599,026 - 25,602,288 (+)NCBImm8
Celera225,503,112 - 25,506,377 (+)NCBICelera
Cytogenetic Map2A3NCBI
Paep
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.238,531,136 - 8,534,430 (-)NCBI
Rnor_6.032,935,396 - 2,938,883 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.038,599,189 - 8,602,477 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.433,883,332 - 3,886,626 (-)NCBIRGSC3.4rn4RGSC3.4
Celera33,431,983 - 3,435,265 (+)NCBICelera
Cytogenetic Map3p13NCBI
PAEP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19135,667,342 - 135,672,464 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v09106,669,550 - 106,681,918 (+)NCBIMhudiblu_PPA_v0panPan3
LOC491264
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1949,688,619 - 49,691,690 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha948,941,038 - 48,944,094 (-)NCBI
ROS_Cfam_1.0950,560,576 - 50,563,664 (-)NCBI
UMICH_Zoey_3.1949,323,083 - 49,326,182 (-)NCBI
UNSW_CanFamBas_1.0949,637,519 - 49,640,591 (-)NCBI
UU_Cfam_GSD_1.0949,687,848 - 49,690,939 (-)NCBI
PAEP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21308,664,373 - 308,669,075 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103239650
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1122,624,894 - 2,630,817 (-)NCBI
ChlSab1.1 Ensembl122,625,017 - 2,630,602 (-)Ensembl

Position Markers
WI-18065  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379138,458,618 - 138,458,768UniSTSGRCh37
Build 369137,598,439 - 137,598,589RGDNCBI36
Celera9108,975,519 - 108,975,669RGD
Cytogenetic Map9q34UniSTS
HuRef9107,920,494 - 107,920,644UniSTS
GeneMap99-GB4 RH Map9415.92UniSTS
Whitehead-RH Map9499.1UniSTS
D10S275  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map13q12.13UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map14q22-q24UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map10p11UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map6q24UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map3p25UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic MapXp22.2-p22.1UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map20pter-q11.23UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.3UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map3q26.3UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map1q24-q25.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map12q24.32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map11p14.3UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map6q24.3UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map6q12-q13UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map2p14UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
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Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS
G06418  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh379138,457,648 - 138,458,599UniSTSGRCh37
Celera9108,974,549 - 108,975,500UniSTS
Cytogenetic Map9q34UniSTS
HuRef9107,919,524 - 107,920,475UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2435
Count of miRNA genes:637
Interacting mature miRNAs:712
Transcripts:ENST00000277508, ENST00000371766, ENST00000371768, ENST00000418284, ENST00000433563, ENST00000454923, ENST00000457014, ENST00000479141
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High 3 5 2
Medium 3 1 18 17 5 17 21 1 3 5 81 24 1 1 2
Low 58 29 55 50 38 38 1026 16 35 46 509 217 16 53 570 2
Below cutoff 482 449 370 136 464 87 851 231 853 129 399 564 56 376 363 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001018048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001018049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_002571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011518752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK304657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK309983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL354761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC069451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC069562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC112304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC421713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ884407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J04129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M34046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M61886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000277508   ⟹   ENSP00000277508
