LINGO2 (leucine rich repeat and Ig domain containing 2) - Rat Genome Database

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Gene: LINGO2 (leucine rich repeat and Ig domain containing 2) Homo sapiens
Analyze
Symbol: LINGO2
Name: leucine rich repeat and Ig domain containing 2
RGD ID: 1344562
HGNC Page HGNC:21207
Description: Predicted to act upstream of or within positive regulation of synapse assembly. Predicted to be located in membrane. Predicted to be active in several cellular components, including extracellular space; glutamatergic synapse; and synaptic membrane.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FLJ31810; LERN3; leucine rich repeat neuronal 6C; leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2; leucine-rich repeat neuronal protein 3; leucine-rich repeat neuronal protein 6C; LOC124906826; LRRN6C; uncharacterized LOC124906826
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38927,937,617 - 29,213,601 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl927,937,617 - 29,213,601 (-)EnsemblGRCh38hg38GRCh38
GRCh37927,937,615 - 29,213,599 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36927,938,528 - 28,709,303 (-)NCBINCBI36Build 36hg18NCBI36
Celera927,876,621 - 28,649,863 (-)NCBICelera
Cytogenetic Map9p21.2-p21.1NCBI
HuRef927,900,694 - 29,165,921 (-)NCBIHuRef
CHM1_1927,947,856 - 29,212,826 (-)NCBICHM1_1
T2T-CHM13v2.0927,948,210 - 29,231,596 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Megacolon  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:12975309   PMID:14686891   PMID:14702039   PMID:16344560   PMID:19240061   PMID:20200978   PMID:20369371   PMID:20379614   PMID:20694011   PMID:20935630   PMID:21287203  
PMID:21832049   PMID:21873635   PMID:22123311   PMID:23251661   PMID:23382691   PMID:23563607   PMID:24096698   PMID:24390345   PMID:24962325   PMID:25711307   PMID:28514442   PMID:30426492  
PMID:30696080   PMID:33961781   PMID:36243803   PMID:38888423  


Genomics

Comparative Map Data
LINGO2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38927,937,617 - 29,213,601 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl927,937,617 - 29,213,601 (-)EnsemblGRCh38hg38GRCh38
GRCh37927,937,615 - 29,213,599 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36927,938,528 - 28,709,303 (-)NCBINCBI36Build 36hg18NCBI36
Celera927,876,621 - 28,649,863 (-)NCBICelera
Cytogenetic Map9p21.2-p21.1NCBI
HuRef927,900,694 - 29,165,921 (-)NCBIHuRef
CHM1_1927,947,856 - 29,212,826 (-)NCBICHM1_1
T2T-CHM13v2.0927,948,210 - 29,231,596 (-)NCBIT2T-CHM13v2.0
Lingo2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39435,696,778 - 36,951,929 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl435,706,647 - 36,951,747 (-)EnsemblGRCm39 Ensembl
GRCm38435,696,778 - 36,951,744 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl435,706,647 - 36,951,747 (-)EnsemblGRCm38mm10GRCm38
MGSCv37435,653,896 - 36,898,777 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36435,896,291 - 36,034,083 (-)NCBIMGSCv36mm8
Celera435,399,009 - 36,648,653 (-)NCBICelera
Cytogenetic Map4A5NCBI
cM Map417.74NCBI
Lingo2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8555,166,250 - 56,488,672 (-)NCBIGRCr8
mRatBN7.2550,370,744 - 51,687,252 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl550,367,101 - 50,516,956 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx552,565,927 - 52,708,396 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0554,163,406 - 54,305,883 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0554,065,306 - 54,207,789 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0551,466,367 - 51,638,161 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0556,027,971 - 56,198,552 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4552,476,741 - 52,590,042 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera549,086,900 - 49,231,177 (-)NCBICelera
Cytogenetic Map5q21-q22NCBI
Lingo2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554726,968,576 - 6,970,396 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554725,790,522 - 6,971,152 (+)NCBIChiLan1.0ChiLan1.0
LINGO2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21195,382,085 - 96,628,142 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1995,388,029 - 96,634,088 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0927,760,276 - 29,008,800 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1928,366,227 - 29,779,879 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl928,377,472 - 28,379,292 (-)Ensemblpanpan1.1panPan2
LINGO2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11145,997,900 - 47,115,857 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1145,998,249 - 46,000,069 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1144,665,908 - 45,803,522 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01146,943,920 - 48,068,400 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1146,944,491 - 46,946,845 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11145,599,200 - 46,722,220 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01145,496,756 - 46,618,731 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01146,237,174 - 47,354,240 (-)NCBIUU_Cfam_GSD_1.0
Lingo2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947160,911,991 - 161,400,764 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366111,747,626 - 1,749,446 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366111,267,679 - 1,434,908 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LINGO2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1038,026,962 - 38,028,782 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11036,741,209 - 38,031,139 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Lingo2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473632,186,995 - 32,203,250 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473632,177,085 - 33,454,296 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in LINGO2
106 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000050348] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:204193-38815478)x3 copy number gain See cases [RCV000050357] Chr9:204193..38815478 [GRCh38]
Chr9:204193..38815475 [GRCh37]
Chr9:194193..38805475 [NCBI36]
Chr9:9p24.3-13.1
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters
GRCh38/hg38 9p24.3-13.1(chr9:204193-38741440)x3 copy number gain See cases [RCV000051106] Chr9:204193..38741440 [GRCh38]
Chr9:204193..38741437 [GRCh37]
Chr9:194193..38731437 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:203993-38815619)x3 copy number gain See cases [RCV000053703] Chr9:203993..38815619 [GRCh38]
Chr9:203993..38815616 [GRCh37]
Chr9:193993..38805616 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-13.3(chr9:204193-34599437)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053706]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053706]|See cases [RCV000053706] Chr9:204193..34599437 [GRCh38]
Chr9:204193..34599435 [GRCh37]
Chr9:194193..34589435 [NCBI36]
Chr9:9p24.3-13.3
pathogenic
GRCh38/hg38 9p24.3-13.3(chr9:204193-33284638)x3 copy number gain See cases [RCV000053707] Chr9:204193..33284638 [GRCh38]
Chr9:204193..33284636 [GRCh37]
Chr9:194193..33274636 [NCBI36]
Chr9:9p24.3-13.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124532)x3 copy number gain See cases [RCV000053745] Chr9:193412..138124532 [GRCh38]
Chr9:204193..141018984 [GRCh37]
Chr9:194193..140138805 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3 copy number gain See cases [RCV000053746] Chr9:193412..138114463 [GRCh38]
Chr9:214367..141008915 [GRCh37]
Chr9:204367..140128736 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:220253-38815419)x3 copy number gain See cases [RCV000053747] Chr9:220253..38815419 [GRCh38]
Chr9:220253..38815416 [GRCh37]
Chr9:210253..38805416 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|See cases [RCV000053748] Chr9:193412..138179445 [GRCh38]
Chr9:266045..141073897 [GRCh37]
Chr9:256045..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p23-21.1(chr9:9543538-30266463)x3 copy number gain See cases [RCV000053749] Chr9:9543538..30266463 [GRCh38]
Chr9:9543538..30266461 [GRCh37]
Chr9:9533538..30256461 [NCBI36]
Chr9:9p23-21.1
pathogenic
GRCh38/hg38 9p23-13.3(chr9:13526091-34261642)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053750]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053750]|See cases [RCV000053750] Chr9:13526091..34261642 [GRCh38]
Chr9:13526090..34261640 [GRCh37]
Chr9:13516090..34251640 [NCBI36]
Chr9:9p23-13.3
pathogenic
NM_001258282.1(LINGO2):c.-36+132555C>A single nucleotide variant Lung cancer [RCV000108273] Chr9:28162653 [GRCh38]
Chr9:28162651 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-36+118573A>T single nucleotide variant Lung cancer [RCV000108274] Chr9:28176635 [GRCh38]
Chr9:28176633 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-194-24057A>G single nucleotide variant Lung cancer [RCV000108275] Chr9:28319423 [GRCh38]
Chr9:28319421 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-195+10527T>A single nucleotide variant Lung cancer [RCV000108276] Chr9:28362309 [GRCh38]
Chr9:28362307 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-313-50188C>T single nucleotide variant Lung cancer [RCV000108277] Chr9:28526213 [GRCh38]
Chr9:28526211 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-314+20605A>C single nucleotide variant Lung cancer [RCV000108278] Chr9:28649595 [GRCh38]
Chr9:28649593 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-394-96138A>T single nucleotide variant Lung cancer [RCV000108279] Chr9:28766418 [GRCh38]
Chr9:28766416 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-395+64982T>A single nucleotide variant Lung cancer [RCV000108280] Chr9:28882836 [GRCh38]
Chr9:28882834 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.1(LINGO2):c.-492+60868A>G single nucleotide variant Lung cancer [RCV000108281] Chr9:29152054 [GRCh38]
Chr9:29152052 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445) copy number gain See cases [RCV000133791] Chr9:204193..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p21.1(chr9:28191463-28320733)x1 copy number loss See cases [RCV000134374] Chr9:28191463..28320733 [GRCh38]
Chr9:28191461..28320731 [GRCh37]
Chr9:28181461..28310731 [NCBI36]
Chr9:9p21.1
benign
GRCh38/hg38 9p24.3-21.1(chr9:220257-29424848)x3 copy number gain See cases [RCV000134037] Chr9:220257..29424848 [GRCh38]
Chr9:220257..29424846 [GRCh37]
Chr9:210257..29414846 [NCBI36]
Chr9:9p24.3-21.1
pathogenic
GRCh38/hg38 9p24.3-q21.11(chr9:13997-68401065)x3 copy number gain See cases [RCV000135344] Chr9:13997..68401065 [GRCh38]
Chr9:13997..71015981 [GRCh37]
Chr9:3997..70205801 [NCBI36]
Chr9:9p24.3-q21.11
pathogenic
GRCh38/hg38 9p21.1(chr9:28648339-28932452)x1 copy number loss See cases [RCV000134884] Chr9:28648339..28932452 [GRCh38]
Chr9:28648337..28932450 [GRCh37]
Chr9:28638337..28922450 [NCBI36]
Chr9:9p21.1
likely benign
GRCh38/hg38 9p21.1(chr9:28604285-28718397)x1 copy number loss See cases [RCV000135065] Chr9:28604285..28718397 [GRCh38]
Chr9:28604283..28718395 [GRCh37]
Chr9:28594283..28708395 [NCBI36]
Chr9:9p21.1
benign|likely benign|conflicting data from submitters
GRCh38/hg38 9p24.3-q21.12(chr9:193412-70630731)x3 copy number gain See cases [RCV000136152] Chr9:193412..70630731 [GRCh38]
Chr9:220253..73245647 [GRCh37]
Chr9:210253..72435467 [NCBI36]
Chr9:9p24.3-q21.12
pathogenic
GRCh38/hg38 9p24.3-q21.13(chr9:193412-74615913)x3 copy number gain See cases [RCV000135954] Chr9:193412..74615913 [GRCh38]
Chr9:204193..77230829 [GRCh37]
Chr9:194193..76420649 [NCBI36]
Chr9:9p24.3-q21.13
pathogenic
GRCh38/hg38 9p21.1(chr9:28648339-29040540)x1 copy number loss See cases [RCV000137533] Chr9:28648339..29040540 [GRCh38]
Chr9:28648337..29040538 [GRCh37]
Chr9:28638337..29030538 [NCBI36]
Chr9:9p21.1
likely benign|uncertain significance
GRCh38/hg38 9p24.1-13.2(chr9:7162304-37038771)x3 copy number gain See cases [RCV000137741] Chr9:7162304..37038771 [GRCh38]
Chr9:7162304..37038768 [GRCh37]
Chr9:7152304..37028768 [NCBI36]
Chr9:9p24.1-13.2
pathogenic
GRCh38/hg38 9p24.3-q21.11(chr9:204104-66233120)x4 copy number gain See cases [RCV000137888] Chr9:204104..66233120 [GRCh38]
Chr9:204104..47212321 [GRCh37]
Chr9:194104..47002141 [NCBI36]
Chr9:9p24.3-q21.11
pathogenic|conflicting data from submitters
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3 copy number gain See cases [RCV000138783] Chr9:193412..138124524 [GRCh38]
Chr9:204090..141018976 [GRCh37]
