LMO3 (LIM domain only 3) - Rat Genome Database

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Gene: LMO3 (LIM domain only 3) Homo sapiens
Analyze
Symbol: LMO3
Name: LIM domain only 3
RGD ID: 1346701
HGNC Page HGNC:6643
Description: Predicted to enable DNA-binding transcription factor binding activity and transcription coactivator activity. Involved in positive regulation of fat cell differentiation and regulation of intracellular signal transduction. Located in cytoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: DAT1; dopamine associated transcription factor-1; LIM domain only 3 (rhombotin-like 2); LIM domain only protein 3; LMO-3; MGC26081; neuronal specific transcription factor DAT1; neuronal-specific transcription factor DAT1; RBTN3; RBTNL2; Rhom-3; RHOM3; rhombotin-3; rhombotin-like 2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381216,548,372 - 16,610,174 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1216,548,372 - 16,610,594 (-)EnsemblGRCh38hg38GRCh38
GRCh371216,701,306 - 16,761,148 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361216,592,574 - 16,652,291 (-)NCBINCBI36Build 36hg18NCBI36
Build 341216,592,573 - 16,650,698NCBI
Celera1221,845,084 - 21,904,807 (-)NCBICelera
Cytogenetic Map12p12.3NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBIHuRef
CHM1_11216,666,323 - 16,726,164 (-)NCBICHM1_1
T2T-CHM13v2.01216,425,771 - 16,487,621 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IDA)
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1507224   PMID:11489251   PMID:12477932   PMID:14702039   PMID:15489334   PMID:15930276   PMID:16189514   PMID:16344560   PMID:16713569   PMID:18330356   PMID:19995558   PMID:20211142  
PMID:21573214   PMID:21873635   PMID:22011669   PMID:23322301   PMID:23823477   PMID:24379077   PMID:25416956   PMID:25829251   PMID:27107012   PMID:27184832   PMID:28094252   PMID:28669928  
PMID:29436606   PMID:30219064   PMID:31488873   PMID:31515488   PMID:31646571   PMID:32296183   PMID:32513696   PMID:32814053   PMID:33961781   PMID:34018016   PMID:35165791   PMID:35914814  
PMID:36413852   PMID:36426731   PMID:36470425   PMID:38366633  


Genomics

Comparative Map Data
LMO3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381216,548,372 - 16,610,174 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1216,548,372 - 16,610,594 (-)EnsemblGRCh38hg38GRCh38
GRCh371216,701,306 - 16,761,148 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361216,592,574 - 16,652,291 (-)NCBINCBI36Build 36hg18NCBI36
Build 341216,592,573 - 16,650,698NCBI
Celera1221,845,084 - 21,904,807 (-)NCBICelera
Cytogenetic Map12p12.3NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBIHuRef
CHM1_11216,666,323 - 16,726,164 (-)NCBICHM1_1
T2T-CHM13v2.01216,425,771 - 16,487,621 (-)NCBIT2T-CHM13v2.0
Lmo3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396138,339,916 - 138,559,204 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6138,339,916 - 138,558,966 (-)EnsemblGRCm39 Ensembl
GRCm386138,362,918 - 138,582,206 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6138,362,918 - 138,581,968 (-)EnsemblGRCm38mm10GRCm38
MGSCv376138,313,002 - 138,530,489 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366138,328,677 - 138,546,164 (-)NCBIMGSCv36mm8
Celera6141,430,681 - 141,644,348 (-)NCBICelera
Cytogenetic Map6G1NCBI
cM Map669.02NCBI
Lmo3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84172,965,944 - 173,028,980 (-)NCBIGRCr8
mRatBN7.24171,234,686 - 171,297,677 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4171,234,696 - 171,292,222 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4177,529,732 - 177,588,943 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04173,313,901 - 173,373,109 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04171,934,427 - 171,993,645 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04172,942,023 - 173,005,630 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4172,942,020 - 173,005,634 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04237,193,254 - 237,256,248 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44175,454,813 - 175,514,615 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4159,806,475 - 159,863,495 (-)NCBICelera
Cytogenetic Map4q44NCBI
Lmo3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541313,181,048 - 13,246,246 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541313,183,294 - 13,238,875 (-)NCBIChiLan1.0ChiLan1.0
LMO3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21021,990,278 - 22,051,148 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11221,987,039 - 22,048,472 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01216,544,474 - 16,605,925 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11216,940,325 - 17,001,622 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1216,902,025 - 16,997,809 (-)Ensemblpanpan1.1panPan2
LMO3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12730,150,311 - 30,208,286 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2730,152,053 - 30,206,924 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2716,239,149 - 16,295,078 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02730,478,768 - 30,534,669 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2730,478,462 - 30,533,199 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12730,329,210 - 30,385,083 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02730,318,468 - 30,374,400 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02715,960,154 - 16,016,308 (-)NCBIUU_Cfam_GSD_1.0