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,561,777 - 135,566,776 (+)Ensembl
RefSeq Acc Id: ENST00000371766   ⟹   ENSP00000360831
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,561,767 - 135,566,776 (+)Ensembl
RefSeq Acc Id: ENST00000371768   ⟹   ENSP00000431712
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,561,756 - 135,566,776 (+)Ensembl
RefSeq Acc Id: ENST00000418284   ⟹   ENSP00000401933
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,562,342 - 135,566,228 (+)Ensembl
RefSeq Acc Id: ENST00000433563   ⟹   ENSP00000394216
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,561,846 - 135,566,955 (+)Ensembl
RefSeq Acc Id: ENST00000454923   ⟹   ENSP00000404033
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,562,362 - 135,566,783 (+)Ensembl
RefSeq Acc Id: ENST00000457014   ⟹   ENSP00000396196
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,565,432 - 135,566,666 (+)Ensembl
RefSeq Acc Id: ENST00000479141   ⟹   ENSP00000417898
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,561,756 - 135,566,955 (+)Ensembl
RefSeq Acc Id: ENST00000611414   ⟹   ENSP00000484659
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl9135,561,758 - 135,566,776 (+)Ensembl
RefSeq Acc Id: NM_001018048   ⟹   NP_001018058
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,955 (+)NCBI
CHM1_19138,602,183 - 138,607,211 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001018049   ⟹   NP_001018059
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,955 (+)NCBI
GRCh379138,453,601 - 138,458,622 (+)NCBI
Build 369137,593,425 - 137,598,443 (+)NCBI Archive
HuRef9107,915,451 - 107,920,498 (+)ENTREZGENE
CHM1_19138,602,183 - 138,607,211 (+)NCBI
Sequence:
RefSeq Acc Id: NM_002571   ⟹   NP_002562
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,955 (+)NCBI
GRCh379138,453,601 - 138,458,622 (+)NCBI
Build 369137,593,425 - 137,598,443 (+)NCBI Archive
HuRef9107,915,451 - 107,920,498 (+)ENTREZGENE
CHM1_19138,602,183 - 138,607,211 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518745   ⟹   XP_011517047
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518746   ⟹   XP_011517048
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518747   ⟹   XP_011517049
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518748   ⟹   XP_011517050
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518749   ⟹   XP_011517051
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518751   ⟹   XP_011517053
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011518752   ⟹   XP_011517054
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017014782   ⟹   XP_016870271
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,627 - 135,566,776 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017014783   ⟹   XP_016870272
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,564,349 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001018058 (Get FASTA)   NCBI Sequence Viewer  
  NP_001018059 (Get FASTA)   NCBI Sequence Viewer  
  NP_002562 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517047 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517048 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517049 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517050 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517051 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517053 (Get FASTA)   NCBI Sequence Viewer  
  XP_011517054 (Get FASTA)   NCBI Sequence Viewer  
  XP_016870271 (Get FASTA)   NCBI Sequence Viewer  
  XP_016870272 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA35801 (Get FASTA)   NCBI Sequence Viewer  
  AAA35802 (Get FASTA)   NCBI Sequence Viewer  
  AAA60147 (Get FASTA)   NCBI Sequence Viewer  
  AAA60148 (Get FASTA)   NCBI Sequence Viewer  
  AAH69451 (Get FASTA)   NCBI Sequence Viewer  