Chr9:194090..140138797 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q21.11(chr9:204104-67549861)x3 copy number gain See cases [RCV000139208] Chr9:204104..67549861 [GRCh38]
Chr9:204104..66516698 [GRCh37]
Chr9:194104..66256518 [NCBI36]
Chr9:9p24.3-q21.11
pathogenic
GRCh38/hg38 9p24.3-13.3(chr9:204104-34151476)x3 copy number gain See cases [RCV000139015] Chr9:204104..34151476 [GRCh38]
Chr9:204104..34151474 [GRCh37]
Chr9:194104..34141474 [NCBI36]
Chr9:9p24.3-13.3
pathogenic|likely benign
GRCh38/hg38 9p24.3-13.1(chr9:204104-38768294)x3 copy number gain See cases [RCV000139126] Chr9:204104..38768294 [GRCh38]
Chr9:204104..38768291 [GRCh37]
Chr9:194104..38758291 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000138962] Chr9:193412..138159073 [GRCh38]
Chr9:204104..141053525 [GRCh37]
Chr9:194104..140173346 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic|conflicting data from submitters
GRCh38/hg38 9p22.2-q21.11(chr9:18344605-68257015) copy number gain See cases [RCV000140448] Chr9:18344605..68257015 [GRCh38]
Chr9:18344603..68995221 [GRCh37]
Chr9:18334603..68285041 [NCBI36]
Chr9:9p22.2-q21.11
pathogenic
GRCh38/hg38 9p22.1-21.1(chr9:19564275-28106622)x1 copy number loss See cases [RCV000139905] Chr9:19564275..28106622 [GRCh38]
Chr9:19564273..28106620 [GRCh37]
Chr9:19554273..28096620 [NCBI36]
Chr9:9p22.1-21.1
pathogenic
GRCh38/hg38 9p24.3-21.2(chr9:204104-27963369)x3 copy number gain See cases [RCV000139621] Chr9:204104..27963369 [GRCh38]
Chr9:204104..27963367 [GRCh37]
Chr9:194104..27953367 [NCBI36]
Chr9:9p24.3-21.2
pathogenic
GRCh38/hg38 9p21.1(chr9:28082558-28648398)x3 copy number gain See cases [RCV000140830] Chr9:28082558..28648398 [GRCh38]
Chr9:28082556..28648396 [GRCh37]
Chr9:28072556..28638396 [NCBI36]
Chr9:9p21.1
likely benign|uncertain significance
GRCh38/hg38 9p24.3-q22.1(chr9:203861-88130444)x4 copy number gain See cases [RCV000141904] Chr9:203861..88130444 [GRCh38]
Chr9:203861..90745359 [GRCh37]
Chr9:193861..89935179 [NCBI36]
Chr9:9p24.3-q22.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3 copy number gain See cases [RCV000141876] Chr9:203861..138125937 [GRCh38]
Chr9:203861..141020389 [GRCh37]
Chr9:193861..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p21.1(chr9:28030643-28378184)x1 copy number loss See cases [RCV000141853] Chr9:28030643..28378184 [GRCh38]
Chr9:28030641..28378182 [GRCh37]
Chr9:28020641..28368182 [NCBI36]
Chr9:9p21.1
uncertain significance
GRCh38/hg38 9p21.1(chr9:28670180-28745048)x1 copy number loss See cases [RCV000141595] Chr9:28670180..28745048 [GRCh38]
Chr9:28670178..28745046 [GRCh37]
Chr9:28660178..28735046 [NCBI36]
Chr9:9p21.1
benign
GRCh38/hg38 9p24.3-21.1(chr9:203861-31423873)x4 copy number gain See cases [RCV000141662] Chr9:203861..31423873 [GRCh38]
Chr9:203861..31423871 [GRCh37]
Chr9:193861..31413871 [NCBI36]
Chr9:9p24.3-21.1
pathogenic
GRCh38/hg38 9p21.1-13.1(chr9:28975663-38787483)x3 copy number gain See cases [RCV000142317] Chr9:28975663..38787483 [GRCh38]
Chr9:28975661..38787480 [GRCh37]
Chr9:28965661..38777480 [NCBI36]
Chr9:9p21.1-13.1
likely pathogenic
GRCh38/hg38 9p24.3-q21.31(chr9:193412-79877816)x3 copy number gain See cases [RCV000143012] Chr9:193412..79877816 [GRCh38]
Chr9:204104..82492731 [GRCh37]
Chr9:194104..81682551 [NCBI36]
Chr9:9p24.3-q21.31
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:203861-38381642) copy number gain See cases [RCV000143411] Chr9:203861..38381642 [GRCh38]
Chr9:203861..38381639 [GRCh37]
Chr9:193861..38371639 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3 copy number gain See cases [RCV000143476] Chr9:203862..138125937 [GRCh38]
Chr9:203862..141020389 [GRCh37]
Chr9:193862..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000148113] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:204193-38815478)x3 copy number gain See cases [RCV000148159] Chr9:204193..38815478 [GRCh38]
Chr9:204193..38815475 [GRCh37]
Chr9:194193..38805475 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000139207] Chr9:193412..138159073 [GRCh38]
Chr9:68420641..141053525 [GRCh37]
Chr9:67910461..140173346 [NCBI36]
Chr9:9p11.2-q34.3
pathogenic
Single allele deletion Gestational diabetes mellitus uncontrolled [RCV000161568] Chr9:28309790..28342181 [GRCh38]
Chr9:28309788..28342179 [GRCh37]
Chr9:9p21.1
not provided
GRCh37/hg19 9p24.3-13.1(chr9:163131-38763958)x3 copy number gain See cases [RCV000240201] Chr9:163131..38763958 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p21.1(chr9:28195208-28336187)x1 copy number loss Premature ovarian failure [RCV000225209] Chr9:28195208..28336187 [GRCh38]
Chr9:28195206..28336185 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3 copy number gain See cases [RCV000240081] Chr9:163131..141122114 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-11.2(chr9:213161-47212321)x4 copy number gain See cases [RCV000240048] Chr9:213161..47212321 [GRCh37]
Chr9:9p24.3-11.2
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:213161-39092820)x3 copy number gain See cases [RCV000239869] Chr9:213161..39092820 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-68188391)x4 copy number gain See cases [RCV000449165] Chr9:203861..68188391 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407) copy number gain See cases [RCV000449375] Chr9:62525..141006407 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3 copy number gain not specified [RCV003986800] Chr9:203861..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:32396-39140211) copy number gain See cases [RCV000447246] Chr9:32396..39140211 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-67983174)x4 copy number gain See cases [RCV000446521] Chr9:203861..67983174 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-q21.11(chr9:13997-70919878)x4 copy number gain See cases [RCV000448242] Chr9:13997..70919878 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
GRCh37/hg19 9p24.3-q21.11(chr9:203861-69002883)x3 copy number gain See cases [RCV000448569] Chr9:203861..69002883 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203864-141020389)x3 copy number gain See cases [RCV000448978] Chr9:203864..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p21.1(chr9:28543761-28848834)x1 copy number loss See cases [RCV000510498] Chr9:28543761..28848834 [GRCh37]
Chr9:9p21.1
likely benign
GRCh37/hg19 9p21.1(chr9:28427025-28725108)x1 copy number loss See cases [RCV000510293] Chr9:28427025..28725108 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p22.2-21.1(chr9:17684434-30889762)x3 copy number gain See cases [RCV000510665] Chr9:17684434..30889762 [GRCh37]
Chr9:9p22.2-21.1
pathogenic
GRCh37/hg19 9p24.1-21.1(chr9:5900425-30008330)x3 copy number gain See cases [RCV000510425] Chr9:5900425..30008330 [GRCh37]
Chr9:9p24.1-21.1
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:203861-38787480)x3 copy number gain See cases [RCV000510864] Chr9:203861..38787480 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p22.2-13.3(chr9:17132123-35567051)x3 copy number gain See cases [RCV000510986] Chr9:17132123..35567051 [GRCh37]
Chr9:9p22.2-13.3
pathogenic
NM_001258282.3(LINGO2):c.14C>T (p.Ala5Val) single nucleotide variant not specified [RCV004315733] Chr9:27950658 [GRCh38]
Chr9:27950656 [GRCh37]
Chr9:9p21.2
uncertain significance
GRCh37/hg19 9p21.1(chr9:28174369-29604517)x3 copy number gain See cases [RCV000512187] Chr9:28174369..29604517 [GRCh37]
Chr9:9p21.1
likely benign
GRCh37/hg19 9p21.1(chr9:28303003-28509732)x1 copy number loss See cases [RCV000512378] Chr9:28303003..28509732 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p24.3-q21.33(chr9:203861-88189913)x3 copy number gain See cases [RCV000512431] Chr9:203861..88189913 [GRCh37]
Chr9:9p24.3-q21.33
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389) copy number gain See cases [RCV000512392] Chr9:203862..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-11.2(chr9:204193-44259464)x4 copy number gain Syndromic hydrocephalus due to diffuse villous hyperplasia of choroid plexus [RCV000677299] Chr9:204193..44259464 [GRCh37]
Chr9:9p24.3-11.2
likely pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-68262804)x3,4 copy number gain not provided [RCV000683174] Chr9:203861..68262804 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p21.1(chr9:28018586-28262531)x4 copy number gain not provided [RCV000683104] Chr9:28018586..28262531 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p24.3-13.1(chr9:203861-38787480)x3 copy number gain not provided [RCV000683172] Chr9:203861..38787480 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q21.12(chr9:203861-72717793)x3 copy number gain not provided [RCV000683176] Chr9:203861..72717793 [GRCh37]
Chr9:9p24.3-q21.12
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-67983174)x4 copy number gain not provided [RCV000683173] Chr9:203861..67983174 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-q21.11(chr9:203861-70985795)x4 copy number gain not provided [RCV000683175] Chr9:203861..70985795 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
Single allele complex Glioma [RCV000754871] Chr9:23524426..87359888 [GRCh37]
Chr9:9p21.3-q21.33
likely pathogenic
GRCh37/hg19 9p21.2-21.1(chr9:27962010-28002851)x3 copy number gain not provided [RCV000748342] Chr9:27962010..28002851 [GRCh37]
Chr9:9p21.2-21.1
benign
GRCh37/hg19 9p21.2-21.1(chr9:27962075-28013298)x3 copy number gain not provided [RCV000748343] Chr9:27962075..28013298 [GRCh37]
Chr9:9p21.2-21.1
benign
GRCh37/hg19 9p21.1(chr9:28048951-28053556)x1 copy number loss not provided [RCV000748344] Chr9:28048951..28053556 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28048951-28053878)x1 copy number loss not provided [RCV000748345] Chr9:28048951..28053878 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28077641-28079052)x1 copy number loss not provided [RCV000748346] Chr9:28077641..28079052 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28190379-28341892)x1 copy number loss not provided [RCV000748347] Chr9:28190379..28341892 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28190379-28342179)x1 copy number loss not provided [RCV000748348] Chr9:28190379..28342179 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28194546-28342179)x1 copy number loss not provided [RCV000748349] Chr9:28194546..28342179 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28562149-28571014)x1 copy number loss not provided [RCV000748350] Chr9:28562149..28571014 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28587832-28759983)x1 copy number loss not provided [RCV000748351] Chr9:28587832..28759983 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28587994-28623637)x1 copy number loss not provided [RCV000748352] Chr9:28587994..28623637 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28599107-28806129)x1 copy number loss not provided [RCV000748353] Chr9:28599107..28806129 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28677376-28787049)x1 copy number loss not provided [RCV000748354] Chr9:28677376..28787049 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28840387-28847049)x1 copy number loss not provided [RCV000748355] Chr9:28840387..28847049 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:28845945-28847621)x1 copy number loss not provided [RCV000748356] Chr9:28845945..28847621 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:29013529-29054853)x3 copy number gain not provided [RCV000748357] Chr9:29013529..29054853 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:29092556-29096271)x3 copy number gain not provided [RCV000748358] Chr9:29092556..29096271 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p21.1(chr9:29092556-29105290)x0 copy number loss not provided [RCV000748359] Chr9:29092556..29105290 [GRCh37]
Chr9:9p21.1
benign
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141122247)x3 copy number gain not provided [RCV000748055] Chr9:10590..141122247 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141107672)x3 copy number gain not provided [RCV000748053] Chr9:10590..141107672 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:46587-141066491)x3 copy number gain not provided [RCV000748063] Chr9:46587..141066491 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141114095)x2 copy number gain not provided [RCV000748054] Chr9:10590..141114095 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
NM_001258282.3(LINGO2):c.973G>C (p.Val325Leu) single nucleotide variant not provided [RCV000899690] Chr9:27949699 [GRCh38]
Chr9:27949697 [GRCh37]
Chr9:9p21.2
benign
