MIR182 (microRNA 182) - Rat Genome Database

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Gene: MIR182 (microRNA 182) Homo sapiens
Analyze
Symbol: MIR182
Name: microRNA 182
RGD ID: 1346166
HGNC Page HGNC:31553
Description: Enables mRNA base-pairing translational repressor activity. Involved in several processes, including cellular response to cholesterol; positive regulation of biosynthetic process; and regulation of cell migration. Located in extracellular space.
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: mir-182; MIRN182; miRNA182
RGD Orthologs
Mouse
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387129,770,383 - 129,770,492 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7129,770,383 - 129,770,492 (-)EnsemblGRCh38hg38GRCh38
GRCh377129,410,223 - 129,410,332 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367129,197,458 - 129,197,567 (-)NCBINCBI36Build 36hg18NCBI36
Celera7124,205,968 - 124,206,077 (-)NCBICelera
Cytogenetic Map7q32.2NCBI
HuRef7123,771,508 - 123,771,617 (-)NCBIHuRef
CHM1_17129,343,614 - 129,343,723 (-)NCBICHM1_1
T2T-CHM13v2.07131,083,517 - 131,083,626 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27128,794,499 - 128,794,608 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
2. MicroRNA-31 activates the RAS pathway and functions as an oncogenic MicroRNA in human colorectal cancer by repressing RAS p21 GTPase activating protein 1 (RASA1). Sun D, etal., J Biol Chem. 2013 Mar 29;288(13):9508-18. doi: 10.1074/jbc.M112.367763. Epub 2013 Jan 15.
Additional References at PubMed
PMID:12624257   PMID:16381832   PMID:17597072   PMID:17604727   PMID:17616659   PMID:19188590   PMID:19574223   PMID:20370992   PMID:20420807   PMID:20472885   PMID:20656788   PMID:21037258  
PMID:21195000   PMID:21503569   PMID:22045813   PMID:22086602   PMID:22134538   PMID:22322863   PMID:22325466   PMID:22582938   PMID:22681717   PMID:22790015   PMID:22848417   PMID:23006329  
PMID:23019418   PMID:23153509   PMID:23169479   PMID:23226455   PMID:23262295   PMID:23296900   PMID:23313739   PMID:23329838   PMID:23333633   PMID:23354685   PMID:23383207   PMID:23430586  
PMID:23474644   PMID:23474751   PMID:23783433   PMID:23823476   PMID:23874837   PMID:23877371   PMID:23906647   PMID:23987127   PMID:24001901   PMID:24021963   PMID:24053448   PMID:24077281  
PMID:24277930   PMID:24404152   PMID:24412053   PMID:24445397   PMID:24447717   PMID:24518785   PMID:24519909   PMID:24575749   PMID:24615484   PMID:24801147   PMID:24865442   PMID:24884732  
PMID:24886554   PMID:24971532   PMID:25012722   PMID:25031782   PMID:25040542   PMID:25115394   PMID:25180607   PMID:25269767   PMID:25326859   PMID:25394902   PMID:25530976   PMID:25663355  
PMID:25676538   PMID:25682742   PMID:25695717   PMID:25738520   PMID:25739014   PMID:25798833   PMID:25838542   PMID:25873390   PMID:25903466   PMID:25975295   PMID:26063957   PMID:26126858  
PMID:26191165   PMID:26205124   PMID:26234681   PMID:26314219   PMID:26472020   PMID:26518141   PMID:26563369   PMID:26567912   PMID:26646931   PMID:26847831   PMID:26858310   PMID:26978735  
PMID:27071841   PMID:27081087   PMID:27109471   PMID:27196584   PMID:27199451   PMID:27246830   PMID:27262453   PMID:27295517   PMID:27468875   PMID:27476169   PMID:27512949   PMID:27537254  
PMID:27631180   PMID:27641336   PMID:27748882   PMID:27797718   PMID:27894095   PMID:27936052   PMID:27936146   PMID:27996004   PMID:28043147   PMID:28079885   PMID:28122586   PMID:28137422  
PMID:28259995   PMID:28298075   PMID:28412207   PMID:28412746   PMID:28663557   PMID:28731158   PMID:28767179   PMID:28855441   PMID:28940757   PMID:29030743   PMID:29054094   PMID:29136958  
PMID:29197182   PMID:29323718   PMID:29353209   PMID:29361949   PMID:29409027   PMID:29556721   PMID:29601800   PMID:29636077   PMID:29655792   PMID:29673457   PMID:29792850   PMID:29873516  
PMID:29894685   PMID:29955039   PMID:29986736   PMID:30003924   PMID:30021359   PMID:30037856   PMID:30066886   PMID:30095215   PMID:30107165   PMID:30143449   PMID:30205384   PMID:30268751  
PMID:30285878   PMID:30307642   PMID:30320366   PMID:30380528   PMID:30402829   PMID:30509302   PMID:30542706   PMID:30570871   PMID:30666836   PMID:30688676   PMID:30703341   PMID:30792263  
PMID:30810094   PMID:30840271   PMID:30856381   PMID:30868666   PMID:30945348   PMID:30949866   PMID:30974224   PMID:30993113   PMID:31045265   PMID:31131477   PMID:31148222   PMID:31247272  
PMID:31262449   PMID:31301086   PMID:31429725   PMID:31540771   PMID:31605468   PMID:31697978   PMID:31844042   PMID:31906958   PMID:31994428   PMID:31996265   PMID:32031046   PMID:32032908  
PMID:32073999   PMID:32206004   PMID:32213205   PMID:32255303   PMID:32366676   PMID:32373233   PMID:32402537   PMID:32473243   PMID:32492046   PMID:32495876   PMID:32541092   PMID:32552665  
PMID:32684596   PMID:32729377   PMID:32729957   PMID:32867454   PMID:32913183   PMID:32996748   PMID:33034848   PMID:33059751   PMID:33099947   PMID:33128684   PMID:33175907   PMID:33277846  
PMID:33283362   PMID:33313953   PMID:33361718   PMID:33400022   PMID:33443164   PMID:33456347   PMID:33506890   PMID:33621133   PMID:33686422   PMID:33751900   PMID:33884382   PMID:33973644  
PMID:33978382   PMID:34037099   PMID:34077501   PMID:34238206   PMID:34294040   PMID:34366325   PMID:34525952   PMID:34542062   PMID:34591354   PMID:34595724   PMID:34740363   PMID:34935052  
PMID:35028929   PMID:35030981   PMID:35068163   PMID:35129808   PMID:35156729   PMID:35204688   PMID:35316129   PMID:35378241   PMID:35413135   PMID:35501813   PMID:35715772   PMID:35930829  
PMID:36308360   PMID:36463076   PMID:36768146   PMID:36905318   PMID:36980984   PMID:37021573   PMID:37047006   PMID:37127752   PMID:37140231   PMID:37155311   PMID:37695492   PMID:37752532  
PMID:37878495   PMID:37887350   PMID:37948986   PMID:37952722   PMID:38018594   PMID:38037859   PMID:38180718   PMID:38205594   PMID:38266777   PMID:38650133   PMID:38760850   PMID:38796528  
PMID:39037913   PMID:39098231   PMID:39402299   PMID:39433788  