Lmo3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494591,303,815 - 91,359,977 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365871,035,680 - 1,089,804 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365871,035,007 - 1,089,798 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LMO3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1556,056,885 - 56,118,813 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2559,453,257 - 59,512,969 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LMO3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11116,454,240 - 16,516,403 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606918,776,821 - 18,839,162 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Lmo3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475221,484,949 - 21,543,169 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475221,482,234 - 21,542,602 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in LMO3
12 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12p13.33-11.22(chr12:121055-28415184)x1 copy number loss See cases [RCV000052776] Chr12:121055..28415184 [GRCh38]
Chr12:282465..28568117 [GRCh37]
Chr12:100482..28459384 [NCBI36]
Chr12:12p13.33-11.22
pathogenic
GRCh38/hg38 12p12.3(chr12:16019165-17579501)x1 copy number loss See cases [RCV000052781] Chr12:16019165..17579501 [GRCh38]
Chr12:16172099..17732435 [GRCh37]
Chr12:16063366..17623702 [NCBI36]
Chr12:12p12.3
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:77187-34380176)x3 copy number gain See cases [RCV000053660] Chr12:77187..34380176 [GRCh38]
Chr12:282465..34533111 [GRCh37]
Chr12:56614..34424378 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-12.1(chr12:80412-25470329)x3 copy number gain See cases [RCV000053662] Chr12:80412..25470329 [GRCh38]
Chr12:282465..25623263 [GRCh37]
Chr12:59839..25514530 [NCBI36]
Chr12:12p13.33-12.1
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:212976-33926913)x4 copy number gain See cases [RCV000053666] Chr12:212976..33926913 [GRCh38]
Chr12:322142..34079848 [GRCh37]
Chr12:192403..33971115 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p12.3-12.1(chr12:15840854-22021652)x1 copy number loss See cases [RCV000135620] Chr12:15840854..22021652 [GRCh38]
Chr12:15993788..22174586 [GRCh37]
Chr12:15885055..22065853 [NCBI36]
Chr12:12p12.3-12.1
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:121255-34603274)x3 copy number gain See cases [RCV000136611] Chr12:121255..34603274 [GRCh38]
Chr12:282465..34756209 [GRCh37]
Chr12:100682..34647476 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:121271-34603261)x3 copy number gain See cases [RCV000139052] Chr12:121271..34603261 [GRCh38]
Chr12:282465..34756196 [GRCh37]
Chr12:100698..34647463 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:54427-34608071)x4 copy number gain See cases [RCV000139787] Chr12:54427..34608071 [GRCh38]
Chr12:282465..34761006 [GRCh37]
Chr12:33854..34652273 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh38/hg38 12p13.33-12.2(chr12:1258274-20657577)x3 copy number gain See cases [RCV000141905] Chr12:1258274..20657577 [GRCh38]
Chr12:1367440..20810511 [GRCh37]
Chr12:1237701..20701778 [NCBI36]
Chr12:12p13.33-12.2
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:64620-34682902)x4 copy number gain See cases [RCV000142149] Chr12:64620..34682902 [GRCh38]
Chr12:173786..34835837 [GRCh37]
Chr12:44047..34727104 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:148034-34178799)x4 copy number gain See cases [RCV000240164] Chr12:148034..34178799 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
chr12:10074776-18800953 complex variant complex Breast ductal adenocarcinoma [RCV000207105] Chr12:10074776..18800953 [GRCh37]
Chr12:12p13.31-12.3
uncertain significance
GRCh37/hg19 12p13.33-11.1(chr12:89061-34178799)x3 copy number gain See cases [RCV000240487] Chr12:89061..34178799 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.2-12.1(chr12:10853887-24103810)x1 copy number loss not provided [RCV002292878] Chr12:10853887..24103810 [GRCh37]
Chr12:12p13.2-12.1
pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869301)x3 copy number gain See cases [RCV000449191] Chr12:173786..37869301 [GRCh37]
Chr12:12p13.33-q11
pathogenic
GRCh37/hg19 12p13.33-12.1(chr12:173786-25286865)x3 copy number gain See cases [RCV000449287] Chr12:173786..25286865 [GRCh37]
Chr12:12p13.33-12.1
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x3 copy number gain See cases [RCV000447551] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-12.2(chr12:173786-20026080)x3 copy number gain See cases [RCV000446050] Chr12:173786..20026080 [GRCh37]
Chr12:12p13.33-12.2
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:189578-34756150) copy number gain See cases [RCV000446017] Chr12:189578..34756150 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:565369-34835837)x3 copy number gain See cases [RCV000511580] Chr12:565369..34835837 [GRCh37]
Chr12:12p13.33-11.1
likely pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-11.22(chr12:173786-28219229)x3 copy number gain See cases [RCV000510961] Chr12:173786..28219229 [GRCh37]
Chr12:12p13.33-11.22
pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869107)x3 copy number gain not provided [RCV000683480] Chr12:173786..37869107 [GRCh37]