GRCh37/hg19 9p21.1(chr9:28620371-28975706)x1 copy number loss not provided [RCV001006234] Chr9:28620371..28975706 [GRCh37]
Chr9:9p21.1
likely benign
GRCh37/hg19 9p24.3-13.1(chr9:214309-39156958) copy number gain not provided [RCV000767644] Chr9:214309..39156958 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3 copy number gain not provided [RCV000845900] Chr9:203861..141020388 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p21.1(chr9:28588574-28766228)x1 copy number loss not provided [RCV000849347] Chr9:28588574..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28635167-28680869)x1 copy number loss not provided [RCV000849359] Chr9:28635167..28680869 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000849843] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28739852-28916553)x1 copy number loss not provided [RCV000849875] Chr9:28739852..28916553 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28761784)x1 copy number loss not provided [RCV000848383] Chr9:28586142..28761784 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:29057538-29244165)x1 copy number loss not provided [RCV000849614] Chr9:29057538..29244165 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000849926] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:29122523-29244165)x1 copy number loss not provided [RCV000848470] Chr9:29122523..29244165 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000848802] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28593228-28766228)x1 copy number loss not provided [RCV000849825] Chr9:28593228..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:29178486-29284164)x3 copy number gain not provided [RCV000846374] Chr9:29178486..29284164 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p24.3-13.1(chr9:203861-38472979)x3 copy number gain not provided [RCV000848175] Chr9:203861..38472979 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p21.1(chr9:28693056-28795502)x1 copy number loss not provided [RCV000846027] Chr9:28693056..28795502 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28620371-28742801)x1 copy number loss not provided [RCV000846228] Chr9:28620371..28742801 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28689311-28738160)x1 copy number loss not provided [RCV000847593] Chr9:28689311..28738160 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28588574-28766228)x1 copy number loss not provided [RCV000846020] Chr9:28588574..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000849635] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x3 copy number gain not provided [RCV000849145] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28603176-28769160)x1 copy number loss not provided [RCV000848703] Chr9:28603176..28769160 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000848709] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28673985-28824856)x1 copy number loss not provided [RCV000846168] Chr9:28673985..28824856 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000849256] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28183564-31526964)x1 copy number loss not provided [RCV001006233] Chr9:28183564..31526964 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000848894] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28593134-28766607)x1 copy number loss not provided [RCV000848911] Chr9:28593134..28766607 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766228)x1 copy number loss not provided [RCV000848923] Chr9:28586142..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28593228-28766228)x1 copy number loss not provided [RCV000849364] Chr9:28593228..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28513869-28812497)x1 copy number loss not provided [RCV000848978] Chr9:28513869..28812497 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28586142-28766607)x1 copy number loss not provided [RCV000849945] Chr9:28586142..28766607 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28588574-28766228)x1 copy number loss not provided [RCV000849467] Chr9:28588574..28766228 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28698216-28725108)x1 copy number loss not provided [RCV000847618] Chr9:28698216..28725108 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28189976-28347399)x1 copy number loss not provided [RCV000849619] Chr9:28189976..28347399 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28130036-28378182)x3 copy number gain not provided [RCV001006232] Chr9:28130036..28378182 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.2-21.1(chr9:27745383-28346159)x3 copy number gain not provided [RCV001006231] Chr9:27745383..28346159 [GRCh37]
Chr9:9p21.2-21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28975710-29298962)x3 copy number gain not provided [RCV000847627] Chr9:28975710..29298962 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p24.3-q13(chr9:203861-67986965)x3 copy number gain not provided [RCV000845815] Chr9:203861..67986965 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p21.2-21.1(chr9:27257570-31635608)x1 copy number loss not provided [RCV002472786] Chr9:27257570..31635608 [GRCh37]
Chr9:9p21.2-21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28885984-29088636)x1 copy number loss not provided [RCV001006235] Chr9:28885984..29088636 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p24.3-q21.11(chr9:203861-70984588)x3 copy number gain not provided [RCV001006167] Chr9:203861..70984588 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
GRCh37/hg19 9p21.1(chr9:28937299-29198547)x3 copy number gain not provided [RCV001259517] Chr9:28937299..29198547 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p24.3-q13(chr9:203861-67986965) copy number gain Tetrasomy 9p [RCV002280656] Chr9:203861..67986965 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p21.1(chr9:28492136-28818016)x1 copy number loss not provided [RCV001259515] Chr9:28492136..28818016 [GRCh37]
Chr9:9p21.1
likely benign
GRCh37/hg19 9p21.1(chr9:29129023-29202522)x1 copy number loss not provided [RCV001259516] Chr9:29129023..29202522 [GRCh37]
Chr9:9p21.1
likely benign
GRCh37/hg19 9p21.1(chr9:28737913-29702414)x1 copy number loss not provided [RCV001259518] Chr9:28737913..29702414 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.3(LINGO2):c.-228+12976_-227-20514del deletion Megacolon [RCV001290059] Chr9:28393382..28462964 [GRCh38]
Chr9:28393380..28462962 [GRCh37]
Chr9:9p21.1
uncertain significance
NC_000009.11:g.12246100_101559378inv inversion Recurrent spontaneous abortion [RCV000999471] Chr9:12246100..101559378 [GRCh37]
Chr9:9p23-q22.33
likely pathogenic
GRCh37/hg19 9p24.3-q21.32(chr9:203861-84155399) copy number gain not specified [RCV002053820] Chr9:203861..84155399 [GRCh37]
Chr9:9p24.3-q21.32
pathogenic
GRCh37/hg19 9p24.3-13.3(chr9:676264-33743670) copy number gain not specified [RCV002053827] Chr9:676264..33743670 [GRCh37]
Chr9:9p24.3-13.3
pathogenic
GRCh37/hg19 9p21.2-21.1(chr9:27348149-29866026) copy number gain not specified [RCV002053850] Chr9:27348149..29866026 [GRCh37]
Chr9:9p21.2-21.1
uncertain significance
GRCh37/hg19 9p24.3-13.1(chr9:203861-38787480) copy number gain not specified [RCV002053818] Chr9:203861..38787480 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:353349-141020389) copy number gain not specified [RCV002053823] Chr9:353349..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p21.1(chr9:28905419-28981481)x1 copy number loss not provided [RCV001834194] Chr9:28905419..28981481 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.3-21.1(chr9:22003967-30712948) copy number loss not specified [RCV002053848] Chr9:22003967..30712948 [GRCh37]
Chr9:9p21.3-21.1
uncertain significance
GRCh37/hg19 9p21.2(chr9:27408331-27983086)x3 copy number gain not provided [RCV001836492] Chr9:27408331..27983086 [GRCh37]
Chr9:9p21.2
uncertain significance
GRCh37/hg19 9p24.3-q21.11(chr9:203861-69002883) copy number gain not specified [RCV002053819] Chr9:203861..69002883 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-68342786) copy number gain Bradycardia [RCV002280662] Chr9:203861..68342786 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-q34.11(chr9:203861-131603223)x3 copy number gain See cases [RCV002292402] Chr9:203861..131603223 [GRCh37]
Chr9:9p24.3-q34.11
pathogenic
GRCh37/hg19 9p24.3-13.3(chr9:203861-35903398)x3 copy number gain MISSED ABORTION [RCV002282974] Chr9:203861..35903398 [GRCh37]
Chr9:9p24.3-13.3
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:48827-39154913)x3 copy number gain Syndromic anorectal malformation [RCV002286608] Chr9:48827..39154913 [GRCh37]
Chr9:9p24.3-13.1
likely pathogenic
GRCh37/hg19 9p22.1-q33.1(chr9:19356861-119513311) copy number loss Distal tetrasomy 15q [RCV002280776] Chr9:19356861..119513311 [GRCh37]
Chr9:9p22.1-q33.1
uncertain significance
GRCh37/hg19 9p21.2-21.1(chr9:27780310-28605043)x3 copy number gain not provided [RCV002474870] Chr9:27780310..28605043 [GRCh37]
Chr9:9p21.2-21.1
uncertain significance
GRCh37/hg19 9p21.2-21.1(chr9:27670414-28070014)x3 copy number gain not provided [RCV002474770] Chr9:27670414..28070014 [GRCh37]
Chr9:9p21.2-21.1
uncertain significance
NM_001258282.3(LINGO2):c.1724A>G (p.Asn575Ser) single nucleotide variant not specified [RCV004222961] Chr9:27948948 [GRCh38]
Chr9:27948946 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1594A>G (p.Asn532Asp) single nucleotide variant not specified [RCV004192069] Chr9:27949078 [GRCh38]
Chr9:27949076 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.358G>C (p.Val120Leu) single nucleotide variant not specified [RCV004166787] Chr9:27950314 [GRCh38]
Chr9:27950312 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.486C>A (p.Asp162Glu) single nucleotide variant not specified [RCV004158674] Chr9:27950186 [GRCh38]
Chr9:27950184 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1730T>C (p.Ile577Thr) single nucleotide variant not specified [RCV004164255] Chr9:27948942 [GRCh38]
Chr9:27948940 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.308A>G (p.Asn103Ser) single nucleotide variant not specified [RCV004071571] Chr9:27950364 [GRCh38]
Chr9:27950362 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1097T>C (p.Ile366Thr) single nucleotide variant not specified [RCV004230635] Chr9:27949575 [GRCh38]
Chr9:27949573 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.377C>T (p.Thr126Met) single nucleotide variant not specified [RCV004143287] Chr9:27950295 [GRCh38]
Chr9:27950293 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.642C>G (p.Asn214Lys) single nucleotide variant not specified [RCV004101631] Chr9:27950030 [GRCh38]
Chr9:27950028 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1748C>T (p.Pro583Leu) single nucleotide variant not specified [RCV004268062] Chr9:27948924 [GRCh38]
Chr9:27948922 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.332G>A (p.Arg111His) single nucleotide variant not specified [RCV004274079] Chr9:27950340 [GRCh38]
Chr9:27950338 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1695G>A (p.Val565=) single nucleotide variant not provided [RCV003425645] Chr9:27948977 [GRCh38]
Chr9:27948975 [GRCh37]
Chr9:9p21.2
likely benign
NM_001258282.3(LINGO2):c.427A>C (p.Ile143Leu) single nucleotide variant not specified [RCV004345474] Chr9:27950245 [GRCh38]
Chr9:27950243 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1438A>G (p.Met480Val) single nucleotide variant not specified [RCV004335006] Chr9:27949234 [GRCh38]
Chr9:27949232 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.908A>G (p.His303Arg) single nucleotide variant not specified [RCV004354382] Chr9:27949764 [GRCh38]
Chr9:27949762 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1004C>G (p.Thr335Ser) single nucleotide variant not specified [RCV004354072] Chr9:27949668 [GRCh38]
Chr9:27949666 [GRCh37]
Chr9:9p21.2
uncertain significance
GRCh37/hg19 9p24.3-13.1(chr9:1475882-38771831)x3 copy number gain not provided [RCV003484765] Chr9:1475882..38771831 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p21.1(chr9:28257648-28585960)x1 copy number loss not provided [RCV003483064] Chr9:28257648..28585960 [GRCh37]
Chr9:9p21.1
uncertain significance
GRCh37/hg19 9p21.1(chr9:28698217-29061610)x1 copy number loss not provided [RCV003483065] Chr9:28698217..29061610 [GRCh37]
Chr9:9p21.1
uncertain significance
NM_001258282.3(LINGO2):c.1349G>C (p.Arg450Pro) single nucleotide variant not specified [RCV004415360] Chr9:27949323 [GRCh38]
Chr9:27949321 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.53T>G (p.Val18Gly) single nucleotide variant not specified [RCV004415364] Chr9:27950619 [GRCh38]
