NR2E1 (nuclear receptor subfamily 2 group E member 1) - Rat Genome Database

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Gene: NR2E1 (nuclear receptor subfamily 2 group E member 1) Homo sapiens
Analyze
Symbol: NR2E1
Name: nuclear receptor subfamily 2 group E member 1
RGD ID: 1346337
HGNC Page HGNC:7973
Description: Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in cell differentiation and negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within several processes, including forebrain development; regulation of neural precursor cell proliferation; and regulation of neuron differentiation. Predicted to be located in nucleoplasm. Predicted to be part of chromatin.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: hTll; nuclear receptor subfamily 2, group E, member 1; nuclear receptor TLX; tailes-related receptor; tailless; tailless homolog; TLL; TLX; XTLL
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386108,166,022 - 108,188,809 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6108,166,022 - 108,188,805 (+)EnsemblGRCh38hg38GRCh38
GRCh376108,487,226 - 108,510,013 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366108,593,955 - 108,616,706 (+)NCBINCBI36Build 36hg18NCBI36
Build 346108,593,954 - 108,616,704NCBI
Celera6109,233,715 - 109,256,507 (+)NCBICelera
Cytogenetic Map6q21NCBI
HuRef6106,055,461 - 106,078,257 (+)NCBIHuRef
CHM1_16108,750,188 - 108,772,994 (+)NCBICHM1_1
T2T-CHM13v2.06109,343,129 - 109,365,912 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
aggressive behavior  (IEA,ISO)
amygdala development  (IEA,ISO)
angiogenesis  (IEA,ISO)
anterior commissure morphogenesis  (IEA,ISO)
apoptotic process  (IEA,ISO)
astrocyte cell migration  (IEA,ISO)
astrocyte differentiation  (IEA,ISO)
behavioral fear response  (IEA,ISO)
brain development  (IEA,ISO)
camera-type eye development  (IEA,ISO)
cell differentiation  (IBA,IEA)
cell fate commitment  (IEA,ISO)
cell population proliferation  (IEA,ISO)
cerebral cortex development  (IEA,ISO)
cerebral cortex neuron differentiation  (IEA,ISO)
dentate gyrus development  (IEA,ISO)
extracellular matrix organization  (IEA,ISO)
forebrain generation of neurons  (IEA,ISO)
intracellular receptor signaling pathway  (IEA)
layer formation in cerebral cortex  (IEA,ISO)
long-term synaptic potentiation  (IEA,ISO)
negative regulation of apoptotic process  (IEA,ISO)
negative regulation of astrocyte differentiation  (IEA,ISO)
negative regulation of neural precursor cell proliferation  (IEA,ISO)
negative regulation of neuron differentiation  (IEA,ISO)
negative regulation of transcription by RNA polymerase II  (IBA,IEA,ISO)
nervous system development  (TAS)
neural precursor cell proliferation  (IEA,ISO)
neuroblast proliferation  (IEA,ISO)
neuron differentiation  (IEA,ISO)
olfactory bulb development  (IEA,ISO)
positive regulation of angiogenesis  (IEA,ISO)
positive regulation of cell cycle  (IEA,ISO)
positive regulation of cell population proliferation  (IEA,ISO)
positive regulation of neural precursor cell proliferation  (IEA,ISO)
positive regulation of neuroblast proliferation  (IEA,ISO)
positive regulation of stem cell proliferation  (IEA)
positive regulation of transcription by RNA polymerase II  (IEA)
regulation of cell migration involved in sprouting angiogenesis  (IEA,ISO)
regulation of cellular component organization  (IEA,ISO)
regulation of dendrite morphogenesis  (IEA,ISO)
regulation of DNA-templated transcription  (IEA)
regulation of timing of neuron differentiation  (IEA,ISO)
retina development in camera-type eye  (IEA,ISO)
social behavior  (IEA,ISO)
somatic stem cell population maintenance  (IEA,ISO)
steroid hormone mediated signaling pathway  (IEA)
visual perception  (IEA,ISO)

Cellular Component
chromatin  (ISA)
nucleoplasm  (IEA,TAS)
nucleus  (IEA)

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:2570372   PMID:8047143   PMID:9628820   PMID:11073974   PMID:12079282   PMID:12477932   PMID:14574404   PMID:15123239   PMID:15489334   PMID:16000615   PMID:16344560   PMID:16481466  
PMID:17054721   PMID:17655765   PMID:17873065   PMID:18205168   PMID:18391013   PMID:19058789   PMID:19274049   PMID:19555662   PMID:20360385   PMID:20599619   PMID:20814749   PMID:21135096  
PMID:21368052   PMID:21873635   PMID:21957244   PMID:22290436   PMID:22675500   PMID:23028043   PMID:23213277   PMID:23510989   PMID:23975195   PMID:24952347   PMID:25327364   PMID:25328137  
PMID:25356871   PMID:25557355   PMID:25691470   PMID:25813674   PMID:26059414   PMID:26186194   PMID:26280373   PMID:26554934   PMID:26838672   PMID:26965827   PMID:27048878   PMID:27890558  
PMID:28420882   PMID:28473536   PMID:28514442   PMID:29844126   PMID:32721119   PMID:32805587   PMID:33858847   PMID:33961781   PMID:34463725   PMID:35932893   PMID:36321378   PMID:36688959  


Genomics

Comparative Map Data
NR2E1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386108,166,022 - 108,188,809 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6108,166,022 - 108,188,805 (+)EnsemblGRCh38hg38GRCh38
GRCh376108,487,226 - 108,510,013 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366108,593,955 - 108,616,706 (+)NCBINCBI36Build 36hg18NCBI36
Build 346108,593,954 - 108,616,704NCBI
Celera6109,233,715 - 109,256,507 (+)NCBICelera
Cytogenetic Map6q21NCBI
HuRef6106,055,461 - 106,078,257 (+)NCBIHuRef
CHM1_16108,750,188 - 108,772,994 (+)NCBICHM1_1
T2T-CHM13v2.06109,343,129 - 109,365,912 (+)NCBIT2T-CHM13v2.0
Nr2e1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391042,437,959 - 42,459,721 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1042,437,959 - 42,459,628 (-)EnsemblGRCm39 Ensembl
GRCm381042,561,963 - 42,583,590 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1042,561,963 - 42,583,632 (-)EnsemblGRCm38mm10GRCm38
MGSCv371042,281,777 - 42,303,394 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361042,250,386 - 42,272,003 (-)NCBIMGSCv36mm8
Celera1043,429,189 - 43,451,223 (-)NCBICelera
Cytogenetic Map10B2NCBI
cM Map1022.89NCBI
Nr2e1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82047,632,347 - 47,653,464 (-)NCBIGRCr8
mRatBN7.22046,050,134 - 46,071,257 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2046,050,414 - 46,073,949 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2047,768,851 - 47,787,997 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02047,419,014 - 47,438,160 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02048,112,098 - 48,131,217 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02047,286,843 - 47,306,318 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2047,288,137 - 47,306,318 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02048,956,022 - 48,976,460 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2053,902,230 - 53,921,543 (+)NCBICelera
Cytogenetic Map20q13NCBI
Nr2e1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541133,303,655 - 33,325,376 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541133,303,765 - 33,325,221 (+)NCBIChiLan1.0ChiLan1.0
NR2E1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25128,171,722 - 128,193,827 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16126,061,903 - 126,084,022 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06105,965,478 - 105,988,213 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16109,830,458 - 109,852,779 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6109,831,223 - 109,851,436 (+)Ensemblpanpan1.1panPan2