Chr12:12p13.33-q11
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x2,3 copy number gain not provided [RCV000683478] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x3 copy number gain not provided [RCV000683479] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-11.21(chr12:191619-31733044)x3 copy number gain not provided [RCV000750245] Chr12:191619..31733044 [GRCh37]
Chr12:12p13.33-11.21
pathogenic
GRCh37/hg19 12p13.33-q11(chr12:274676-37869301)x4 copy number gain not provided [RCV001006470] Chr12:274676..37869301 [GRCh37]
Chr12:12p13.33-q11
pathogenic
NM_018640.5(LMO3):c.206+6501A>G single nucleotide variant not provided [RCV000924923] Chr12:16594154 [GRCh38]
Chr12:16747088 [GRCh37]
Chr12:12p12.3
likely benign
GRCh37/hg19 12p12.3-11.23(chr12:16141429-27733325)x1 copy number loss not provided [RCV000849815] Chr12:16141429..27733325 [GRCh37]
Chr12:12p12.3-11.23
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34496628)x3 copy number gain not provided [RCV000847209] Chr12:173786..34496628 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.2-12.3(chr12:11737824-16780886)x1 copy number loss not provided [RCV001006482] Chr12:11737824..16780886 [GRCh37]
Chr12:12p13.2-12.3
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837) copy number gain not specified [RCV002052957] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869301) copy number gain not specified [RCV002052958] Chr12:173786..37869301 [GRCh37]
Chr12:12p13.33-q11
pathogenic
GRCh37/hg19 12p13.33-12.1(chr12:173786-25286865) copy number gain not specified [RCV002052955] Chr12:173786..25286865 [GRCh37]
Chr12:12p13.33-12.1
pathogenic
GRCh37/hg19 12p12.3(chr12:16456165-16973987)x3 copy number gain not provided [RCV002473880] Chr12:16456165..16973987 [GRCh37]
Chr12:12p12.3
uncertain significance
NM_018640.5(LMO3):c.422C>T (p.Ala141Val) single nucleotide variant not specified [RCV004096682] Chr12:16551238 [GRCh38]
Chr12:16704172 [GRCh37]
Chr12:12p12.3
uncertain significance
GRCh37/hg19 12p13.33-11.1(chr12:176047-34179852)x4 copy number gain Pallister-Killian syndrome [RCV003154827] Chr12:176047..34179852 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
Single allele duplication not provided [RCV003448692] Chr12:188053..34856694 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835641)x3 copy number gain not specified [RCV003986979] Chr12:173786..34835641 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
NM_018640.5(LMO3):c.14A>G (p.Gln5Arg) single nucleotide variant not specified [RCV004407701] Chr12:16600847 [GRCh38]
Chr12:16753781 [GRCh37]
Chr12:12p12.3
uncertain significance
NM_018640.5(LMO3):c.34G>A (p.Gly12Ser) single nucleotide variant not specified [RCV004407702] Chr12:16600827 [GRCh38]
Chr12:16753761 [GRCh37]
Chr12:12p12.3
uncertain significance
NM_018640.5(LMO3):c.29C>T (p.Pro10Leu) single nucleotide variant not specified [RCV004637257] Chr12:16600832 [GRCh38]
Chr12:16753766 [GRCh37]
Chr12:12p12.3
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:14545
Count of miRNA genes:1187
Interacting mature miRNAs:1507
Transcripts:ENST00000261169, ENST00000320122, ENST00000332914, ENST00000354662, ENST00000396205, ENST00000424192, ENST00000439600, ENST00000441439, ENST00000447609, ENST00000453727, ENST00000534946, ENST00000535535, ENST00000536172, ENST00000536509, ENST00000537304, ENST00000537568, ENST00000537757, ENST00000538020, ENST00000538051, ENST00000539232, ENST00000539534, ENST00000540445, ENST00000540590, ENST00000540848, ENST00000541295, ENST00000541589, ENST00000541764, ENST00000541846, ENST00000543721, ENST00000544276, ENST00000544754, ENST00000545436, ENST00000546279, ENST00000546281
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597418779GWAS1514853_Hself reported educational attainment QTL GWAS1514853 (human)3e-11self reported educational attainment121660357416603575Human
597475807GWAS1571881_Hcigarettes per day measurement QTL GWAS1571881 (human)1e-10cigarettes per day measurement121659410016594101Human
597230778GWAS1326852_Hsmoking status measurement QTL GWAS1326852 (human)7e-14smoking status measurement121660243816602439Human
597144575GWAS1240649_Hsmoking initiation QTL GWAS1240649 (human)4e-14smoking initiation121659578716595788Human
597139679GWAS1235753_Hsmoking initiation QTL GWAS1235753 (human)8e-14smoking initiation121660243816602439Human
597345366GWAS1441440_Hsmoking initiation QTL GWAS1441440 (human)1e-09smoking initiation121659028316590284Human
597145850GWAS1241924_Htriglyceride measurement QTL GWAS1241924 (human)6e-10triglyceride measurementblood triglyceride level (CMO:0000118)121659050016590501Human
597138361GWAS1234435_Hbody height QTL GWAS1234435 (human)4e-10body height (VT:0001253)body height (CMO:0000106)121657786116577862Human
597231735GWAS1327809_Hsmoking status measurement QTL GWAS1327809 (human)9e-10smoking status measurement121659578716595788Human
597340052GWAS1436126_Hneuroticism measurement, cognitive function measurement QTL GWAS1436126 (human)1e-10neuroticism measurement, cognitive function measurement121659578716595788Human
597503762GWAS1599836_Halpha-hydroxyisovalerate measurement QTL GWAS1599836 (human)7e-08alpha-hydroxyisovalerate measurement121657459116574592Human
597481580GWAS1577654_Hmathematical ability QTL GWAS1577654 (human)9e-11mathematical ability121660357416603575Human
597044101GWAS1140175_Hsmoking initiation QTL GWAS1140175 (human)2e-08smoking initiation121659578716595788Human
