MIR100 (microRNA 100) - Rat Genome Database

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Gene: MIR100 (microRNA 100) Homo sapiens
Analyze
Symbol: MIR100
Name: microRNA 100
RGD ID: 1345382
HGNC Page HGNC
Description: Predicted to act upstream of or within several processes, including cellular hyperosmotic salinity response; cellular response to forskolin; and cellular response to leukemia inhibitory factor. Predicted to be located in synapse.
Type: ncrna
RefSeq Status: PROVISIONAL
Also known as: miR-100; MIRN100
RGD Orthologs
Mouse
Rat
Dog
Pig
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl11122,152,229 - 122,152,308 (-)EnsemblGRCh38hg38GRCh38
GRCh3811122,152,229 - 122,152,308 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3711122,022,937 - 122,023,016 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611121,528,146 - 121,528,225 (-)NCBINCBI36hg18NCBI36
Celera11119,183,604 - 119,183,683 (-)NCBI
Cytogenetic Map11q24.1NCBI
HuRef11117,969,463 - 117,969,542 (-)NCBIHuRef
CHM1_111121,910,234 - 121,910,313 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
synapse  (ISO)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11914277   PMID:16381832   PMID:17604727   PMID:17616659   PMID:18548003   PMID:19138993   PMID:19372056   PMID:19739117   PMID:19851984   PMID:20081105   PMID:20158877   PMID:20585341  
PMID:20732906   PMID:20869334   PMID:20889907   PMID:21037258   PMID:21212412   PMID:21636267   PMID:21643017   PMID:21785383   PMID:22099053   PMID:22120675   PMID:22246341   PMID:22249248  
PMID:22393979   PMID:22684006   PMID:22920721   PMID:22926517   PMID:23151088   PMID:23173870   PMID:23292834   PMID:23327924   PMID:23373509   PMID:23378187   PMID:23418555   PMID:23503652  
PMID:23611267   PMID:23724047   PMID:23778527   PMID:23842624   PMID:23915977   PMID:24030073   PMID:24048714   PMID:24317814   PMID:24559685   PMID:24568519   PMID:24586203   PMID:24626817  
PMID:24740415   PMID:24805183   PMID:25026290   PMID:25071007   PMID:25109390   PMID:25216869   PMID:25217527   PMID:25218280   PMID:25344675   PMID:25361001   PMID:25367852   PMID:25483280  
PMID:25519160   PMID:25537513   PMID:25703026   PMID:25736855   PMID:25740059   PMID:25757558   PMID:25992776   PMID:26018508   PMID:26130569   PMID:26209130   PMID:26261633   PMID:26279428  
PMID:26306402   PMID:26537584   PMID:26606597   PMID:26646931   PMID:26662386   PMID:26684239   PMID:26744318   PMID:26916216   PMID:26928010   PMID:26973292   PMID:27035873   PMID:27340920  
PMID:27492459   PMID:27524417   PMID:27542871   PMID:27577856   PMID:27631180   PMID:27748936   PMID:28032929   PMID:28416774   PMID:28431233   PMID:28553110   PMID:28642484   PMID:28741069  
PMID:28765937   PMID:28798470   PMID:28956730   PMID:29035371   PMID:29208678   PMID:29673591   PMID:29748571   PMID:29749451   PMID:29880533   PMID:30102375   PMID:30478850   PMID:30791979  
PMID:30848099   PMID:30955173   PMID:31176032   PMID:31229921   PMID:31231851   PMID:31448409   PMID:31456425   PMID:31532098   PMID:31598748   PMID:31694930   PMID:31801665   PMID:32299427  
PMID:32364673   PMID:32373980   PMID:32767323   PMID:32911741   PMID:33191875   PMID:33221758   PMID:33256278   PMID:33293585   PMID:33592729   PMID:34256859  