NR2E1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11265,209,177 - 65,230,274 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1265,209,542 - 65,228,998 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1265,025,508 - 65,046,090 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01266,085,435 - 66,106,030 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1266,084,897 - 66,143,020 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11265,440,929 - 65,461,512 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01265,287,358 - 65,307,930 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01265,560,068 - 65,580,649 (+)NCBIUU_Cfam_GSD_1.0
Nr2e1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946100,157,644 - 100,178,191 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365644,432,485 - 4,453,486 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365644,432,556 - 4,453,056 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR2E1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl174,271,042 - 74,292,681 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1174,266,667 - 74,292,686 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2183,451,928 - 83,562,972 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NR2E1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11365,663,495 - 65,686,510 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1365,664,826 - 65,685,807 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604037,989,706 - 38,012,780 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nr2e1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478014,098,360 - 14,119,772 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478014,098,144 - 14,119,791 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NR2E1
11 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_003269.4(NR2E1):c.821G>A (p.Arg274Gln) single nucleotide variant Malignant melanoma [RCV000061291] Chr6:108180888 [GRCh38]
Chr6:108502092 [GRCh37]
Chr6:108608785 [NCBI36]
Chr6:6q21
not provided
GRCh38/hg38 6q16.3-21(chr6:102356502-111049879)x1 copy number loss See cases [RCV000134806] Chr6:102356502..111049879 [GRCh38]
Chr6:102804377..111371082 [GRCh37]
Chr6:102911070..111477775 [NCBI36]
Chr6:6q16.3-21
pathogenic
GRCh38/hg38 6q21-22.1(chr6:107370141-115827482)x1 copy number loss See cases [RCV000138006] Chr6:107370141..115827482 [GRCh38]
Chr6:107691345..116148646 [GRCh37]
Chr6:107798038..116255339 [NCBI36]
Chr6:6q21-22.1
pathogenic
GRCh38/hg38 6q13-24.1(chr6:74382807-142040500)x3 copy number gain See cases [RCV000139729] Chr6:74382807..142040500 [GRCh38]
Chr6:75092523..142361637 [GRCh37]
Chr6:75149243..142403330 [NCBI36]
Chr6:6q13-24.1
pathogenic
GRCh38/hg38 6q16.1-22.31(chr6:96609994-122161548)x1 copy number loss See cases [RCV000139465] Chr6:96609994..122161548 [GRCh38]
Chr6:97057870..122482694 [GRCh37]
Chr6:97164591..122524393 [NCBI36]
Chr6:6q16.1-22.31
pathogenic
GRCh38/hg38 6q21(chr6:107445281-110547907)x1 copy number loss See cases [RCV000141382] Chr6:107445281..110547907 [GRCh38]
Chr6:107766485..110869110 [GRCh37]
Chr6:107873178..110975803 [NCBI36]
Chr6:6q21
pathogenic
GRCh38/hg38 6q21-22.31(chr6:106503719-125781219)x1 copy number loss See cases [RCV000141587] Chr6:106503719..125781219 [GRCh38]
Chr6:106951594..126102365 [GRCh37]
Chr6:107058287..126144058 [NCBI36]
Chr6:6q21-22.31
pathogenic
GRCh38/hg38 6q16.3-21(chr6:103279465-113934239)x1 copy number loss See cases [RCV000142287] Chr6:103279465..113934239 [GRCh38]
Chr6:103727340..114255403 [GRCh37]
Chr6:103834033..114362096 [NCBI36]
Chr6:6q16.3-21
pathogenic
GRCh38/hg38 6q16.3-22.31(chr6:100054889-120488154)x1 copy number loss See cases [RCV000143227] Chr6:100054889..120488154 [GRCh38]
Chr6:100502765..120809300 [GRCh37]
Chr6:100609486..120850999 [NCBI36]
Chr6:6q16.3-22.31
pathogenic
GRCh37/hg19 6q21(chr6:108278386-108831557)x3 copy number gain See cases [RCV000240339] Chr6:108278386..108831557 [GRCh37]
Chr6:6q21
uncertain significance
GRCh37/hg19 6q21(chr6:107446437-108543388)x3 copy number gain See cases [RCV000446442] Chr6:107446437..108543388 [GRCh37]
Chr6:6q21
uncertain significance
GRCh37/hg19 6q14.3-22.31(chr6:85988428-120548687)x1 copy number loss See cases [RCV000445666] Chr6:85988428..120548687 [GRCh37]
Chr6:6q14.3-22.31
pathogenic
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3 copy number gain See cases [RCV000512067] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27
pathogenic
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482) copy number gain See cases [RCV000510595] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27
pathogenic
GRCh37/hg19 6q16.1-21(chr6:97384446-110247755)x1 copy number loss See cases [RCV000510703] Chr6:97384446..110247755 [GRCh37]
Chr6:6q16.1-21
pathogenic
GRCh37/hg19 6q16.1-21(chr6:94202605-109878834)x1 copy number loss See cases [RCV000512470] Chr6:94202605..109878834 [GRCh37]
Chr6:6q16.1-21
pathogenic
GRCh37/hg19 6q16.1-22.1(chr6:95549951-116684929)x1 copy number loss not provided [RCV000682693] Chr6:95549951..116684929 [GRCh37]
Chr6:6q16.1-22.1
pathogenic
GRCh37/hg19 6q21(chr6:108325097-108908760)x1 copy number loss not provided [RCV000682706] Chr6:108325097..108908760 [GRCh37]
Chr6:6q21
uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3 copy number gain not provided [RCV000745400] Chr6:60107..171054786 [GRCh37]
Chr6:6p25.3-q27
pathogenic
GRCh37/hg19 6p25.3-q27(chr6:165632-170919470)x3 copy number gain not provided [RCV000745404] Chr6:165632..170919470 [GRCh37]
Chr6:6p25.3-q27
pathogenic
GRCh37/hg19 6p25.3-q27(chr6:108666-170980171)x3 copy number gain not provided [RCV000745403] Chr6:108666..170980171 [GRCh37]
Chr6:6p25.3-q27
pathogenic
GRCh37/hg19 6q16.3-22.1(chr6:101296547-117004249)x3 copy number gain Microcephaly [RCV001251053] Chr6:101296547..117004249 [GRCh37]
Chr6:6q16.3-22.1
pathogenic
GRCh37/hg19 6q16.1-21(chr6:98949950-114533905)x1 copy number loss Deletion 6q16 q21 [RCV001263224] Chr6:98949950..114533905 [GRCh37]
Chr6:6q16.1-21
pathogenic
GRCh37/hg19 6q21(chr6:107446437-108543388) copy number gain not specified [RCV002053607] Chr6:107446437..108543388 [GRCh37]
Chr6:6q21
uncertain significance
GRCh37/hg19 6q14.3-22.31(chr6:85988428-120548687) copy number loss not specified [RCV002053595] Chr6:85988428..120548687 [GRCh37]
Chr6:6q14.3-22.31
pathogenic
GRCh37/hg19 6q15-22.2(chr6:92054891-118329651) copy number loss not specified [RCV002053598] Chr6:92054891..118329651 [GRCh37]
Chr6:6q15-22.2
pathogenic
NC_000006.11:g.(?_107019871)_(110266416_?)del deletion Charcot-Marie-Tooth disease type 4 [RCV003116781]|not provided [RCV003116782] Chr6:107019871..110266416 [GRCh37]
Chr6:6q21
pathogenic|uncertain significance|no classifications from unflagged records
NM_003269.5(NR2E1):c.937G>A (p.Ala313Thr) single nucleotide variant Inborn genetic diseases [RCV003280842] Chr6:108181593 [GRCh38]
Chr6:108502797 [GRCh37]
Chr6:6q21
uncertain significance
GRCh37/hg19 6q21(chr6:108189941-108498389)x3 copy number gain not provided [RCV002473781] Chr6:108189941..108498389 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.393C>G (p.Phe131Leu) single nucleotide variant Inborn genetic diseases [RCV002905083] Chr6:108176636 [GRCh38]
Chr6:108497840 [GRCh37]
Chr6:6q21
uncertain significance
