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Gene: VPS16 (VPS16 core subunit of CORVET and HOPS complexes) Homo sapiens
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Symbol: VPS16
Name: VPS16 core subunit of CORVET and HOPS complexes
Description: Predicted to have actin binding activity. Involved in autophagosome maturation and endosome to lysosome transport. Localizes to HOPS complex; endosome; and lysosome.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: hVPS16; vacuolar protein sorting 16 (yeast); vacuolar protein sorting 16 homolog; vacuolar protein sorting 16 homolog A (S. cerevisiae); vacuolar protein sorting protein 16; vacuolar protein sorting-associated protein 16 homolog; VPS16 CORVET/HOPS core subunit; VPS16, CORVET/HOPS core subunit
Orthologs:
Mus musculus (house mouse) : Vps16 (VSP16 CORVET/HOPS core subunit)  MGI  Alliance
Rattus norvegicus (Norway rat) : Vps16 (VPS16 core subunit of CORVET and HOPS complexes)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Vps16 (VPS16 core subunit of CORVET and HOPS complexes)
Pan paniscus (bonobo/pygmy chimpanzee) : VPS16 (VPS16 core subunit of CORVET and HOPS complexes)
Canis lupus familiaris (dog) : VPS16 (VPS16 core subunit of CORVET and HOPS complexes)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Vps16 (VPS16 core subunit of CORVET and HOPS complexes)
Sus scrofa (pig) : VPS16 (VPS16 core subunit of CORVET and HOPS complexes)
Chlorocebus sabaeus (African green monkey) : VPS16 (VPS16 core subunit of CORVET and HOPS complexes)
Heterocephalus glaber (naked mole-rat) : Vps16 (VPS16 core subunit of CORVET and HOPS complexes)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 Ensembl202,840,703 - 2,866,732 (+)EnsemblGRCh38hg38GRCh38
GRCh38202,840,697 - 2,866,732 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37202,821,373 - 2,847,378 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36202,769,373 - 2,795,380 (+)NCBINCBI36hg18NCBI36
Build 34202,792,592 - 2,795,380NCBI
Celera202,882,628 - 2,909,733 (+)NCBI
Cytogenetic Map20p13NCBI
HuRef202,769,563 - 2,796,285 (+)NCBIHuRef
CHM1_1202,821,353 - 2,847,380 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
Nomenclature History
 
More on VPS16
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1345721
Created: 2005-03-08
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.