TCERG1L (transcription elongation regulator 1 like) - Rat Genome Database

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Gene: TCERG1L (transcription elongation regulator 1 like) Homo sapiens
Analyze
Symbol: TCERG1L
Name: transcription elongation regulator 1 like
RGD ID: 1346689
HGNC Page HGNC:23533
Description: Predicted to enable RNA polymerase binding activity and transcription coregulator activity. Predicted to be active in nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5730476P14Rik; MGC126584; transcription elongation regulator 1-like protein
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810131,092,391 - 131,311,721 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10131,092,391 - 131,311,721 (-)EnsemblGRCh38hg38GRCh38
GRCh3710132,890,654 - 133,109,984 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610132,780,645 - 132,999,974 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410132,780,645 - 132,999,974NCBI
Celera10126,561,440 - 126,778,379 (-)NCBICelera
Cytogenetic Map10q26.3NCBI
HuRef10126,465,458 - 126,680,284 (-)NCBIHuRef
CHM1_110133,171,642 - 133,388,645 (-)NCBICHM1_1
T2T-CHM13v2.010132,027,431 - 132,247,342 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:12477932   PMID:14702039   PMID:16385451   PMID:20379614   PMID:20732627   PMID:21490949   PMID:21873635   PMID:22412388   PMID:22791750   PMID:22832960   PMID:26344197  


Genomics

Comparative Map Data
TCERG1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810131,092,391 - 131,311,721 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10131,092,391 - 131,311,721 (-)EnsemblGRCh38hg38GRCh38
GRCh3710132,890,654 - 133,109,984 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3610132,780,645 - 132,999,974 (-)NCBINCBI36Build 36hg18NCBI36
Build 3410132,780,645 - 132,999,974NCBI
Celera10126,561,440 - 126,778,379 (-)NCBICelera
Cytogenetic Map10q26.3NCBI
HuRef10126,465,458 - 126,680,284 (-)NCBIHuRef
CHM1_110133,171,642 - 133,388,645 (-)NCBICHM1_1
T2T-CHM13v2.010132,027,431 - 132,247,342 (-)NCBIT2T-CHM13v2.0
Tcerg1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397137,810,701 - 137,999,459 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7137,810,703 - 137,999,459 (-)EnsemblGRCm39 Ensembl
GRCm387138,208,972 - 138,397,730 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7138,208,974 - 138,397,730 (-)EnsemblGRCm38mm10GRCm38
MGSCv377145,400,655 - 145,589,413 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367138,096,930 - 138,236,073 (-)NCBIMGSCv36mm8
MGSCv367128,355,194 - 128,497,300 (-)NCBIMGSCv36mm8
Celera7138,022,329 - 138,213,008 (-)NCBICelera
Cytogenetic Map7F4NCBI
cM Map782.95NCBI
Tcerg1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81202,442,605 - 202,630,483 (-)NCBIGRCr8
mRatBN7.21193,012,937 - 193,201,860 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1193,012,937 - 193,200,913 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1201,375,324 - 201,563,633 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01208,520,105 - 208,708,148 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01201,193,578 - 201,381,637 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01210,550,668 - 210,739,600 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1210,550,668 - 210,739,600 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01217,478,056 - 217,666,989 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41197,973,674 - 198,166,491 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1190,706,974 - 190,894,300 (-)NCBICelera
Cytogenetic Map1q41NCBI
Tcerg1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554778,652,246 - 8,850,445 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554778,652,282 - 8,850,439 (-)NCBIChiLan1.0ChiLan1.0
TCERG1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28143,035,774 - 143,255,460 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110143,041,130 - 143,260,816 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010127,777,993 - 127,997,905 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110131,980,815 - 132,199,060 (-)NCBIpanpan1.1PanPan1.1panPan2
TCERG1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12839,421,134 - 39,599,692 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2839,421,832 - 39,599,692 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2839,478,156 - 39,660,381 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02840,057,567 - 40,239,700 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2840,057,572 - 40,285,067 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12839,540,470 - 39,722,768 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02839,532,678 - 39,716,355 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02839,845,186 - 40,028,028 (-)NCBIUU_Cfam_GSD_1.0
Tcerg1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244072137,575,838 - 7,743,572 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648617,817,726 - 17,985,466 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648617,817,739 - 17,876,408 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TCERG1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14139,774,199 - 139,954,817 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114139,774,084 - 139,957,273 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214151,954,351 - 152,031,153 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TCERG1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19123,679,039 - 123,901,645 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604885,064,591 - 85,296,884 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tcerg1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473715,644,238 - 15,868,364 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473715,644,238 - 15,868,287 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TCERG1L