597473288GWAS1569362_Hself reported educational attainment QTL GWAS1569362 (human)5e-10self reported educational attainment121659410016594101Human
597313506GWAS1409580_Htriglyceride measurement QTL GWAS1409580 (human)3e-08triglyceride measurementblood triglyceride level (CMO:0000118)121659050016590501Human
597374243GWAS1470317_HTourette syndrome QTL GWAS1470317 (human)0.000001Tourette syndrome121659916516599166Human
597490788GWAS1586862_Heducational attainment QTL GWAS1586862 (human)6e-26educational attainment121660357416603575Human
597232035GWAS1328109_Hsmoking cessation QTL GWAS1328109 (human)2e-12smoking cessation121660243816602439Human
597185731GWAS1281805_Hsmoking cessation QTL GWAS1281805 (human)4e-09smoking cessation121660243816602439Human
597476487GWAS1572561_Hself reported educational attainment QTL GWAS1572561 (human)2e-13self reported educational attainment121660357416603575Human
597242215GWAS1338289_Htriglyceride measurement QTL GWAS1338289 (human)2e-09triglyceride measurementblood triglyceride level (CMO:0000118)121659050016590501Human
597017803GWAS1113877_Hhousehold income QTL GWAS1113877 (human)6e-09household income121660357416603575Human
597463491GWAS1559565_Hworry measurement QTL GWAS1559565 (human)8e-10worry measurement121660103116601032Human
597501218GWAS1597292_Htea consumption measurement QTL GWAS1597292 (human)2e-09tea consumption measurementdrink intake measurement (CMO:0000771)121660103116601032Human

Markers in Region
BCD1517  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,702,177 - 16,702,238UniSTSGRCh37
Build 361216,593,444 - 16,593,505RGDNCBI36
Celera1221,845,954 - 21,846,015RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,470,643 - 16,470,704UniSTS
GeneMap99-GB4 RH Map1267.74UniSTS
NCBI RH Map12187.8UniSTS
RH91802  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,703,794 - 16,703,896UniSTSGRCh37
Build 361216,595,061 - 16,595,163RGDNCBI36
Celera1221,847,571 - 21,847,673RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,472,260 - 16,472,362UniSTS
GeneMap99-GB4 RH Map1246.5UniSTS
G62377  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,748,742 - 16,748,950UniSTSGRCh37
Build 361216,640,009 - 16,640,217RGDNCBI36
Celera1221,892,527 - 21,892,735RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,517,201 - 16,517,409UniSTS
D12S383E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,728,548 - 16,728,646UniSTSGRCh37
Build 361216,619,815 - 16,619,913RGDNCBI36
Celera1221,872,326 - 21,872,424RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,497,003 - 16,497,101UniSTS
GDB:214810  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,753,579 - 16,753,812UniSTSGRCh37
Build 361216,644,846 - 16,645,079RGDNCBI36
Celera1221,897,364 - 21,897,597RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,522,037 - 16,522,270UniSTS
A002A33  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,701,418 - 16,701,669UniSTSGRCh37
Build 361216,592,685 - 16,592,936RGDNCBI36
Celera1221,845,195 - 21,845,446RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,469,884 - 16,470,135UniSTS
GeneMap99-GB4 RH Map1269.91UniSTS
NCBI RH Map12187.8UniSTS
G19860  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,701,418 - 16,701,669UniSTSGRCh37
Build 361216,592,685 - 16,592,936RGDNCBI36
Celera1221,845,195 - 21,845,446RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,469,884 - 16,470,135UniSTS
RH66254  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,728,509 - 16,728,642UniSTSGRCh37
Build 361216,619,776 - 16,619,909RGDNCBI36
Celera1221,872,287 - 21,872,420RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,496,964 - 16,497,097UniSTS
GeneMap99-GB4 RH Map1267.74UniSTS
RH1605  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,701,428 - 16,701,602UniSTSGRCh37
Build 361216,592,695 - 16,592,869RGDNCBI36
Celera1221,845,205 - 21,845,379RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,469,894 - 16,470,068UniSTS
GeneMap99-GB4 RH Map1246.83UniSTS
SHGC-30138  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371216,701,079 - 16,701,203UniSTSGRCh37
Build 361216,592,346 - 16,592,470RGDNCBI36
Celera1221,844,856 - 21,844,980RGD
Cytogenetic Map12p12.3UniSTS
HuRef1216,469,545 - 16,469,669UniSTS
TNG Radiation Hybrid Map126963.0UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
1204 2356 2788 2229 4879 1643 2208 2 548 1645 386 2206 6792 6158 34 3702 782 1684 1551 168

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001001395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001243613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_018640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_045012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_045013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_045014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006719111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017019643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024449058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047429156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372561 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054372562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB044745 