Chr9:27950617 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1166G>A (p.Arg389His) single nucleotide variant not specified [RCV004415359] Chr9:27949506 [GRCh38]
Chr9:27949504 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.284A>G (p.Asn95Ser) single nucleotide variant not specified [RCV004415363] Chr9:27950388 [GRCh38]
Chr9:27950386 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.12G>A (p.Thr4=) single nucleotide variant not provided [RCV003884871] Chr9:27950660 [GRCh38]
Chr9:27950658 [GRCh37]
Chr9:9p21.2
likely benign
NM_001258282.3(LINGO2):c.176C>T (p.Thr59Ile) single nucleotide variant not specified [RCV004415362] Chr9:27950496 [GRCh38]
Chr9:27950494 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.881C>G (p.Ser294Cys) single nucleotide variant not specified [RCV004415365] Chr9:27949791 [GRCh38]
Chr9:27949789 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1533G>A (p.Ala511=) single nucleotide variant not specified [RCV004415361] Chr9:27949139 [GRCh38]
Chr9:27949137 [GRCh37]
Chr9:9p21.2
likely benign
NM_001258282.3(LINGO2):c.1789G>A (p.Gly597Arg) single nucleotide variant not specified [RCV004634004] Chr9:27948883 [GRCh38]
Chr9:27948881 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1391G>A (p.Gly464Asp) single nucleotide variant not specified [RCV004634005] Chr9:27949281 [GRCh38]
Chr9:27949279 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1406A>G (p.Glu469Gly) single nucleotide variant not specified [RCV004642595] Chr9:27949266 [GRCh38]
Chr9:27949264 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.373T>A (p.Phe125Ile) single nucleotide variant not specified [RCV004642597] Chr9:27950299 [GRCh38]
Chr9:27950297 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.148G>T (p.Ala50Ser) single nucleotide variant not specified [RCV004642596] Chr9:27950524 [GRCh38]
Chr9:27950522 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.210A>T (p.Lys70Asn) single nucleotide variant not specified [RCV004942019] Chr9:27950462 [GRCh38]
Chr9:27950460 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.962G>A (p.Arg321His) single nucleotide variant not specified [RCV004942020] Chr9:27949710 [GRCh38]
Chr9:27949708 [GRCh37]
Chr9:9p21.2
uncertain significance
GRCh37/hg19 9p21.2-21.1(chr9:27292703-28140215)x3 copy number gain not provided [RCV004819543] Chr9:27292703..28140215 [GRCh37]
Chr9:9p21.2-21.1
uncertain significance
NM_001258282.3(LINGO2):c.511A>G (p.Arg171Gly) single nucleotide variant not specified [RCV004942015] Chr9:27950161 [GRCh38]
Chr9:27950159 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.1238G>A (p.Arg413His) single nucleotide variant not specified [RCV004942017] Chr9:27949434 [GRCh38]
Chr9:27949432 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.856A>G (p.Ser286Gly) single nucleotide variant not specified [RCV004942016] Chr9:27949816 [GRCh38]
Chr9:27949814 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.16A>T (p.Ile6Leu) single nucleotide variant not specified [RCV004935010] Chr9:27950656 [GRCh38]
Chr9:27950654 [GRCh37]
Chr9:9p21.2
uncertain significance
NM_001258282.3(LINGO2):c.941C>T (p.Pro314Leu) single nucleotide variant not specified [RCV004935009] Chr9:27949731 [GRCh38]
Chr9:27949729 [GRCh37]
Chr9:9p21.2
uncertain significance
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:479
Count of miRNA genes:332
Interacting mature miRNAs:350
Transcripts:ENST00000308675, ENST00000379992, ENST00000493941
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597135766GWAS1231840_Hsmoking initiation QTL GWAS1231840 (human)4e-12smoking initiation92916225529162256Human
597266843GWAS1362917_Hhigh density lipoprotein cholesterol measurement QTL GWAS1362917 (human)3e-14high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841068528410686Human
596958096GWAS1077615_Hmetabolic syndrome QTL GWAS1077615 (human)2e-11metabolic syndrome92894146128941462Human
597021587GWAS1117661_Hgranulocyte colony-stimulating factor measurement QTL GWAS1117661 (human)0.0000006cytokine amount (VT:0008713)92910680729106808Human
597095326GWAS1191400_Hinfluenza A (H1N1) QTL GWAS1191400 (human)2e-10influenza A (H1N1)92839533428395335Human
597579671GWAS1636531_Hhigh density lipoprotein cholesterol measurement QTL GWAS1636531 (human)6e-13high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92842551728425518Human
596951941GWAS1071460_Hbody mass index QTL GWAS1071460 (human)6e-11body mass index92841068528410686Human
597114245GWAS1210319_Hcoffee consumption measurement QTL GWAS1210319 (human)0.0000001coffee consumption measurement92795372627953727Human
596958093GWAS1077612_Hmetabolic syndrome QTL GWAS1077612 (human)3e-46metabolic syndrome92841434128414342Human
596958094GWAS1077613_Hmetabolic syndrome QTL GWAS1077613 (human)1e-09metabolic syndrome92841757428417575Human
596958095GWAS1077614_Hmetabolic syndrome QTL GWAS1077614 (human)4e-10metabolic syndrome92854437728544378Human
597026697GWAS1122771_Hbody mass index QTL GWAS1122771 (human)4e-41body mass indexbody mass index (BMI) (CMO:0000105)92841346328413464Human
597064586GWAS1160660_Hphysical activity measurement, body mass index QTL GWAS1160660 (human)8e-12wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597047176GWAS1143250_Hneuroticism measurement QTL GWAS1143250 (human)5e-08neuroticism measurement92868516928685170Human
597065609GWAS1161683_Hbody mass index QTL GWAS1161683 (human)1e-11body mass indexbody mass index (BMI) (CMO:0000105)92841551428415515Human
597289914GWAS1385988_Hbody weight QTL GWAS1385988 (human)8e-18body mass (VT:0001259)body weight (CMO:0000012)92841068528410686Human
597232061GWAS1328135_Hneuroticism measurement QTL GWAS1328135 (human)4e-08neuroticism measurement92866729528667296Human
597232060GWAS1328134_Hneuroticism measurement QTL GWAS1328134 (human)8e-09neuroticism measurement92860787928607880Human
597206965GWAS1303039_Hprotein measurement QTL GWAS1303039 (human)4e-11protein measurement92880992628809927Human
597047225GWAS1143299_Hneuroticism measurement QTL GWAS1143299 (human)2e-08neuroticism measurement92870888528708886Human
597064612GWAS1160686_Hbody mass index QTL GWAS1160686 (human)9e-09body mass indexbody mass index (BMI) (CMO:0000105)92841551428415515Human
597064098GWAS1160172_Hsmoking behavior, body mass index QTL GWAS1160172 (human)0.000007smoking behavior, body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597064096GWAS1160170_Hsmoking behavior, body mass index QTL GWAS1160170 (human)9e-10smoking behavior, body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597064097GWAS1160171_Hsmoking behavior, body mass index QTL GWAS1160171 (human)3e-13body mass index92841434128414342Human
597070254GWAS1166328_Hsmoking behavior, body mass index QTL GWAS1166328 (human)2e-08smoking behavior, body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
407041026GWAS690002_Hbody mass index QTL GWAS690002 (human)7e-14body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
407116293GWAS765269_Hhigh density lipoprotein cholesterol measurement QTL GWAS765269 (human)7e-09high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841434128414342Human
597579734GWAS1636594_Htype 2 diabetes mellitus QTL GWAS1636594 (human)1e-28type 2 diabetes mellitus92841462728414628Human
597594582GWAS1651442_Hglucose measurement QTL GWAS1651442 (human)2e-14glucose measurementblood glucose level (CMO:0000046)92841462728414628Human
597293015GWAS1389089_Hbody mass index QTL GWAS1389089 (human)3e-38body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597194710GWAS1290784_Hvisuospatial function measurement QTL GWAS1290784 (human)0.000006visuospatial function measurement92914554429145545Human
597601739GWAS1658599_Htype 2 diabetes mellitus QTL GWAS1658599 (human)3e-34type 2 diabetes mellitus92841462728414628Human
2315898GLUCO191_HGlucose level QTL 191 (human)1.83Glucose level9528914931289149Human
597607874GWAS1664734_Hbody weight QTL GWAS1664734 (human)8e-13body mass (VT:0001259)body weight (CMO:0000012)92841434128414342Human
406940703GWAS589679_Hbrain aneurysm QTL GWAS589679 (human)4e-08brain aneurysm92851891328518914Human
407026726GWAS675702_Hserum IgG glycosylation measurement QTL GWAS675702 (human)0.000009serum IgG glycosylation measurement92818108728181088Human
597144563GWAS1240637_Hbody mass index QTL GWAS1240637 (human)2e-14body mass indexbody mass index (BMI) (CMO:0000105)92841068528410686Human
407146031GWAS795007_Hage at onset, alcohol dependence QTL GWAS795007 (human)0.000002age at onset, alcohol dependence92860014428600145Human
597152251GWAS1248325_Hfatty acid measurement, linoleic acid measurement QTL GWAS1248325 (human)6e-09fatty acid measurement, linoleic acid measurementblood free fatty acids level (CMO:0000117)92879040728790408Human
597270004GWAS1366078_Htype 2 diabetes mellitus QTL GWAS1366078 (human)8e-09type 2 diabetes mellitus92841068528410686Human
597608940GWAS1665800_Hbody weight QTL GWAS1665800 (human)2e-15body mass (VT:0001259)body weight (CMO:0000012)92842551728425518Human
597046752GWAS1142826_Halcoholic liver disease QTL GWAS1142826 (human)0.000004alcoholic liver disease92801060528010606Human
597607908GWAS1664768_Hbody weight QTL GWAS1664768 (human)3e-24body mass (VT:0001259)body weight (CMO:0000012)92841462728414628Human
597619682GWAS1676542_Hbody weight QTL GWAS1676542 (human)5e-30body mass (VT:0001259)body weight (CMO:0000012)92842551728425518Human
597206500GWAS1302574_Hwellbeing measurement QTL GWAS1302574 (human)1e-11wellness/fitness trait (VT:1000152)92860787928607880Human
597589985GWAS1646845_Htype 2 diabetes mellitus QTL GWAS1646845 (human)2e-17type 2 diabetes mellitus92841462728414628Human
597074705GWAS1170779_Hneuroticism measurement QTL GWAS1170779 (human)5e-14neuroticism measurement92857610828576109Human
597617942GWAS1674802_Hbody weight QTL GWAS1674802 (human)3e-29body mass (VT:0001259)body weight (CMO:0000012)92842551728425518Human
597081375GWAS1177449_Hserum IgG glycosylation measurement QTL GWAS1177449 (human)0.000004diffusing capacity of the lung for carbon monoxide92818108728181088Human
597587220GWAS1644080_Hdiabetes mellitus QTL GWAS1644080 (human)1e-11pancreas integrity trait (VT:0010560)92841462728414628Human
597605651GWAS1662511_Hbody weight QTL GWAS1662511 (human)3e-49body mass (VT:0001259)body weight (CMO:0000012)92841462728414628Human
597082392GWAS1178466_HSelf-injurious behavior QTL GWAS1178466 (human)0.0000005Self-injurious behavior92817761128177612Human
597598987GWAS1655847_HHbA1c measurement QTL GWAS1655847 (human)9e-20HbA1c measurementblood hemoglobin A1c level (CMO:0002786)92841462728414628Human
597049088GWAS1145162_Hneuroticism measurement QTL GWAS1145162 (human)3e-13neuroticism measurement92860427028604271Human
2293433PRSTS223_HProstate tumor susceptibility QTL 223 (human)1.6Prostate tumor susceptibility9528914931289149Human
407223006GWAS871982_Htype 2 diabetes mellitus QTL GWAS871982 (human)0.000008type 2 diabetes mellitus92877270228772703Human
597298433GWAS1394507_Hrevision of total knee arthroplasty QTL GWAS1394507 (human)2e-09revision of total knee arthroplasty92890309028903091Human
597619457GWAS1676317_Hlacrimal apparatus disease QTL GWAS1676317 (human)4e-13lacrimal apparatus disease92814413728144138Human
597075209GWAS1171283_Halcohol dependence measurement QTL GWAS1171283 (human)0.000002response to alcohol trait (VT:0010489)92840749428407495Human
597598977GWAS1655837_HHbA1c measurement QTL GWAS1655837 (human)1e-19HbA1c measurementblood hemoglobin A1c level (CMO:0002786)92842551728425518Human
597029684GWAS1125758_Hwaist-hip ratio QTL GWAS1125758 (human)4e-15waist-hip ratiowaist to hip ratio (WHR) (CMO:0000020)92841237728412378Human
597338430GWAS1434504_Hbody mass index QTL GWAS1434504 (human)1e-12body mass indexbody mass index (BMI) (CMO:0000105)92841851328418514Human
597062451GWAS1158525_Hphysical activity measurement, body mass index QTL GWAS1158525 (human)0.0000008wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597609273GWAS1666133_Hbody weight QTL GWAS1666133 (human)1e-58body mass (VT:0001259)body weight (CMO:0000012)92841462728414628Human
597608750GWAS1665610_Hbody mass index QTL GWAS1665610 (human)1e-15body mass indexbody mass index (BMI) (CMO:0000105)92842551728425518Human
597318440GWAS1414514_Heducational attainment QTL GWAS1414514 (human)3e-10educational attainment92794303927943040Human
597325609GWAS1421683_HAcute kidney injury QTL GWAS1421683 (human)0.000003Acute kidney injury92887987228879873Human