46 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 10q25.2-26.3(chr10:111313099-133620674)x3 copy number gain See cases [RCV000051218] Chr10:111313099..133620674 [GRCh38]
Chr10:113072857..135434178 [GRCh37]
Chr10:113062847..135284168 [NCBI36]
Chr10:10q25.2-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:122265252-133620674)x1 copy number loss See cases [RCV000051069] Chr10:122265252..133620674 [GRCh38]
Chr10:124024767..135434178 [GRCh37]
Chr10:124014757..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:131063816-131761750)x3 copy number gain See cases [RCV000051099] Chr10:131063816..131761750 [GRCh38]
Chr10:132862079..133594086 [GRCh37]
Chr10:132752069..133444076 [NCBI36]
Chr10:10q26.3		 uncertain significance
GRCh38/hg38 10q26.12-26.3(chr10:120454430-133620674)x1 copy number loss See cases [RCV000051103] Chr10:120454430..133620674 [GRCh38]
Chr10:122213942..135434178 [GRCh37]
Chr10:122203932..135284168 [NCBI36]
Chr10:10q26.12-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123307835-133620674)x1 copy number loss See cases [RCV000051150] Chr10:123307835..133620674 [GRCh38]
Chr10:125067351..135434178 [GRCh37]
Chr10:125057341..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:126256585-133613938)x1 copy number loss See cases [RCV000052612] Chr10:126256585..133613938 [GRCh38]
Chr10:127945154..135427442 [GRCh37]
Chr10:127935144..135277432 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:127500483-133620674)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052613]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052613]|See cases [RCV000052613] Chr10:127500483..133620674 [GRCh38]
Chr10:129298747..135434178 [GRCh37]
Chr10:129188737..135284168 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:129673966-133613938)x1 copy number loss See cases [RCV000052614] Chr10:129673966..133613938 [GRCh38]
Chr10:131472230..135427442 [GRCh37]
Chr10:131362220..135277432 [NCBI36]
Chr10:10q26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:129758596-133620674)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052615]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000052615]|See cases [RCV000052615] Chr10:129758596..133620674 [GRCh38]
Chr10:131556860..135434178 [GRCh37]
Chr10:131446850..135284168 [NCBI36]
Chr10:10q26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:129763050-131379342)x1 copy number loss See cases [RCV000052616] Chr10:129763050..131379342 [GRCh38]
Chr10:131561314..133177605 [GRCh37]
Chr10:131451304..133067595 [NCBI36]
Chr10:10q26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123580320-133558988)x1 copy number loss See cases [RCV000052611] Chr10:123580320..133558988 [GRCh38]
Chr10:125339836..135372492 [GRCh37]
Chr10:125329826..135222482 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q23.31-26.3(chr10:91048545-133620674)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053560]|See cases [RCV000053560] Chr10:91048545..133620674 [GRCh38]
Chr10:92808302..135434178 [GRCh37]
Chr10:92798282..135284168 [NCBI36]
Chr10:10q23.31-26.3		 pathogenic
GRCh38/hg38 10q24.31-26.3(chr10:100194215-132432797)x3 copy number gain See cases [RCV000053564] Chr10:100194215..132432797 [GRCh38]
Chr10:101953972..134246301 [GRCh37]
Chr10:101943962..134096291 [NCBI36]
Chr10:10q24.31-26.3		 pathogenic
GRCh38/hg38 10q25.1-26.3(chr10:106925303-133620815)x3 copy number gain See cases [RCV000053588] Chr10:106925303..133620815 [GRCh38]
Chr10:108685061..135434319 [GRCh37]
Chr10:108675051..135284309 [NCBI36]
Chr10:10q25.1-26.3		 pathogenic
GRCh38/hg38 10q26.11-26.3(chr10:117866565-133554210)x3 copy number gain See cases [RCV000053589] Chr10:117866565..133554210 [GRCh38]
Chr10:119626076..135367714 [GRCh37]
Chr10:119616066..135217704 [NCBI36]
Chr10:10q26.11-26.3		 pathogenic
NM_174937.3(TCERG1L):c.946-1004C>A single nucleotide variant Lung cancer [RCV000108842] Chr10:131164214 [GRCh38]
Chr10:132962477 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.3(TCERG1L):c.856+14020C>T single nucleotide variant Lung cancer [RCV000108843] Chr10:131246239 [GRCh38]
Chr10:133044502 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.3(TCERG1L):c.671-2255G>A single nucleotide variant Lung cancer [RCV000108844] Chr10:131262699 [GRCh38]
Chr10:133060962 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q25.2-26.3(chr10:114544537-135427143)x3 copy number gain not provided [RCV000847820] Chr10:114544537..135427143 [GRCh37]
Chr10:10q25.2-26.3		 pathogenic
GRCh38/hg38 10q25.1-26.3(chr10:108102587-133620674)x3 copy number gain See cases [RCV000133688] Chr10:108102587..133620674 [GRCh38]
Chr10:109862345..135434178 [GRCh37]
Chr10:109852335..135284168 [NCBI36]
Chr10:10q25.1-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:125657472-133620674)x1 copy number loss See cases [RCV000133741] Chr10:125657472..133620674 [GRCh38]
Chr10:127346041..135434178 [GRCh37]
Chr10:127336031..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:126730896-133620609)x1 copy number loss See cases [RCV000134040] Chr10:126730896..133620609 [GRCh38]
Chr10:128419465..135434113 [GRCh37]
Chr10:128409455..135284103 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:127640489-132776585)x1 copy number loss See cases [RCV000135728] Chr10:127640489..132776585 [GRCh38]
Chr10:129438753..134590089 [GRCh37]
Chr10:129328743..134440079 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:129549258-133620674)x1 copy number loss See cases [RCV000135547] Chr10:129549258..133620674 [GRCh38]
Chr10:131347522..135434178 [GRCh37]
Chr10:131237512..135284168 [NCBI36]
Chr10:10q26.3		 pathogenic|likely benign