GRCh37/hg19 6q21(chr6:108195840-108498389)x3 copy number gain not provided [RCV002475554] Chr6:108195840..108498389 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.874G>A (p.Val292Ile) single nucleotide variant Inborn genetic diseases [RCV002737083] Chr6:108180941 [GRCh38]
Chr6:108502145 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.406C>G (p.Gln136Glu) single nucleotide variant Inborn genetic diseases [RCV002872961] Chr6:108176649 [GRCh38]
Chr6:108497853 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.785T>C (p.Ile262Thr) single nucleotide variant Inborn genetic diseases [RCV002921788] Chr6:108180852 [GRCh38]
Chr6:108502056 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.1003A>G (p.Thr335Ala) single nucleotide variant Inborn genetic diseases [RCV003281195] Chr6:108187308 [GRCh38]
Chr6:108508512 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.364T>C (p.Ser122Pro) single nucleotide variant Inborn genetic diseases [RCV003183771] Chr6:108176607 [GRCh38]
Chr6:108497811 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.971C>T (p.Thr324Met) single nucleotide variant Inborn genetic diseases [RCV003220710] Chr6:108181627 [GRCh38]
Chr6:108502831 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.768G>C (p.Gln256His) single nucleotide variant Inborn genetic diseases [RCV003193694] Chr6:108180835 [GRCh38]
Chr6:108502039 [GRCh37]
Chr6:6q21
uncertain significance
NM_003269.5(NR2E1):c.169C>G (p.Gln57Glu) single nucleotide variant Inborn genetic diseases [RCV003345528] Chr6:108171601 [GRCh38]
Chr6:108492805 [GRCh37]
Chr6:6q21
uncertain significance
GRCh37/hg19 6q15-21(chr6:92468126-109410569)x1 copy number loss not provided [RCV003482928] Chr6:92468126..109410569 [GRCh37]
Chr6:6q15-21
pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1606
Count of miRNA genes:683
Interacting mature miRNAs:759
Transcripts:ENST00000368983, ENST00000368986, ENST00000426403, ENST00000484978
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D6S1594  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,509,641 - 108,509,774UniSTSGRCh37
Build 366108,616,334 - 108,616,467RGDNCBI36
Celera6109,256,135 - 109,256,268RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,885 - 106,078,018UniSTS
Marshfield Genetic Map6117.29RGD
Marshfield Genetic Map6117.29UniSTS
Genethon Genetic Map6117.3UniSTS
TNG Radiation Hybrid Map652300.0UniSTS
GeneMap99-GB4 RH Map6466.71UniSTS
Whitehead-YAC Contig Map6 UniSTS
RH46630  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,793 - 108,508,967UniSTSGRCh37
Build 366108,615,486 - 108,615,660RGDNCBI36
Celera6109,255,287 - 109,255,461RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,037 - 106,077,211UniSTS
GeneMap99-GB4 RH Map6459.92UniSTS
NCBI RH Map61404.5UniSTS
NR2E1_2053  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,509,144 - 108,510,029UniSTSGRCh37
Build 366108,615,837 - 108,616,722RGDNCBI36
Celera6109,255,638 - 109,256,523RGD
HuRef6106,077,388 - 106,078,273UniSTS
ECD01053  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,494,568 - 108,495,447UniSTSGRCh37
Build 366108,601,261 - 108,602,140RGDNCBI36
Celera6109,241,068 - 109,241,947RGD
Cytogenetic Map6q21UniSTS
HuRef6106,062,814 - 106,063,693UniSTS
ECD01312  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,492,711 - 108,493,580UniSTSGRCh37
Build 366108,599,404 - 108,600,273RGDNCBI36
Celera6109,239,211 - 109,240,080RGD
Cytogenetic Map6q21UniSTS
HuRef6106,060,957 - 106,061,826UniSTS
ECD01345  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,495,513 - 108,496,381UniSTSGRCh37
Build 366108,602,206 - 108,603,074RGDNCBI36
Celera6109,242,013 - 109,242,881RGD
Cytogenetic Map6q21UniSTS
HuRef6106,063,759 - 106,064,627UniSTS
ECD01522  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,496,514 - 108,497,376UniSTSGRCh37
Build 366108,603,207 - 108,604,069RGDNCBI36
Celera6109,243,014 - 109,243,876RGD
Cytogenetic Map6q21UniSTS
HuRef6106,064,760 - 106,065,622UniSTS
ECD01610  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,493,614 - 108,494,473UniSTSGRCh37
Build 366108,600,307 - 108,601,166RGDNCBI36
Celera6109,240,114 - 109,240,973RGD
Cytogenetic Map6q21UniSTS
HuRef6106,061,860 - 106,062,719UniSTS
ECD04940  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,500,802 - 108,501,551UniSTSGRCh37
Build 366108,607,495 - 108,608,244RGDNCBI36
Celera6109,247,300 - 109,248,049RGD
Cytogenetic Map6q21UniSTS
HuRef6106,069,050 - 106,069,799UniSTS
ECD05160  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,501,585 - 108,502,328UniSTSGRCh37
Build 366108,608,278 - 108,609,021RGDNCBI36
Celera6109,248,083 - 109,248,826RGD
Cytogenetic Map6q21UniSTS
HuRef6106,069,833 - 106,070,576UniSTS
ECD05760  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,489,459 - 108,490,186UniSTSGRCh37
Build 366108,596,152 - 108,596,879RGDNCBI36
Celera6109,235,959 - 109,236,686RGD
Cytogenetic Map6q21UniSTS
HuRef6106,057,705 - 106,058,432UniSTS
ECD05899  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,484 - 108,509,207UniSTSGRCh37
Build 366108,615,177 - 108,615,900RGDNCBI36
Celera6109,254,978 - 109,255,701RGD
Cytogenetic Map6q21UniSTS
HuRef6106,076,728 - 106,077,451UniSTS
ECD06037  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,485,591 - 108,486,310UniSTSGRCh37
Build 366108,592,284 - 108,593,003RGDNCBI36
Celera6109,232,091 - 109,232,810RGD
Cytogenetic Map6q21UniSTS
HuRef6106,053,837 - 106,054,556UniSTS
ECD06189  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,488,731 - 108,489,446UniSTSGRCh37
Build 366108,595,424 - 108,596,139RGDNCBI36
Celera6109,235,231 - 109,235,946RGD
Cytogenetic Map6q21UniSTS
HuRef6106,056,977 - 106,057,692UniSTS
ECD06364  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,048 - 108,491,758UniSTSGRCh37
Build 366108,597,741 - 108,598,451RGDNCBI36
Celera6109,237,548 - 109,238,258RGD
Cytogenetic Map6q21UniSTS
HuRef6106,059,294 - 106,060,004UniSTS
ECD06482  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,490,268 - 108,490,975UniSTSGRCh37
Build 366108,596,961 - 108,597,668RGDNCBI36
Celera6109,236,768 - 109,237,475RGD
Cytogenetic Map6q21UniSTS
HuRef6106,058,514 - 106,059,221UniSTS
ECD06561  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,846 - 108,492,551UniSTSGRCh37
Build 366108,598,539 - 108,599,244RGDNCBI36
Celera6109,238,346 - 109,239,051RGD
Cytogenetic Map6q21UniSTS
HuRef6106,060,092 - 106,060,797UniSTS
ECD06748  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,498,296 - 108,498,996UniSTSGRCh37
Build 366108,604,989 - 108,605,689RGDNCBI36
Celera6109,244,794 - 109,245,494RGD
Cytogenetic Map6q21UniSTS
HuRef6106,066,540 - 106,067,240UniSTS
ECD06842  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,486,351 - 108,487,048UniSTSGRCh37
Build 366108,593,044 - 108,593,741RGDNCBI36
Celera6109,232,851 - 109,233,548RGD
Cytogenetic Map6q21UniSTS
HuRef6106,054,597 - 106,055,294UniSTS
ECD07002  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,487,983 - 108,488,676UniSTSGRCh37
Build 366108,594,676 - 108,595,369RGDNCBI36
Celera6109,234,483 - 109,235,176RGD
Cytogenetic Map6q21UniSTS
HuRef6106,056,229 - 106,056,922UniSTS
ECD07468  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,507,603 - 108,508,283UniSTSGRCh37
Build 366108,614,296 - 108,614,976RGDNCBI36
Celera6109,254,097 - 109,254,777RGD
Cytogenetic Map6q21UniSTS
HuRef6106,075,847 - 106,076,527UniSTS
ECD08149  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,499,021 - 108,499,683UniSTSGRCh37