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB044746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC007552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF258348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK095595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK294909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK312418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK316021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL050152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL050188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG714670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI553855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ029059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA780743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC318689 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DC324870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF455616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M64358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000261169   ⟹   ENSP00000261169
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,373 - 16,605,379 (-)Ensembl
Ensembl Acc Id: ENST00000320122   ⟹   ENSP00000312856
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,424 - 16,605,379 (-)Ensembl
Ensembl Acc Id: ENST00000332914
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,560,506 - 16,610,094 (-)Ensembl
Ensembl Acc Id: ENST00000354662   ⟹   ENSP00000346689
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,373 - 16,608,214 (-)Ensembl
Ensembl Acc Id: ENST00000396205   ⟹   ENSP00000379508
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,424 - 16,608,104 (-)Ensembl
Ensembl Acc Id: ENST00000424192   ⟹   ENSP00000404656
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,550,968 - 16,609,824 (-)Ensembl
Ensembl Acc Id: ENST00000439600
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,600,017 - 16,605,056 (-)Ensembl
Ensembl Acc Id: ENST00000441439   ⟹   ENSP00000412479
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,420 - 16,608,135 (-)Ensembl
Ensembl Acc Id: ENST00000447609   ⟹   ENSP00000413703
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,421 - 16,606,800 (-)Ensembl
Ensembl Acc Id: ENST00000453727   ⟹   ENSP00000404386
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,549,375 - 16,606,440 (-)Ensembl
Ensembl Acc Id: ENST00000534946   ⟹   ENSP00000439275
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,550,875 - 16,609,889 (-)Ensembl
Ensembl Acc Id: ENST00000535535   ⟹   ENSP00000446115
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,550,383 - 16,605,970 (-)Ensembl
Ensembl Acc Id: ENST00000536172   ⟹   ENSP00000440885
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,228 - 16,607,185 (-)Ensembl
Ensembl Acc Id: ENST00000536509
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,560,475 - 16,607,924 (-)Ensembl
Ensembl Acc Id: ENST00000537304   ⟹   ENSP00000440099
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,372 - 16,606,162 (-)Ensembl
Ensembl Acc Id: ENST00000537568
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,594,252 - 16,610,089 (-)Ensembl
Ensembl Acc Id: ENST00000537757   ⟹   ENSP00000445193
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,304 - 16,607,389 (-)Ensembl
Ensembl Acc Id: ENST00000538020   ⟹   ENSP00000446095
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,600,686 - 16,602,293 (-)Ensembl
Ensembl Acc Id: ENST00000538051   ⟹   ENSP00000445504
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,560,453 - 16,608,214 (-)Ensembl
Ensembl Acc Id: ENST00000539232   ⟹   ENSP00000438187
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,318 - 16,605,913 (-)Ensembl
Ensembl Acc Id: ENST00000539534   ⟹   ENSP00000443807
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,304 - 16,602,196 (-)Ensembl
Ensembl Acc Id: ENST00000540445   ⟹   ENSP00000442786
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,045 - 16,607,150 (-)Ensembl
Ensembl Acc Id: ENST00000540590   ⟹   ENSP00000439989
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,560,492 - 16,610,037 (-)Ensembl
Ensembl Acc Id: ENST00000540848   ⟹   ENSP00000445751
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,550,199 - 16,610,526 (-)Ensembl
Ensembl Acc Id: ENST00000541295   ⟹   ENSP00000446463
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,373 - 16,605,970 (-)Ensembl
Ensembl Acc Id: ENST00000541589   ⟹   ENSP00000440948
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,550,202 - 16,608,027 (-)Ensembl
Ensembl Acc Id: ENST00000541764   ⟹   ENSP00000437890
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,550,810 - 16,607,006 (-)Ensembl
Ensembl Acc Id: ENST00000541846   ⟹   ENSP00000444393
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,182 - 16,610,594 (-)Ensembl
Ensembl Acc Id: ENST00000543721
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,597,616 - 16,607,122 (-)Ensembl
Ensembl Acc Id: ENST00000544276
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,598,875 - 16,608,088 (-)Ensembl
Ensembl Acc Id: ENST00000544754   ⟹   ENSP00000439900
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,232 - 16,608,000 (-)Ensembl
Ensembl Acc Id: ENST00000545436   ⟹   ENSP00000444269
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,560,481 - 16,604,849 (-)Ensembl
Ensembl Acc Id: ENST00000546279   ⟹   ENSP00000441360
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,560,413 - 16,608,726 (-)Ensembl
Ensembl Acc Id: ENST00000546281   ⟹   ENSP00000442713
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,551,304 - 16,607,355 (-)Ensembl