GRCh38/hg38 10q26.13-26.3(chr10:124473108-133620609)x1 copy number loss See cases [RCV000136028] Chr10:124473108..133620609 [GRCh38]
Chr10:126161677..135434113 [GRCh37]
Chr10:126151667..135284103 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:128872419-133564028)x3 copy number gain See cases [RCV000136888] Chr10:128872419..133564028 [GRCh38]
Chr10:130670683..135377532 [GRCh37]
Chr10:130560673..135227522 [NCBI36]
Chr10:10q26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:124834858-133622588)x1 copy number loss See cases [RCV000137653] Chr10:124834858..133622588 [GRCh38]
Chr10:126523427..135436092 [GRCh37]
Chr10:126513417..135286082 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:128549913-133622588)x1 copy number loss See cases [RCV000138159] Chr10:128549913..133622588 [GRCh38]
Chr10:130348177..135436092 [GRCh37]
Chr10:130238167..135286082 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic|uncertain significance
GRCh38/hg38 10q26.2-26.3(chr10:127849717-133622588)x1 copy number loss See cases [RCV000138160] Chr10:127849717..133622588 [GRCh38]
Chr10:129647981..135436092 [GRCh37]
Chr10:129537971..135286082 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic|likely benign
GRCh38/hg38 10q24.31-26.3(chr10:100600492-133622588)x3 copy number gain See cases [RCV000137747] Chr10:100600492..133622588 [GRCh38]
Chr10:102360249..135436092 [GRCh37]
Chr10:102350239..135286082 [NCBI36]
Chr10:10q24.31-26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:129427520-133622588)x1 copy number loss See cases [RCV000137959] Chr10:129427520..133622588 [GRCh38]
Chr10:131225784..135436092 [GRCh37]
Chr10:131115774..135286082 [NCBI36]
Chr10:10q26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:122881207-133620609)x1 copy number loss See cases [RCV000138435] Chr10:122881207..133620609 [GRCh38]
Chr10:124640723..135434113 [GRCh37]
Chr10:124630713..135284103 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.12-26.3(chr10:120970558-133622588)x1 copy number loss See cases [RCV000139344] Chr10:120970558..133622588 [GRCh38]
Chr10:122730071..135436092 [GRCh37]
Chr10:122720061..135286082 [NCBI36]
Chr10:10q26.12-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:125021995-133620609)x1 copy number loss See cases [RCV000139588] Chr10:125021995..133620609 [GRCh38]
Chr10:126710564..135434113 [GRCh37]
Chr10:126700554..135284103 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:125452905-133785874)x3 copy number gain See cases [RCV000141337] Chr10:125452905..133785874 [GRCh38]
Chr10:127141474..135523199 [GRCh37]
Chr10:127131464..135373189 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:127664168-133622588)x3 copy number gain See cases [RCV000140974] Chr10:127664168..133622588 [GRCh38]
Chr10:129462432..135436092 [GRCh37]
Chr10:129352422..135286082 [NCBI36]
Chr10:10q26.2-26.3		 likely pathogenic
GRCh38/hg38 10q26.3(chr10:130619775-131684528)x3 copy number gain See cases [RCV000140785] Chr10:130619775..131684528 [GRCh38]
Chr10:132418039..133516864 [GRCh37]
Chr10:132308029..133366854 [NCBI36]
Chr10:10q26.3		 uncertain significance
GRCh38/hg38 10q26.11-26.3(chr10:119707856-133613639)x3 copy number gain See cases [RCV000142005] Chr10:119707856..133613639 [GRCh38]
Chr10:121467368..135427143 [GRCh37]
Chr10:121457358..135277133 [NCBI36]
Chr10:10q26.11-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:121588992-133620674)x1 copy number loss See cases [RCV000142441] Chr10:121588992..133620674 [GRCh38]
Chr10:123348506..135434178 [GRCh37]
Chr10:123338496..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:121918547-133620674)x1 copy number loss See cases [RCV000142737] Chr10:121918547..133620674 [GRCh38]
Chr10:123678062..135434178 [GRCh37]
Chr10:123668052..135284168 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:127435985-133622588)x1 copy number loss See cases [RCV000143241] Chr10:127435985..133622588 [GRCh38]
Chr10:129234249..135436092 [GRCh37]
Chr10:129124239..135286082 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123986772-133613639)x1 copy number loss See cases [RCV000143623] Chr10:123986772..133613639 [GRCh38]
Chr10:125746288..135427143 [GRCh37]
Chr10:125736278..135277133 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.13-26.3(chr10:123576393-133613639)x1 copy number loss See cases [RCV000143544] Chr10:123576393..133613639 [GRCh38]
Chr10:125335909..135427143 [GRCh37]
Chr10:125325899..135277133 [NCBI36]
Chr10:10q26.13-26.3		 pathogenic
GRCh38/hg38 10q26.3(chr10:130625650-133613639)x1 copy number loss See cases [RCV000143554] Chr10:130625650..133613639 [GRCh38]
Chr10:132423914..135427143 [GRCh37]
Chr10:132313904..135277133 [NCBI36]
Chr10:10q26.3		 uncertain significance
GRCh38/hg38 10q26.2-26.3(chr10:126794646-133613639)x1 copy number loss See cases [RCV000143615] Chr10:126794646..133613639 [GRCh38]
Chr10:128483215..135427143 [GRCh37]
Chr10:128473205..135277133 [NCBI36]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:123731209-135353867)x1 copy number loss See cases [RCV000203440] Chr10:123731209..135353867 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic|likely pathogenic
GRCh37/hg19 10q26.3(chr10:132547998-133057358)x3 copy number gain Premature ovarian failure [RCV000225136] Chr10:132547998..133057358 [GRCh37]
Chr10:10q26.3		 benign
GRCh37/hg19 10q24.32-26.3(chr10:103288313-135512075)x3 copy number gain See cases [RCV000240457] Chr10:103288313..135512075 [GRCh37]
Chr10:10q24.32-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122125760-135062972)x3 copy number gain See cases [RCV000449169] Chr10:122125760..135062972 [GRCh37]
