WNT5B (Wnt family member 5B) - Rat Genome Database

Name: WNT5B
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: WNT5B (Wnt family member 5B) Homo sapiens

Analyze

Symbol:

WNT5B

Name:

Wnt family member 5B

RGD ID:

1346792

HGNC Page

HGNC:16265

Description:

Enables signaling receptor binding activity. Involved in chondrocyte differentiation and positive regulation of cell migration. Located in extracellular exosome. Colocalizes with collagen-containing extracellular matrix. Biomarker of leiomyoma.

Type:

protein-coding

RefSeq Status:

REVIEWED

Previously known as:

MGC2648; protein Wnt-5b; wingless-type MMTV integration site family member 5B; wingless-type MMTV integration site family, member 5B; WNT-5B protein

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Mus musculus (house mouse):	Wnt5b (wingless-type MMTV integration site family, member 5B)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Wnt5b (Wnt family member 5B)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, Treefam
Chinchilla lanigera (long-tailed chinchilla):	Wnt5b (Wnt family member 5B)	NCBI	Ortholog
Pan paniscus (bonobo/pygmy chimpanzee):	WNT5B (Wnt family member 5B)	NCBI	Ortholog
Canis lupus familiaris (dog):	WNT5B (Wnt family member 5B)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoMCL, Panther, Treefam
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Wnt5b (Wnt family member 5B)	NCBI	Ortholog
Sus scrofa (pig):	WNT5B (Wnt family member 5B)	HGNC	NCBI, Panther, Treefam
Chlorocebus sabaeus (green monkey):	WNT5B (Wnt family member 5B)	NCBI	Ortholog
Heterocephalus glaber (naked mole-rat):	Wnt5b (Wnt family member 5B)	NCBI	Ortholog
Other homologs ²
Mus musculus (house mouse):	Wnt5a (wingless-type MMTV integration site family, member 5A)	HGNC	OrthoDB, OrthoMCL
Rattus norvegicus (Norway rat):	Wnt5a (Wnt family member 5A)	HGNC	OrthoDB
Canis lupus familiaris (dog):	WNT5A (Wnt family member 5A)	HGNC	OrthoDB
Sus scrofa (pig):	WNT5A (Wnt family member 5A)	HGNC	OrthoDB
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Wnt5b (Wnt family member 5B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Wnt5b (wingless-type MMTV integration site family, member 5B)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	wnt5b (wingless-type MMTV integration site family, member 5b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|PANTHER\|ZFIN)
Caenorhabditis elegans (roundworm):	cwn-2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Wnt5	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus laevis (African clawed frog):	wnt5b.L	Alliance	DIOPT (Xenbase)
Xenopus tropicalis (tropical clawed frog):	wnt5b	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Xenopus laevis (African clawed frog):	wnt5b.S	Alliance	DIOPT (Xenbase)

Allele / Splice:

See ClinVar data

Latest Assembly:

GRCh38 - Human Genome Assembly GRCh38

Position:

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	1,617,056 - 1,647,212 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	1,529,891 - 1,647,212 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	1,726,222 - 1,756,378 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	1,596,483 - 1,626,639 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	1,608,672 - 1,626,638	NCBI
Celera	12	3,334,306 - 3,364,399 (+)	NCBI		Celera
Cytogenetic Map	12	p13.33	NCBI
HuRef	12	1,580,178 - 1,611,098 (+)	NCBI		HuRef
CHM1_1	12	1,725,640 - 1,755,783 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	1,612,578 - 1,643,573 (+)	NCBI		T2T-CHM13v2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

adenoid cystic carcinoma (EXP)

Experimental Mammary Neoplasms (ISO)

genetic disease (IAGP)

Hyperphosphatemic Familial Tumoral Calcinosis 1 (IAGP)

leiomyoma (EXP,IEP)

Salivary Gland Neoplasms (EXP)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1,3-dinitrobenzene (ISO)

17beta-estradiol (EXP)

2,2',5,5'-tetrachlorobiphenyl (EXP)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

3-isobutyl-1-methyl-7H-xanthine (EXP)

4,4'-sulfonyldiphenol (EXP,ISO)

6-propyl-2-thiouracil (ISO)

8-Br-cAMP (EXP)

9-cis-retinoic acid (EXP)

acetaldehyde (ISO)

all-trans-retinoic acid (EXP)

ammonium chloride (ISO)

amosite asbestos (EXP)

atrazine (ISO)

belinostat (EXP)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (EXP)

bisphenol A (EXP,ISO)

bisphenol F (EXP,ISO)

C60 fullerene (ISO)

carbon nanotube (ISO)

chlorpyrifos (ISO)

cisplatin (EXP)

clofibrate (ISO)

copper atom (ISO)

copper(0) (ISO)

crocidolite asbestos (EXP)

dexamethasone (EXP)

diuron (ISO)

dorsomorphin (EXP)

elemental selenium (EXP)

entinostat (EXP)

ethanol (ISO)

flusilazole (ISO)

fulvestrant (EXP)

indometacin (EXP)

lipopolysaccharide (EXP,ISO)

mercury dibromide (EXP)

methylmercury chloride (EXP)

nickel subsulfide (ISO)

O-methyleugenol (EXP)

p-chloromercuribenzoic acid (EXP)

panobinostat (EXP)

paracetamol (ISO)

phenobarbital (ISO)

phenylmercury acetate (EXP)

progesterone (EXP)

resveratrol (EXP,ISO)

S-(1,2-dichlorovinyl)-L-cysteine (EXP)

SB 431542 (EXP)

selenium atom (EXP)

serpentine asbestos (EXP)

silicon dioxide (EXP,ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (EXP)

thalidomide (EXP)

toluene (ISO)

trichloroethene (ISO)

trichostatin A (EXP)

triclosan (EXP)

valproic acid (EXP,ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

canonical Wnt signaling pathway (IBA)

cell fate commitment (IBA)

cellular response to retinoic acid (ISS)

chondrocyte differentiation (IEP)

fat cell differentiation (NAS)

lens fiber cell development (ISS)

muscle cell differentiation (ISS)

negative regulation of canonical Wnt signaling pathway (ISO)

neuron differentiation (IBA,ISS)

positive regulation of cell migration (IDA)

positive regulation of convergent extension involved in gastrulation (ISS)

positive regulation of fat cell differentiation (ISO)

positive regulation of non-canonical Wnt signaling pathway (ISS)

Wnt signaling pathway (IEA)