Ensembl Acc Id: ENST00000616247   ⟹   ENSP00000481643
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1216,548,373 - 16,600,860 (-)Ensembl
RefSeq Acc Id: NM_001001395   ⟹   NP_001001395
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,608,214 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
Build 361216,592,574 - 16,652,291 (-)NCBI Archive
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,726,164 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,485,602 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001243609   ⟹   NP_001230538
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,608,214 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,726,164 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,485,602 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001243610   ⟹   NP_001230539
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,606,800 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,724,750 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,484,190 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001243611   ⟹   NP_001230540
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,605,379 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,723,332 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,482,771 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001243612   ⟹   NP_001230541
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,605,970 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,723,921 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,483,361 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001243613   ⟹   NP_001230542
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,607,150 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,725,100 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,484,540 (-)NCBI
Sequence:
RefSeq Acc Id: NM_018640   ⟹   NP_061110
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,606,162 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
Build 361216,592,574 - 16,650,698 (-)NCBI Archive
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,724,552 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,483,553 (-)NCBI
Sequence:
RefSeq Acc Id: NR_045012
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,608,214 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,726,164 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,485,602 (-)NCBI
Sequence:
RefSeq Acc Id: NR_045013
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,608,214 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,726,164 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,485,602 (-)NCBI
Sequence:
RefSeq Acc Id: NR_045014
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,608,214 (-)NCBI
GRCh371216,701,306 - 16,761,148 (-)NCBI
HuRef1216,469,772 - 16,529,598 (-)NCBI
CHM1_11216,666,323 - 16,726,164 (-)NCBI
T2T-CHM13v2.01216,425,771 - 16,485,602 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006719110   ⟹   XP_006719173
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,607,025 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006719111   ⟹   XP_006719174
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,610,174 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011520762   ⟹   XP_011519064
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,606,497 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047429153   ⟹   XP_047285109
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,610,174 (-)NCBI
RefSeq Acc Id: XM_047429154   ⟹   XP_047285110
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,598,879 (-)NCBI
RefSeq Acc Id: XM_047429155   ⟹   XP_047285111
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,598,802 - 16,605,379 (-)NCBI
RefSeq Acc Id: XM_047429156   ⟹   XP_047285112
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,548,372 - 16,605,379 (-)NCBI
RefSeq Acc Id: XM_054372558   ⟹   XP_054228533
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01216,425,771 - 16,483,885 (-)NCBI
RefSeq Acc Id: XM_054372559   ⟹   XP_054228534
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01216,425,771 - 16,484,415 (-)NCBI
RefSeq Acc Id: XM_054372560   ⟹   XP_054228535
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01216,425,771 - 16,487,621 (-)NCBI
RefSeq Acc Id: XM_054372561   ⟹   XP_054228536
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01216,425,771 - 16,476,272 (-)NCBI
RefSeq Acc Id: XM_054372562   ⟹   XP_054228537
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01216,425,771 - 16,482,771 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001001395 (Get FASTA)   NCBI Sequence Viewer  
  NP_001230538 (Get FASTA)   NCBI Sequence Viewer  
  NP_001230539 (Get FASTA)   NCBI Sequence Viewer  
  NP_001230540 (Get FASTA)   NCBI Sequence Viewer  
  NP_001230541 (Get FASTA)   NCBI Sequence Viewer  
  NP_001230542 (Get FASTA)   NCBI Sequence Viewer  
  NP_061110 (Get FASTA)   NCBI Sequence Viewer  
  XP_006719173 (Get FASTA)   NCBI Sequence Viewer  
  XP_006719174 (Get FASTA)   NCBI Sequence Viewer  
  XP_011519064 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285109 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285110 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285111 (Get FASTA)   NCBI Sequence Viewer  