Genomics

Comparative Map Data
MIR100
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl11122,152,229 - 122,152,308 (-)EnsemblGRCh38hg38GRCh38
GRCh3811122,152,229 - 122,152,308 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3711122,022,937 - 122,023,016 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611121,528,146 - 121,528,225 (-)NCBINCBI36hg18NCBI36
Celera11119,183,604 - 119,183,683 (-)NCBI
Cytogenetic Map11q24.1NCBI
HuRef11117,969,463 - 117,969,542 (-)NCBIHuRef
CHM1_111121,910,234 - 121,910,313 (-)NCBICHM1_1
Mir100
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39941,442,721 - 41,442,800 (+)NCBIGRCm39mm39
GRCm39 Ensembl941,442,721 - 41,442,800 (+)Ensembl
GRCm38941,531,425 - 41,531,504 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl941,531,425 - 41,531,504 (+)EnsemblGRCm38mm10GRCm38
MGSCv37941,339,508 - 41,339,587 (+)NCBIGRCm37mm9NCBIm37
Celera938,770,225 - 38,770,304 (+)NCBICelera
Cytogenetic Map9A5.1NCBI
Mir100
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2841,901,225 - 41,901,304 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl841,901,225 - 41,901,304 (+)Ensembl
Rnor_6.0845,746,948 - 45,747,027 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl845,746,948 - 45,747,027 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0844,222,150 - 44,222,229 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera841,500,067 - 41,500,146 (+)NCBICelera
Cytogenetic Map8q22NCBI
MIR99A-2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1512,047,369 - 12,047,425 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl512,047,369 - 12,047,425 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha512,102,421 - 12,102,477 (+)NCBI
ROS_Cfam_1.0511,996,862 - 11,996,918 (+)NCBI
UMICH_Zoey_3.1512,100,869 - 12,100,925 (+)NCBI
UNSW_CanFamBas_1.0512,040,078 - 12,040,134 (+)NCBI
UU_Cfam_GSD_1.0512,078,962 - 12,079,018 (+)NCBI
MIR100
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl949,157,909 - 49,157,988 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1949,157,909 - 49,157,988 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2954,383,382 - 54,383,461 (-)NCBISscrofa10.2Sscrofa10.2susScr3

miRNA Target Status

Confirmed Targets
Gene TargetMature miRNAMethod NameResult TypeData TypeSupport TypePMID
IGF1Rhsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI21654750
IGF1Rhsa-miR-100-5pMirtarbaseexternal_infoELISA//GFP reporter assay//Immunoblot//ImmunopreciFunctional MTI21643012
PLK1hsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCRFunctional MTI19739117
PLK1hsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI22120675
MMP13hsa-miR-100-5pMirtarbaseexternal_infoMicroarray//qRT-PCR//Western blotFunctional MTI19396866
FGFR3hsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI19843843
ID1hsa-miR-100-5pMirtarbaseexternal_infoMicroarray//qRT-PCRFunctional MTI (Weak)19396866
ATMhsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI20869334
BMPR2hsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI22684006
FLT1hsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assayFunctional MTI22955733
MTORhsa-miR-100-5pMirtarbaseexternal_infoLuciferase reporter assay//qRT-PCR//Western blotFunctional MTI23292834
FOXN2hsa-miR-100-5pMirtarbaseexternal_infoCLASHFunctional MTI (Weak)23622248
MTORhsa-miR-100-5pMirecordsexternal_infoNANA20484036
FGFR3hsa-miR-100-5pMirecordsexternal_infoNANA19843843
PLK1hsa-miR-100-5pMirecordsexternal_infoNANA19739117
MTORhsa-miR-100-5pOncomiRDBexternal_infoNANA23292834
PLK1hsa-miR-100-5pOncomiRDBexternal_infoNANA23151088
PLK1hsa-miR-100-5pOncomiRDBexternal_infoNANA22249248
PLK1hsa-miR-100-5pOncomiRDBexternal_infoNANA22246341
PLK1hsa-miR-100-5pOncomiRDBexternal_infoNANA22120675
CTDSPLhsa-miR-100-5pOncomiRDBexternal_infoNANA21643017
SMARCA5hsa-miR-100-5pOncomiRDBexternal_infoNANA21212412
ATMhsa-miR-100-5pOncomiRDBexternal_infoNANA20869334
IGF1Rhsa-miR-100-5pOncomiRDBexternal_infoNANA20484036
PLK1hsa-miR-100-5pOncomiRDBexternal_infoNANA19739117

Predicted Targets
Summary Value
Count of predictions:16131
Count of gene targets:7897
Count of transcripts:13892
Interacting mature miRNAs:hsa-miR-100-3p, hsa-miR-100-5p
Prediction methods:Microtar, Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 2 1 2
Low 14 27 15 2 6 1 30 14 44 4 23 44 2 1 13 1
Below cutoff 16 11 7 2 7 1 15 13 15 5 10 13 1 8 4

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000385259
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl11122,152,229 - 122,152,308 (-)Ensembl
RefSeq Acc Id: NR_029515
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3811122,152,229 - 122,152,308 (-)NCBI
GRCh3711122,022,937 - 122,023,016 (-)RGD
Celera11119,183,604 - 119,183,683 (-)RGD
HuRef11117,969,463 - 117,969,542 (-)ENTREZGENE
CHM1_111121,910,234 - 121,910,313 (-)NCBI
Sequence:

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11q23.3-25(chr11:116851395-134998513)x3 copy number gain See cases [RCV000050331] Chr11:116851395..134998513 [GRCh38]
Chr11:116722111..134868407 [GRCh37]
Chr11:116227321..134373617 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:119433909-134998513)x1 copy number loss See cases [RCV000050905] Chr11:119433909..134998513 [GRCh38]
Chr11:119304619..134868407 [GRCh37]
Chr11:118809829..134373617 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:118789765-134998513)x3 copy number gain See cases [RCV000051213] Chr11:118789765..134998513 [GRCh38]
Chr11:118660474..134868407 [GRCh37]
Chr11:118165684..134373617 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:119215032-134998654)x1 copy number loss See cases [RCV000052715] Chr11:119215032..134998654 [GRCh38]
Chr11:119085742..134868548 [GRCh37]
Chr11:118590952..134373758 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:120507265-134576266)x1 copy number loss See cases [RCV000052716] Chr11:120507265..134576266 [GRCh38]
Chr11:120377974..134446160 [GRCh37]
Chr11:119883184..133951370 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q22.1-25(chr11:100348599-135040246)x3 copy number gain See cases [RCV000053638] Chr11:100348599..135040246 [GRCh38]
Chr11:100219331..134910140 [GRCh37]
Chr11:99724541..134415350 [NCBI36]
Chr11:11q22.1-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:120236432-135040246)x3 copy number gain See cases [RCV000053643] Chr11:120236432..135040246 [GRCh38]
Chr11:120107141..134910140 [GRCh37]
Chr11:119612351..134415350 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.3-24.2(chr11:120426093-124771213)x1 copy number loss See cases [RCV000134405] Chr11:120426093..124771213 [GRCh38]
Chr11:120296802..124641109 [GRCh37]
Chr11:119802012..124146319 [NCBI36]
Chr11:11q23.3-24.2
pathogenic
GRCh38/hg38 11q23.3-25(chr11:116851372-134998526)x3 copy number gain See cases [RCV000134064] Chr11:116851372..134998526 [GRCh38]
Chr11:116722088..134868420 [GRCh37]
Chr11:116227298..134373630 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.2-25(chr11:112864326-131189315)x3 copy number gain See cases [RCV000137582] Chr11:112864326..131189315 [GRCh38]
Chr11:112832130..131059210 [GRCh37]
Chr11:112240259..130564420 [NCBI36]
Chr11:11q23.2-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:116868935-135075271)x3 copy number gain See cases [RCV000137453] Chr11:116868935..135075271 [GRCh38]
Chr11:116739651..134945165 [GRCh37]
Chr11:116244861..134450377 [NCBI36]
Chr11:11q23.3-25
pathogenic|conflicting data from submitters
GRCh38/hg38 11q24.1-25(chr11:121780459-135075271)x1 copy number loss See cases [RCV000138014] Chr11:121780459..135075271 [GRCh38]
Chr11:121651167..134945165 [GRCh37]
Chr11:121156377..134450377 [NCBI36]
Chr11:11q24.1-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:120515759-135075271)x1 copy number loss See cases [RCV000138373] Chr11:120515759..135075271 [GRCh38]
Chr11:120386468..134945165 [GRCh37]
Chr11:119891678..134450377 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:116806268-135075271)x3 copy number gain See cases [RCV000138307] Chr11:116806268..135075271 [GRCh38]
Chr11:116676984..134945165 [GRCh37]
Chr11:116182194..134450377 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh38/hg38 11q23.3-24.2(chr11:117333952-127709156)x3 copy number gain See cases [RCV000139362] Chr11:117333952..127709156 [GRCh38]
Chr11:117204668..127579051 [GRCh37]
Chr11:116709878..127084261 [NCBI36]
Chr11:11q23.3-24.2
pathogenic
GRCh38/hg38 11q23.3-25(chr11:119424297-135075271)x1 copy number loss See cases [RCV000138947] Chr11:119424297..135075271 [GRCh38]
Chr11:119295007..134945165 [GRCh37]
Chr11:118800217..134450377 [NCBI36]
Chr11:11q23.3-25
pathogenic|likely benign
GRCh38/hg38 11q23.3-24.2(chr11:120080142-125829106)x1 copy number loss See cases [RCV000140070] Chr11:120080142..125829106 [GRCh38]
Chr11:119950851..125699001 [GRCh37]
Chr11:119456061..125204211 [NCBI36]
Chr11:11q23.3-24.2
pathogenic
GRCh38/hg38 11q24.1-25(chr11:121689052-135075271)x1 copy number loss See cases [RCV000139622] Chr11:121689052..135075271 [GRCh38]
Chr11:121559760..134945165 [GRCh37]
Chr11:121064970..134450377 [NCBI36]
Chr11:11q24.1-25
pathogenic|likely benign