Chr10:10q26.12-26.3		 likely pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:124147428-135370736)x1 copy number loss See cases [RCV000449336] Chr10:124147428..135370736 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q24.32-26.3(chr10:104633712-135427143)x3 copy number gain See cases [RCV000449386] Chr10:104633712..135427143 [GRCh37]
Chr10:10q24.32-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122343861-135427143)x1 copy number loss See cases [RCV000446095] Chr10:122343861..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q24.2-26.3(chr10:100780957-135427143)x3 copy number gain See cases [RCV000446733] Chr10:100780957..135427143 [GRCh37]
Chr10:10q24.2-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:132680218-133177546)x3 copy number gain See cases [RCV000446538] Chr10:132680218..133177546 [GRCh37]
Chr10:10q26.3		 likely benign
GRCh37/hg19 10q26.2-26.3(chr10:128465436-135427143)x1 copy number loss See cases [RCV000447132] Chr10:128465436..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:132468363-135367666)x1 copy number loss See cases [RCV000446777] Chr10:132468363..135367666 [GRCh37]
Chr10:10q26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:93297-135378918)x3 copy number gain See cases [RCV000448750] Chr10:93297..135378918 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:132354150-135427143)x3 copy number gain See cases [RCV000510589] Chr10:132354150..135427143 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.2-26.3(chr10:129825453-135427143)x1 copy number loss See cases [RCV000511570] Chr10:129825453..135427143 [GRCh37]
Chr10:10q26.2-26.3		 likely pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:127658004-135427143)x1 copy number loss See cases [RCV000511813] Chr10:127658004..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143) copy number gain See cases [RCV000511389] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic|uncertain significance
GRCh37/hg19 10q25.1-26.3(chr10:106003533-135427143)x3 copy number gain See cases [RCV000510813] Chr10:106003533..135427143 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:132393752-133524273)x3 copy number gain See cases [RCV000511243] Chr10:132393752..133524273 [GRCh37]
Chr10:10q26.3		 likely benign
GRCh37/hg19 10q23.32-26.3(chr10:93283493-135427143)x3 copy number gain See cases [RCV000510972] Chr10:93283493..135427143 [GRCh37]
Chr10:10q23.32-26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:100027-135427143)x3 copy number gain See cases [RCV000510861] Chr10:100027..135427143 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:130693843-134772865)x1 copy number loss See cases [RCV000511280] Chr10:130693843..134772865 [GRCh37]
Chr10:10q26.3		 likely pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:129007673-135427143)x3 copy number gain See cases [RCV000512398] Chr10:129007673..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q11.21-26.3(chr10:42347406-135534747)x1 copy number loss Poly (ADP-Ribose) polymerase inhibitor response [RCV000626438] Chr10:42347406..135534747 [GRCh37]
Chr10:10q11.21-26.3		 drug response
GRCh37/hg19 10q26.12-26.3(chr10:122509781-135427143)x1 copy number loss not provided [RCV000683287] Chr10:122509781..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:127375792-135427143)x1 copy number loss not provided [RCV000683283] Chr10:127375792..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:123019239-135427143)x1 copy number loss not provided [RCV000683286] Chr10:123019239..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:125450893-135427143)x1 copy number loss not provided [RCV000683285] Chr10:125450893..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.11-26.3(chr10:121269222-135427143)x3 copy number gain not provided [RCV000683288] Chr10:121269222..135427143 [GRCh37]
Chr10:10q26.11-26.3		 pathogenic
GRCh37/hg19 10q24.33-26.3(chr10:105613040-135427143)x3 copy number gain not provided [RCV000683290] Chr10:105613040..135427143 [GRCh37]
Chr10:10q24.33-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:131949020-135427143)x1 copy number loss not provided [RCV000683274] Chr10:131949020..135427143 [GRCh37]
Chr10:10q26.3		 pathogenic
GRCh37/hg19 10q23.33-26.3(chr10:94346520-135427143)x3 copy number gain not provided [RCV000683291] Chr10:94346520..135427143 [GRCh37]
Chr10:10q23.33-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122443197-135477883)x1 copy number loss not provided [RCV000737305] Chr10:122443197..135477883 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:129454892-135447971)x1 copy number loss not provided [RCV000737323] Chr10:129454892..135447971 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10p15.3-q26.3(chr10:98087-135477883)x3 copy number gain not provided [RCV000749465] Chr10:98087..135477883 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:132645033-133729749)x1 copy number loss not provided [RCV000749848] Chr10:132645033..133729749 [GRCh37]
Chr10:10q26.3		 benign
GRCh37/hg19 10q26.3(chr10:132908210-132912702)x0 copy number loss not provided [RCV000749850] Chr10:132908210..132912702 [GRCh37]
Chr10:10q26.3		 benign
GRCh37/hg19 10q26.3(chr10:132909934-132928542)x1 copy number loss not provided [RCV000749851] Chr10:132909934..132928542 [GRCh37]
Chr10:10q26.3		 benign
GRCh37/hg19 10q26.3(chr10:132985051-132989502)x0 copy number loss not provided [RCV000749852] Chr10:132985051..132989502 [GRCh37]
Chr10:10q26.3		 benign
GRCh37/hg19 10q26.3(chr10:132988418-132990234)x0 copy number loss not provided [RCV000749853] Chr10:132988418..132990234 [GRCh37]
Chr10:10q26.3		 benign
GRCh37/hg19 10p15.3-q26.3(chr10:73232-135524321)x3 copy number gain not provided [RCV000749464] Chr10:73232..135524321 [GRCh37]
Chr10:10p15.3-q26.3		 pathogenic
NM_174937.4(TCERG1L):c.608C>G (p.Ser203Cys) single nucleotide variant not provided [RCV000963273] Chr10:131308273 [GRCh38]
Chr10:133106536 [GRCh37]