  XP_047285112 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228533 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228534 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228535 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228536 (Get FASTA)   NCBI Sequence Viewer  
  XP_054228537 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF71368 (Get FASTA)   NCBI Sequence Viewer  
  AAH17777 (Get FASTA)   NCBI Sequence Viewer  
  AAH26311 (Get FASTA)   NCBI Sequence Viewer  
  AAH50085 (Get FASTA)   NCBI Sequence Viewer  
  BAC04582 (Get FASTA)   NCBI Sequence Viewer  
  BAD93349 (Get FASTA)   NCBI Sequence Viewer  
  BAD93350 (Get FASTA)   NCBI Sequence Viewer  
  BAG35328 (Get FASTA)   NCBI Sequence Viewer  
  BAG57701 (Get FASTA)   NCBI Sequence Viewer  
  BAG57826 (Get FASTA)   NCBI Sequence Viewer  
  BAG57996 (Get FASTA)   NCBI Sequence Viewer  
  BAH14392 (Get FASTA)   NCBI Sequence Viewer  
  EAW96370 (Get FASTA)   NCBI Sequence Viewer  
  EAW96371 (Get FASTA)   NCBI Sequence Viewer  
  EAW96372 (Get FASTA)   NCBI Sequence Viewer  
  EAW96373 (Get FASTA)   NCBI Sequence Viewer  
  EAW96374 (Get FASTA)   NCBI Sequence Viewer  
  EAW96375 (Get FASTA)   NCBI Sequence Viewer  
  EAW96376 (Get FASTA)   NCBI Sequence Viewer  
  EAW96377 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000261169
  ENSP00000261169.6
  ENSP00000312856.6
  ENSP00000346689
  ENSP00000346689.1
  ENSP00000379508.2
  ENSP00000404386.2
  ENSP00000404656.2
  ENSP00000412479
  ENSP00000412479.2
  ENSP00000413703
  ENSP00000413703.1
  ENSP00000437890.1
  ENSP00000438187.1
  ENSP00000439275
  ENSP00000439275.1
  ENSP00000439900.1
  ENSP00000439989.1
  ENSP00000440099
  ENSP00000440099.1
  ENSP00000440885.1
  ENSP00000440948.1
  ENSP00000441360.1
  ENSP00000442713.1
  ENSP00000442786
  ENSP00000442786.1
  ENSP00000443807.1
  ENSP00000444269.1
  ENSP00000444393.1
  ENSP00000445193.1
  ENSP00000445504.1
  ENSP00000445751.1
  ENSP00000446095.1
  ENSP00000446115.1
  ENSP00000446463
  ENSP00000446463.1
GenBank Protein Q8TAP4 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001001395   ⟸   NM_001001395
- Peptide Label: isoform 1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_061110   ⟸   NM_018640
- Peptide Label: isoform 1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001230538   ⟸   NM_001243609
- Peptide Label: isoform 1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001230542   ⟸   NM_001243613
- Peptide Label: isoform 4
- UniProtKB: Q8TAP4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001230539   ⟸   NM_001243610
- Peptide Label: isoform 1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001230541   ⟸   NM_001243612
- Peptide Label: isoform 3
- UniProtKB: B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001230540   ⟸   NM_001243611
- Peptide Label: isoform 2
- UniProtKB: B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006719174   ⟸   XM_006719111
- Peptide Label: isoform X1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006719173   ⟸   XM_006719110
- Peptide Label: isoform X1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011519064   ⟸   XM_011520762
- Peptide Label: isoform X1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000446463   ⟸   ENST00000541295
Ensembl Acc Id: ENSP00000444393   ⟸   ENST00000541846
Ensembl Acc Id: ENSP00000437890   ⟸   ENST00000541764
Ensembl Acc Id: ENSP00000440948   ⟸   ENST00000541589
Ensembl Acc Id: ENSP00000404656   ⟸   ENST00000424192
Ensembl Acc Id: ENSP00000439900   ⟸   ENST00000544754
Ensembl Acc Id: ENSP00000312856   ⟸   ENST00000320122
Ensembl Acc Id: ENSP00000444269   ⟸   ENST00000545436
Ensembl Acc Id: ENSP00000441360   ⟸   ENST00000546279
Ensembl Acc Id: ENSP00000442713   ⟸   ENST00000546281
Ensembl Acc Id: ENSP00000404386   ⟸   ENST00000453727
Ensembl Acc Id: ENSP00000412479   ⟸   ENST00000441439
Ensembl Acc Id: ENSP00000439275   ⟸   ENST00000534946
Ensembl Acc Id: ENSP00000446115   ⟸   ENST00000535535
Ensembl Acc Id: ENSP00000440885   ⟸   ENST00000536172
Ensembl Acc Id: ENSP00000440099   ⟸   ENST00000537304
Ensembl Acc Id: ENSP00000445193   ⟸   ENST00000537757
Ensembl Acc Id: ENSP00000445504   ⟸   ENST00000538051
Ensembl Acc Id: ENSP00000446095   ⟸   ENST00000538020
Ensembl Acc Id: ENSP00000481643   ⟸   ENST00000616247
Ensembl Acc Id: ENSP00000443807   ⟸   ENST00000539534
Ensembl Acc Id: ENSP00000438187   ⟸   ENST00000539232
Ensembl Acc Id: ENSP00000346689   ⟸   ENST00000354662
Ensembl Acc Id: ENSP00000261169   ⟸   ENST00000261169
Ensembl Acc Id: ENSP00000413703   ⟸   ENST00000447609
Ensembl Acc Id: ENSP00000379508   ⟸   ENST00000396205
Ensembl Acc Id: ENSP00000442786   ⟸   ENST00000540445
Ensembl Acc Id: ENSP00000445751   ⟸   ENST00000540848
Ensembl Acc Id: ENSP00000439989   ⟸   ENST00000540590
RefSeq Acc Id: XP_047285109   ⟸   XM_047429153
- Peptide Label: isoform X1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047285112   ⟸   XM_047429156
- Peptide Label: isoform X4
RefSeq Acc Id: XP_047285110   ⟸   XM_047429154
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047285111   ⟸   XM_047429155
- Peptide Label: isoform X3
- UniProtKB: F5H655 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054228535   ⟸   XM_054372560
- Peptide Label: isoform X1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054228534   ⟸   XM_054372559
- Peptide Label: isoform X1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054228533   ⟸   XM_054372558
- Peptide Label: isoform X1