Genomics

Comparative Map Data
MIR182
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387129,770,383 - 129,770,492 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7129,770,383 - 129,770,492 (-)EnsemblGRCh38hg38GRCh38
GRCh377129,410,223 - 129,410,332 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367129,197,458 - 129,197,567 (-)NCBINCBI36Build 36hg18NCBI36
Celera7124,205,968 - 124,206,077 (-)NCBICelera
Cytogenetic Map7q32.2NCBI
HuRef7123,771,508 - 123,771,617 (-)NCBIHuRef
CHM1_17129,343,614 - 129,343,723 (-)NCBICHM1_1
T2T-CHM13v2.07131,083,517 - 131,083,626 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27128,794,499 - 128,794,608 (-)NCBI
Mir182
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39630,165,917 - 30,165,991 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl630,165,917 - 30,165,991 (-)EnsemblGRCm39 Ensembl
GRCm38630,165,918 - 30,165,992 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl630,165,918 - 30,165,992 (-)EnsemblGRCm38mm10GRCm38
MGSCv37630,115,918 - 30,115,992 (-)NCBIGRCm37MGSCv37mm9NCBIm37
Celera630,172,634 - 30,172,708 (-)NCBICelera
Cytogenetic Map6A3.3NCBI
cM Map612.52NCBI


Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 7q32.1-36.3(chr7:129310166-159282390)x3 copy number gain See cases [RCV000050876] Chr7:129310166..159282390 [GRCh38]
Chr7:128950007..159075079 [GRCh37]
Chr7:128737243..158767840 [NCBI36]
Chr7:7q32.1-36.3		 pathogenic
GRCh38/hg38 7q32.1-33(chr7:128747478-134018250)x3 copy number gain See cases [RCV000051072] Chr7:128747478..134018250 [GRCh38]
Chr7:128387532..133703003 [GRCh37]
Chr7:128174768..133353543 [NCBI36]
Chr7:7q32.1-33		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:53985-159282531)x1 copy number loss See cases [RCV000052250] Chr7:53985..159282531 [GRCh38]
Chr7:53985..159075220 [GRCh37]
Chr7:149068..158767981 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q31.33-32.3(chr7:126859732-132750936)x1 copy number loss See cases [RCV000054171] Chr7:126859732..132750936 [GRCh38]
Chr7:126499786..132435696 [GRCh37]
Chr7:126287022..132086236 [NCBI36]
Chr7:7q31.33-32.3		 pathogenic
GRCh38/hg38 7p22.3-q36.3(chr7:54185-159282390)x1 copy number loss See cases [RCV000135401] Chr7:54185..159282390 [GRCh38]
Chr7:54185..159075079 [GRCh37]
Chr7:149268..158767840 [NCBI36]
Chr7:7p22.3-q36.3		 pathogenic
GRCh38/hg38 7q21.3-36.3(chr7:97419852-158923762)x3 copy number gain See cases [RCV000136717] Chr7:97419852..158923762 [GRCh38]
Chr7:97049164..158716453 [GRCh37]
Chr7:96887100..158409214 [NCBI36]
Chr7:7q21.3-36.3		 pathogenic
GRCh38/hg38 7q31.2-33(chr7:117326805-134790689)x1 copy number loss See cases [RCV000138226] Chr7:117326805..134790689 [GRCh38]
Chr7:116966859..134475440 [GRCh37]
Chr7:116754095..134125980 [NCBI36]
Chr7:7q31.2-33		 pathogenic
GRCh38/hg38 7q31.32-36.3(chr7:121863759-159335865)x3 copy number gain See cases [RCV000138847] Chr7:121863759..159335865 [GRCh38]
Chr7:121503813..159128555 [GRCh37]
Chr7:121291049..158821316 [NCBI36]
Chr7:7q31.32-36.3		 pathogenic
GRCh38/hg38 7q31.2-36.3(chr7:115459015-159325817)x3 copy number gain See cases [RCV000141413] Chr7:115459015..159325817 [GRCh38]
Chr7:115099069..159118507 [GRCh37]
Chr7:114886305..158811268 [NCBI36]
Chr7:7q31.2-36.3		 pathogenic
GRCh38/hg38 7q31.33-33(chr7:124170657-134163594)x1 copy number loss See cases [RCV000142552] Chr7:124170657..134163594 [GRCh38]
Chr7:123810711..133848346 [GRCh37]
Chr7:123597947..133498886 [NCBI36]
Chr7:7q31.33-33		 pathogenic
TMEM106B-BRAF fusion deletion Pleomorphic xanthoastrocytoma [RCV000454357] Chr7:12258147..140494267 [GRCh37]
Chr7:7p21.3-q34		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43360-159119707)x1 copy number loss See cases [RCV000446044] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q22.1-36.3(chr7:98969247-159119707)x3 copy number gain See cases [RCV000447709] Chr7:98969247..159119707 [GRCh37]
Chr7:7q22.1-36.3		 pathogenic
GRCh37/hg19 7q32.1-34(chr7:127295698-139524358)x1 copy number loss See cases [RCV000447722] Chr7:127295698..139524358 [GRCh37]
Chr7:7q32.1-34		 pathogenic
GRCh37/hg19 7q32.1-36.3(chr7:128276078-159119707)x3 copy number gain See cases [RCV000447956] Chr7:128276078..159119707 [GRCh37]
Chr7:7q32.1-36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707) copy number gain See cases [RCV000510686] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:43361-159119707)x3 copy number gain See cases [RCV000511549] Chr7:43361..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q22.1-36.3(chr7:98693388-159119707)x3 copy number gain not provided [RCV000682911] Chr7:98693388..159119707 [GRCh37]
Chr7:7q22.1-36.3		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:10704-159122532)x3 copy number gain not provided [RCV000746278] Chr7:10704..159122532 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
Single allele complex Renal transitional cell carcinoma [RCV000754611] Chr7:129367205..140482957 [GRCh37]
Chr7:7q32.2-34		 likely pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:44935-159126310)x3 copy number gain not provided [RCV000746280] Chr7:44935..159126310 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q32.2(chr7:129404661-129414161)x1 copy number loss not provided [RCV000747049] Chr7:129404661..129414161 [GRCh37]
Chr7:7q32.2		 benign
GRCh37/hg19 7p22.3-q36.3(chr7:10365-159119707)x3 copy number gain not provided [RCV000848126] Chr7:10365..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q32.1-36.3(chr7:128312450-159119220) copy number gain not provided [RCV000767558] Chr7:128312450..159119220 [GRCh37]
Chr7:7q32.1-36.3		 pathogenic
Single allele complex Ring chromosome 7 [RCV002280646] Chr7:43360..159119707 [GRCh37]
Chr7:7p22.3-q36.3		 pathogenic
GRCh37/hg19 7q31.1-36.3(chr7:109251060-159119707)x3 copy number gain not provided [RCV001005994] Chr7:109251060..159119707 [GRCh37]
Chr7:7q31.1-36.3		 pathogenic
GRCh37/hg19 7q31.33-33(chr7:124103982-134693590) copy number loss not specified [RCV002053726] Chr7:124103982..134693590 [GRCh37]
Chr7:7q31.33-33		 pathogenic
GRCh37/hg19 7q32.1-34(chr7:127295698-139524358) copy number loss not specified [RCV002053727] Chr7:127295698..139524358 [GRCh37]
Chr7:7q32.1-34		 pathogenic
GRCh37/hg19 7q31.33-33(chr7:123967475-132729981) copy number loss not specified [RCV002053723] Chr7:123967475..132729981 [GRCh37]
Chr7:7q31.33-33		 pathogenic
GRCh37/hg19 7p22.3-q36.3(chr7:56604613-96692931)x1 copy number loss See cases [RCV002287832] Chr7:56604613..96692931 [GRCh37]
Chr7:7p22.3-q36.3		 uncertain significance
GRCh37/hg19 7q32.1-33(chr7:129147455-132777678)x1 copy number loss not provided [RCV002473525] Chr7:129147455..132777678 [GRCh37]
Chr7:7q32.1-33		 uncertain significance
GRCh37/hg19 7q31.31-33(chr7:120582003-137699953)x1 copy number loss not specified [RCV003986721] Chr7:120582003..137699953 [GRCh37]
Chr7:7q31.31-33		 pathogenic
miRNA Target Status