Chr10:10q26.3		 likely benign
NM_174937.4(TCERG1L):c.1305G>A (p.Glu435=) single nucleotide variant not provided [RCV000925191] Chr10:131116889 [GRCh38]
Chr10:132915152 [GRCh37]
Chr10:10q26.3		 likely benign
NM_174937.4(TCERG1L):c.856+9G>A single nucleotide variant not provided [RCV000922388] Chr10:131260250 [GRCh38]
Chr10:133058513 [GRCh37]
Chr10:10q26.3		 likely benign
NM_174937.4(TCERG1L):c.729C>T (p.Ala243=) single nucleotide variant not provided [RCV000967184] Chr10:131260386 [GRCh38]
Chr10:133058649 [GRCh37]
Chr10:10q26.3		 benign|likely benign
GRCh37/hg19 10q25.1-26.3(chr10:110022170-135439095) copy number gain not provided [RCV000767665] Chr10:110022170..135439095 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:124988334-135427143)x3 copy number gain not provided [RCV000848791] Chr10:124988334..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:129009772-135427143)x1 copy number loss not provided [RCV001006362] Chr10:129009772..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
NM_174937.4(TCERG1L):c.1407T>A (p.Phe469Leu) single nucleotide variant Inborn genetic diseases [RCV003288901] Chr10:131104343 [GRCh38]
Chr10:132902606 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.799C>T (p.Arg267Cys) single nucleotide variant Inborn genetic diseases [RCV003249472] Chr10:131260316 [GRCh38]
Chr10:133058579 [GRCh37]
Chr10:10q26.3		 likely benign
NM_174937.4(TCERG1L):c.1721G>A (p.Arg574Gln) single nucleotide variant not provided [RCV000951114] Chr10:131093202 [GRCh38]
Chr10:132891465 [GRCh37]
Chr10:10q26.3		 likely benign
GRCh37/hg19 10q26.2-26.3(chr10:129381095-135427143)x1 copy number loss not provided [RCV001006364] Chr10:129381095..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:131759691-133023235)x3 copy number gain not provided [RCV001006367] Chr10:131759691..133023235 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.11-26.3(chr10:119996339-135427143)x3 copy number gain not provided [RCV001006356] Chr10:119996339..135427143 [GRCh37]
Chr10:10q26.11-26.3		 pathogenic
GRCh37/hg19 10q25.3-26.3(chr10:118247181-135435319)x3 copy number gain not provided [RCV001537903] Chr10:118247181..135435319 [GRCh37]
Chr10:10q25.3-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:129031265-135427143)x1 copy number loss not provided [RCV001259085] Chr10:129031265..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:129483682-135434178) copy number loss Global developmental delay [RCV001352664] Chr10:129483682..135434178 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
Single allele deletion Distal 10q deletion syndrome [RCV001391670] Chr10:127548166..135440251 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122785023-135457222)x1 copy number loss See cases [RCV001526488] Chr10:122785023..135457222 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:129605105-135427143)x1 copy number loss See cases [RCV002285041] Chr10:129605105..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
NM_174937.4(TCERG1L):c.1357C>T (p.Arg453Cys) single nucleotide variant Inborn genetic diseases [RCV003241747] Chr10:131116837 [GRCh38]
Chr10:132915100 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.12-26.3(chr10:122125760-135062972) copy number gain not specified [RCV002052894] Chr10:122125760..135062972 [GRCh37]
Chr10:10q26.12-26.3		 likely pathogenic
GRCh37/hg19 10q26.12-26.3(chr10:122343861-135427143) copy number loss not specified [RCV002052895] Chr10:122343861..135427143 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:128465436-135427143) copy number loss not specified [RCV002052902] Chr10:128465436..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:129914228-135427143) copy number loss not specified [RCV002052908] Chr10:129914228..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q25.1-26.3(chr10:108455687-135427143) copy number gain not specified [RCV002052891] Chr10:108455687..135427143 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
NM_174937.4(TCERG1L):c.901A>T (p.Met301Leu) single nucleotide variant Inborn genetic diseases [RCV003295723] Chr10:131166841 [GRCh38]
Chr10:132965104 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.448A>G (p.Ile150Val) single nucleotide variant Inborn genetic diseases [RCV003295902] Chr10:131309194 [GRCh38]
Chr10:133107457 [GRCh37]
Chr10:10q26.3		 likely benign
GRCh37/hg19 10q26.13-26.3(chr10:126914469-135427143)x1 copy number loss See cases [RCV002292397] Chr10:126914469..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:127198625-135427143)x3 copy number gain See cases [RCV002292400] Chr10:127198625..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
NM_174937.4(TCERG1L):c.1647G>C (p.Gln549His) single nucleotide variant Inborn genetic diseases [RCV003264600] Chr10:131093276 [GRCh38]
Chr10:132891539 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.3(chr10:132844200-132899703)x1 copy number loss not provided [RCV002472800] Chr10:132844200..132899703 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.2-26.3(chr10:130043370-135345340)x1 copy number loss not provided [RCV002473957] Chr10:130043370..135345340 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:126662496-133985966)x3 copy number gain not provided [RCV002474692] Chr10:126662496..133985966 [GRCh37]
Chr10:10q26.13-26.3		 uncertain significance
GRCh37/hg19 10q26.3(chr10:132631529-135354972)x1 copy number loss not provided [RCV002475809] Chr10:132631529..135354972 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1356G>C (p.Glu452Asp) single nucleotide variant Inborn genetic diseases [RCV002879834] Chr10:131116838 [GRCh38]
Chr10:132915101 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1655G>A (p.Arg552Gln) single nucleotide variant Inborn genetic diseases [RCV002972930] Chr10:131093268 [GRCh38]