  AAH69562 (Get FASTA)   NCBI Sequence Viewer  
  AAI12305 (Get FASTA)   NCBI Sequence Viewer  
  AAI13729 (Get FASTA)   NCBI Sequence Viewer  
  ABI63374 (Get FASTA)   NCBI Sequence Viewer  
  BAG34756 (Get FASTA)   NCBI Sequence Viewer  
  BAG65432 (Get FASTA)   NCBI Sequence Viewer  
  EAW88163 (Get FASTA)   NCBI Sequence Viewer  
  EAW88164 (Get FASTA)   NCBI Sequence Viewer  
  EAW88165 (Get FASTA)   NCBI Sequence Viewer  
  EAW88166 (Get FASTA)   NCBI Sequence Viewer  
  EAW88167 (Get FASTA)   NCBI Sequence Viewer  
  EAW88168 (Get FASTA)   NCBI Sequence Viewer  
  P09466 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001018059   ⟸   NM_001018049
- Peptide Label: isoform 1 precursor
- UniProtKB: P09466 (UniProtKB/Swiss-Prot),   A0A024R8D8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_002562   ⟸   NM_002571
- Peptide Label: isoform 1 precursor
- UniProtKB: P09466 (UniProtKB/Swiss-Prot),   B2R4F9 (UniProtKB/TrEMBL),   A0A024R8D8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011517048   ⟸   XM_011518746
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011517049   ⟸   XM_011518747
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011517047   ⟸   XM_011518745
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011517051   ⟸   XM_011518749
- Peptide Label: isoform X3
- UniProtKB: P09466 (UniProtKB/Swiss-Prot),   A0A024R8D8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011517054   ⟸   XM_011518752
- Peptide Label: isoform X5
- UniProtKB: A6XNE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011517050   ⟸   XM_011518748
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011517053   ⟸   XM_011518751
- Peptide Label: isoform X4
- UniProtKB: P09466 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001018058   ⟸   NM_001018048
- Peptide Label: isoform 2 precursor
- UniProtKB: P09466 (UniProtKB/Swiss-Prot),   B4E3C0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016870271   ⟸   XM_017014782
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_016870272   ⟸   XM_017014783
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: ENSP00000360831   ⟸   ENST00000371766
RefSeq Acc Id: ENSP00000431712   ⟸   ENST00000371768
RefSeq Acc Id: ENSP00000417898   ⟸   ENST00000479141
RefSeq Acc Id: ENSP00000484659   ⟸   ENST00000611414
RefSeq Acc Id: ENSP00000404033   ⟸   ENST00000454923
RefSeq Acc Id: ENSP00000401933   ⟸   ENST00000418284
RefSeq Acc Id: ENSP00000396196   ⟸   ENST00000457014
RefSeq Acc Id: ENSP00000394216   ⟸   ENST00000433563
RefSeq Acc Id: ENSP00000277508   ⟸   ENST00000277508
Protein Domains
Lipocln_cytosolic_FA-bd_dom

Promoters
RGD ID:7216605
Promoter ID:EPDNEW_H14049
Type:multiple initiation site
Name:PAEP_1
Description:progestagen associated endometrial protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh389135,561,756 - 135,561,816EPDNEW
RGD ID:6807437
Promoter ID:HG_KWN:65537
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:ENST00000344007,   ENST00000371768,   NM_001018049,   OTTHUMT00000055013,   OTTHUMT00000055014,   OTTHUMT00000055016,   OTTHUMT00000055017,   UC004CGF.1,   UC004CGG.1,   UC010NAW.1,   UC010NAX.1,   UC010NAY.1,   UC010NAZ.1,   UC010NBA.1,   UC010NBC.1
Position:
Human AssemblyChrPosition (strand)Source
Build 369137,593,146 - 137,593,646 (+)MPROMDB

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000050348] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:122792658-138124532)x3 copy number gain See cases [RCV000051040] Chr9:122792658..138124532 [GRCh38]
Chr9:125554937..141018984 [GRCh37]
Chr9:124594758..140138805 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:121112395-138075224)x3 copy number gain See cases [RCV000051009] Chr9:121112395..138075224 [GRCh38]
Chr9:123874673..140969676 [GRCh37]
Chr9:122914494..140089497 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
GRCh38/hg38 9q34.3(chr9:135452016-137613738)x1 copy number loss See cases [RCV000052937] Chr9:135452016..137613738 [GRCh38]
Chr9:138343862..140508190 [GRCh37]
Chr9:137483683..139628011 [NCBI36]
Chr9:9q34.3
pathogenic
GRCh38/hg38 9q34.2-34.3(chr9:134428674-138154922)x1 copy number loss See cases [RCV000052936] Chr9:134428674..138154922 [GRCh38]