Build 366108,605,714 - 108,606,376RGDNCBI36
Celera6109,245,519 - 109,246,181RGD
Cytogenetic Map6q21UniSTS
HuRef6106,067,265 - 106,067,927UniSTS
ECD09532  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,506,961 - 108,507,587UniSTSGRCh37
Build 366108,613,654 - 108,614,280RGDNCBI36
Celera6109,253,459 - 109,254,081RGD
Cytogenetic Map6q21UniSTS
HuRef6106,075,205 - 106,075,831UniSTS
ECD09913  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,487,187 - 108,487,803UniSTSGRCh37
Build 366108,593,880 - 108,594,496RGDNCBI36
Celera6109,233,687 - 109,234,303RGD
Cytogenetic Map6q21UniSTS
HuRef6106,055,433 - 106,056,049UniSTS
ECD10783  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,499,826 - 108,500,417UniSTSGRCh37
Build 366108,606,519 - 108,607,110RGDNCBI36
Celera6109,246,324 - 109,246,915RGD
Cytogenetic Map6q21UniSTS
HuRef6106,068,070 - 106,068,661UniSTS
ECD12191  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,505,451 - 108,506,001UniSTSGRCh37
GRCh376108,505,451 - 108,506,000UniSTSGRCh37
Build 366108,612,144 - 108,612,693RGDNCBI36
Celera6109,251,949 - 109,252,498RGD
Celera6109,251,949 - 109,252,499UniSTS
Cytogenetic Map6q21UniSTS
HuRef6106,073,699 - 106,074,249UniSTS
HuRef6106,073,700 - 106,074,249UniSTS
ECD13087  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,497,584 - 108,498,110UniSTSGRCh37
Build 366108,604,277 - 108,604,803RGDNCBI36
Celera6109,244,084 - 109,244,608RGD
Cytogenetic Map6q21UniSTS
HuRef6106,065,830 - 106,066,354UniSTS
ECD14174  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,506,037 - 108,506,536UniSTSGRCh37
Build 366108,612,730 - 108,613,229RGDNCBI36
Celera6109,252,535 - 109,253,034RGD
Cytogenetic Map6q21UniSTS
HuRef6106,074,285 - 106,074,784UniSTS
ECD14486  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,603 - 108,505,095UniSTSGRCh37
Build 366108,611,296 - 108,611,788RGDNCBI36
Celera6109,251,101 - 109,251,593RGD
Cytogenetic Map6q21UniSTS
HuRef6106,072,851 - 106,073,343UniSTS
ECD16321  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,502,697 - 108,503,142UniSTSGRCh37
Build 366108,609,390 - 108,609,835RGDNCBI36
Celera6109,249,195 - 109,249,640RGD
Cytogenetic Map6q21UniSTS
HuRef6106,070,945 - 106,071,390UniSTS
ECD18313  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,509,317 - 108,509,681UniSTSGRCh37
Build 366108,616,010 - 108,616,374RGDNCBI36
Celera6109,255,811 - 109,256,175RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,561 - 106,077,925UniSTS
ECD22712  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,209 - 108,504,419UniSTSGRCh37
Build 366108,610,902 - 108,611,112RGDNCBI36
Celera6109,250,707 - 109,250,917RGD
Cytogenetic Map6q21UniSTS
HuRef6106,072,457 - 106,072,667UniSTS
REN49703  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,485,264 - 108,485,515UniSTSGRCh37
Build 366108,591,957 - 108,592,208RGDNCBI36
Celera6109,231,764 - 109,232,015RGD
Cytogenetic Map6q21UniSTS
HuRef6106,053,510 - 106,053,761UniSTS
REN49704  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,485,506 - 108,485,773UniSTSGRCh37
Build 366108,592,199 - 108,592,466RGDNCBI36
Celera6109,232,006 - 109,232,273RGD
Cytogenetic Map6q21UniSTS
HuRef6106,053,752 - 106,054,019UniSTS
REN49705  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,485,762 - 108,486,014UniSTSGRCh37
Build 366108,592,455 - 108,592,707RGDNCBI36
Celera6109,232,262 - 109,232,514RGD
Cytogenetic Map6q21UniSTS
HuRef6106,054,008 - 106,054,260UniSTS
REN49706  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,485,920 - 108,486,175UniSTSGRCh37
Build 366108,592,613 - 108,592,868RGDNCBI36
Celera6109,232,420 - 109,232,675RGD
Cytogenetic Map6q21UniSTS
HuRef6106,054,166 - 106,054,421UniSTS
REN49707  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,486,146 - 108,486,373UniSTSGRCh37
Build 366108,592,839 - 108,593,066RGDNCBI36
Celera6109,232,646 - 109,232,873RGD
Cytogenetic Map6q21UniSTS
HuRef6106,054,392 - 106,054,619UniSTS
REN49708  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,486,247 - 108,486,500UniSTSGRCh37
Build 366108,592,940 - 108,593,193RGDNCBI36
Celera6109,232,747 - 109,233,000RGD
Cytogenetic Map6q21UniSTS
HuRef6106,054,493 - 106,054,746UniSTS
REN49709  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,486,471 - 108,486,721UniSTSGRCh37
Build 366108,593,164 - 108,593,414RGDNCBI36
Celera6109,232,971 - 109,233,221RGD
Cytogenetic Map6q21UniSTS
HuRef6106,054,717 - 106,054,967UniSTS
REN49710  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,486,701 - 108,486,942UniSTSGRCh37
Build 366108,593,394 - 108,593,635RGDNCBI36
Celera6109,233,201 - 109,233,442RGD
Cytogenetic Map6q21UniSTS
HuRef6106,054,947 - 106,055,188UniSTS
REN49711  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,486,880 - 108,487,127UniSTSGRCh37
Build 366108,593,573 - 108,593,820RGDNCBI36
Celera6109,233,380 - 109,233,627RGD
Cytogenetic Map6q21UniSTS
HuRef6106,055,126 - 106,055,373UniSTS
REN49712  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,487,103 - 108,487,333UniSTSGRCh37
Build 366108,593,796 - 108,594,026RGDNCBI36
Celera6109,233,603 - 109,233,833RGD
Cytogenetic Map6q21UniSTS
HuRef6106,055,349 - 106,055,579UniSTS
REN49713  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,487,313 - 108,487,567UniSTSGRCh37
Build 366108,594,006 - 108,594,260RGDNCBI36
Celera6109,233,813 - 109,234,067RGD
Cytogenetic Map6q21UniSTS
HuRef6106,055,559 - 106,055,813UniSTS
REN49714  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,487,550 - 108,487,798UniSTSGRCh37
Build 366108,594,243 - 108,594,491RGDNCBI36
Celera6109,234,050 - 109,234,298RGD
Cytogenetic Map6q21UniSTS
HuRef6106,055,796 - 106,056,044UniSTS
REN49715  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,487,775 - 108,488,007UniSTSGRCh37
Build 366108,594,468 - 108,594,700RGDNCBI36
Celera6109,234,275 - 109,234,507RGD
Cytogenetic Map6q21UniSTS
HuRef6106,056,021 - 106,056,253UniSTS
REN49716  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,487,981 - 108,488,236UniSTSGRCh37
Build 366108,594,674 - 108,594,929RGDNCBI36
Celera6109,234,481 - 109,234,736RGD
Cytogenetic Map6q21UniSTS
HuRef6106,056,227 - 106,056,482UniSTS
REN49717  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,488,219 - 108,488,468UniSTSGRCh37
Build 366108,594,912 - 108,595,161RGDNCBI36
Celera6109,234,719 - 109,234,968RGD
Cytogenetic Map6q21UniSTS
HuRef6106,056,465 - 106,056,714UniSTS
REN49718  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,488,425 - 108,488,670UniSTSGRCh37
Build 366108,595,118 - 108,595,363RGDNCBI36
Celera6109,234,925 - 109,235,170RGD
Cytogenetic Map6q21UniSTS
HuRef6106,056,671 - 106,056,916UniSTS
REN49719  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,488,647 - 108,488,914UniSTSGRCh37
Build 366108,595,340 - 108,595,607RGDNCBI36
Celera6109,235,147 - 109,235,414RGD
Cytogenetic Map6q21UniSTS
HuRef6106,056,893 - 106,057,160UniSTS
REN49720  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,488,895 - 108,489,120UniSTSGRCh37
Build 366108,595,588 - 108,595,813RGDNCBI36
Celera6109,235,395 - 109,235,620RGD
Cytogenetic Map6q21UniSTS
HuRef6106,057,141 - 106,057,366UniSTS
REN49721  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,489,074 - 108,489,328UniSTSGRCh37
Build 366108,595,767 - 108,596,021RGDNCBI36
Celera6109,235,574 - 109,235,828RGD
Cytogenetic Map6q21UniSTS
HuRef6106,057,320 - 106,057,574UniSTS
REN49722  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,489,303 - 108,489,553UniSTSGRCh37