Cellular Component

cell surface (ISO)

collagen-containing extracellular matrix (HDA)

endocytic vesicle membrane (TAS)

endoplasmic reticulum lumen (TAS)

extracellular exosome (HDA,TAS)

extracellular matrix (ISO)

extracellular region (IEA,TAS)

extracellular space (IBA,NAS)

Golgi lumen (TAS)

plasma membrane (TAS)

Molecular Function

cytokine activity (IBA)

frizzled binding (IBA)

protein binding (ISO)

signaling receptor binding (IEA,IPI)

Molecular Pathway Annotations Click to see Annotation Detail View

basal cell carcinoma pathway (IEA)

Hedgehog signaling pathway (IEA)

Wnt signaling pathway (IEA,TAS)

Wnt signaling, canonical pathway (TAS)

References

References - curated

#	Reference Title	Reference Citation
1.	GOAs Human GO annotations	GOA_HUMAN data from the GO Consortium
2.	Overexpression of the Wnt5b gene in leiomyoma cells: implications for a role of the Wnt signaling pathway in the uterine benign tumor.	Mangioni S, etal., J Clin Endocrinol Metab. 2005 Sep;90(9):5349-55. Epub 2005 Jun 21.
3.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	The Wnt Homepage	Roel Nusse - Howard Hughes Medical Institute and the Department of Developmental Biology at Stanford University, California, USA
7.	Transformation by Wnt family proteins correlates with regulation of beta-catenin.	Shimizu H, etal., Cell Growth Differ. 1997 Dec;8(12):1349-58.
8.	Alternative wnt signaling is initiated by distinct receptors.	van Amerongen R, etal., Sci Signal. 2008 Sep 2;1(35):re9.
9.	Differential transformation of mammary epithelial cells by Wnt genes.	Wong GT, etal., Mol Cell Biol. 1994 Sep;14(9):6278-86.

Additional References at PubMed

PMID:8167409	PMID:10866835	PMID:11445850	PMID:12165812	PMID:12477932	PMID:15135146	PMID:15386214	PMID:15489334	PMID:15731909	PMID:16189514	PMID:16258938	PMID:18555673
PMID:19056867	PMID:19453261	PMID:19486338	PMID:19577541	PMID:19863181	PMID:21766608	PMID:21873635	PMID:21980498	PMID:23817222	PMID:24040439	PMID:24220306	PMID:24344732
PMID:24399733	PMID:24564888	PMID:24841200	PMID:24944491	PMID:25246426	PMID:25425204	PMID:26733379	PMID:26861993	PMID:27036869	PMID:27121420	PMID:27126693	PMID:27593938
PMID:27762090	PMID:27932350	PMID:28078366	PMID:28327460	PMID:28514442	PMID:29847788	PMID:31666682	PMID:32092330	PMID:32561739	PMID:33961781	PMID:34536574	PMID:34906330

Genomics

Comparative Map Data

WNT5B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	1,617,056 - 1,647,212 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	1,529,891 - 1,647,212 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	1,726,222 - 1,756,378 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	1,596,483 - 1,626,639 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	1,608,672 - 1,626,638	NCBI
Celera	12	3,334,306 - 3,364,399 (+)	NCBI		Celera
Cytogenetic Map	12	p13.33	NCBI
HuRef	12	1,580,178 - 1,611,098 (+)	NCBI		HuRef
CHM1_1	12	1,725,640 - 1,755,783 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	1,612,578 - 1,643,573 (+)	NCBI		T2T-CHM13v2.0

Wnt5b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	119,409,493 - 119,521,847 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	119,409,492 - 119,521,308 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	119,432,531 - 119,544,824 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	119,432,531 - 119,544,347 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	119,382,549 - 119,494,365 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	119,398,152 - 119,432,830 (-)	NCBI		MGSCv36	mm8
Celera	6	121,265,742 - 121,378,088 (-)	NCBI		Celera
Cytogenetic Map	6	F1	NCBI
cM Map	6	56.86	NCBI

Wnt5b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	152,609,566 - 152,733,790 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	152,609,569 - 152,733,407 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	158,871,858 - 158,887,919 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	154,655,571 - 154,671,633 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	153,278,919 - 153,294,983 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	151,500,962 - 151,516,894 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	151,500,957 - 151,516,894 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	217,413,755 - 217,429,687 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	155,747,648 - 155,763,554 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	155,993,769 - 156,005,122 (-)	NCBI
Celera	4	141,470,185 - 141,485,879 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

Wnt5b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955454	4,178,609 - 4,192,710 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955454	4,158,648 - 4,192,709 (+)	NCBI	ChiLan1.0	ChiLan1.0

WNT5B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	12	7,058,557 - 7,182,072 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	1,633,987 - 1,757,431 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	1,690,382 - 1,708,351 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	1,691,097 - 1,708,351 (+)	Ensembl	panpan1.1		panPan2

WNT5B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	43,662,482 - 43,679,713 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	43,620,284 - 43,677,078 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	3,005,866 - 3,114,488 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	43,937,616 - 44,046,407 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	43,990,960 - 44,044,187 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	43,868,749 - 43,977,500 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	43,841,172 - 43,950,683 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	2,363,801 - 2,472,605 (-)	NCBI		UU_Cfam_GSD_1.0

Wnt5b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	107,329,243 - 107,442,601 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936606	1,838,043 - 1,856,095 (+)	Ensembl	SpeTri2.0
SpeTri2.0	NW_004936606	1,741,500 - 1,854,857 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

WNT5B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	68,627,185 - 68,732,265 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	68,627,158 - 68,731,938 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	71,086,581 - 71,088,105 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

WNT5B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	1,571,569 - 1,689,750 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	1,674,245 - 1,690,299 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	6,638,682 - 6,758,591 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Wnt5b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624735	11,223,227 - 11,236,609 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624735	11,222,339 - 11,326,480 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in WNT5B
20 total Variants