597082400GWAS1178474_HSelf-injurious behavior QTL GWAS1178474 (human)0.000004Self-injurious behavior92817492128174922Human
597274400GWAS1370474_Htriglyceride measurement QTL GWAS1370474 (human)6e-09triglyceride measurementblood triglyceride level (CMO:0000118)92841462728414628Human
2293400PRSTS224_HProstate tumor susceptibility QTL 224 (human)1.62Prostate tumor susceptibility9528914931289149Human
597595429GWAS1652289_Hbody mass index QTL GWAS1652289 (human)3e-60body mass (VT:0001259)body weight (CMO:0000012)92841462728414628Human
597088598GWAS1184672_Htype 2 diabetes mellitus QTL GWAS1184672 (human)4e-19type 2 diabetes mellitus92841068528410686Human
597592414GWAS1649274_Hhigh density lipoprotein cholesterol measurement QTL GWAS1649274 (human)5e-15high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841462728414628Human
597291354GWAS1387428_Hwellbeing measurement, employment status QTL GWAS1387428 (human)2e-08wellness/fitness trait (VT:1000152)92918739529187396Human
597265757GWAS1361831_Htriglyceride measurement QTL GWAS1361831 (human)4e-08triglyceride measurementblood triglyceride level (CMO:0000118)92841250228412503Human
596952401GWAS1071920_Hwaist circumference QTL GWAS1071920 (human)1e-11body mass index92841434128414342Human
597266783GWAS1362857_Hbody mass index QTL GWAS1362857 (human)0.0000002body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597266782GWAS1362856_Hbody mass index QTL GWAS1362856 (human)0.000007body mass indexbody mass index (BMI) (CMO:0000105)92841099828410999Human
597245778GWAS1341852_Hcoffee consumption measurement, neuroticism measurement QTL GWAS1341852 (human)4e-13coffee consumption measurement, neuroticism measurement92857447628574477Human
597579090GWAS1635950_Hovernutrition, obesity QTL GWAS1635950 (human)1e-18overnutrition, obesity92841462728414628Human
597595470GWAS1652330_Hbody mass index QTL GWAS1652330 (human)4e-60body mass indexbody mass index (BMI) (CMO:0000105)92841462728414628Human
597598543GWAS1655403_HHbA1c measurement QTL GWAS1655403 (human)3e-16HbA1c measurementblood hemoglobin A1c level (CMO:0002786)92842551728425518Human
597594444GWAS1651304_Hbody mass index QTL GWAS1651304 (human)3e-13smoking behavior, body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597065029GWAS1161103_Htriglyceride change measurement, response to simvastatin, response to fenofibrate QTL GWAS1161103 (human)0.0000004triglyceride change measurement, response to simvastatin, response to fenofibrateblood triglyceride level (CMO:0000118)92822716928227170Human
597094722GWAS1190796_Hschizophrenia QTL GWAS1190796 (human)0.000001schizophrenia92889181928891820Human
597601606GWAS1658466_Hbody mass index QTL GWAS1658466 (human)9e-34body mass indexbody mass index (BMI) (CMO:0000105)92842551728425518Human
597182273GWAS1278347_Hpyruvate measurement QTL GWAS1278347 (human)3e-10pyruvate measurementblood pyruvate level (CMO:0002422)92871711428717115Human
597082443GWAS1178517_HSelf-injurious behavior QTL GWAS1178517 (human)0.0000005Self-injurious behavior92817243828172439Human
597235014GWAS1331088_HIschemic stroke QTL GWAS1331088 (human)0.000005Ischemic stroke92919018029190181Human
597319034GWAS1415108_Hbody surface area QTL GWAS1415108 (human)5e-13body surface area92841462728414628Human
597082484GWAS1178558_HSelf-injurious behavior QTL GWAS1178558 (human)0.0000008Self-injurious behavior92817221928172220Human
407046318GWAS695294_Hbody mass index QTL GWAS695294 (human)0.000007body mass indexbody mass index (BMI) (CMO:0000105)92840204528402046Human
597069689GWAS1165763_Hdiastolic blood pressure QTL GWAS1165763 (human)0.0000005diastolic blood pressurediastolic blood pressure (CMO:0000005)92816567328165674Human
597291369GWAS1387443_Hhypertension QTL GWAS1387443 (human)2e-08hypertension92842532928425330Human
597172073GWAS1268147_Hbody mass index QTL GWAS1268147 (human)3e-21body mass indexbody mass index (BMI) (CMO:0000105)92841462728414628Human
1643245BW137_HBody weight QTL 137 (human)2.28Body weight9528914931289149Human
597064547GWAS1160621_Hphysical activity measurement, body mass index QTL GWAS1160621 (human)0.0000007wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597071727GWAS1167801_Hneuroticism measurement QTL GWAS1167801 (human)2e-09neuroticism measurement92871757528717576Human
597579620GWAS1636480_Hdiabetes mellitus QTL GWAS1636480 (human)2e-28pancreas integrity trait (VT:0010560)92841462728414628Human
597048683GWAS1144757_Hanxiety QTL GWAS1144757 (human)8e-09anxiety92871757528717576Human
597034856GWAS1130930_Htype 2 diabetes mellitus QTL GWAS1130930 (human)2e-10type 2 diabetes mellitus92841068528410686Human
597081236GWAS1177310_HSelf-injurious behavior QTL GWAS1177310 (human)0.0000007Self-injurious behavior92817595328175954Human
597064339GWAS1160413_Hphysical activity measurement, body mass index QTL GWAS1160413 (human)8e-08wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597084819GWAS1180893_Htype 2 diabetes mellitus QTL GWAS1180893 (human)5e-08type 2 diabetes mellitus92908943929089440Human
597094559GWAS1190633_H3-hydroxypropylmercapturic acid measurement QTL GWAS1190633 (human)0.00000093-hydroxypropylmercapturic acid measurement92802419628024197Human
597031583GWAS1127657_Hbody mass index QTL GWAS1127657 (human)2e-41body mass indexbody mass index (BMI) (CMO:0000105)92841208028412081Human
596955291GWAS1074810_Hbody mass index QTL GWAS1074810 (human)3e-38body mass index92841434128414342Human
597342357GWAS1438431_Hbody mass index QTL GWAS1438431 (human)1e-31body mass indexbody mass index (BMI) (CMO:0000105)92841462728414628Human
2302773MAMTS18_HMammary tumor susceptibility QTL 18 (human)0.039Mammary tumor susceptibility9528914931289149Human
597610120GWAS1666980_Hbody weight QTL GWAS1666980 (human)3e-15body mass (VT:0001259)body weight (CMO:0000012)92842551728425518Human
597098127GWAS1194201_Hprotein measurement QTL GWAS1194201 (human)1e-08protein measurement92904144229041443Human
597064372GWAS1160446_Hphysical activity measurement, body mass index QTL GWAS1160446 (human)0.0000006wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597259962GWAS1356036_Hclinical and behavioural ideal cardiovascular health QTL GWAS1356036 (human)5e-09clinical and behavioural ideal cardiovascular health92841551428415515Human
597598392GWAS1655252_Hhigh density lipoprotein cholesterol measurement QTL GWAS1655252 (human)1e-19high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841126628411267Human
597606582GWAS1663442_Hovernutrition, obesity QTL GWAS1663442 (human)3e-15overnutrition, obesity92841126628411267Human
597601463GWAS1658323_Hbody mass index QTL GWAS1658323 (human)1e-29body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597094587GWAS1190661_Hschizophrenia QTL GWAS1190661 (human)0.000008schizophrenia92916122029161221Human
597600944GWAS1657804_Hbody mass index QTL GWAS1657804 (human)4e-33body mass indexbody mass index (BMI) (CMO:0000105)92842551728425518Human
407074669GWAS723645_Hcognitive function measurement QTL GWAS723645 (human)0.000009cognitive behavior trait (VT:0010450)92881776828817769Human
597164205GWAS1260279_Hserum metabolite measurement QTL GWAS1260279 (human)0.000008serum metabolite measurement92825172028251721Human
597579945GWAS1636805_Hhigh density lipoprotein cholesterol measurement QTL GWAS1636805 (human)1e-12high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841126628411267Human
597608617GWAS1665477_Hmorbid obesity QTL GWAS1665477 (human)4e-13morbid obesity92841126628411267Human
597037736GWAS1133810_Hhigh density lipoprotein cholesterol measurement QTL GWAS1133810 (human)4e-09high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841068528410686Human
597588641GWAS1645501_Hglucose measurement QTL GWAS1645501 (human)4e-11glucose measurementblood glucose level (CMO:0000046)92842551728425518Human
597063849GWAS1159923_Hbody weight QTL GWAS1159923 (human)0.000006body mass (VT:0001259)body weight (CMO:0000012)92916378829163789Human
597024982GWAS1121056_Hacute myeloid leukemia QTL GWAS1121056 (human)2e-23leukocyte integrity trait (VT:0010898)92813736328137364Human
597240028GWAS1336102_Haspartate aminotransferase measurement, serum alanine aminotransferase measurement, low density lipoprotein triglyceride measurement, body fat percentage, high density lipoprotein cholesterol measurement, sex hormone-binding globulin measurement QTL GWAS1336102 (human)3e-14body fat mass (VT:0010482)blood high density lipoprotein cholesterol level (CMO:0000052)92841462728414628Human
597349596GWAS1445670_Hrestless legs syndrome QTL GWAS1445670 (human)1e-09restless legs syndrome92795372627953727Human
597075153GWAS1171227_Halcohol dependence measurement QTL GWAS1171227 (human)0.0000004response to alcohol trait (VT:0010489)92840749428407495Human
597349597GWAS1445671_Hrestless legs syndrome QTL GWAS1445671 (human)1e-11restless legs syndrome92899602028996023Human
597596375GWAS1653235_Hdiabetes mellitus, Drugs used in diabetes use measurement QTL GWAS1653235 (human)3e-13pancreas integrity trait (VT:0010560)92841462728414628Human
597065439GWAS1161513_Hphysical activity measurement, body mass index QTL GWAS1161513 (human)5e-13wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597036765GWAS1132839_Hbody mass index QTL GWAS1132839 (human)2e-32body mass indexbody mass index (BMI) (CMO:0000105)92842551728425518Human
597294293GWAS1390367_Haseptic loosening, revision of total knee arthroplasty QTL GWAS1390367 (human)5e-12aseptic loosening, revision of total knee arthroplasty92890309028903091Human
597074651GWAS1170725_Hbody mass index QTL GWAS1170725 (human)2e-08body mass indexbody mass index (BMI) (CMO:0000105)92841208028412081Human
597064923GWAS1160997_Hbody mass index QTL GWAS1160997 (human)3e-11body mass indexbody mass index (BMI) (CMO:0000105)92841551428415515Human
597024987GWAS1121061_Hacute myeloid leukemia QTL GWAS1121061 (human)5e-22leukocyte integrity trait (VT:0010898)92813736328137364Human
597019866GWAS1115940_Hbody mass index QTL GWAS1115940 (human)1e-16body mass indexbody mass index (BMI) (CMO:0000105)92841551428415515Human
597294294GWAS1390368_Haseptic loosening, revision of total knee arthroplasty QTL GWAS1390368 (human)2e-09aseptic loosening, revision of total knee arthroplasty92904085129040852Human
597039814GWAS1135888_Hapolipoprotein A 1 measurement QTL GWAS1135888 (human)4e-08apolipoprotein A 1 measurementblood apolipoprotein AI level (CMO:0000520)92843395528433956Human
407023379GWAS672355_Hobesity QTL GWAS672355 (human)3e-08high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841434128414342Human
597064388GWAS1160462_Hbody mass index QTL GWAS1160462 (human)0.0000006body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597064389GWAS1160463_Hbody mass index QTL GWAS1160463 (human)5e-10body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
407023377GWAS672353_Hobesity QTL GWAS672353 (human)2e-10obesity92842551728425518Human
597034689GWAS1130763_Hbody fat percentage QTL GWAS1130763 (human)6e-09body fat mass (VT:0010482)body fat percentage (CMO:0000302)92841551428415515Human
596952780GWAS1072299_Hbody mass index QTL GWAS1072299 (human)3e-13body mass index92841434128414342Human
597100749GWAS1196823_Hchronic obstructive pulmonary disease QTL GWAS1196823 (human)0.000009lung integrity trait (VT:0010906)92802683828026839Human
597048012GWAS1144086_Hneuroticism measurement QTL GWAS1144086 (human)2e-11neuroticism measurement92857510228575103Human
597064909GWAS1160983_Hphysical activity measurement, body mass index QTL GWAS1160983 (human)4e-12wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597272773GWAS1368847_Htype 2 diabetes mellitus QTL GWAS1368847 (human)1e-09type 2 diabetes mellitus92841068528410686Human
597605621GWAS1662481_HHbA1c measurement QTL GWAS1662481 (human)1e-27HbA1c measurementblood hemoglobin A1c level (CMO:0002786)92842551728425518Human
597048038GWAS1144112_Hneuroticism measurement QTL GWAS1144112 (human)3e-09neuroticism measurement92857729628577297Human
597074150GWAS1170224_Hneuroticism measurement QTL GWAS1170224 (human)2e-11neuroticism measurement92868226328682264Human
597209321GWAS1305395_HFacial wrinkling QTL GWAS1305395 (human)0.000004Facial wrinkling92821148928211490Human
597199082GWAS1295156_Hgestational age QTL GWAS1295156 (human)0.000001gestational age92860958228609583Human
597081314GWAS1177388_HSelf-injurious behavior QTL GWAS1177388 (human)0.0000006Self-injurious behavior92817567928175680Human
596952800GWAS1072319_Hhypertension QTL GWAS1072319 (human)2e-08hypertension92842532928425330Human