- UniProtKB: Q9UDD5 (UniProtKB/Swiss-Prot),   Q8TAP4 (UniProtKB/Swiss-Prot),   Q8N974 (UniProtKB/Swiss-Prot),   Q58A67 (UniProtKB/Swiss-Prot),   Q58A66 (UniProtKB/Swiss-Prot),   B4DH35 (UniProtKB/Swiss-Prot),   B4DG90 (UniProtKB/Swiss-Prot),   B2R631 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054228537   ⟸   XM_054372562
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054228536   ⟸   XM_054372561
- Peptide Label: isoform X2
Protein Domains
LIM zinc-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8TAP4-F1-model_v2 AlphaFold Q8TAP4 1-145 view protein structure

Promoters
RGD ID:7223343
Promoter ID:EPDNEW_H17417
Type:multiple initiation site
Name:LMO3_5
Description:LIM domain only 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H17418  EPDNEW_H17419  EPDNEW_H17421  EPDNEW_H17420  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,605,028 - 16,605,088EPDNEW
RGD ID:7223345
Promoter ID:EPDNEW_H17418
Type:initiation region
Name:LMO3_1
Description:LIM domain only 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H17417  EPDNEW_H17419  EPDNEW_H17421  EPDNEW_H17420  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,606,487 - 16,606,547EPDNEW
RGD ID:7223347
Promoter ID:EPDNEW_H17419
Type:initiation region
Name:LMO3_4
Description:LIM domain only 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H17417  EPDNEW_H17418  EPDNEW_H17421  EPDNEW_H17420  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,607,100 - 16,607,160EPDNEW
RGD ID:7223351
Promoter ID:EPDNEW_H17420
Type:initiation region
Name:LMO3_2
Description:LIM domain only 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H17417  EPDNEW_H17418  EPDNEW_H17419  EPDNEW_H17421  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381216,608,115 - 16,608,175EPDNEW
RGD ID:6790200
Promoter ID:HG_KWN:15138
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:UC001RDJ.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361216,649,936 - 16,650,436 (-)MPROMDB
RGD ID:6790302
Promoter ID:HG_KWN:15139
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:NM_018640,   UC001RDL.1,   UC009ZII.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361216,650,559 - 16,651,059 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:6643 AgrOrtholog
COSMIC LMO3 COSMIC
Ensembl Genes ENSG00000048540 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000261169 ENTREZGENE
  ENST00000261169.10 UniProtKB/Swiss-Prot
  ENST00000320122.10 UniProtKB/Swiss-Prot
  ENST00000354662 ENTREZGENE
  ENST00000354662.5 UniProtKB/Swiss-Prot
  ENST00000396205 ENTREZGENE
  ENST00000396205.6 UniProtKB/TrEMBL
  ENST00000424192.6 UniProtKB/TrEMBL
  ENST00000441439 ENTREZGENE
  ENST00000441439.6 UniProtKB/Swiss-Prot
  ENST00000447609 ENTREZGENE
  ENST00000447609.5 UniProtKB/Swiss-Prot
  ENST00000453727.6 UniProtKB/TrEMBL
  ENST00000534946 ENTREZGENE
  ENST00000534946.5 UniProtKB/Swiss-Prot
  ENST00000535535.5 UniProtKB/Swiss-Prot
  ENST00000536172.5 UniProtKB/TrEMBL
  ENST00000537304 ENTREZGENE
  ENST00000537304.6 UniProtKB/Swiss-Prot
  ENST00000537757.5 UniProtKB/TrEMBL
  ENST00000538020.1 UniProtKB/TrEMBL
  ENST00000538051.5 UniProtKB/TrEMBL
  ENST00000539232.1 UniProtKB/TrEMBL
  ENST00000539534.5 UniProtKB/TrEMBL
  ENST00000540445 ENTREZGENE
  ENST00000540445.5 UniProtKB/Swiss-Prot
  ENST00000540590.1 UniProtKB/TrEMBL
  ENST00000540848.5 UniProtKB/Swiss-Prot
  ENST00000541295 ENTREZGENE
  ENST00000541295.5 UniProtKB/Swiss-Prot
  ENST00000541589.5 UniProtKB/TrEMBL
  ENST00000541764.5 UniProtKB/TrEMBL
  ENST00000541846.5 UniProtKB/Swiss-Prot
  ENST00000544754.1 UniProtKB/TrEMBL
  ENST00000545436.5 UniProtKB/TrEMBL
  ENST00000546279.5 UniProtKB/TrEMBL
  ENST00000546281.5 UniProtKB/TrEMBL
Gene3D-CATH Cysteine Rich Protein UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000048540 GTEx
HGNC ID HGNC:6643 ENTREZGENE
Human Proteome Map LMO3 Human Proteome Map
InterPro LMO_RBTN_TF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_LIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:55885 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene LMO3 ENTREZGENE
OMIM 180386 OMIM
PANTHER LD11652P UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LIM DOMAIN ONLY PROTEIN 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam LIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA30409 PharmGKB
PROSITE LIM_DOMAIN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LIM_DOMAIN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART LIM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2R631 ENTREZGENE, UniProtKB/TrEMBL
  B4DG90 ENTREZGENE
  B4DH35 ENTREZGENE
  C9JE61_HUMAN UniProtKB/TrEMBL
  F5GYZ6_HUMAN UniProtKB/TrEMBL
  F5GZR3_HUMAN UniProtKB/TrEMBL
  F5H2N9_HUMAN UniProtKB/TrEMBL
  F5H3S4_HUMAN UniProtKB/TrEMBL
  F5H4K9_HUMAN UniProtKB/TrEMBL
  F5H4T0_HUMAN UniProtKB/TrEMBL
  F5H655 ENTREZGENE, UniProtKB/TrEMBL
  F6TDU8_HUMAN UniProtKB/TrEMBL
  LMO3_HUMAN UniProtKB/Swiss-Prot
  Q05D86_HUMAN UniProtKB/TrEMBL
  Q58A66 ENTREZGENE
  Q58A67 ENTREZGENE
  Q8N974 ENTREZGENE
  Q8TAP4 ENTREZGENE
  Q9NYC6_HUMAN UniProtKB/TrEMBL
  Q9UDD5 ENTREZGENE
UniProt Secondary B4DG90 UniProtKB/Swiss-Prot
  B4DH35 UniProtKB/Swiss-Prot
  Q58A66 UniProtKB/Swiss-Prot
  Q58A67 UniProtKB/Swiss-Prot
  Q8N974 UniProtKB/Swiss-Prot
  Q9UDD5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-01 LMO3  LIM domain only 3  LMO3  LIM domain only 3 (rhombotin-like 2)  Symbol and/or name change 5135510 APPROVED