Chr9:137320520..141049374 [GRCh37]
Chr9:136460341..140169195 [NCBI36]
Chr9:9q34.2-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124532)x3 copy number gain See cases [RCV000053745] Chr9:193412..138124532 [GRCh38]
Chr9:204193..141018984 [GRCh37]
Chr9:194193..140138805 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q34.11-34.3(chr9:129068560-136495351)x3 copy number gain See cases [RCV000053779] Chr9:129068560..136495351 [GRCh38]
Chr9:131830839..139389803 [GRCh37]
Chr9:130870660..138509624 [NCBI36]
Chr9:9q34.11-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|See cases [RCV000053748] Chr9:193412..138179445 [GRCh38]
Chr9:266045..141073897 [GRCh37]
Chr9:256045..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q34.2-34.3(chr9:134174698-138138735)x3 copy number gain See cases [RCV000053814] Chr9:134174698..138138735 [GRCh38]
Chr9:137091194..141033187 [GRCh37]
Chr9:136029641..140153008 [NCBI36]
Chr9:9q34.2-34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:121586837-138179445)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053776]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053776]|See cases [RCV000053776] Chr9:121586837..138179445 [GRCh38]
Chr9:124349116..141073897 [GRCh37]
Chr9:123388937..140193718 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3 copy number gain See cases [RCV000053746] Chr9:193412..138114463 [GRCh38]
Chr9:214367..141008915 [GRCh37]
Chr9:204367..140128736 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445) copy number gain See cases [RCV000133791] Chr9:204193..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q34.11-34.3(chr9:130513207-138124532)x3 copy number gain See cases [RCV000133778] Chr9:130513207..138124532 [GRCh38]
Chr9:133388594..141018984 [GRCh37]
Chr9:132378415..140138805 [NCBI36]
Chr9:9q34.11-34.3
pathogenic
GRCh38/hg38 9q34.3(chr9:135164984-136437047)x3 copy number gain See cases [RCV000134910] Chr9:135164984..136437047 [GRCh38]
Chr9:138056830..139331499 [GRCh37]
Chr9:137196651..138451320 [NCBI36]
Chr9:9q34.3
uncertain significance
GRCh38/hg38 9q34.11-34.3(chr9:129068560-138179445)x3 copy number gain See cases [RCV000134916] Chr9:129068560..138179445 [GRCh38]
Chr9:131830839..141073897 [GRCh37]
Chr9:130870660..140193718 [NCBI36]
Chr9:9q34.11-34.3
pathogenic
GRCh38/hg38 9q33.2-34.3(chr9:121073102-138179445)x3 copy number gain See cases [RCV000134920] Chr9:121073102..138179445 [GRCh38]
Chr9:123835380..141073897 [GRCh37]
Chr9:122875201..140193718 [NCBI36]
Chr9:9q33.2-34.3
pathogenic
GRCh38/hg38 9q34.13-34.3(chr9:132986903-138114463)x3 copy number gain See cases [RCV000136790] Chr9:132986903..138114463 [GRCh38]
Chr9:135862290..141008915 [GRCh37]
Chr9:134852111..140128736 [NCBI36]
Chr9:9q34.13-34.3
pathogenic
GRCh38/hg38 9q34.2-34.3(chr9:133504071-138159073)x3 copy number gain See cases [RCV000137825] Chr9:133504071..138159073 [GRCh38]
Chr9:136324358..141053525 [GRCh37]
Chr9:135314179..140173346 [NCBI36]
Chr9:9q34.2-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3 copy number gain See cases [RCV000138783] Chr9:193412..138124524 [GRCh38]
Chr9:204090..141018976 [GRCh37]
Chr9:194090..140138797 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000139207] Chr9:193412..138159073 [GRCh38]
Chr9:68420641..141053525 [GRCh37]
Chr9:67910461..140173346 [NCBI36]
Chr9:9p11.2-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000138962] Chr9:193412..138159073 [GRCh38]
Chr9:204104..141053525 [GRCh37]
Chr9:194104..140173346 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic|conflicting data from submitters
GRCh38/hg38 9q34.2-34.3(chr9:133996227-138124524)x3 copy number gain See cases [RCV000139807] Chr9:133996227..138124524 [GRCh38]
Chr9:136861349..141018976 [GRCh37]
Chr9:135851170..140138797 [NCBI36]
Chr9:9q34.2-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3 copy number gain See cases [RCV000141876] Chr9:203861..138125937 [GRCh38]
Chr9:203861..141020389 [GRCh37]
Chr9:193861..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9q34.2-34.3(chr9:133918071-138159073)x3 copy number gain See cases [RCV000142955] Chr9:133918071..138159073 [GRCh38]