GRCh38/hg38 11q24.1-25(chr11:121806547-135068576)x1 copy number loss See cases [RCV000142210] Chr11:121806547..135068576 [GRCh38]
Chr11:121677255..134938470 [GRCh37]
Chr11:121182465..134443680 [NCBI36]
Chr11:11q24.1-25
pathogenic
GRCh38/hg38 11q24.1-25(chr11:121611476-135068576)x1 copy number loss See cases [RCV000142185] Chr11:121611476..135068576 [GRCh38]
Chr11:121482185..134938470 [GRCh37]
Chr11:120987395..134443680 [NCBI36]
Chr11:11q24.1-25
pathogenic
GRCh38/hg38 11q23.3-25(chr11:116851395-134998513)x3 copy number gain See cases [RCV000148276] Chr11:116851395..134998513 [GRCh38]
Chr11:116722111..134868407 [GRCh37]
Chr11:116227321..134373617 [NCBI36]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:119807473-134868407)x1 copy number loss See cases [RCV000240237] Chr11:119807473..134868407 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:120615374-134868407)x1 copy number loss See cases [RCV000239781] Chr11:120615374..134868407 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:116691675-134889485) copy number gain not provided [RCV000767667] Chr11:116691675..134889485 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q24.1-25(chr11:121416261-134938470)x1 copy number loss See cases [RCV000511335] Chr11:121416261..134938470 [GRCh37]
Chr11:11q24.1-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:116681007-134938470)x3 copy number gain See cases [RCV000449449] Chr11:116681007..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:119513909-134938470)x1 copy number loss See cases [RCV000447077] Chr11:119513909..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q24.1-25(chr11:121501072-134868348)x1 copy number loss See cases [RCV000445814] Chr11:121501072..134868348 [GRCh37]
Chr11:11q24.1-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:116684163-134938470)x3 copy number gain See cases [RCV000447848] Chr11:116684163..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q24.1-25(chr11:121559102-134938470)x1 copy number loss See cases [RCV000449003] Chr11:121559102..134938470 [GRCh37]
Chr11:11q24.1-25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:120527021-134938470)x1 copy number loss See cases [RCV000511283] Chr11:120527021..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:121136603-134938470)x1 copy number loss See cases [RCV000510856] Chr11:121136603..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:116681007-134938470)x3 copy number gain See cases [RCV000512291] Chr11:116681007..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:119538664-134938470)x1 copy number loss not provided [RCV000683371] Chr11:119538664..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:116681007-134938470)x3 copy number gain not provided [RCV000683373] Chr11:116681007..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
Single allele duplication Schizophrenia [RCV000754124] Chr11:118989374..135076622 [GRCh38]
Chr11:11q23.3-25
likely pathogenic
GRCh37/hg19 11q23.3-25(chr11:116697066-134934063)x3 copy number gain not provided [RCV000737686] Chr11:116697066..134934063 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:116700253-134904063) copy number gain not provided [RCV000767816] Chr11:116700253..134904063 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:117830263-134938470)x3 copy number gain not provided [RCV000848151] Chr11:117830263..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:120576984-134934063)x1 copy number loss See cases [RCV000790567] Chr11:120576984..134934063 [GRCh37]
Chr11:11q23.3-25
pathogenic
GRCh37/hg19 11q23.3-25(chr11:120742540-134938470)x1 copy number loss not provided [RCV001006452] Chr11:120742540..134938470 [GRCh37]
Chr11:11q23.3-25
pathogenic
Single allele deletion Short stature [RCV001003892] Chr11:114433313..131230466 [GRCh37]
Chr11:11q23.2-25
likely pathogenic

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:31487 AgrOrtholog
COSMIC MIR100 COSMIC
Ensembl Genes ENSG00000207994 Ensembl, ENTREZGENE
Ensembl Transcript ENST00000385259 ENTREZGENE
GTEx ENSG00000207994 GTEx
HGNC ID HGNC:31487 ENTREZGENE
Human Proteome Map MIR100 Human Proteome Map
miRBase MI0000102 ENTREZGENE
NCBI Gene 406892 ENTREZGENE
OMIM 613186 OMIM
PharmGKB PA164722333 PharmGKB
RNAcentral URS00001A405B RNACentral
  URS000040D674 RNACentral
  URS000054969A RNACentral