597081315GWAS1177389_HSelf-injurious behavior QTL GWAS1177389 (human)0.0000009Self-injurious behavior92817477428174775Human
406949172GWAS598148_Hbody mass index QTL GWAS598148 (human)2e-14body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597619947GWAS1676807_Hbody weight QTL GWAS1676807 (human)4e-18body mass (VT:0001259)body weight (CMO:0000012)92841851328418514Human
597245167GWAS1341241_Hhigh density lipoprotein cholesterol measurement QTL GWAS1341241 (human)8e-09high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841462728414628Human
597606121GWAS1662981_Hobesity QTL GWAS1662981 (human)2e-16obesity92841126628411267Human
597592294GWAS1649154_Hhigh density lipoprotein cholesterol measurement QTL GWAS1649154 (human)2e-18high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841126628411267Human
597037802GWAS1133876_Hbipolar disorder, body mass index QTL GWAS1133876 (human)3e-15bipolar disorder, body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597162730GWAS1258804_Hpeptide measurement QTL GWAS1258804 (human)0.000003peptide metabolism trait (VT:0010634)92838561428385615Human
597081110GWAS1177184_HSelf-injurious behavior QTL GWAS1177184 (human)0.000002Self-injurious behavior92818330128183302Human
407115205GWAS764181_Hbody fat percentage QTL GWAS764181 (human)0.000004body fat mass (VT:0010482)body fat percentage (CMO:0000302)92841551428415515Human
597065751GWAS1161825_Hphysical activity measurement, body mass index QTL GWAS1161825 (human)0.0000001wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597108246GWAS1204320_Hcocaine dependence QTL GWAS1204320 (human)0.000007cocaine dependence92896329128963292Human
597606425GWAS1663285_HHbA1c measurement QTL GWAS1663285 (human)7e-25HbA1c measurementblood hemoglobin A1c level (CMO:0002786)92842551728425518Human
597178376GWAS1274450_Hbody mass index QTL GWAS1274450 (human)4e-08body mass indexbody mass index (BMI) (CMO:0000105)92841757428417575Human
597178377GWAS1274451_Hbody mass index QTL GWAS1274451 (human)2e-11body mass indexbody mass index (BMI) (CMO:0000105)92844661028446611Human
597178378GWAS1274452_Hbody mass index QTL GWAS1274452 (human)4e-08body mass indexbody mass index (BMI) (CMO:0000105)92871050728710508Human
597178379GWAS1274453_Hbody mass index QTL GWAS1274453 (human)3e-10body mass indexbody mass index (BMI) (CMO:0000105)92894831028948311Human
597326863GWAS1422937_Hcolor vision disorder QTL GWAS1422937 (human)0.000005color vision disorder92873008228730083Human
597241870GWAS1337944_Hbody fat percentage QTL GWAS1337944 (human)2e-21body fat percentage92841462728414628Human
597178375GWAS1274449_Hbody mass index QTL GWAS1274449 (human)1e-42body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597019189GWAS1115263_Hbody mass index QTL GWAS1115263 (human)0.000005body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597072438GWAS1168512_Hneuroticism measurement QTL GWAS1168512 (human)3e-09neuroticism measurement92860787928607880Human
597095476GWAS1191550_Hinfluenza A (H1N1) QTL GWAS1191550 (human)9e-13influenza A (H1N1)92839533428395335Human
407055840GWAS704816_Htrauma exposure measurement QTL GWAS704816 (human)0.0000001trauma exposure measurement92904844229048443Human
597605947GWAS1662807_HHbA1c measurement QTL GWAS1662807 (human)1e-30HbA1c measurementblood hemoglobin A1c level (CMO:0002786)92842551728425518Human
406962151GWAS611127_Hendometrial neoplasm QTL GWAS611127 (human)0.000009endometrial neoplasm92858799628587997Human
407055340GWAS704316_Htrauma exposure measurement QTL GWAS704316 (human)0.000002trauma exposure measurement92800252528002526Human
597205544GWAS1301618_Hneuroticism measurement QTL GWAS1301618 (human)5e-08neuroticism measurement92863159728631598Human
597062180GWAS1158254_Hphysical activity measurement, body mass index QTL GWAS1158254 (human)0.0000002wellness/fitness trait (VT:1000152)body mass index (BMI) (CMO:0000105)92841551428415515Human
597209643GWAS1305717_Hcarotid atherosclerosis QTL GWAS1305717 (human)0.000005carotid atherosclerosis92914845129148452Human
597106722GWAS1202796_Hcerebellum white matter volume change measurement, age at assessment QTL GWAS1202796 (human)0.000008cerebellum white matter volume change measurement, age at assessment92888005428880055Human
597030947GWAS1127021_Hbody mass index QTL GWAS1127021 (human)3e-10body mass indexbody mass index (BMI) (CMO:0000105)92894146128941462Human
597058593GWAS1154667_Hvital capacity QTL GWAS1154667 (human)2e-10vital capacity92915347129153472Human
597047339GWAS1143413_Hneuroticism measurement QTL GWAS1143413 (human)2e-12neuroticism measurement92871724828717249Human
597100631GWAS1196705_Hbody mass index QTL GWAS1196705 (human)2e-10body mass indexbody mass index (BMI) (CMO:0000105)92847448628474487Human
597100630GWAS1196704_Hbody mass index QTL GWAS1196704 (human)2e-30body mass indexbody mass index (BMI) (CMO:0000105)92841227728412278Human
597031508GWAS1127582_HAlzheimer disease QTL GWAS1127582 (human)0.000002Alzheimer disease92875398428753985Human
597585494GWAS1642354_Hhigh density lipoprotein cholesterol measurement QTL GWAS1642354 (human)6e-14high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92842551728425518Human
597227090GWAS1323164_Hbody mass index QTL GWAS1323164 (human)7e-21body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597320789GWAS1416863_HSARS-CoV-2 antibody measurement, response to COVID-19 vaccine QTL GWAS1416863 (human)0.0000002SARS-CoV-2 antibody measurement, response to COVID-19 vaccineblood anti-SARS-CoV-2 antibody level (CMO:0003966)92877370128773702Human
597191240GWAS1287314_Hbody mass index QTL GWAS1287314 (human)9e-09body mass indexbody mass index (BMI) (CMO:0000105)92854437728544378Human
597191241GWAS1287315_Hbody mass index QTL GWAS1287315 (human)2e-14body mass indexbody mass index (BMI) (CMO:0000105)92894254028942541Human
597594690GWAS1651550_Hglucose measurement QTL GWAS1651550 (human)7e-20glucose measurementblood glucose level (CMO:0000046)92841462728414628Human
597191237GWAS1287311_Hbody mass index QTL GWAS1287311 (human)2e-75body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
597191238GWAS1287312_Hbody mass index QTL GWAS1287312 (human)7e-10body mass indexbody mass index (BMI) (CMO:0000105)92841757428417575Human
597621312GWAS1678172_Hbody weight QTL GWAS1678172 (human)2e-26body mass (VT:0001259)body weight (CMO:0000012)92842551728425518Human
597191239GWAS1287313_Hbody mass index QTL GWAS1287313 (human)3e-16body mass indexbody mass index (BMI) (CMO:0000105)92844661028446611Human
597160520GWAS1256594_Hxanthurenate measurement QTL GWAS1256594 (human)0.000005xanthurenate measurement92864562828645629Human
597081207GWAS1177281_HSelf-injurious behavior QTL GWAS1177281 (human)0.0000005Self-injurious behavior92817687028176871Human
407044000GWAS692976_HIGF-1 measurement QTL GWAS692976 (human)0.000002IGF-1 measurementblood insulin-like growth factor 1 level (CMO:0001297)92835978428359785Human
1357299AASTH47_HAllergic/atopic asthma related QTL 47 (human)0.00028Reversible airflow obstruction9528914931289149Human
597085809GWAS1181883_Htype 2 diabetes mellitus QTL GWAS1181883 (human)4e-21type 2 diabetes mellitus92841068528410686Human
597272702GWAS1368776_Hhigh density lipoprotein cholesterol measurement QTL GWAS1368776 (human)1e-10high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)92841068528410686Human
597025405GWAS1121479_Hbody mass index QTL GWAS1121479 (human)5e-08body mass indexbody mass index (BMI) (CMO:0000105)92841434128414342Human
406999464GWAS648440_Hresponse to olanzapine, concentration dose ratio QTL GWAS648440 (human)0.0000002response to olanzapine, concentration dose ratio92875248628752487Human
597313137GWAS1409211_Hvaginal microbiome measurement QTL GWAS1409211 (human)0.000007vaginal microbiome measurement92816874128168742Human
406989228GWAS638204_Hgestational age QTL GWAS638204 (human)0.000004gestational age92835998128359982Human
597595246GWAS1652106_Hbody mass index QTL GWAS1652106 (human)5e-48body mass indexbody mass index (BMI) (CMO:0000105)92841462728414628Human
597028452GWAS1124526_Hbody mass index QTL GWAS1124526 (human)4e-41body mass indexbody mass index (BMI) (CMO:0000105)92841237728412378Human
597590639GWAS1647499_Hdiabetes mellitus QTL GWAS1647499 (human)8e-18pancreas integrity trait (VT:0010560)92841462728414628Human
597578347GWAS1635207_Hobesity QTL GWAS1635207 (human)2e-21body fat mass (VT:0010482)body fat percentage (CMO:0000302)92841462728414628Human
597292142GWAS1388216_Hbody mass index QTL GWAS1388216 (human)6e-11body mass indexbody mass index (BMI) (CMO:0000105)92841068528410686Human
597049454GWAS1145528_Hmetabolic syndrome QTL GWAS1145528 (human)2e-11metabolic syndrome92894146128941462Human
597594215GWAS1651075_Hbody mass index QTL GWAS1651075 (human)4e-16body mass indexbody mass index (BMI) (CMO:0000105)92842551728425518Human
597049452GWAS1145526_Hmetabolic syndrome QTL GWAS1145526 (human)1e-09metabolic syndrome92841757428417575Human
597053548GWAS1149622_Hneuroticism measurement QTL GWAS1149622 (human)6e-11neuroticism measurement92860787928607880Human
597049453GWAS1145527_Hmetabolic syndrome QTL GWAS1145527 (human)4e-10metabolic syndrome92854437728544378Human
597049451GWAS1145525_Hmetabolic syndrome QTL GWAS1145525 (human)3e-46metabolic syndrome92841434128414342Human
596955753GWAS1075272_Hwellbeing measurement, employment status QTL GWAS1075272 (human)2e-08wellbeing measurement, employment status92918739529187396Human
597144680GWAS1240754_Hhigh density lipoprotein cholesterol measurement QTL GWAS1240754 (human)1e-09C-reactive protein measurementblood C-reactive protein level (CMO:0003160)92841434128414342Human

Markers in Region
D9S1678  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,355,190 - 28,355,421UniSTSGRCh37
Build 36928,345,190 - 28,345,421RGDNCBI36
Celera928,285,695 - 28,285,926RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,307,535 - 28,307,762UniSTS
Marshfield Genetic Map951.21RGD
Marshfield Genetic Map951.21UniSTS
Genethon Genetic Map950.3UniSTS
Whitehead-YAC Contig Map9 UniSTS
D9S270  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,404,862 - 28,404,948UniSTSGRCh37
GRCh37928,404,866 - 28,404,955UniSTSGRCh37
Build 36928,394,866 - 28,394,955RGDNCBI36
Celera928,335,375 - 28,335,472RGD
Celera928,335,371 - 28,335,465UniSTS
Cytogenetic Map9p21.2UniSTS
HuRef928,357,177 - 28,357,276UniSTS
HuRef928,357,173 - 28,357,269UniSTS
Marshfield Genetic Map951.21RGD
Genethon Genetic Map950.3UniSTS
TNG Radiation Hybrid Map915341.0UniSTS
deCODE Assembly Map952.79UniSTS
Stanford-G3 RH Map91067.0UniSTS
Whitehead-YAC Contig Map9 UniSTS
NCBI RH Map9295.9UniSTS
GeneMap99-G3 RH Map91114.0UniSTS
D9S1875  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,502,077 - 28,502,248UniSTSGRCh37
Build 36928,492,077 - 28,492,248RGDNCBI36
Celera928,432,597 - 28,432,770RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,454,425 - 28,454,598UniSTS
Marshfield Genetic Map951.21RGD
Marshfield Genetic Map951.21UniSTS
Genethon Genetic Map950.3UniSTS
Whitehead-YAC Contig Map9 UniSTS
A009E40  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37927,948,629 - 27,948,812UniSTSGRCh37
Build 36927,938,629 - 27,938,812RGDNCBI36
Celera927,876,722 - 27,876,905RGD
Cytogenetic Map9p21.2UniSTS
HuRef927,901,239 - 27,901,422UniSTS
GeneMap99-GB4 RH Map990.8UniSTS
NCBI RH Map9306.6UniSTS
D9S1736  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,143,565 - 28,143,732UniSTSGRCh37
Build 36928,133,565 - 28,133,732RGDNCBI36
Celera928,071,652 - 28,071,819RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,096,041 - 28,096,208UniSTS
Whitehead-YAC Contig Map9 UniSTS
RH98626  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,152,915 - 28,153,040UniSTSGRCh37
Build 36928,142,915 - 28,143,040RGDNCBI36
Celera928,081,002 - 28,081,127RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,105,390 - 28,105,515UniSTS
GeneMap99-GB4 RH Map990.61UniSTS
SHGC-77846  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,214,052 - 28,214,340UniSTSGRCh37
Build 36928,204,052 - 28,204,340RGDNCBI36
Celera928,144,545 - 28,144,833RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,166,499 - 28,166,787UniSTS
TNG Radiation Hybrid Map915190.0UniSTS
SHGC-78093  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,037,128 - 28,037,409UniSTSGRCh37
Build 36928,027,128 - 28,027,409RGDNCBI36
Celera927,965,225 - 27,965,506RGD
Cytogenetic Map9p21.2UniSTS
HuRef927,989,740 - 27,990,021UniSTS