Clinical Variants

Name	Type	Condition(s)	Position(s)	Clinical significance
GRCh38/hg38 12p13.33(chr12:832749-1632145)x3	copy number gain	See cases [RCV000050805]	Chr12:832749..1632145 [GRCh38] Chr12:941915..1741311 [GRCh37] Chr12:812176..1611572 [NCBI36] Chr12:12p13.33	uncertain significance
GRCh38/hg38 12p13.33-13.32(chr12:121255-3968447)x1	copy number loss	See cases [RCV000050637]	Chr12:121255..3968447 [GRCh38] Chr12:282465..4077613 [GRCh37] Chr12:100682..3947874 [NCBI36] Chr12:12p13.33-13.32	pathogenic
GRCh38/hg38 12p13.33(chr12:1453550-2575642)x3	copy number gain	See cases [RCV000051953]	Chr12:1453550..2575642 [GRCh38] Chr12:1562716..2684808 [GRCh37] Chr12:1432977..2555069 [NCBI36] Chr12:12p13.33	uncertain significance
GRCh38/hg38 12p13.33-11.22(chr12:121055-28415184)x1	copy number loss	See cases [RCV000052776]	Chr12:121055..28415184 [GRCh38] Chr12:282465..28568117 [GRCh37] Chr12:100482..28459384 [NCBI36] Chr12:12p13.33-11.22	pathogenic
GRCh38/hg38 12p13.33(chr12:99592-1786491)x1	copy number loss	See cases [RCV000052745]	Chr12:99592..1786491 [GRCh38] Chr12:282465..1895657 [GRCh37] Chr12:79019..1765918 [NCBI36] Chr12:12p13.33	pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:77187-34380176)x3	copy number gain	See cases [RCV000053660]	Chr12:77187..34380176 [GRCh38] Chr12:282465..34533111 [GRCh37] Chr12:56614..34424378 [NCBI36] Chr12:12p13.33-11.1	pathogenic
GRCh38/hg38 12p13.33-12.1(chr12:80412-25470329)x3	copy number gain	See cases [RCV000053662]	Chr12:80412..25470329 [GRCh38] Chr12:282465..25623263 [GRCh37] Chr12:59839..25514530 [NCBI36] Chr12:12p13.33-12.1	pathogenic
GRCh38/hg38 12p13.33-13.31(chr12:121055-7272606)x3	copy number gain	See cases [RCV000053663]	Chr12:121055..7272606 [GRCh38] Chr12:282465..7425202 [GRCh37] Chr12:100482..7316469 [NCBI36] Chr12:12p13.33-13.31	pathogenic
GRCh38/hg38 12p13.33-13.31(chr12:121255-8361746)x3	copy number gain	Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053664]\|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053664]\|See cases [RCV000053664]	Chr12:121255..8361746 [GRCh38] Chr12:282465..8514342 [GRCh37] Chr12:100682..8405609 [NCBI36] Chr12:12p13.33-13.31	pathogenic
GRCh38/hg38 12p13.33-13.32(chr12:199896-3284963)x3	copy number gain	See cases [RCV000053665]	Chr12:199896..3284963 [GRCh38] Chr12:309062..3394129 [GRCh37] Chr12:179323..3264390 [NCBI36] Chr12:12p13.33-13.32	pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:212976-33926913)x4	copy number gain	See cases [RCV000053666]	Chr12:212976..33926913 [GRCh38] Chr12:322142..34079848 [GRCh37] Chr12:192403..33971115 [NCBI36] Chr12:12p13.33-11.1	pathogenic
NM_030775.2(WNT5B):c.607G>A (p.Glu203Lys)	single nucleotide variant	Malignant melanoma [RCV000069916]	Chr12:1639962 [GRCh38] Chr12:1749128 [GRCh37] Chr12:1619389 [NCBI36] Chr12:12p13.33	not provided
GRCh38/hg38 12p13.33-13.31(chr12:45740-6945196)x3	copy number gain	See cases [RCV000135350]	Chr12:45740..6945196 [GRCh38] Chr12:147099..7054359 [GRCh37] Chr12:17360..6924620 [NCBI36] Chr12:12p13.33-13.31	pathogenic
GRCh38/hg38 12p13.33(chr12:54452-2558097)x1	copy number loss	See cases [RCV000136313]	Chr12:54452..2558097 [GRCh38] Chr12:282465..2667263 [GRCh37] Chr12:33879..2537524 [NCBI36] Chr12:12p13.33	pathogenic
GRCh38/hg38 12p13.33-13.31(chr12:199896-5807366)x1	copy number loss	See cases [RCV000136848]	Chr12:199896..5807366 [GRCh38] Chr12:309062..5916532 [GRCh37] Chr12:179323..5786793 [NCBI36] Chr12:12p13.33-13.31	pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:121255-34603274)x3	copy number gain	See cases [RCV000136611]	Chr12:121255..34603274 [GRCh38] Chr12:282465..34756209 [GRCh37] Chr12:100682..34647476 [NCBI36] Chr12:12p13.33-11.1	pathogenic
GRCh38/hg38 12p13.33(chr12:80412-2850599)x1	copy number loss	See cases [RCV000137693]	Chr12:80412..2850599 [GRCh38] Chr12:282465..2959765 [GRCh37] Chr12:59839..2830026 [NCBI36] Chr12:12p13.33	pathogenic\|uncertain significance
GRCh38/hg38 12p13.33-13.32(chr12:80412-4420585)x1	copy number loss	See cases [RCV000138558]	Chr12:80412..4420585 [GRCh38] Chr12:282465..4529751 [GRCh37] Chr12:59839..4400012 [NCBI36] Chr12:12p13.33-13.32	pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:121271-34603261)x3	copy number gain	See cases [RCV000139052]	Chr12:121271..34603261 [GRCh38] Chr12:282465..34756196 [GRCh37] Chr12:100698..34647463 [NCBI36] Chr12:12p13.33-11.1	pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:54427-34608071)x4	copy number gain	See cases [RCV000139787]	Chr12:54427..34608071 [GRCh38] Chr12:282465..34761006 [GRCh37] Chr12:33854..34652273 [NCBI36] Chr12:12p13.33-11.1	pathogenic
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3	copy number gain	See cases [RCV000139555]	Chr12:121271..133196807 [GRCh38] Chr12:282465..133773393 [GRCh37] Chr12:100698..132283466 [NCBI36] Chr12:12p13.33-q24.33	pathogenic
GRCh38/hg38 12p13.33-13.32(chr12:54427-4004912)x1	copy number loss	See cases [RCV000140991]	Chr12:54427..4004912 [GRCh38] Chr12:282465..4114078 [GRCh37] Chr12:33854..3984339 [NCBI36] Chr12:12p13.33-13.32	pathogenic
GRCh38/hg38 12p13.33-12.2(chr12:1258274-20657577)x3	copy number gain	See cases [RCV000141905]	Chr12:1258274..20657577 [GRCh38] Chr12:1367440..20810511 [GRCh37] Chr12:1237701..20701778 [NCBI36] Chr12:12p13.33-12.2	pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:64620-34682902)x4	copy number gain	See cases [RCV000142149]	Chr12:64620..34682902 [GRCh38] Chr12:173786..34835837 [GRCh37] Chr12:44047..34727104 [NCBI36] Chr12:12p13.33-11.1	pathogenic
GRCh38/hg38 12p13.33(chr12:121255-3003320)x1	copy number loss	See cases [RCV000142595]	Chr12:121255..3003320 [GRCh38] Chr12:282465..3112486 [GRCh37] Chr12:100682..2982747 [NCBI36] Chr12:12p13.33	pathogenic
GRCh38/hg38 12p13.33-13.31(chr12:418421-6235914)x3	copy number gain	See cases [RCV000143357]	Chr12:418421..6235914 [GRCh38] Chr12:527587..6345080 [GRCh37] Chr12:397848..6215341 [NCBI36] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:148034-34178799)x4	copy number gain	See cases [RCV000240164]	Chr12:148034..34178799 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3	copy number gain	See cases [RCV000258805]	Chr12:1..133851895 [GRCh37] Chr12:12p13.33-q24.33	pathogenic\|likely pathogenic
GRCh37/hg19 12p13.33(chr12:1555573-2655985)x3	copy number gain	See cases [RCV000240005]	Chr12:1555573..2655985 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33-13.32(chr12:222888-3931052)x1	copy number loss	See cases [RCV000239873]	Chr12:222888..3931052 [GRCh37] Chr12:12p13.33-13.32	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:89061-34178799)x3	copy number gain	See cases [RCV000240487]	Chr12:89061..34178799 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869301)x3	copy number gain	See cases [RCV000449191]	Chr12:173786..37869301 [GRCh37] Chr12:12p13.33-q11	pathogenic
GRCh37/hg19 12p13.33-12.1(chr12:173786-25286865)x3	copy number gain	See cases [RCV000449287]	Chr12:173786..25286865 [GRCh37] Chr12:12p13.33-12.1	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x3	copy number gain	See cases [RCV000447551]	Chr12:173786..34835837 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:173786-6378954)x1	copy number loss	See cases [RCV000447106]	Chr12:173786..6378954 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:173786-5737510)x1	copy number loss	See cases [RCV000446628]	Chr12:173786..5737510 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-12.2(chr12:173786-20026080)x3	copy number gain	See cases [RCV000446050]	Chr12:173786..20026080 [GRCh37] Chr12:12p13.33-12.2	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:173786-8257049)x3	copy number gain	See cases [RCV000446749]	Chr12:173786..8257049 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:189578-34756150)	copy number gain	See cases [RCV000446017]	Chr12:189578..34756150 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33(chr12:173786-2865649)x1	copy number loss	See cases [RCV000447876]	Chr12:173786..2865649 [GRCh37] Chr12:12p13.33	pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3	copy number gain	See cases [RCV000510482]	Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33(chr12:173786-2108237)x3	copy number gain	See cases [RCV000510561]	Chr12:173786..2108237 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33-11.1(chr12:565369-34835837)x3	copy number gain	See cases [RCV000511580]	Chr12:565369..34835837 [GRCh37] Chr12:12p13.33-11.1	likely pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)	copy number gain	See cases [RCV000511643]	Chr12:173787..133777902 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33-13.2(chr12:173786-11677456)x3	copy number gain	See cases [RCV000510853]	Chr12:173786..11677456 [GRCh37] Chr12:12p13.33-13.2	pathogenic