Chr9:136783193..141053525 [GRCh37]
Chr9:135773014..140173346 [NCBI36]
Chr9:9q34.2-34.3
pathogenic
GRCh38/hg38 9q34.13-34.3(chr9:132386553-138059695)x3 copy number gain See cases [RCV000142636] Chr9:132386553..138059695 [GRCh38]
Chr9:135261940..140954147 [GRCh37]
Chr9:134251761..140073968 [NCBI36]
Chr9:9q34.13-34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3 copy number gain See cases [RCV000143476] Chr9:203862..138125937 [GRCh38]
Chr9:203862..141020389 [GRCh37]
Chr9:193862..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000148113] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3 copy number gain See cases [RCV000240081] Chr9:163131..141122114 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407) copy number gain See cases [RCV000449375] Chr9:62525..141006407 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q34.3(chr9:138222049-141018925)x1 copy number loss See cases [RCV000446074] Chr9:138222049..141018925 [GRCh37]
Chr9:9q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3 copy number gain See cases [RCV000447207] Chr9:203861..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q33.3-34.3(chr9:128652785-141044751)x3 copy number gain See cases [RCV000447080] Chr9:128652785..141044751 [GRCh37]
Chr9:9q33.3-34.3
pathogenic
GRCh37/hg19 9q33.2-34.3(chr9:124642754-141146461)x3 copy number gain See cases [RCV000448784] Chr9:124642754..141146461 [GRCh37]
Chr9:9q33.2-34.3
pathogenic
GRCh37/hg19 9q34.3(chr9:138222049-138711104)x3 copy number gain See cases [RCV000448897] Chr9:138222049..138711104 [GRCh37]
Chr9:9q34.3
uncertain significance
GRCh37/hg19 9p24.3-q34.3(chr9:203864-141020389)x3 copy number gain See cases [RCV000448978] Chr9:203864..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q34.3(chr9:138209358-141020389)x1 copy number loss See cases [RCV000510584] Chr9:138209358..141020389 [GRCh37]
Chr9:9q34.3
pathogenic
GRCh37/hg19 9q34.3(chr9:138275621-141020389)x3 copy number gain See cases [RCV000511188] Chr9:138275621..141020389 [GRCh37]
Chr9:9q34.3
likely pathogenic
GRCh37/hg19 9q34.13-34.3(chr9:135377559-141213431)x1 copy number loss mTOR Inhibitor response [RCV000626442] Chr9:135377559..141213431 [GRCh37]
Chr9:9q34.13-34.3
drug response
GRCh37/hg19 9q21.11-34.3(chr9:71069743-140999928) copy number gain Global developmental delay [RCV000626548] Chr9:71069743..140999928 [GRCh37]
Chr9:9q21.11-34.3
likely pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389) copy number gain See cases [RCV000512392] Chr9:203862..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q34.3(chr9:137736478-138563159)x3 copy number gain not provided [RCV000683146] Chr9:137736478..138563159 [GRCh37]
Chr9:9q34.3
uncertain significance
GRCh37/hg19 9q34.13-34.3(chr9:135105971-141020389)x3 copy number gain not provided [RCV000683160] Chr9:135105971..141020389 [GRCh37]
Chr9:9q34.13-34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141122247)x3 copy number gain not provided [RCV000748055] Chr9:10590..141122247 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9q34.3(chr9:137816459-141114095)x1 copy number loss not provided [RCV000748787] Chr9:137816459..141114095 [GRCh37]
Chr9:9q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141107672)x3 copy number gain not provided [RCV000748053] Chr9:10590..141107672 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:46587-141066491)x3 copy number gain not provided [RCV000748063] Chr9:46587..141066491 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141114095)x2 copy number gain not provided [RCV000748054] Chr9:10590..141114095 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
NM_002571.4(PAEP):c.390C>T (p.Thr130=) single nucleotide variant not provided [RCV000973033] Chr9:135564323 [GRCh38]
Chr9:138456169 [GRCh37]
Chr9:9q34.3
benign
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3 copy number gain not provided [RCV000845900] Chr9:203861..141020388 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
NM_002571.4(PAEP):c.27C>T (p.Gly9=) single nucleotide variant not provided [RCV000962394] Chr9:135561828 [GRCh38]
Chr9:138453674 [GRCh37]
Chr9:9q34.3
benign