SHGC-80671  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,367,189 - 28,367,512UniSTSGRCh37
Build 36928,357,189 - 28,357,512RGDNCBI36
Celera928,297,695 - 28,298,018RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,319,471 - 28,319,794UniSTS
TNG Radiation Hybrid Map915294.0UniSTS
RH120170  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,472,039 - 28,472,314UniSTSGRCh37
Build 36928,462,039 - 28,462,314RGDNCBI36
Celera928,402,563 - 28,402,838RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,424,390 - 28,424,665UniSTS
TNG Radiation Hybrid Map915376.0UniSTS
RH120719  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,332,499 - 28,332,690UniSTSGRCh37
Build 36928,322,499 - 28,322,690RGDNCBI36
Celera928,263,007 - 28,263,197RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,284,855 - 28,285,045UniSTS
TNG Radiation Hybrid Map915256.0UniSTS
RH119793  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,271,288 - 28,271,570UniSTSGRCh37
Build 36928,261,288 - 28,261,570RGDNCBI36
Celera928,201,793 - 28,202,075RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,223,729 - 28,224,011UniSTS
TNG Radiation Hybrid Map915219.0UniSTS
RH121299  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,056,834 - 28,057,168UniSTSGRCh37
Build 36928,046,834 - 28,047,168RGDNCBI36
Celera927,984,932 - 27,985,266RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,009,318 - 28,009,652UniSTS
D9S746  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,003,249 - 28,003,495UniSTSGRCh37
Build 36927,993,249 - 27,993,495RGDNCBI36
Celera927,931,340 - 27,931,586RGD
Cytogenetic Map9p21.2UniSTS
HuRef927,955,852 - 27,956,102UniSTS
D9S963  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,133,653 - 28,133,935UniSTSGRCh37
Build 36928,123,653 - 28,123,935RGDNCBI36
Celera928,061,740 - 28,062,022RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,086,129 - 28,086,411UniSTS
SHGC-106062  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,033,964 - 28,034,297UniSTSGRCh37
Build 36928,023,964 - 28,024,297RGDNCBI36
Celera927,962,059 - 27,962,392RGD
Cytogenetic Map9p21.2UniSTS
HuRef927,986,572 - 27,986,905UniSTS
SHGC-142482  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,300,082 - 28,300,355UniSTSGRCh37
Build 36928,290,082 - 28,290,355RGDNCBI36
Celera928,230,585 - 28,230,858RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,252,530 - 28,252,803UniSTS
TNG Radiation Hybrid Map915243.0UniSTS
SHGC-146914  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,360,269 - 28,360,591UniSTSGRCh37
Build 36928,350,269 - 28,350,591RGDNCBI36
Celera928,290,775 - 28,291,097RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,312,614 - 28,312,936UniSTS
SHGC-149139  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,360,557 - 28,360,863UniSTSGRCh37
Build 36928,350,557 - 28,350,863RGDNCBI36
Celera928,291,063 - 28,291,369RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,312,902 - 28,313,208UniSTS
TNG Radiation Hybrid Map915284.0UniSTS
SHGC-149594  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37927,997,840 - 27,998,127UniSTSGRCh37
Build 36927,987,840 - 27,988,127RGDNCBI36
Celera927,925,933 - 27,926,220RGD
Cytogenetic Map9p21.2UniSTS
HuRef927,950,448 - 27,950,735UniSTS
SHGC-152204  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,355,187 - 28,355,408UniSTSGRCh37
GRCh37928,355,187 - 28,355,386UniSTSGRCh37
GRCh37928,355,187 - 28,355,384UniSTSGRCh37
Build 36928,345,187 - 28,345,386RGDNCBI36
Celera928,285,692 - 28,285,913UniSTS
Celera928,285,692 - 28,285,889UniSTS
Celera928,285,692 - 28,285,891RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,307,532 - 28,307,749UniSTS
HuRef928,307,532 - 28,307,731UniSTS
TNG Radiation Hybrid Map1010576.0UniSTS
SHGC-155133  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,399,670 - 28,400,001UniSTSGRCh37
Build 36928,389,670 - 28,390,001RGDNCBI36
Celera928,330,181 - 28,330,512RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,351,983 - 28,352,314UniSTS
TNG Radiation Hybrid Map915341.0UniSTS
SHGC-155134  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,397,237 - 28,397,546UniSTSGRCh37
Build 36928,387,237 - 28,387,546RGDNCBI36
Celera928,327,748 - 28,328,057RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,349,544 - 28,349,855UniSTS
TNG Radiation Hybrid Map915341.0UniSTS
SHGC-83752  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,209,267 - 28,209,465UniSTSGRCh37
Build 36928,199,267 - 28,199,465RGDNCBI36
Celera928,139,760 - 28,139,958RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,161,715 - 28,161,913UniSTS
TNG Radiation Hybrid Map915187.0UniSTS
BB396479  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37927,948,131 - 27,948,267UniSTSGRCh37
Build 36927,938,131 - 27,938,267RGDNCBI36
Celera927,876,224 - 27,876,360RGD
HuRef927,900,741 - 27,900,877UniSTS
REN109927  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37790,706,468 - 90,706,702UniSTSGRCh37
GRCh37928,182,962 - 28,183,193UniSTSGRCh37
Build 36790,544,404 - 90,544,638RGDNCBI36
Celera785,411,242 - 85,411,476RGD
Celera928,111,074 - 28,111,305UniSTS
HuRef928,135,446 - 28,135,677UniSTS
HuRef785,314,524 - 85,314,758UniSTS
CRA_TCAGchr7v2790,036,931 - 90,037,165UniSTS
RH15970  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37927,948,644 - 27,948,772UniSTSGRCh37
Build 36927,938,644 - 27,938,772RGDNCBI36
Celera927,876,737 - 27,876,865RGD
Cytogenetic Map9p21.2UniSTS
HuRef927,901,254 - 27,901,382UniSTS
GeneMap99-GB4 RH Map992.86UniSTS
G15827  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,003,263 - 28,003,446UniSTSGRCh37
Build 36927,993,263 - 27,993,446RGDNCBI36
Celera927,931,354 - 27,931,537RGD
Cytogenetic Map9p21.2UniSTS
HuRef927,955,866 - 27,956,053UniSTS
D9S2025  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,708,675 - 28,708,875UniSTSGRCh37
Build 36928,698,675 - 28,698,875RGDNCBI36
Celera928,639,204 - 28,639,404RGD
Cytogenetic Map9p21.2UniSTS
HuRef928,661,640 - 28,661,852UniSTS
G32487  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37927,948,629 - 27,948,812UniSTSGRCh37
Celera927,876,722 - 27,876,905UniSTS
Cytogenetic Map9p21.2UniSTS
HuRef927,901,239 - 27,901,422UniSTS
GDB:315517  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37928,002,954 - 28,003,447UniSTSGRCh37
Celera927,931,045 - 27,931,538UniSTS
Cytogenetic Map9p21.2UniSTS
HuRef927,955,557 - 27,956,054UniSTS
D9S270  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9p21.2UniSTS
Marshfield Genetic Map951.21UniSTS
Genethon Genetic Map950.3UniSTS
deCODE Assembly Map952.79UniSTS
Whitehead-YAC Contig Map9 UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
921 2156 1784 998 4670 1392 1879 2 293 1125 200 2015 4175 4067 40 3609 695 1595 1425 102

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001258282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001354575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_152570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011517724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011517728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422814 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422817 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054362051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001746186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007080249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487942 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK056372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL158072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL162388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL353683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL353746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL354758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL360180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL445526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL450428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL451124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL592206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY358114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC137514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC144676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX538226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CS161398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA531255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DN991981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000308675   ⟹   ENSP00000310126
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,948,086 - 28,670,285 (-)Ensembl
Ensembl Acc Id: ENST00000379992   ⟹   ENSP00000369328
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,948,078 - 28,670,285 (-)Ensembl
Ensembl Acc Id: ENST00000493941
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl928,080,605 - 28,295,331 (-)Ensembl
Ensembl Acc Id: ENST00000613945   ⟹   ENSP00000479634
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,948,086 - 28,670,286 (-)Ensembl
Ensembl Acc Id: ENST00000698399   ⟹   ENSP00000513694
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,937,617 - 29,213,601 (-)Ensembl
Ensembl Acc Id: ENST00000698400   ⟹   ENSP00000513695
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,948,550 - 28,670,280 (-)Ensembl
Ensembl Acc Id: ENST00000698401   ⟹   ENSP00000513696
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,948,550 - 29,110,957 (-)Ensembl
Ensembl Acc Id: ENST00000698402   ⟹   ENSP00000513697
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,948,550 - 29,213,218 (-)Ensembl
Ensembl Acc Id: ENST00000698403   ⟹   ENSP00000513698
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,948,561 - 28,670,280 (-)Ensembl
Ensembl Acc Id: ENST00000698404   ⟹   ENSP00000513699
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,949,438 - 29,212,193 (-)Ensembl
Ensembl Acc Id: ENST00000698405
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl927,937,669 - 27,948,588 (-)Ensembl
RefSeq Acc Id: NM_001258282   ⟹   NP_001245211
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,213,601 (-)NCBI
GRCh37927,948,084 - 29,212,998 (-)NCBI
HuRef927,900,694 - 29,165,921 (-)NCBI
CHM1_1927,947,856 - 29,212,826 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354574   ⟹   NP_001341503
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,213,601 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001354575   ⟹   NP_001341504
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,212,299 (-)NCBI
Sequence:
RefSeq Acc Id: NM_152570   ⟹   NP_689783
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,719,305 (-)NCBI
GRCh37927,948,084 - 29,212,998 (-)NCBI
Build 36927,938,528 - 28,709,303 (-)NCBI Archive
Celera927,876,621 - 28,649,863 (-)RGD
HuRef927,900,694 - 29,165,921 (-)NCBI
CHM1_1927,947,856 - 28,719,096 (-)NCBI
T2T-CHM13v2.0927,948,210 - 28,732,530 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011517724   ⟹   XP_011516026
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,038,236 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011517728   ⟹   XP_011516030
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,038,236 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017014303   ⟹   XP_016869792
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,213,601 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017014304   ⟹   XP_016869793
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,038,236 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017014305   ⟹   XP_016869794
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,038,236 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017014306   ⟹   XP_016869795
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,016,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017014307   ⟹   XP_016869796
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 27,984,364 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047422810   ⟹   XP_047278766
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,213,601 (-)NCBI
RefSeq Acc Id: XM_047422811   ⟹   XP_047278767
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,212,299 (-)NCBI
RefSeq Acc Id: XM_047422812   ⟹   XP_047278768
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,213,601 (-)NCBI
RefSeq Acc Id: XM_047422813   ⟹   XP_047278769
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,212,299 (-)NCBI
RefSeq Acc Id: XM_047422814   ⟹   XP_047278770
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,213,601 (-)NCBI
RefSeq Acc Id: XM_047422815   ⟹   XP_047278771