Confirmed Targets
Gene TargetMature miRNAMethod NameResult TypeData TypeSupport TypePMID
CDKN1Ahsa-miR-182-5pMirtarbaseexternal_infoqRT-PCR//Luciferase reporter assay//Western blotNon-Functional MTI20190813
FOXO3hsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI19188590
MTSS1hsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI22322863
MTSS1hsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23383207
FOXO1hsa-miR-182-5pMirtarbaseexternal_infoqRT-PCR//Luciferase reporter assay//Western blotFunctional MTI19574223
RARGhsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//Western blotFunctional MTI19782699
MITFhsa-miR-182-5pMirtarbaseexternal_infoFlow//Luciferase reporter assay//qRT-PCR//Western Functional MTI22848417
ADCY6hsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCRFunctional MTI20656788
MITFhsa-miR-182-5pMirtarbaseexternal_infoimmunohistochemistry//Microarray//qRT-PCR//WesternFunctional MTI19167416
EP300hsa-miR-182-5pMirtarbaseexternal_infoMicroarrayFunctional MTI (Weak)19569050
CREB1hsa-miR-182-5pMirtarbaseexternal_infoGFP reporter assayFunctional MTI22325466
CYLDhsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI23006329
PDCD4hsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI23296900
PFN1hsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23430586
SNAI2hsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23354685
RECKhsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI23333633
RECKhsa-miR-182-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI23226455
CISD2hsa-miR-182-5pMirtarbaseexternal_infoCLASHFunctional MTI (Weak)23622248
PFN1hsa-miR-182-5pOncomiRDBexternal_infoNANA23430586
FOXF2hsa-miR-182-5pOncomiRDBexternal_infoNANA23383207
SNAI2hsa-miR-182-5pOncomiRDBexternal_infoNANA23354685
GNA13hsa-miR-182-5pOncomiRDBexternal_infoNANA23329838
PDCD4hsa-miR-182-5pOncomiRDBexternal_infoNANA23296900
FOXO3hsa-miR-182-5pOncomiRDBexternal_infoNANA23262295
CYLDhsa-miR-182-5pOncomiRDBexternal_infoNANA23006329
MTSS1hsa-miR-182-5pOncomiRDBexternal_infoNANA22681717
CREB1hsa-miR-182-5pOncomiRDBexternal_infoNANA22325466
BRCA1hsa-miR-182-5pOncomiRDBexternal_infoNANA21195000
RGS17hsa-miR-182-5pOncomiRDBexternal_infoNANA20420807
FOXO1hsa-miR-182-5pOncomiRDBexternal_infoNANA19574223
FOXO3hsa-miR-182-5pOncomiRDBexternal_infoNANA19188590
ZNG1Ahsa-miR-182-3pMirtarbaseexternal_infoCLASHFunctional MTI (Weak)23622248
ADCY6hsa-miR-182-3pMirecordsexternal_infoNANA17597072
RARGhsa-miR-182-3pMirecordsexternal_infoNANA19782699
IGF1Rhsa-miR-182-3pMirecordsexternal_infoNANA19502786