Chr10:132891531 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.323T>C (p.Phe108Ser) single nucleotide variant Inborn genetic diseases [RCV002993355] Chr10:131311313 [GRCh38]
Chr10:133109576 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.223C>T (p.Pro75Ser) single nucleotide variant Inborn genetic diseases [RCV002733707] Chr10:131311413 [GRCh38]
Chr10:133109676 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1322C>T (p.Thr441Met) single nucleotide variant Inborn genetic diseases [RCV002687315] Chr10:131116872 [GRCh38]
Chr10:132915135 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1331C>T (p.Pro444Leu) single nucleotide variant Inborn genetic diseases [RCV002980881] Chr10:131116863 [GRCh38]
Chr10:132915126 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1139A>G (p.Asn380Ser) single nucleotide variant Inborn genetic diseases [RCV002762115] Chr10:131146556 [GRCh38]
Chr10:132944819 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.916A>C (p.Lys306Gln) single nucleotide variant Inborn genetic diseases [RCV003001436] Chr10:131166826 [GRCh38]
Chr10:132965089 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.803A>C (p.His268Pro) single nucleotide variant Inborn genetic diseases [RCV002854606] Chr10:131260312 [GRCh38]
Chr10:133058575 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.528G>T (p.Trp176Cys) single nucleotide variant Inborn genetic diseases [RCV002893647] Chr10:131308353 [GRCh38]
Chr10:133106616 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1640G>A (p.Arg547Gln) single nucleotide variant Inborn genetic diseases [RCV002708586] Chr10:131093283 [GRCh38]
Chr10:132891546 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.887G>A (p.Arg296His) single nucleotide variant Inborn genetic diseases [RCV002641665] Chr10:131166855 [GRCh38]
Chr10:132965118 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.742A>G (p.Met248Val) single nucleotide variant Inborn genetic diseases [RCV002709516] Chr10:131260373 [GRCh38]
Chr10:133058636 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.482A>T (p.Asn161Ile) single nucleotide variant Inborn genetic diseases [RCV002713354] Chr10:131309160 [GRCh38]
Chr10:133107423 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.199C>G (p.Pro67Ala) single nucleotide variant Inborn genetic diseases [RCV002743704] Chr10:131311437 [GRCh38]
Chr10:133109700 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.509T>C (p.Phe170Ser) single nucleotide variant Inborn genetic diseases [RCV002788487] Chr10:131308372 [GRCh38]
Chr10:133106635 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.721G>A (p.Ala241Thr) single nucleotide variant Inborn genetic diseases [RCV002964434] Chr10:131260394 [GRCh38]
Chr10:133058657 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.730G>A (p.Ala244Thr) single nucleotide variant Inborn genetic diseases [RCV002921467] Chr10:131260385 [GRCh38]
Chr10:133058648 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1525T>C (p.Tyr509His) single nucleotide variant Inborn genetic diseases [RCV002897740] Chr10:131098385 [GRCh38]
Chr10:132896648 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.247C>G (p.Pro83Ala) single nucleotide variant Inborn genetic diseases [RCV002964911] Chr10:131311389 [GRCh38]
Chr10:133109652 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.37C>A (p.Gln13Lys) single nucleotide variant Inborn genetic diseases [RCV003211870] Chr10:131311599 [GRCh38]
Chr10:133109862 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.1421A>G (p.Lys474Arg) single nucleotide variant Inborn genetic diseases [RCV003183154] Chr10:131104329 [GRCh38]
Chr10:132902592 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.12-26.3(chr10:122610933-135439810)x1 copy number loss not provided [RCV003222684] Chr10:122610933..135439810 [GRCh37]
Chr10:10q26.12-26.3		 pathogenic
NM_174937.4(TCERG1L):c.766C>T (p.Leu256Phe) single nucleotide variant Inborn genetic diseases [RCV003206727] Chr10:131260349 [GRCh38]
Chr10:133058612 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.81G>C (p.Trp27Cys) single nucleotide variant Inborn genetic diseases [RCV003183582] Chr10:131311555 [GRCh38]
Chr10:133109818 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.956C>T (p.Pro319Leu) single nucleotide variant Inborn genetic diseases [RCV003184924] Chr10:131163200 [GRCh38]
Chr10:132961463 [GRCh37]
Chr10:10q26.3		 uncertain significance
NM_174937.4(TCERG1L):c.788G>C (p.Ser263Thr) single nucleotide variant Inborn genetic diseases [RCV003284962] Chr10:131260327 [GRCh38]
Chr10:133058590 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.13-26.3(chr10:123477898-135427143) copy number loss Distal 10q deletion syndrome [RCV003319590] Chr10:123477898..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10p14-q26.3(chr10:11138692-135427143) copy number gain Distal trisomy 10q [RCV003319593] Chr10:11138692..135427143 [GRCh37]
Chr10:10p14-q26.3		 pathogenic
GRCh37/hg19 10p13-q26.3(chr10:12829206-135427143) copy number loss Distal 10q deletion syndrome [RCV003319583] Chr10:12829206..135427143 [GRCh37]
Chr10:10p13-q26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:124895517-135440296)x1 copy number loss Distal 10q deletion syndrome [RCV003329543] Chr10:124895517..135440296 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
NM_174937.4(TCERG1L):c.1061G>A (p.Arg354Gln) single nucleotide variant Inborn genetic diseases [RCV003363205] Chr10:131146634 [GRCh38]
Chr10:132944897 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q25.1-26.3(chr10:111447991-133435388)x3 copy number gain not provided [RCV003484817] Chr10:111447991..133435388 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:132852693-134505024)x3 copy number gain not provided [RCV003484824] Chr10:132852693..134505024 [GRCh37]