Build 366108,595,996 - 108,596,246RGDNCBI36
Celera6109,235,803 - 109,236,053RGD
Cytogenetic Map6q21UniSTS
HuRef6106,057,549 - 106,057,799UniSTS
REN49723  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,489,530 - 108,489,771UniSTSGRCh37
Build 366108,596,223 - 108,596,464RGDNCBI36
Celera6109,236,030 - 109,236,271RGD
Cytogenetic Map6q21UniSTS
HuRef6106,057,776 - 106,058,017UniSTS
REN49724  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,489,748 - 108,489,995UniSTSGRCh37
Build 366108,596,441 - 108,596,688RGDNCBI36
Celera6109,236,248 - 109,236,495RGD
Cytogenetic Map6q21UniSTS
HuRef6106,057,994 - 106,058,241UniSTS
REN49725  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,489,969 - 108,490,230UniSTSGRCh37
Build 366108,596,662 - 108,596,923RGDNCBI36
Celera6109,236,469 - 109,236,730RGD
Cytogenetic Map6q21UniSTS
HuRef6106,058,215 - 106,058,476UniSTS
REN49726  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,490,203 - 108,490,445UniSTSGRCh37
Build 366108,596,896 - 108,597,138RGDNCBI36
Celera6109,236,703 - 109,236,945RGD
Cytogenetic Map6q21UniSTS
HuRef6106,058,449 - 106,058,691UniSTS
REN49727  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,490,421 - 108,490,686UniSTSGRCh37
Build 366108,597,114 - 108,597,379RGDNCBI36
Celera6109,236,921 - 109,237,186RGD
Cytogenetic Map6q21UniSTS
HuRef6106,058,667 - 106,058,932UniSTS
REN49728  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,490,664 - 108,490,917UniSTSGRCh37
Build 366108,597,357 - 108,597,610RGDNCBI36
Celera6109,237,164 - 109,237,417RGD
Cytogenetic Map6q21UniSTS
HuRef6106,058,910 - 106,059,163UniSTS
REN49729  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,490,895 - 108,491,131UniSTSGRCh37
Build 366108,597,588 - 108,597,824RGDNCBI36
Celera6109,237,395 - 109,237,631RGD
Cytogenetic Map6q21UniSTS
HuRef6106,059,141 - 106,059,377UniSTS
REN49730  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,081 - 108,491,328UniSTSGRCh37
Build 366108,597,774 - 108,598,021RGDNCBI36
Celera6109,237,581 - 109,237,828RGD
Cytogenetic Map6q21UniSTS
HuRef6106,059,327 - 106,059,574UniSTS
REN49731  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,319 - 108,491,574UniSTSGRCh37
Build 366108,598,012 - 108,598,267RGDNCBI36
Celera6109,237,819 - 109,238,074RGD
Cytogenetic Map6q21UniSTS
HuRef6106,059,565 - 106,059,820UniSTS
REN49732  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,547 - 108,491,796UniSTSGRCh37
Build 366108,598,240 - 108,598,489RGDNCBI36
Celera6109,238,047 - 109,238,296RGD
Cytogenetic Map6q21UniSTS
HuRef6106,059,793 - 106,060,042UniSTS
REN49733  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,770 - 108,492,014UniSTSGRCh37
Build 366108,598,463 - 108,598,707RGDNCBI36
Celera6109,238,270 - 109,238,514RGD
Cytogenetic Map6q21UniSTS
HuRef6106,060,016 - 106,060,260UniSTS
REN49734  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,991 - 108,492,229UniSTSGRCh37
Build 366108,598,684 - 108,598,922RGDNCBI36
Celera6109,238,491 - 109,238,729RGD
Cytogenetic Map6q21UniSTS
HuRef6106,060,237 - 106,060,475UniSTS
REN49735  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,492,173 - 108,492,441UniSTSGRCh37
Build 366108,598,866 - 108,599,134RGDNCBI36
Celera6109,238,673 - 109,238,941RGD
Cytogenetic Map6q21UniSTS
HuRef6106,060,419 - 106,060,687UniSTS
REN49736  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,492,428 - 108,492,677UniSTSGRCh37
Build 366108,599,121 - 108,599,370RGDNCBI36
Celera6109,238,928 - 109,239,177RGD
Cytogenetic Map6q21UniSTS
HuRef6106,060,674 - 106,060,923UniSTS
REN49737  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,492,665 - 108,492,903UniSTSGRCh37
Build 366108,599,358 - 108,599,596RGDNCBI36
Celera6109,239,165 - 109,239,403RGD
Cytogenetic Map6q21UniSTS
HuRef6106,060,911 - 106,061,149UniSTS
REN49738  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,492,881 - 108,493,146UniSTSGRCh37
Build 366108,599,574 - 108,599,839RGDNCBI36
Celera6109,239,381 - 109,239,646RGD
Cytogenetic Map6q21UniSTS
HuRef6106,061,127 - 106,061,392UniSTS
REN49739  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,493,123 - 108,493,382UniSTSGRCh37
Build 366108,599,816 - 108,600,075RGDNCBI36
Celera6109,239,623 - 109,239,882RGD
Cytogenetic Map6q21UniSTS
HuRef6106,061,369 - 106,061,628UniSTS
REN49740  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,493,353 - 108,493,598UniSTSGRCh37
Build 366108,600,046 - 108,600,291RGDNCBI36
Celera6109,239,853 - 109,240,098RGD
Cytogenetic Map6q21UniSTS
HuRef6106,061,599 - 106,061,844UniSTS
REN49741  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,493,597 - 108,493,845UniSTSGRCh37
Build 366108,600,290 - 108,600,538RGDNCBI36
Celera6109,240,097 - 109,240,345RGD
Cytogenetic Map6q21UniSTS
HuRef6106,061,843 - 106,062,091UniSTS
REN49742  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,493,825 - 108,494,096UniSTSGRCh37
Build 366108,600,518 - 108,600,789RGDNCBI36
Celera6109,240,325 - 109,240,596RGD
Cytogenetic Map6q21UniSTS
HuRef6106,062,071 - 106,062,342UniSTS
REN49743  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,494,093 - 108,494,317UniSTSGRCh37
Build 366108,600,786 - 108,601,010RGDNCBI36
Celera6109,240,593 - 109,240,817RGD
Cytogenetic Map6q21UniSTS
HuRef6106,062,339 - 106,062,563UniSTS
REN49744  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,494,294 - 108,494,518UniSTSGRCh37
Build 366108,600,987 - 108,601,211RGDNCBI36
Celera6109,240,794 - 109,241,018RGD
Cytogenetic Map6q21UniSTS
HuRef6106,062,540 - 106,062,764UniSTS
REN49745  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,494,484 - 108,494,717UniSTSGRCh37
Build 366108,601,177 - 108,601,410RGDNCBI36
Celera6109,240,984 - 109,241,217RGD
Cytogenetic Map6q21UniSTS
HuRef6106,062,730 - 106,062,963UniSTS
REN49746  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,494,694 - 108,494,963UniSTSGRCh37
Build 366108,601,387 - 108,601,656RGDNCBI36
Celera6109,241,194 - 109,241,463RGD
Cytogenetic Map6q21UniSTS
HuRef6106,062,940 - 106,063,209UniSTS
REN49747  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,494,924 - 108,495,148UniSTSGRCh37
Build 366108,601,617 - 108,601,841RGDNCBI36
Celera6109,241,424 - 109,241,648RGD
Cytogenetic Map6q21UniSTS
HuRef6106,063,170 - 106,063,394UniSTS
REN49748  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,495,117 - 108,495,352UniSTSGRCh37
Build 366108,601,810 - 108,602,045RGDNCBI36
Celera6109,241,617 - 109,241,852RGD
Cytogenetic Map6q21UniSTS
HuRef6106,063,363 - 106,063,598UniSTS
REN49749  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,495,329 - 108,495,569UniSTSGRCh37
Build 366108,602,022 - 108,602,262RGDNCBI36
Celera6109,241,829 - 109,242,069RGD
Cytogenetic Map6q21UniSTS
HuRef6106,063,575 - 106,063,815UniSTS
REN49750  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,495,546 - 108,495,786UniSTSGRCh37
Build 366108,602,239 - 108,602,479RGDNCBI36
Celera6109,242,046 - 109,242,286RGD
Cytogenetic Map6q21UniSTS
HuRef6106,063,792 - 106,064,032UniSTS
REN49751  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,495,768 - 108,496,037UniSTSGRCh37
Build 366108,602,461 - 108,602,730RGDNCBI36
Celera6109,242,268 - 109,242,537RGD
Cytogenetic Map6q21UniSTS
HuRef6106,064,014 - 106,064,283UniSTS
REN49752  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,496,015 - 108,496,253UniSTSGRCh37
Build 366108,602,708 - 108,602,946RGDNCBI36
Celera6109,242,515 - 109,242,753RGD