GRCh37/hg19 12p13.33-11.22(chr12:173786-28219229)x3	copy number gain	See cases [RCV000510961]	Chr12:173786..28219229 [GRCh37] Chr12:12p13.33-11.22	pathogenic
NM_032642.3(WNT5B):c.881C>T (p.Thr294Met)	single nucleotide variant	Inborn genetic diseases [RCV003270235]	Chr12:1646053 [GRCh38] Chr12:1755219 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33(chr12:173786-2793493)x1	copy number loss	not provided [RCV000683468]	Chr12:173786..2793493 [GRCh37] Chr12:12p13.33	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x2,3	copy number gain	not provided [RCV000683478]	Chr12:173786..34835837 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33-13.32(chr12:173786-4105910)x1	copy number loss	not provided [RCV000683471]	Chr12:173786..4105910 [GRCh37] Chr12:12p13.33-13.32	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x3	copy number gain	not provided [RCV000683479]	Chr12:173786..34835837 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869107)x3	copy number gain	not provided [RCV000683480]	Chr12:173786..37869107 [GRCh37] Chr12:12p13.33-q11	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:191242-8122785)x3	copy number gain	not provided [RCV000683477]	Chr12:191242..8122785 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:173786-6201932)x1	copy number loss	not provided [RCV000683476]	Chr12:173786..6201932 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:173786-6039841)x1	copy number loss	not provided [RCV000683475]	Chr12:173786..6039841 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:173786-5952112)x1	copy number loss	not provided [RCV000683474]	Chr12:173786..5952112 [GRCh37] Chr12:12p13.33-13.31	pathogenic
NC_000012.12:g.(1_3750000)_(5250000_9000000)del	deletion	Tumoral calcinosis, hyperphosphatemic, familial, 1 [RCV000758697]	Chr12:3750000..5250000 [GRCh38] Chr12:12p13.33-13.31	pathogenic\|not provided
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3	copy number gain	not provided [RCV000750246]	Chr12:191619..133777645 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3	copy number gain	not provided [RCV000750253]	Chr12:621220..133779118 [GRCh37] Chr12:12p13.33-q24.33	pathogenic
GRCh37/hg19 12p13.33-11.21(chr12:191619-31733044)x3	copy number gain	not provided [RCV000750245]	Chr12:191619..31733044 [GRCh37] Chr12:12p13.33-11.21	pathogenic
GRCh37/hg19 12p13.33-12.3(chr12:189216-15001420)	copy number gain	not provided [RCV000767817]	Chr12:189216..15001420 [GRCh37] Chr12:12p13.33-12.3	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:189216-8185497)	copy number gain	not provided [RCV000767819]	Chr12:189216..8185497 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:237588-8278292)	copy number gain	not provided [RCV000767818]	Chr12:237588..8278292 [GRCh37] Chr12:12p13.33-13.31	pathogenic
NM_032642.3(WNT5B):c.663C>T (p.Gly221=)	single nucleotide variant	not provided [RCV000916151]	Chr12:1645835 [GRCh38] Chr12:1755001 [GRCh37] Chr12:12p13.33	likely benign
GRCh37/hg19 12p13.33-13.31(chr12:173786-6346092)x1	copy number loss	not provided [RCV000847821]	Chr12:173786..6346092 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33(chr12:1436977-2156672)x3	copy number gain	not provided [RCV000849160]	Chr12:1436977..2156672 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33-13.31(chr12:173786-8393815)x3	copy number gain	not provided [RCV000846343]	Chr12:173786..8393815 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34496628)x3	copy number gain	not provided [RCV000847209]	Chr12:173786..34496628 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33(chr12:1550562-1861557)x1	copy number loss	not provided [RCV000850007]	Chr12:1550562..1861557 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33-q11(chr12:274676-37869301)x4	copy number gain	not provided [RCV001006470]	Chr12:274676..37869301 [GRCh37] Chr12:12p13.33-q11	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:189145-7730395)x3	copy number gain	not provided [RCV001537906]	Chr12:189145..7730395 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33-13.32(chr12:191242-4683495)x1	copy number loss	not provided [RCV001259134]	Chr12:191242..4683495 [GRCh37] Chr12:12p13.33-13.32	pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:146240-8330229)x3	copy number gain	Obesity [RCV001801197]	Chr12:146240..8330229 [GRCh37] Chr12:12p13.33-13.31	pathogenic
NM_032642.3(WNT5B):c.391C>G (p.Arg131Gly)	single nucleotide variant	Inborn genetic diseases [RCV003198031]	Chr12:1639746 [GRCh38] Chr12:1748912 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33-12.1(chr12:173786-25286865)	copy number gain	not specified [RCV002052955]	Chr12:173786..25286865 [GRCh37] Chr12:12p13.33-12.1	pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)	copy number gain	not specified [RCV002052957]	Chr12:173786..34835837 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869301)	copy number gain	not specified [RCV002052958]	Chr12:173786..37869301 [GRCh37] Chr12:12p13.33-q11	pathogenic
NC_000012.11:g.(?_862732)_(2800365_?)dup	duplication	not provided [RCV003113825]	Chr12:862732..2800365 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33-13.31(chr12:173787-8320544)x3	copy number gain	not provided [RCV002472514]	Chr12:173787..8320544 [GRCh37] Chr12:12p13.33-13.31	pathogenic
GRCh37/hg19 12p13.33(chr12:817514-2205439)x1	copy number loss	not provided [RCV002475589]	Chr12:817514..2205439 [GRCh37] Chr12:12p13.33	pathogenic
NM_032642.3(WNT5B):c.127G>A (p.Gly43Ser)	single nucleotide variant	Inborn genetic diseases [RCV002992034]	Chr12:1632704 [GRCh38] Chr12:1741870 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.716G>A (p.Arg239His)	single nucleotide variant	Inborn genetic diseases [RCV002784287]	Chr12:1645888 [GRCh38] Chr12:1755054 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.478G>T (p.Gly160Cys)	single nucleotide variant	Inborn genetic diseases [RCV002868139]	Chr12:1639833 [GRCh38] Chr12:1748999 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.400C>A (p.Arg134Ser)	single nucleotide variant	Inborn genetic diseases [RCV002987176]	Chr12:1639755 [GRCh38] Chr12:1748921 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.856G>A (p.Asp286Asn)	single nucleotide variant	Inborn genetic diseases [RCV002957067]	Chr12:1646028 [GRCh38] Chr12:1755194 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.143G>A (p.Cys48Tyr)	single nucleotide variant	Inborn genetic diseases [RCV002854210]	Chr12:1632720 [GRCh38] Chr12:1741886 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.557C>A (p.Ala186Asp)	single nucleotide variant	Inborn genetic diseases [RCV002986482]	Chr12:1639912 [GRCh38] Chr12:1749078 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.599A>G (p.Gln200Arg)	single nucleotide variant	Inborn genetic diseases [RCV002892120]	Chr12:1639954 [GRCh38] Chr12:1749120 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.1051G>A (p.Glu351Lys)	single nucleotide variant	Inborn genetic diseases [RCV002916466]	Chr12:1646223 [GRCh38] Chr12:1755389 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.878G>A (p.Ser293Asn)	single nucleotide variant	Inborn genetic diseases [RCV002873985]	Chr12:1646050 [GRCh38] Chr12:1755216 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.706G>T (p.Ala236Ser)	single nucleotide variant	Inborn genetic diseases [RCV002767330]	Chr12:1645878 [GRCh38] Chr12:1755044 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.28G>A (p.Ala10Thr)	single nucleotide variant	Inborn genetic diseases [RCV002964111]	Chr12:1631382 [GRCh38] Chr12:1740548 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.262C>T (p.Arg88Trp)	single nucleotide variant	Inborn genetic diseases [RCV003189653]	Chr12:1632839 [GRCh38] Chr12:1742005 [GRCh37] Chr12:12p13.33	uncertain significance
NM_032642.3(WNT5B):c.802A>G (p.Ser268Gly)	single nucleotide variant	Inborn genetic diseases [RCV003210313]	Chr12:1645974 [GRCh38] Chr12:1755140 [GRCh37] Chr12:12p13.33	uncertain significance
GRCh37/hg19 12p13.33-11.1(chr12:176047-34179852)x4	copy number gain	Pallister-Killian syndrome [RCV003154827]	Chr12:176047..34179852 [GRCh37] Chr12:12p13.33-11.1	pathogenic
GRCh38/hg38 12p13.33-13.32(chr12:54427-3639603)x1	copy number loss	See cases [RCV000141250]	Chr12:54427..3639603 [GRCh38] Chr12:282465..3748769 [GRCh37] Chr12:33854..3619030 [NCBI36] Chr12:12p13.33-13.32	pathogenic