NM_002571.4(PAEP):c.311-444_*248del deletion Kleefstra syndrome 1 [RCV000825025] Chr9:135563800..135566800 [GRCh38]
Chr9:138455646..138458646 [GRCh37]
Chr9:9q34.3
pathogenic
GRCh37/hg19 9q21.11-34.3(chr9:71416475-141020389)x3 copy number gain not provided [RCV000847808] Chr9:71416475..141020389 [GRCh37]
Chr9:9q21.11-34.3
pathogenic
NC_000009.11:g.(?_134379574)_(138678377_?)dup duplication Ehlers-Danlos syndrome, classic type [RCV000807925] Chr9:134379574..138678377 [GRCh37]
Chr9:9q34.13-34.3
uncertain significance
GRCh37/hg19 9q34.3(chr9:138023579-138498904)x3 copy number gain not provided [RCV001006280] Chr9:138023579..138498904 [GRCh37]
Chr9:9q34.3
uncertain significance
NM_002571.4(PAEP):c.536G>A (p.Arg179His) single nucleotide variant not provided [RCV000885458] Chr9:135565794 [GRCh38]
Chr9:138457640 [GRCh37]
Chr9:9q34.3
likely benign
NM_002571.4(PAEP):c.495A>G (p.Leu165=) single nucleotide variant not provided [RCV000909272] Chr9:135565483 [GRCh38]
Chr9:138457329 [GRCh37]
Chr9:9q34.3
likely benign
NM_002571.4(PAEP):c.204C>T (p.Pro68=) single nucleotide variant not provided [RCV000889814] Chr9:135562401 [GRCh38]
Chr9:138454247 [GRCh37]
Chr9:9q34.3
benign
GRCh37/hg19 9q34.3(chr9:138225001-141015001) copy number loss Microcephaly [RCV001252947] Chr9:138225001..141015001 [GRCh37]
Chr9:9q34.3
pathogenic
GRCh37/hg19 9q34.3(chr9:137880493-138781516)x3 copy number gain See cases [RCV001194592] Chr9:137880493..138781516 [GRCh37]
Chr9:9q34.3
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:8573 AgrOrtholog
COSMIC PAEP COSMIC
Ensembl Genes ENSG00000122133 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000277508 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000360831 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000394216 UniProtKB/TrEMBL
  ENSP00000396196 UniProtKB/TrEMBL
  ENSP00000401933 UniProtKB/TrEMBL
  ENSP00000404033 UniProtKB/TrEMBL
  ENSP00000417898 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000431712 UniProtKB/TrEMBL
  ENSP00000484659 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENST00000277508 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000371766 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000371768 UniProtKB/TrEMBL
  ENST00000418284 UniProtKB/TrEMBL
  ENST00000433563 UniProtKB/TrEMBL
  ENST00000454923 UniProtKB/TrEMBL
  ENST00000457014 UniProtKB/TrEMBL
  ENST00000479141 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000611414 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 2.40.128.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000122133 GTEx
HGNC ID HGNC:8573 ENTREZGENE
Human Proteome Map PAEP Human Proteome Map
InterPro Blactoglobulin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Calycin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipocalin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipocalin_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lipocln_cytosolic_FA-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:5047 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 5047 ENTREZGENE
OMIM 173310 OMIM
PANTHER PTHR11430 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Lipocalin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA32904 PharmGKB
PRINTS BLCTOGLOBULN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE LIPOCALIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50814 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A024R8D8 ENTREZGENE, UniProtKB/TrEMBL
  A6XNE0 ENTREZGENE, UniProtKB/TrEMBL
  B2R4F9 ENTREZGENE, UniProtKB/TrEMBL
  B4E3C0 ENTREZGENE, UniProtKB/TrEMBL
  F2Z349_HUMAN UniProtKB/TrEMBL
  H0Y4U4_HUMAN UniProtKB/TrEMBL
  H0Y530_HUMAN UniProtKB/TrEMBL
  H0Y6A4_HUMAN UniProtKB/TrEMBL
  P09466 ENTREZGENE, UniProtKB/Swiss-Prot
  Q5T6T6_HUMAN UniProtKB/TrEMBL
UniProt Secondary Q5T6T1 UniProtKB/Swiss-Prot
  Q9UG92 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-28 PAEP  progestagen associated endometrial protein    progestagen-associated endometrial protein  Symbol and/or name change 5135510 APPROVED
2011-08-16 PAEP  progestagen-associated endometrial protein  PAEP  progestagen-associated endometrial protein  Symbol and/or name change 5135510 APPROVED