Cytogenetic Map6q21UniSTS
HuRef6106,064,261 - 106,064,499UniSTS
REN49753  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,496,233 - 108,496,459UniSTSGRCh37
Build 366108,602,926 - 108,603,152RGDNCBI36
Celera6109,242,733 - 109,242,959RGD
Cytogenetic Map6q21UniSTS
HuRef6106,064,479 - 106,064,705UniSTS
REN49754  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,496,445 - 108,496,697UniSTSGRCh37
Build 366108,603,138 - 108,603,390RGDNCBI36
Celera6109,242,945 - 109,243,197RGD
Cytogenetic Map6q21UniSTS
HuRef6106,064,691 - 106,064,943UniSTS
REN49755  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,496,658 - 108,496,895UniSTSGRCh37
Build 366108,603,351 - 108,603,588RGDNCBI36
Celera6109,243,158 - 109,243,395RGD
Cytogenetic Map6q21UniSTS
HuRef6106,064,904 - 106,065,141UniSTS
REN49756  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,496,875 - 108,497,118UniSTSGRCh37
Build 366108,603,568 - 108,603,811RGDNCBI36
Celera6109,243,375 - 109,243,618RGD
Cytogenetic Map6q21UniSTS
HuRef6106,065,121 - 106,065,364UniSTS
REN49757  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,497,096 - 108,497,365UniSTSGRCh37
Build 366108,603,789 - 108,604,058RGDNCBI36
Celera6109,243,596 - 109,243,865RGD
Cytogenetic Map6q21UniSTS
HuRef6106,065,342 - 106,065,611UniSTS
REN49758  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,497,341 - 108,497,585UniSTSGRCh37
Build 366108,604,034 - 108,604,278RGDNCBI36
Celera6109,243,841 - 109,244,085RGD
Cytogenetic Map6q21UniSTS
HuRef6106,065,587 - 106,065,831UniSTS
REN49759  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,497,563 - 108,497,790UniSTSGRCh37
Build 366108,604,256 - 108,604,483RGDNCBI36
Celera6109,244,063 - 109,244,290RGD
Cytogenetic Map6q21UniSTS
HuRef6106,065,809 - 106,066,036UniSTS
REN49760  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,497,770 - 108,498,023UniSTSGRCh37
Build 366108,604,463 - 108,604,716RGDNCBI36
Cytogenetic Map6q21UniSTS
REN49761  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,498,002 - 108,498,258UniSTSGRCh37
Build 366108,604,695 - 108,604,951RGDNCBI36
REN49762  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,498,235 - 108,498,495UniSTSGRCh37
Build 366108,604,928 - 108,605,188RGDNCBI36
Celera6109,244,733 - 109,244,993RGD
Cytogenetic Map6q21UniSTS
HuRef6106,066,479 - 106,066,739UniSTS
REN49763  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,498,477 - 108,498,713UniSTSGRCh37
Build 366108,605,170 - 108,605,406RGDNCBI36
Celera6109,244,975 - 109,245,211RGD
Cytogenetic Map6q21UniSTS
HuRef6106,066,721 - 106,066,957UniSTS
REN49764  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,498,696 - 108,498,930UniSTSGRCh37
Build 366108,605,389 - 108,605,623RGDNCBI36
Celera6109,245,194 - 109,245,428RGD
Cytogenetic Map6q21UniSTS
HuRef6106,066,940 - 106,067,174UniSTS
REN49765  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,498,907 - 108,499,177UniSTSGRCh37
Build 366108,605,600 - 108,605,870RGDNCBI36
Celera6109,245,405 - 109,245,675RGD
Cytogenetic Map6q21UniSTS
HuRef6106,067,151 - 106,067,421UniSTS
REN49766  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,499,148 - 108,499,396UniSTSGRCh37
Build 366108,605,841 - 108,606,089RGDNCBI36
Celera6109,245,646 - 109,245,894RGD
Cytogenetic Map6q21UniSTS
HuRef6106,067,392 - 106,067,640UniSTS
REN49767  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,499,386 - 108,499,616UniSTSGRCh37
Build 366108,606,079 - 108,606,309RGDNCBI36
Celera6109,245,884 - 109,246,114RGD
Cytogenetic Map6q21UniSTS
HuRef6106,067,630 - 106,067,860UniSTS
REN49768  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,499,593 - 108,499,851UniSTSGRCh37
Build 366108,606,286 - 108,606,544RGDNCBI36
Celera6109,246,091 - 109,246,349RGD
Cytogenetic Map6q21UniSTS
HuRef6106,067,837 - 106,068,095UniSTS
REN49769  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,499,824 - 108,500,074UniSTSGRCh37
Build 366108,606,517 - 108,606,767RGDNCBI36
Celera6109,246,322 - 109,246,572RGD
Cytogenetic Map6q21UniSTS
HuRef6106,068,068 - 106,068,318UniSTS
REN49770  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,500,036 - 108,500,292UniSTSGRCh37
Build 366108,606,729 - 108,606,985RGDNCBI36
Celera6109,246,534 - 109,246,790RGD
Cytogenetic Map6q21UniSTS
HuRef6106,068,280 - 106,068,536UniSTS
REN49771  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,500,265 - 108,500,499UniSTSGRCh37
Build 366108,606,958 - 108,607,192RGDNCBI36
Celera6109,246,763 - 109,246,997RGD
Cytogenetic Map6q21UniSTS
HuRef6106,068,509 - 106,068,743UniSTS
REN49772  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,500,465 - 108,500,708UniSTSGRCh37
Build 366108,607,158 - 108,607,401RGDNCBI36
Celera6109,246,963 - 109,247,206RGD
Cytogenetic Map6q21UniSTS
HuRef6106,068,709 - 106,068,952UniSTS
REN49773  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,500,683 - 108,500,957UniSTSGRCh37
Build 366108,607,376 - 108,607,650RGDNCBI36
Celera6109,247,181 - 109,247,455RGD
Cytogenetic Map6q21UniSTS
HuRef6106,068,927 - 106,069,205UniSTS
REN49774  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,500,944 - 108,501,189UniSTSGRCh37
Build 366108,607,637 - 108,607,882RGDNCBI36
Celera6109,247,442 - 109,247,687RGD
Cytogenetic Map6q21UniSTS
HuRef6106,069,192 - 106,069,437UniSTS
REN49775  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,501,140 - 108,501,389UniSTSGRCh37
Build 366108,607,833 - 108,608,082RGDNCBI36
Celera6109,247,638 - 109,247,887RGD
Cytogenetic Map6q21UniSTS
HuRef6106,069,388 - 106,069,637UniSTS
REN49776  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,501,375 - 108,501,610UniSTSGRCh37
Build 366108,608,068 - 108,608,303RGDNCBI36
Celera6109,247,873 - 109,248,108RGD
Cytogenetic Map6q21UniSTS
HuRef6106,069,623 - 106,069,858UniSTS
REN49777  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,501,587 - 108,501,817UniSTSGRCh37
Build 366108,608,280 - 108,608,510RGDNCBI36
Celera6109,248,085 - 109,248,315RGD
Cytogenetic Map6q21UniSTS
HuRef6106,069,835 - 106,070,065UniSTS
REN49778  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,501,815 - 108,502,054UniSTSGRCh37
Build 366108,608,508 - 108,608,747RGDNCBI36
Celera6109,248,313 - 109,248,552RGD
Cytogenetic Map6q21UniSTS
HuRef6106,070,063 - 106,070,302UniSTS
REN49779  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,502,034 - 108,502,283UniSTSGRCh37
Build 366108,608,727 - 108,608,976RGDNCBI36
Celera6109,248,532 - 109,248,781RGD
Cytogenetic Map6q21UniSTS
HuRef6106,070,282 - 106,070,531UniSTS
REN49780  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,502,224 - 108,502,467UniSTSGRCh37
Build 366108,608,917 - 108,609,160RGDNCBI36
Celera6109,248,722 - 109,248,965RGD
Cytogenetic Map6q21UniSTS
HuRef6106,070,472 - 106,070,715UniSTS
REN49781  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,502,698 - 108,502,936UniSTSGRCh37
Build 366108,609,391 - 108,609,629RGDNCBI36
Celera6109,249,196 - 109,249,434RGD
Cytogenetic Map6q21UniSTS
HuRef6106,070,946 - 106,071,184UniSTS
REN49782  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,502,886 - 108,503,139UniSTSGRCh37
Build 366108,609,579 - 108,609,832RGDNCBI36
Celera6109,249,384 - 109,249,637RGD
Cytogenetic Map6q21UniSTS
HuRef6106,071,134 - 106,071,387UniSTS
REN49783  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,198 - 108,504,422UniSTSGRCh37
Build 366108,610,891 - 108,611,115RGDNCBI36
Celera6109,250,696 - 109,250,920RGD
Cytogenetic Map6q21UniSTS