Chr10:10q26.3		 uncertain significance
GRCh37/hg19 10q26.2-26.3(chr10:128925940-135427143)x1 copy number loss not provided [RCV003483108] Chr10:128925940..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q25.1-26.3(chr10:111378692-135427143)x3 copy number gain Distal trisomy 10q [RCV003458955] Chr10:111378692..135427143 [GRCh37]
Chr10:10q25.1-26.3		 pathogenic
GRCh37/hg19 10q26.2-26.3(chr10:128289206-135427143)x1 copy number loss Distal 10q deletion syndrome [RCV003458182] Chr10:128289206..135427143 [GRCh37]
Chr10:10q26.2-26.3		 pathogenic
GRCh38/hg38 10q26.2-26.3(chr10:125976998-133427130)x1 copy number loss Duane syndrome type 1 [RCV003984306] Chr10:125976998..133427130 [GRCh38]
Chr10:10q26.2-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:131398569-135427143)x1 copy number loss not specified [RCV003986883] Chr10:131398569..135427143 [GRCh37]
Chr10:10q26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:125987494-135427143)x1 copy number loss not specified [RCV003986904] Chr10:125987494..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q26.13-26.3(chr10:126127397-135427143)x1 copy number loss not specified [RCV003986878] Chr10:126127397..135427143 [GRCh37]
Chr10:10q26.13-26.3		 pathogenic
GRCh37/hg19 10q23.33-26.3(chr10:95078198-135427143)x3 copy number gain not specified [RCV003986893] Chr10:95078198..135427143 [GRCh37]
Chr10:10q23.33-26.3		 pathogenic
GRCh37/hg19 10q26.3(chr10:131299771-135441274)x1 copy number loss not provided [RCV003885450] Chr10:131299771..135441274 [GRCh37]
Chr10:10q26.3		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:480
Count of miRNA genes:396
Interacting mature miRNAs:432
Transcripts:ENST00000368642, ENST00000483040
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH76735  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710132,893,773 - 132,893,996UniSTSGRCh37
GRCh37994,910,326 - 94,910,544UniSTSGRCh37
Build 36993,950,147 - 93,950,365RGDNCBI36
Celera10126,564,558 - 126,564,781UniSTS
Celera965,346,619 - 65,346,837RGD
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map10q26.3UniSTS
HuRef10126,468,576 - 126,468,799UniSTS
HuRef964,588,259 - 64,588,477UniSTS
RH102879  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710132,890,717 - 132,890,902UniSTSGRCh37
Build 3610132,780,707 - 132,780,892RGDNCBI36
Celera10126,561,502 - 126,561,687RGD
Cytogenetic Map10q26.3UniSTS
HuRef10126,465,520 - 126,465,705UniSTS
GeneMap99-GB4 RH Map10557.8UniSTS
SHGC-81985  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710133,108,739 - 133,109,010UniSTSGRCh37
Build 3610132,998,729 - 132,999,000RGDNCBI36
Celera10126,777,134 - 126,777,405RGD
Cytogenetic Map10q26.3UniSTS
HuRef10126,681,461 - 126,681,732UniSTS
SHGC-107424  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710132,934,008 - 132,934,108UniSTSGRCh37
Build 3610132,823,998 - 132,824,098RGDNCBI36
Celera10126,604,730 - 126,604,830RGD
Cytogenetic Map10q26.3UniSTS
HuRef10126,508,595 - 126,508,695UniSTS
SHGC-147201  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710132,924,945 - 132,925,261UniSTSGRCh37
Build 3610132,814,935 - 132,815,251RGDNCBI36
Celera10126,595,666 - 126,595,982RGD
Cytogenetic Map10q26.3UniSTS
HuRef10126,499,531 - 126,499,847UniSTS
D10S1155  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3710133,055,107 - 133,055,439UniSTSGRCh37
Build 3610132,945,097 - 132,945,429RGDNCBI36
Celera10126,723,878 - 126,724,210RGD
Cytogenetic Map10q26.3UniSTS
HuRef10126,627,850 - 126,628,178UniSTS
D1S1423  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map10p12.1-p11.2UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map6p22.3-p21.32UniSTS
Cytogenetic Map6q22.33UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map7q11.2UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map9q12UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map18q22.1UniSTS
Cytogenetic Map13q12UniSTS
Cytogenetic Map10p14-p13UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map11q23-q24UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map22cen-q12.3UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map4q28UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map1q41-q42UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map1p13.1UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map11q24.1UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3q13UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map8p23-p22UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map3q26UniSTS
Cytogenetic Map9p21.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic MapXq27.2UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map12q14.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map20q11.21-q11.23UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map21p11.1UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map12q24.31-q24.32UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map13q33.3UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map4p15.31UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map20q13.1UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map4q26UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map4q24UniSTS
Cytogenetic Map1p32UniSTS
Cytogenetic Map3p21.1-p14.2UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic MapXq13-q21UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map16p13.13UniSTS
Cytogenetic Map10pter-q25.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map11q13.1-q13.3UniSTS
Cytogenetic Map16p13UniSTS