Predicted Targets
Summary Value
Count of predictions:27387
Count of gene targets:10271
Count of transcripts:20223
Interacting mature miRNAs:hsa-miR-182-3p, hsa-miR-182-5p
Prediction methods:Microtar, Miranda, Pita, Pita,Targetscan, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
2 80 42 19 116 33 122 2 10 58 10 66 200 103 13 55 28 71 110 5

Sequence


Ensembl Acc Id: ENST00000385255
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl7129,770,383 - 129,770,492 (-)Ensembl
RefSeq Acc Id: NR_029614
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh387129,770,383 - 129,770,492 (-)NCBI
GRCh377129,410,223 - 129,410,332 (-)RGD
Celera7124,205,968 - 124,206,077 (-)RGD
HuRef7123,771,508 - 123,771,617 (-)ENTREZGENE
CHM1_17129,343,614 - 129,343,723 (-)NCBI
T2T-CHM13v2.07131,083,517 - 131,083,626 (-)NCBI
CRA_TCAGchr7v27128,794,499 - 128,794,608 (-)ENTREZGENE
Sequence:

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:31553 AgrOrtholog
COSMIC MIR182 COSMIC
Ensembl Genes ENSG00000207990 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000385255 ENTREZGENE
GTEx ENSG00000207990 GTEx
HGNC ID HGNC:31553 ENTREZGENE
Human Proteome Map MIR182 Human Proteome Map
miRBase MI0000272 ENTREZGENE
NCBI Gene 406958 ENTREZGENE
OMIM 611607 OMIM
PharmGKB PA164722527 PharmGKB
RNAcentral URS00001CC379 RNACentral
  URS000075B447 RNACentral
  URS000075B66E RNACentral