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	3422
Count of miRNA genes:	997
Interacting mature miRNAs:	1239
Transcripts:	ENST00000310594, ENST00000397196, ENST00000537031, ENST00000538854, ENST00000539198, ENST00000542408, ENST00000543071, ENST00000543563, ENST00000545747, ENST00000545811
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region

D12S2103

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	12	1,729,105 - 1,729,303	UniSTS	GRCh37
Build 36	12	1,599,366 - 1,599,564	RGD	NCBI36
Celera	12	3,337,191 - 3,337,389	RGD
Cytogenetic Map	12	p13.3	UniSTS
HuRef	12	1,583,063 - 1,583,261	UniSTS

WNT5B_3683

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	12	1,755,680 - 1,756,507	UniSTS	GRCh37
Build 36	12	1,625,941 - 1,626,768	RGD	NCBI36
Celera	12	3,363,701 - 3,364,528	RGD
HuRef	12	1,610,400 - 1,611,227	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system

circulatory system

endocrine system

exocrine system

hemolymphoid system

hepatobiliary system

integumental system

musculoskeletal system

nervous system

renal system

reproductive system

respiratory system

sensory system

visual system

adipose tissue

appendage

entire extraembryonic component

High

Medium

1174

158

105

298

305

791

463

442

274

Low

1197

2339

1390

429

979

361

3468

791

3131

284

966

1458

1186

1975

Below cutoff

619

168

619

571

611

116

539

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_030775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_032642	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024449203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024449204	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024449205	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024449206	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024449207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024449208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_024449209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB060966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AB209228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC004671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC005182	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK290430	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK294096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY009399	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC001749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471116	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CP068266	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CQ970118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENST00000310594 ⟹ ENSP00000308887