HuRef6106,072,446 - 106,072,670UniSTS
REN49784  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,394 - 108,504,663UniSTSGRCh37
Build 366108,611,087 - 108,611,356RGDNCBI36
Celera6109,250,892 - 109,251,161RGD
Cytogenetic Map6q21UniSTS
HuRef6106,072,642 - 106,072,911UniSTS
REN49785  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,639 - 108,504,863UniSTSGRCh37
Build 366108,611,332 - 108,611,556RGDNCBI36
Celera6109,251,137 - 109,251,361RGD
Cytogenetic Map6q21UniSTS
HuRef6106,072,887 - 106,073,111UniSTS
REN49786  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,832 - 108,505,095UniSTSGRCh37
Build 366108,611,525 - 108,611,788RGDNCBI36
Celera6109,251,330 - 109,251,593RGD
Cytogenetic Map6q21UniSTS
HuRef6106,073,080 - 106,073,343UniSTS
REN49787  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,923 - 108,505,178UniSTSGRCh37
Build 366108,611,616 - 108,611,871RGDNCBI36
Celera6109,251,421 - 109,251,676RGD
Cytogenetic Map6q21UniSTS
HuRef6106,073,171 - 106,073,426UniSTS
REN49788  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,505,146 - 108,505,396UniSTSGRCh37
Build 366108,611,839 - 108,612,089RGDNCBI36
Celera6109,251,644 - 109,251,894RGD
Cytogenetic Map6q21UniSTS
HuRef6106,073,394 - 106,073,644UniSTS
REN49789  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,505,368 - 108,505,611UniSTSGRCh37
Build 366108,612,061 - 108,612,304RGDNCBI36
Celera6109,251,866 - 109,252,109RGD
Cytogenetic Map6q21UniSTS
HuRef6106,073,616 - 106,073,859UniSTS
REN49790  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,505,589 - 108,505,838UniSTSGRCh37
Build 366108,612,282 - 108,612,531RGDNCBI36
Celera6109,252,087 - 109,252,336RGD
Cytogenetic Map6q21UniSTS
HuRef6106,073,837 - 106,074,086UniSTS
REN49791  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,505,815 - 108,506,060UniSTSGRCh37
Build 366108,612,508 - 108,612,753RGDNCBI36
Celera6109,252,313 - 109,252,558RGD
Cytogenetic Map6q21UniSTS
HuRef6106,074,063 - 106,074,308UniSTS
REN49792  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,506,037 - 108,506,294UniSTSGRCh37
Build 366108,612,730 - 108,612,987RGDNCBI36
Celera6109,252,535 - 109,252,792RGD
Cytogenetic Map6q21UniSTS
HuRef6106,074,285 - 106,074,542UniSTS
REN49793  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,506,267 - 108,506,533UniSTSGRCh37
Build 366108,612,960 - 108,613,226RGDNCBI36
Celera6109,252,765 - 109,253,031RGD
Cytogenetic Map6q21UniSTS
HuRef6106,074,515 - 106,074,781UniSTS
REN49794  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,506,519 - 108,506,753UniSTSGRCh37
Build 366108,613,212 - 108,613,446RGDNCBI36
Celera6109,253,017 - 109,253,251RGD
Cytogenetic Map6q21UniSTS
HuRef6106,074,767 - 106,074,997UniSTS
REN49795  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,506,725 - 108,506,977UniSTSGRCh37
Build 366108,613,418 - 108,613,670RGDNCBI36
Celera6109,253,223 - 109,253,475RGD
Cytogenetic Map6q21UniSTS
HuRef6106,074,969 - 106,075,221UniSTS
REN49796  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,506,968 - 108,507,225UniSTSGRCh37
Build 366108,613,661 - 108,613,918RGDNCBI36
Celera6109,253,466 - 109,253,723RGD
Cytogenetic Map6q21UniSTS
HuRef6106,075,212 - 106,075,469UniSTS
REN49797  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,507,182 - 108,507,414UniSTSGRCh37
Build 366108,613,875 - 108,614,107RGDNCBI36
Celera6109,253,680 - 109,253,912RGD
Cytogenetic Map6q21UniSTS
HuRef6106,075,426 - 106,075,658UniSTS
REN49798  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,507,371 - 108,507,621UniSTSGRCh37
Build 366108,614,064 - 108,614,314RGDNCBI36
Celera6109,253,869 - 109,254,115RGD
Cytogenetic Map6q21UniSTS
HuRef6106,075,615 - 106,075,865UniSTS
REN49799  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,507,598 - 108,507,848UniSTSGRCh37
Build 366108,614,291 - 108,614,541RGDNCBI36
Celera6109,254,092 - 109,254,342RGD
Cytogenetic Map6q21UniSTS
HuRef6106,075,842 - 106,076,092UniSTS
REN49800  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,507,825 - 108,508,094UniSTSGRCh37
Build 366108,614,518 - 108,614,787RGDNCBI36
Celera6109,254,319 - 109,254,588RGD
Cytogenetic Map6q21UniSTS
HuRef6106,076,069 - 106,076,338UniSTS
REN49801  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,089 - 108,508,337UniSTSGRCh37
Build 366108,614,782 - 108,615,030RGDNCBI36
Celera6109,254,583 - 109,254,831RGD
Cytogenetic Map6q21UniSTS
HuRef6106,076,333 - 106,076,581UniSTS
REN49802  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,309 - 108,508,549UniSTSGRCh37
Build 366108,615,002 - 108,615,242RGDNCBI36
Celera6109,254,803 - 109,255,043RGD
Cytogenetic Map6q21UniSTS
HuRef6106,076,553 - 106,076,793UniSTS
REN49803  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,544 - 108,508,780UniSTSGRCh37
Build 366108,615,237 - 108,615,473RGDNCBI36
Celera6109,255,038 - 109,255,274RGD
Cytogenetic Map6q21UniSTS
HuRef6106,076,788 - 106,077,024UniSTS
REN49804  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,757 - 108,508,996UniSTSGRCh37
Build 366108,615,450 - 108,615,689RGDNCBI36
Celera6109,255,251 - 109,255,490RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,001 - 106,077,240UniSTS
REN49805  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,982 - 108,509,242UniSTSGRCh37
Build 366108,615,675 - 108,615,935RGDNCBI36
Celera6109,255,476 - 109,255,736RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,226 - 106,077,486UniSTS
REN49806  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,509,214 - 108,509,465UniSTSGRCh37
Build 366108,615,907 - 108,616,158RGDNCBI36
Celera6109,255,708 - 109,255,959RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,458 - 106,077,709UniSTS
REN49807  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,509,442 - 108,509,692UniSTSGRCh37
Build 366108,616,135 - 108,616,385RGDNCBI36
Celera6109,255,936 - 109,256,186RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,686 - 106,077,936UniSTS
REN49808  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,509,669 - 108,509,912UniSTSGRCh37
Build 366108,616,362 - 108,616,605RGDNCBI36
Celera6109,256,163 - 109,256,406RGD
Cytogenetic Map6q21UniSTS
HuRef6106,077,913 - 106,078,156UniSTS
REN49809  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,509,907 - 108,510,149UniSTSGRCh37
Build 366108,616,600 - 108,616,842RGDNCBI36
Celera6109,256,401 - 109,256,643RGD
Cytogenetic Map6q21UniSTS
HuRef6106,078,151 - 106,078,393UniSTS
REN49810  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,510,143 - 108,510,417UniSTSGRCh37
Build 366108,616,836 - 108,617,110RGDNCBI36
Celera6109,256,637 - 109,256,911RGD
Cytogenetic Map6q21UniSTS
HuRef6106,078,387 - 106,078,661UniSTS
stSG634165  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,486,291 - 108,487,427UniSTSGRCh37
Build 366108,592,984 - 108,594,120RGDNCBI36
Celera6109,232,791 - 109,233,927RGD
HuRef6106,054,537 - 106,055,673UniSTS
stSG634167  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,488,542 - 108,489,758UniSTSGRCh37
Build 366108,595,235 - 108,596,451RGDNCBI36
Celera6109,235,042 - 109,236,258RGD
HuRef6106,056,788 - 106,058,004UniSTS
stSG634168  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,489,739 - 108,491,086UniSTSGRCh37
Build 366108,596,432 - 108,597,779RGDNCBI36
Celera6109,236,239 - 109,237,586RGD
HuRef6106,057,985 - 106,059,332UniSTS
stSG634169  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,491,086 - 108,492,230UniSTSGRCh37