Cytogenetic Map15q26UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map4p15.1-p14UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map7q32.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map9p13UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q25.3UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map3q21-q24UniSTS
Cytogenetic Map4q13UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map8q24.12UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map10q24.2UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map6q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map20pter-p12UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map7p14.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map18p11.22UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map14q22.2UniSTS
Cytogenetic Map20p11.22-p11.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map10p11.21UniSTS
Cytogenetic Map6p22-p21UniSTS
Cytogenetic Map17q21.1-q21.3UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2-p12.3UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map5q22.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map4p15.3UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map12q13.1-q13.2UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map6q22.32UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16p12.1UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map10q22.3-q23.2UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map3q12.1UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map2p13.2UniSTS
Cytogenetic Map3p12.3UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map3q11.2UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map6p24.2UniSTS
Cytogenetic Map20q13.33UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 536 1 1 1 4 11 270 1 36 565
Low 19 18 609 19 95 5 961 10 1949 33 806 220 16 49 509 2
Below cutoff 1607 1174 286 290 797 170 1750 993 1316 181 415 497 124 1 711 1203

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000368642   ⟹   ENSP00000357631
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10131,092,391 - 131,311,721 (-)Ensembl
RefSeq Acc Id: ENST00000483040
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl10131,092,391 - 131,260,336 (-)Ensembl
RefSeq Acc Id: NM_174937   ⟹   NP_777597
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810131,092,391 - 131,311,721 (-)NCBI
GRCh3710132,890,655 - 133,109,984 (-)RGD
Build 3610132,780,645 - 132,999,974 (-)NCBI Archive
Celera10126,561,440 - 126,778,379 (-)RGD
HuRef10126,465,458 - 126,680,284 (-)ENTREZGENE
CHM1_110133,171,642 - 133,388,645 (-)NCBI
T2T-CHM13v2.010132,027,431 - 132,247,342 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047424966   ⟹   XP_047280922
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810131,092,391 - 131,311,721 (-)NCBI
RefSeq Acc Id: XM_047424967   ⟹   XP_047280923
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810131,258,969 - 131,311,721 (-)NCBI
RefSeq Acc Id: XM_054365420   ⟹   XP_054221395
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010132,027,431 - 132,247,342 (-)NCBI
RefSeq Acc Id: XM_054365421   ⟹   XP_054221396
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.010132,193,926 - 132,247,342 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_777597   ⟸   NM_174937
- UniProtKB: Q5VWI2 (UniProtKB/Swiss-Prot),   Q86XM8 (UniProtKB/Swiss-Prot),   Q5VWI1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000357631   ⟸   ENST00000368642
RefSeq Acc Id: XP_047280922   ⟸   XM_047424966
- Peptide Label: isoform X1
RefSeq Acc Id: XP_047280923   ⟸   XM_047424967
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054221395   ⟸   XM_054365420
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054221396   ⟸   XM_054365421
- Peptide Label: isoform X2
Protein Domains
FF   WW

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5VWI1-F1-model_v2 AlphaFold Q5VWI1 1-586 view protein structure

Promoters
RGD ID:7219011
Promoter ID:EPDNEW_H15251
Type:initiation region
Name:TCERG1L_1
Description:transcription elongation regulator 1 like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3810131,311,752 - 131,311,812EPDNEW
RGD ID:6787624
Promoter ID:HG_KWN:11679
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:ENST00000368643
Position:
Human AssemblyChrPosition (strand)Source
Build 3610133,000,251 - 133,000,751 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:23533 AgrOrtholog
COSMIC TCERG1L COSMIC
Ensembl Genes ENSG00000176769 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000368642 ENTREZGENE
  ENST00000368642.4 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.10.440 UniProtKB/Swiss-Prot
  2.20.70.10 UniProtKB/Swiss-Prot
GTEx ENSG00000176769 GTEx
HGNC ID HGNC:23533 ENTREZGENE
Human Proteome Map TCERG1L Human Proteome Map
InterPro FF_domain UniProtKB/Swiss-Prot
  FF_domain_sf UniProtKB/Swiss-Prot
  TCRG1-like UniProtKB/Swiss-Prot
  WW_dom UniProtKB/Swiss-Prot
  WW_dom_sf UniProtKB/Swiss-Prot
KEGG Report hsa:256536 UniProtKB/Swiss-Prot
NCBI Gene 256536 ENTREZGENE
OMIM 620498 OMIM
PANTHER PTHR15377 UniProtKB/Swiss-Prot
  TRANSCRIPTION ELONGATION REGULATOR 1-LIKE PROTEIN UniProtKB/Swiss-Prot
Pfam PF01846 UniProtKB/Swiss-Prot
PharmGKB PA134864258 PharmGKB
PROSITE PS51676 UniProtKB/Swiss-Prot
  WW_DOMAIN_1 UniProtKB/Swiss-Prot
  WW_DOMAIN_2 UniProtKB/Swiss-Prot
SMART SM00441 UniProtKB/Swiss-Prot
  SM00456 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF51045 UniProtKB/Swiss-Prot
  SSF81698 UniProtKB/Swiss-Prot
UniProt Q5VWI1 ENTREZGENE
  Q5VWI2 ENTREZGENE
  Q86XM8 ENTREZGENE
  TCRGL_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q5VWI2 UniProtKB/Swiss-Prot
  Q86XM8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-08 TCERG1L  transcription elongation regulator 1 like    transcription elongation regulator 1-like  Symbol and/or name change 5135510 APPROVED