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,617,056 - 1,647,211 (+)	Ensembl

RefSeq Acc Id:

ENST00000397196 ⟹ ENSP00000380379

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,629,231 - 1,647,212 (+)	Ensembl

RefSeq Acc Id:

ENST00000537031 ⟹ ENSP00000439312

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,574,657 - 1,646,367 (+)	Ensembl

RefSeq Acc Id:

ENST00000538854

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,616,660 - 1,631,323 (+)	Ensembl

RefSeq Acc Id:

ENST00000539198 ⟹ ENSP00000438414

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,529,891 - 1,639,709 (+)	Ensembl

RefSeq Acc Id:

ENST00000542408 ⟹ ENSP00000440600

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,631,315 - 1,645,933 (+)	Ensembl

RefSeq Acc Id:

ENST00000543071 ⟹ ENSP00000442348

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,630,812 - 1,645,933 (+)	Ensembl

RefSeq Acc Id:

ENST00000543563

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,629,897 - 1,632,906 (+)	Ensembl

RefSeq Acc Id:

ENST00000545747

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,644,797 - 1,646,533 (+)	Ensembl

RefSeq Acc Id:

ENST00000545811 ⟹ ENSP00000445395

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38.p14 Ensembl	12	1,530,819 - 1,639,827 (+)	Ensembl

RefSeq Acc Id:

NM_030775 ⟹ NP_110402

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	12	1,617,056 - 1,647,211 (+)	NCBI
GRCh37	12	1,683,823 - 1,756,379 (+)	NCBI
Build 36	12	1,596,483 - 1,626,638 (+)	NCBI Archive
HuRef	12	1,580,178 - 1,611,098 (+)	ENTREZGENE
CHM1_1	12	1,725,640 - 1,755,782 (+)	NCBI
T2T-CHM13v2.0	12	1,612,578 - 1,643,572 (+)	NCBI

Sequence:

show sequence

TATTCTTCCAAATGGAAACTGCTAATTTTTGAAGCAGAAGGTTGACAGCTTCAGTAAGATCTCA
AGAGAGCGAGAAGACTGGAATCAGGGAACCCTACTCTGGAAACTGTCAGTCCCAGGGCACTGGG
GAGGGCTGAGGCCGACCATGCCCAGCCTGCTGCTGCTGTTCACGGCTGCTCTGCTGTCCAGCTG
GGCTCAGCTTCTGACAGACGCCAACTCCTGGTGGTCATTAGCTTTGAACCCGGTGCAGAGACCC
GAGATGTTTATCATCGGTGCCCAGCCCGTGTGCAGTCAGCTTCCCGGGCTCTCCCCTGGCCAGA
GGAAGCTGTGCCAATTGTACCAGGAGCACATGGCCTACATAGGGGAGGGAGCCAAGACTGGCAT
CAAGGAATGCCAGCACCAGTTCCGGCAGCGGCGGTGGAATTGCAGCACAGCGGACAACGCATCT
GTCTTTGGGAGAGTCATGCAGATAGGCAGCCGAGAGACCGCCTTCACCCACGCGGTGAGCGCCG
CGGGCGTGGTCAACGCCATCAGCCGGGCCTGCCGCGAGGGCGAGCTCTCCACCTGCGGCTGCAG
CCGGACGGCGCGGCCCAAGGACCTGCCCCGGGACTGGCTGTGGGGCGGCTGTGGGGACAACGTG
GAGTACGGCTACCGCTTCGCCAAGGAGTTTGTGGATGCCCGGGAGCGAGAGAAGAACTTTGCCA
AAGGATCAGAGGAGCAGGGCCGGGTGCTCATGAACCTGCAAAACAACGAGGCCGGTCGCAGGGC
TGTGTATAAGATGGCAGACGTAGCCTGCAAATGCCACGGCGTCTCGGGGTCCTGCAGCCTCAAG
ACCTGCTGGCTGCAGCTGGCCGAGTTCCGCAAGGTCGGGGACCGGCTGAAGGAGAAGTACGACA
GCGCGGCCGCCATGCGCGTCACCCGCAAGGGCCGGCTGGAGCTGGTCAACAGCCGCTTCACCCA
GCCCACCCCGGAGGACCTGGTCTATGTGGACCCCAGCCCCGACTACTGCCTGCGCAACGAGAGC
ACGGGCTCCCTGGGCACGCAGGGCCGCCTCTGCAACAAGACCTCGGAGGGCATGGATGGCTGTG
AGCTCATGTGCTGCGGGCGTGGCTACAACCAGTTCAAGAGCGTGCAGGTGGAGCGCTGCCACTG
CAAGTTCCACTGGTGCTGCTTCGTCAGGTGTAAGAAGTGCACGGAGATCGTGGACCAGTACATC
TGTAAATAGCCCGGAGGGCCTGCTCCCGGCCCCCCTGCACTCTGCCTCACAAAGGTCTATATTA
TATAAATCTATATAAATCTATTTTATATTTGTATAAGTAAATGGGTGGGTGCTATACAATGGAA
AGATGAAAATGGAAAGGAAGAGCTTATTTAAGAGACGCTGGAGATCTCTGAGGAGTGGACTTTG
CTGGTTCTCTCCTCTTGGTGGGTGGGAGACAGGGCTTTTTCTCTCCCTCTGGCGAGGACTCTCA
GGATGTAGGGACTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTTGTGGT
TGGATGGAGGAGATGATCTTGTCTGGAAGTCTAGAGTCTTTGTTGGTTAGAGGACTGCCTGTGA
TCCTGGCCACTAGGCCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCT
TCAGGGTCTTGTCCAGAATGTAGATGGGTTCCGTAAGAGGCCTGGTGCTCTCTTACTCTTTCAT
CCACGTGCACTTGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGAAGTCC
AAGGTCATCTCTGGCCCAGTGACCACAGAGAGATCTGCACCTCCCGGACTTCAGGCCTGCCTTT
CCAGCGAGAATTCTTCATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATT
TGACCTGACATGTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCCAGGGTG
CATGACCAGGCTGCGTGGACGTTATACTGTCTTCCCCCACCCCCGGGGAGGGGAAGCTTGAGCT
GCTGCTGTCACTCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCT
GGCGGGCCCGGCGTGCTCATCATCTCTGCCCCAGGTGTACGGTTTCTCTCTGACATTAAATGCC
CTTCATGG

hide sequence

RefSeq Acc Id:

NM_032642 ⟹ NP_116031

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	12	1,629,231 - 1,647,212 (+)	NCBI
GRCh37	12	1,683,823 - 1,756,379 (+)	NCBI
Build 36	12	1,608,673 - 1,626,639 (+)	NCBI Archive
HuRef	12	1,580,178 - 1,611,098 (+)	ENTREZGENE
CHM1_1	12	1,737,838 - 1,755,783 (+)	NCBI
T2T-CHM13v2.0	12	1,625,605 - 1,643,573 (+)	NCBI

Sequence:

show sequence

AGTCACAGCCACAGTGACCATTAGCAGGCACCCAGGCCTGTCTTTGGCTCGGAAACGGTGGCCC
CCAATGTAGCCTAGTTTGAACCTAGGAACTGCAGGACCAGAGAGATTCCACTGGAGCCTGATGG
ACGGGTGACAGAGGGAACCCTACTCTGGAAACTGTCAGTCCCAGGGCACTGGGGAGGGCTGAGG
CCGACCATGCCCAGCCTGCTGCTGCTGTTCACGGCTGCTCTGCTGTCCAGCTGGGCTCAGCTTC
TGACAGACGCCAACTCCTGGTGGTCATTAGCTTTGAACCCGGTGCAGAGACCCGAGATGTTTAT
CATCGGTGCCCAGCCCGTGTGCAGTCAGCTTCCCGGGCTCTCCCCTGGCCAGAGGAAGCTGTGC
CAATTGTACCAGGAGCACATGGCCTACATAGGGGAGGGAGCCAAGACTGGCATCAAGGAATGCC
AGCACCAGTTCCGGCAGCGGCGGTGGAATTGCAGCACAGCGGACAACGCATCTGTCTTTGGGAG
AGTCATGCAGATAGGCAGCCGAGAGACCGCCTTCACCCACGCGGTGAGCGCCGCGGGCGTGGTC
AACGCCATCAGCCGGGCCTGCCGCGAGGGCGAGCTCTCCACCTGCGGCTGCAGCCGGACGGCGC
GGCCCAAGGACCTGCCCCGGGACTGGCTGTGGGGCGGCTGTGGGGACAACGTGGAGTACGGCTA
CCGCTTCGCCAAGGAGTTTGTGGATGCCCGGGAGCGAGAGAAGAACTTTGCCAAAGGATCAGAG
GAGCAGGGCCGGGTGCTCATGAACCTGCAAAACAACGAGGCCGGTCGCAGGGCTGTGTATAAGA
TGGCAGACGTAGCCTGCAAATGCCACGGCGTCTCGGGGTCCTGCAGCCTCAAGACCTGCTGGCT
GCAGCTGGCCGAGTTCCGCAAGGTCGGGGACCGGCTGAAGGAGAAGTACGACAGCGCGGCCGCC
ATGCGCGTCACCCGCAAGGGCCGGCTGGAGCTGGTCAACAGCCGCTTCACCCAGCCCACCCCGG
AGGACCTGGTCTATGTGGACCCCAGCCCCGACTACTGCCTGCGCAACGAGAGCACGGGCTCCCT
GGGCACGCAGGGCCGCCTCTGCAACAAGACCTCGGAGGGCATGGATGGCTGTGAGCTCATGTGC
TGCGGGCGTGGCTACAACCAGTTCAAGAGCGTGCAGGTGGAGCGCTGCCACTGCAAGTTCCACT
GGTGCTGCTTCGTCAGGTGTAAGAAGTGCACGGAGATCGTGGACCAGTACATCTGTAAATAGCC
CGGAGGGCCTGCTCCCGGCCCCCCTGCACTCTGCCTCACAAAGGTCTATATTATATAAATCTAT
ATAAATCTATTTTATATTTGTATAAGTAAATGGGTGGGTGCTATACAATGGAAAGATGAAAATG
GAAAGGAAGAGCTTATTTAAGAGACGCTGGAGATCTCTGAGGAGTGGACTTTGCTGGTTCTCTC
CTCTTGGTGGGTGGGAGACAGGGCTTTTTCTCTCCCTCTGGCGAGGACTCTCAGGATGTAGGGA
CTTGGAAATATTTACTGTCTGTCCACCACGGCCTGGAGGAGGGAGGTTGTGGTTGGATGGAGGA
GATGATCTTGTCTGGAAGTCTAGAGTCTTTGTTGGTTAGAGGACTGCCTGTGATCCTGGCCACT
AGGCCAAGAGGCCCTATGAAGGTGGCGGGAACTCAGCTTCAACCTCGATGTCTTCAGGGTCTTG
TCCAGAATGTAGATGGGTTCCGTAAGAGGCCTGGTGCTCTCTTACTCTTTCATCCACGTGCACT
TGTGCGGCATCTGCAGTTTACAGGAACGGCTCCTTCCCTAAAATGAGAAGTCCAAGGTCATCTC
TGGCCCAGTGACCACAGAGAGATCTGCACCTCCCGGACTTCAGGCCTGCCTTTCCAGCGAGAAT
TCTTCATCCTCCACGGTTCACTAGCTCCTACCTGAAGAGGAAAGGGGGCCATTTGACCTGACAT
GTCAGGAAAGCCCTAAACTGAATGTTTGCGCCTGGGCTGCAGAAGCCAGGGTGCATGACCAGGC
TGCGTGGACGTTATACTGTCTTCCCCCACCCCCGGGGAGGGGAAGCTTGAGCTGCTGCTGTCAC
TCCTCCACCGAGGGAGGCCTCACAAACCACAGGACGCTGCAACGGGTCAGGCTGGCGGGCCCGG
CGTGCTCATCATCTCTGCCCCAGGTGTACGGTTTCTCTCTGACATTAAATGCCCTTCATGGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_110402	(Get FASTA)	NCBI Sequence Viewer
	NP_116031	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAG38659	(Get FASTA)	NCBI Sequence Viewer
	AAH01749	(Get FASTA)	NCBI Sequence Viewer
	BAB62039	(Get FASTA)	NCBI Sequence Viewer
	BAD92465	(Get FASTA)	NCBI Sequence Viewer
	BAF83119	(Get FASTA)	NCBI Sequence Viewer
	BAH11671	(Get FASTA)	NCBI Sequence Viewer
	CAI38646	(Get FASTA)	NCBI Sequence Viewer
	EAW88925	(Get FASTA)	NCBI Sequence Viewer
	EAW88926	(Get FASTA)	NCBI Sequence Viewer
	EAW88927	(Get FASTA)	NCBI Sequence Viewer
	Q9H1J7	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_110402 ⟸ NM_030775
- Peptide Label:	precursor
- UniProtKB:	Q96S49 (UniProtKB/Swiss-Prot), D3DUP9 (UniProtKB/Swiss-Prot), A8K315 (UniProtKB/Swiss-Prot), Q9BV04 (UniProtKB/Swiss-Prot), Q9H1J7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MPSLLLLFTAALLSSWAQLLTDANSWWSLALNPVQRPEMFIIGAQPVCSQLPGLSPGQRKLCQL YQEHMAYIGEGAKTGIKECQHQFRQRRWNCSTADNASVFGRVMQIGSRETAFTHAVSAAGVVNA ISRACREGELSTCGCSRTARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDAREREKNFAKGSEEQ GRVLMNLQNNEAGRRAVYKMADVACKCHGVSGSCSLKTCWLQLAEFRKVGDRLKEKYDSAAAMR VTRKGRLELVNSRFTQPTPEDLVYVDPSPDYCLRNESTGSLGTQGRLCNKTSEGMDGCELMCCG RGYNQFKSVQVERCHCKFHWCCFVRCKKCTEIVDQYICK hide sequence