Build 366108,597,779 - 108,598,923RGDNCBI36
Celera6109,237,586 - 109,238,730RGD
HuRef6106,059,332 - 106,060,476UniSTS
stSG634170  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,492,211 - 108,493,377UniSTSGRCh37
Build 366108,598,904 - 108,600,070RGDNCBI36
Celera6109,238,711 - 109,239,877RGD
HuRef6106,060,457 - 106,061,623UniSTS
stSG634171  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,493,358 - 108,494,380UniSTSGRCh37
Build 366108,600,051 - 108,601,073RGDNCBI36
Celera6109,239,858 - 109,240,880RGD
HuRef6106,061,604 - 106,062,626UniSTS
stSG634172  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,494,367 - 108,495,618UniSTSGRCh37
Build 366108,601,060 - 108,602,311RGDNCBI36
Celera6109,240,867 - 109,242,118RGD
HuRef6106,062,613 - 106,063,864UniSTS
stSG634173  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,495,600 - 108,497,078UniSTSGRCh37
Build 366108,602,293 - 108,603,771RGDNCBI36
Celera6109,242,100 - 109,243,578RGD
HuRef6106,063,846 - 106,065,324UniSTS
stSG634174  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,497,059 - 108,498,447UniSTSGRCh37
Build 366108,603,752 - 108,605,140RGDNCBI36
Celera6109,243,559 - 109,244,945RGD
HuRef6106,065,305 - 106,066,691UniSTS
stSG634175  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,498,428 - 108,499,683UniSTSGRCh37
Build 366108,605,121 - 108,606,376RGDNCBI36
Celera6109,244,926 - 109,246,181RGD
HuRef6106,066,672 - 106,067,927UniSTS
stSG634176  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,499,664 - 108,500,855UniSTSGRCh37
Build 366108,606,357 - 108,607,548RGDNCBI36
Celera6109,246,162 - 109,247,353RGD
HuRef6106,067,908 - 106,069,103UniSTS
stSG634177  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,500,844 - 108,501,024UniSTSGRCh37
Build 366108,607,537 - 108,607,717RGDNCBI36
Celera6109,247,342 - 109,247,522RGD
HuRef6106,069,092 - 106,069,272UniSTS
stSG634178  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,501,027 - 108,502,328UniSTSGRCh37
Build 366108,607,720 - 108,609,021RGDNCBI36
Celera6109,247,525 - 109,248,826RGD
HuRef6106,069,275 - 106,070,576UniSTS
stSG634179  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,502,334 - 108,503,512UniSTSGRCh37
Build 366108,609,027 - 108,610,205RGDNCBI36
Celera6109,248,832 - 109,250,010RGD
HuRef6106,070,582 - 106,071,760UniSTS
stSG634180  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,503,497 - 108,504,829UniSTSGRCh37
Build 366108,610,190 - 108,611,522RGDNCBI36
Celera6109,249,995 - 109,251,327RGD
HuRef6106,071,745 - 106,073,077UniSTS
stSG634181  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,504,810 - 108,505,830UniSTSGRCh37
Build 366108,611,503 - 108,612,523RGDNCBI36
Celera6109,251,308 - 109,252,328RGD
HuRef6106,073,058 - 106,074,078UniSTS
stSG634182  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,505,811 - 108,507,240UniSTSGRCh37
Build 366108,612,504 - 108,613,933RGDNCBI36
Celera6109,252,309 - 109,253,738RGD
HuRef6106,074,059 - 106,075,484UniSTS
stSG634183  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,507,221 - 108,508,294UniSTSGRCh37
Build 366108,613,914 - 108,614,987RGDNCBI36
Celera6109,253,719 - 109,254,788RGD
HuRef6106,075,465 - 106,076,538UniSTS
stSG634184  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376108,508,275 - 108,509,758UniSTSGRCh37
GRCh376108,508,275 - 108,509,738UniSTSGRCh37
GRCh376108,508,275 - 108,509,726UniSTSGRCh37
Build 366108,614,968 - 108,616,431RGDNCBI36
Celera6109,254,769 - 109,256,220UniSTS
Celera6109,254,769 - 109,256,232RGD
Celera6109,254,769 - 109,256,252UniSTS
HuRef6106,076,519 - 106,077,988UniSTS
HuRef6106,076,519 - 106,078,002UniSTS
HuRef6106,076,519 - 106,077,970UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 3 1 1 1291 8 3
Low 13 145 145 8 145 8 34 11 910 33 34 56 6 1 9
Below cutoff 808 1187 873 293 733 154 2130 740 1014 184 727 755 141 452 1374 2

Sequence


RefSeq Acc Id: ENST00000368983   ⟹   ENSP00000357979
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6108,168,023 - 108,188,802 (+)Ensembl
RefSeq Acc Id: ENST00000368986   ⟹   ENSP00000357982
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6108,166,022 - 108,188,805 (+)Ensembl
RefSeq Acc Id: ENST00000426403   ⟹   ENSP00000416908
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6108,168,763 - 108,176,626 (+)Ensembl
RefSeq Acc Id: ENST00000484978
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl6108,176,104 - 108,178,147 (+)Ensembl
RefSeq Acc Id: NM_001286102   ⟹   NP_001273031
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh386108,168,023 - 108,188,809 (+)NCBI
HuRef6106,055,508 - 106,078,257 (+)NCBI
CHM1_16108,752,200 - 108,772,994 (+)NCBI
T2T-CHM13v2.06109,345,130 - 109,365,912 (+)NCBI
Sequence:
RefSeq Acc Id: NM_003269   ⟹   NP_003260
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh386108,166,022 - 108,188,805 (+)NCBI
GRCh376108,487,215 - 108,510,013 (+)ENTREZGENE
GRCh376108,487,215 - 108,510,013 (+)NCBI
Build 366108,593,955 - 108,616,706 (+)NCBI Archive
HuRef6106,055,508 - 106,078,257 (+)NCBI
CHM1_16108,750,235 - 108,772,994 (+)NCBI
T2T-CHM13v2.06109,343,129 - 109,365,908 (+)NCBI
Sequence:
RefSeq Acc Id: NP_003260   ⟸   NM_003269
- Peptide Label: isoform b
- UniProtKB: Q6ZMP8 (UniProtKB/Swiss-Prot),   Q9Y466 (UniProtKB/Swiss-Prot),   B6ZGT9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273031   ⟸   NM_001286102
- Peptide Label: isoform a
- UniProtKB: Q9Y466 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000416908   ⟸   ENST00000426403
RefSeq Acc Id: ENSP00000357979   ⟸   ENST00000368983
RefSeq Acc Id: ENSP00000357982   ⟸   ENST00000368986
Protein Domains
NR LBD   Nuclear receptor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Y466-F1-model_v2 AlphaFold Q9Y466 1-385 view protein structure

Promoters
RGD ID:7208831
Promoter ID:EPDNEW_H10162
Type:initiation region
Name:NR2E1_1
Description:nuclear receptor subfamily 2 group E member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh386108,166,091 - 108,166,151EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:7973 AgrOrtholog
COSMIC NR2E1 COSMIC
Ensembl Genes ENSG00000112333 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000368983 ENTREZGENE
  ENST00000368983.3 UniProtKB/Swiss-Prot
  ENST00000368986 ENTREZGENE
  ENST00000368986.9 UniProtKB/Swiss-Prot
  ENST00000426403.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.50.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000112333 GTEx
HGNC ID HGNC:7973 ENTREZGENE
Human Proteome Map NR2E1 Human Proteome Map
InterPro NHR-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:7101 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 7101 ENTREZGENE
OMIM 603849 OMIM
PANTHER NUCLEAR HORMONE RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR RECEPTOR SUBFAMILY 2 GROUP E MEMBER 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA31756 PharmGKB
PRINTS STRDHORMONER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HOLI UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48508 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A6PVF6_HUMAN UniProtKB/TrEMBL
  B6ZGT9 ENTREZGENE, UniProtKB/TrEMBL
  NR2E1_HUMAN UniProtKB/Swiss-Prot
  Q6ZMP8 ENTREZGENE
  Q9Y466 ENTREZGENE
UniProt Secondary Q6ZMP8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 NR2E1  nuclear receptor subfamily 2 group E member 1    nuclear receptor subfamily 2, group E, member 1  Symbol and/or name change 5135510 APPROVED