RefSeq Acc Id:	NP_116031 ⟸ NM_032642
- Peptide Label:	precursor
- UniProtKB:	Q96S49 (UniProtKB/Swiss-Prot), D3DUP9 (UniProtKB/Swiss-Prot), A8K315 (UniProtKB/Swiss-Prot), Q9BV04 (UniProtKB/Swiss-Prot), Q9H1J7 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MPSLLLLFTAALLSSWAQLLTDANSWWSLALNPVQRPEMFIIGAQPVCSQLPGLSPGQRKLCQL YQEHMAYIGEGAKTGIKECQHQFRQRRWNCSTADNASVFGRVMQIGSRETAFTHAVSAAGVVNA ISRACREGELSTCGCSRTARPKDLPRDWLWGGCGDNVEYGYRFAKEFVDAREREKNFAKGSEEQ GRVLMNLQNNEAGRRAVYKMADVACKCHGVSGSCSLKTCWLQLAEFRKVGDRLKEKYDSAAAMR VTRKGRLELVNSRFTQPTPEDLVYVDPSPDYCLRNESTGSLGTQGRLCNKTSEGMDGCELMCCG RGYNQFKSVQVERCHCKFHWCCFVRCKKCTEIVDQYICK hide sequence

RefSeq Acc Id:

ENSP00000440600 ⟸ ENST00000542408

RefSeq Acc Id:

ENSP00000442348 ⟸ ENST00000543071

RefSeq Acc Id:

ENSP00000445395 ⟸ ENST00000545811

RefSeq Acc Id:

ENSP00000308887 ⟸ ENST00000310594

RefSeq Acc Id:

ENSP00000439312 ⟸ ENST00000537031

RefSeq Acc Id:

ENSP00000438414 ⟸ ENST00000539198

RefSeq Acc Id:

ENSP00000380379 ⟸ ENST00000397196

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q9H1J7-F1-model_v2	AlphaFold	Q9H1J7	1-359	view protein structure

Promoters

RGD ID:

7222743

Promoter ID:

EPDNEW_H17117

Type:

initiation region

Name:

WNT5B_2

Description:

Wnt family member 5B

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_H17115

Experiment Methods:

Single-end sequencing.

Position:

Human Assembly	Chr	Position (strand)	Source
GRCh38	12	1,629,231 - 1,629,291	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	HGNC:16265	AgrOrtholog
COSMIC	WNT5B	COSMIC
Ensembl Genes	ENSG00000111186	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSP00000308887	ENTREZGENE
	ENSP00000308887.3	UniProtKB/Swiss-Prot
	ENSP00000380379	ENTREZGENE
	ENSP00000380379.2	UniProtKB/Swiss-Prot
	ENSP00000438414.1	UniProtKB/TrEMBL
	ENSP00000439312.1	UniProtKB/Swiss-Prot
	ENSP00000440600.1	UniProtKB/TrEMBL
	ENSP00000442348.1	UniProtKB/TrEMBL
	ENSP00000445395.1	UniProtKB/TrEMBL
Ensembl Transcript	ENST00000310594	ENTREZGENE
	ENST00000310594.7	UniProtKB/Swiss-Prot
	ENST00000397196	ENTREZGENE
	ENST00000397196.7	UniProtKB/Swiss-Prot
	ENST00000537031.5	UniProtKB/Swiss-Prot
	ENST00000539198.5	UniProtKB/TrEMBL
	ENST00000542408.1	UniProtKB/TrEMBL
	ENST00000543071.5	UniProtKB/TrEMBL
	ENST00000545811.5	UniProtKB/TrEMBL
Gene3D-CATH	3.30.2460.20	UniProtKB/Swiss-Prot
GTEx	ENSG00000111186	GTEx
HGNC ID	HGNC:16265	ENTREZGENE
Human Proteome Map	WNT5B	Human Proteome Map
InterPro	Wnt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Wnt_C	UniProtKB/Swiss-Prot
	Wnt_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	hsa:81029	UniProtKB/Swiss-Prot
NCBI Gene	81029	ENTREZGENE
OMIM	606361	OMIM
PANTHER	PTHR12027	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PTHR12027:SF87	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	wnt	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB	PA38104	PharmGKB
PRINTS	WNTPROTEIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	WNT1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	WNT1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A8K315	ENTREZGENE
	D3DUP9	ENTREZGENE
	F5GYM2_HUMAN	UniProtKB/TrEMBL
	F5H034_HUMAN	UniProtKB/TrEMBL
	F5H364_HUMAN	UniProtKB/TrEMBL
	F5H7Q6_HUMAN	UniProtKB/TrEMBL
	Q96S49	ENTREZGENE
	Q9BV04	ENTREZGENE
	Q9H1J7	ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary	A8K315	UniProtKB/Swiss-Prot
	D3DUP9	UniProtKB/Swiss-Prot
	Q96S49	UniProtKB/Swiss-Prot
	Q9BV04	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-03-28	WNT5B	Wnt family member 5B	WNT5B	wingless-type MMTV integration site family member 5B	Symbol and/or name change	5135510	APPROVED
2015-11-24	WNT5B	wingless-type MMTV integration site family member 5B	WNT5B	wingless-type MMTV integration site family, member 5B	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - KEGG (archival)