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,212,299 (-)NCBI
RefSeq Acc Id: XM_047422816   ⟹   XP_047278772
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,931,814 (-)NCBI
RefSeq Acc Id: XM_047422817   ⟹   XP_047278773
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 28,688,535 (-)NCBI
RefSeq Acc Id: XM_047422818   ⟹   XP_047278774
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38927,937,617 - 29,212,299 (-)NCBI
RefSeq Acc Id: XM_054362030   ⟹   XP_054218005
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,231,559 (-)NCBI
RefSeq Acc Id: XM_054362031   ⟹   XP_054218006
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,225,998 (-)NCBI
RefSeq Acc Id: XM_054362032   ⟹   XP_054218007
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,231,559 (-)NCBI
RefSeq Acc Id: XM_054362033   ⟹   XP_054218008
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,231,559 (-)NCBI
RefSeq Acc Id: XM_054362034   ⟹   XP_054218009
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,225,968 (-)NCBI
RefSeq Acc Id: XM_054362035   ⟹   XP_054218010
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,225,901 (-)NCBI
RefSeq Acc Id: XM_054362036   ⟹   XP_054218011
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,231,559 (-)NCBI
RefSeq Acc Id: XM_054362037   ⟹   XP_054218012
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,231,559 (-)NCBI
RefSeq Acc Id: XM_054362038   ⟹   XP_054218013
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,988,000 (-)NCBI
RefSeq Acc Id: XM_054362039   ⟹   XP_054218014
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,225,998 (-)NCBI
RefSeq Acc Id: XM_054362040   ⟹   XP_054218015
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,231,559 (-)NCBI
RefSeq Acc Id: XM_054362041   ⟹   XP_054218016
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,945,052 (-)NCBI
RefSeq Acc Id: XM_054362042   ⟹   XP_054218017
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,988,000 (-)NCBI
RefSeq Acc Id: XM_054362043   ⟹   XP_054218018
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,701,760 (-)NCBI
RefSeq Acc Id: XM_054362044   ⟹   XP_054218019
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,988,000 (-)NCBI
RefSeq Acc Id: XM_054362045   ⟹   XP_054218020
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,226,005 (-)NCBI
RefSeq Acc Id: XM_054362046   ⟹   XP_054218021
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,049,016 (-)NCBI
RefSeq Acc Id: XM_054362047   ⟹   XP_054218022
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,049,016 (-)NCBI
RefSeq Acc Id: XM_054362048   ⟹   XP_054218023
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,027,272 (-)NCBI
RefSeq Acc Id: XM_054362049   ⟹   XP_054218024
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,049,016 (-)NCBI
RefSeq Acc Id: XM_054362050   ⟹   XP_054218025
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 28,049,016 (-)NCBI
RefSeq Acc Id: XM_054362051   ⟹   XP_054218026
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 27,994,966 (-)NCBI
RefSeq Acc Id: XR_007080249
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0928,923,933 - 29,231,596 (-)NCBI
RefSeq Acc Id: XR_008487942
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0927,951,196 - 29,231,559 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001245211 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341503 (Get FASTA)   NCBI Sequence Viewer  
  NP_001341504 (Get FASTA)   NCBI Sequence Viewer  
  NP_689783 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516026 (Get FASTA)   NCBI Sequence Viewer  
  XP_011516030 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869792 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869793 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869794 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869795 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869796 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278766 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278767 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278768 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278769 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278770 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278771 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278772 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278773 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278774 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218005 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218006 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218007 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218008 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218009 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218010 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218011 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218012 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218013 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218014 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218015 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218016 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218017 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218018 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218019 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218020 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218021 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218022 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218023 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218024 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218025 (Get FASTA)   NCBI Sequence Viewer  
  XP_054218026 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI37515 (Get FASTA)   NCBI Sequence Viewer  
  AAI44677 (Get FASTA)   NCBI Sequence Viewer  
  AAQ88481 (Get FASTA)   NCBI Sequence Viewer  
  BAB71167 (Get FASTA)   NCBI Sequence Viewer  
  BAD18799 (Get FASTA)   NCBI Sequence Viewer  
  BAF83661 (Get FASTA)   NCBI Sequence Viewer  
  CAJ30882 (Get FASTA)   NCBI Sequence Viewer  
  EAW58557 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000369328
  ENSP00000369328.1
  ENSP00000513694
  ENSP00000513694.1
  ENSP00000513695
  ENSP00000513695.1
  ENSP00000513696
  ENSP00000513696.1
  ENSP00000513697.1
  ENSP00000513698.1
GenBank Protein Q7L985 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_689783   ⟸   NM_152570
- Peptide Label: precursor
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001245211   ⟸   NM_001258282
- Peptide Label: precursor
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516026   ⟸   XM_011517724
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011516030   ⟸   XM_011517728
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016869792   ⟸   XM_017014303
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016869794   ⟸   XM_017014305
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016869793   ⟸   XM_017014304
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016869795   ⟸   XM_017014306
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_016869796   ⟸   XM_017014307
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001341503   ⟸   NM_001354574
- Peptide Label: precursor
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001341504   ⟸   NM_001354575
- Peptide Label: precursor
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSP00000310126   ⟸   ENST00000308675
Ensembl Acc Id: ENSP00000479634   ⟸   ENST00000613945
Ensembl Acc Id: ENSP00000369328   ⟸   ENST00000379992
RefSeq Acc Id: XP_047278770   ⟸   XM_047422814
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278766   ⟸   XM_047422810
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278768   ⟸   XM_047422812
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278774   ⟸   XM_047422818
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278771   ⟸   XM_047422815
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278767   ⟸   XM_047422811
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278769   ⟸   XM_047422813
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278772   ⟸   XM_047422816
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_047278773   ⟸   XM_047422817
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSP00000513699   ⟸   ENST00000698404
Ensembl Acc Id: ENSP00000513698   ⟸   ENST00000698403
Ensembl Acc Id: ENSP00000513694   ⟸   ENST00000698399
Ensembl Acc Id: ENSP00000513697   ⟸   ENST00000698402
Ensembl Acc Id: ENSP00000513695   ⟸   ENST00000698400
Ensembl Acc Id: ENSP00000513696   ⟸   ENST00000698401
RefSeq Acc Id: XP_054218011   ⟸   XM_054362036
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218005   ⟸   XM_054362030
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218012   ⟸   XM_054362037
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218007   ⟸   XM_054362032
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218015   ⟸   XM_054362040
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218008   ⟸   XM_054362033
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218020   ⟸   XM_054362045
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218006   ⟸   XM_054362031
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218014   ⟸   XM_054362039
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218009   ⟸   XM_054362034
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218010   ⟸   XM_054362035
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218013   ⟸   XM_054362038
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218017   ⟸   XM_054362042
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218019   ⟸   XM_054362044
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218016   ⟸   XM_054362041
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218018   ⟸   XM_054362043
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218025   ⟸   XM_054362050
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218024   ⟸   XM_054362049
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218022   ⟸   XM_054362047
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218021   ⟸   XM_054362046
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218023   ⟸   XM_054362048
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054218026   ⟸   XM_054362051
- Peptide Label: isoform X1
- UniProtKB: Q7L985 (UniProtKB/Swiss-Prot),   Q6ZMD0 (UniProtKB/Swiss-Prot),   B2RPM5 (UniProtKB/Swiss-Prot),   A8K4K7 (UniProtKB/Swiss-Prot),   B7ZMN0 (UniProtKB/TrEMBL)
Protein Domains
Ig-like   Ig-like C2-type   LRRCT   LRRNT

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7L985-F1-model_v2 AlphaFold Q7L985 1-606 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:21207 AgrOrtholog
COSMIC LINGO2 COSMIC
Ensembl Genes ENSG00000174482 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000379992 ENTREZGENE
  ENST00000379992.6 UniProtKB/Swiss-Prot
  ENST00000698399 ENTREZGENE
  ENST00000698399.1 UniProtKB/Swiss-Prot
  ENST00000698400 ENTREZGENE
  ENST00000698400.1 UniProtKB/Swiss-Prot
  ENST00000698401 ENTREZGENE
  ENST00000698401.1 UniProtKB/Swiss-Prot
  ENST00000698402.1 UniProtKB/Swiss-Prot
  ENST00000698403.1 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot
  3.80.10.10 UniProtKB/Swiss-Prot
GTEx ENSG00000174482 GTEx
HGNC ID HGNC:21207 ENTREZGENE
Human Proteome Map LINGO2 Human Proteome Map
InterPro Ig-like_dom UniProtKB/Swiss-Prot
  Ig-like_dom_sf UniProtKB/Swiss-Prot
  Ig-like_fold UniProtKB/Swiss-Prot
  Ig_I-set UniProtKB/Swiss-Prot
  Ig_sub UniProtKB/Swiss-Prot
  Ig_sub2 UniProtKB/Swiss-Prot
  Leu-rich_rpt UniProtKB/Swiss-Prot
  Leu-rich_rpt_typical-subtyp UniProtKB/Swiss-Prot
  LRR_dom_sf UniProtKB/Swiss-Prot
  LRR_TM_domain-containing UniProtKB/Swiss-Prot
  LRRNT UniProtKB/Swiss-Prot
KEGG Report hsa:158038 UniProtKB/Swiss-Prot
NCBI Gene LINGO2 ENTREZGENE
OMIM 609793 OMIM
PANTHER ANTIGEN BSP, PUTATIVE-RELATED UniProtKB/Swiss-Prot
  LEUCINE RICH REPEAT AND IG DOMAIN CONTAINING 2 UniProtKB/Swiss-Prot
Pfam I-set UniProtKB/Swiss-Prot
  LRR_1 UniProtKB/Swiss-Prot
  LRR_8 UniProtKB/Swiss-Prot
PharmGKB PA162394096 PharmGKB
PROSITE IG_LIKE UniProtKB/Swiss-Prot
  LRR UniProtKB/Swiss-Prot
SMART IGc2 UniProtKB/Swiss-Prot
  LRR_TYP UniProtKB/Swiss-Prot
  LRRNT UniProtKB/Swiss-Prot
  SM00409 UniProtKB/Swiss-Prot
Superfamily-SCOP L domain-like UniProtKB/Swiss-Prot
  SSF48726 UniProtKB/Swiss-Prot
UniProt A0A8V8TNG1_HUMAN UniProtKB/TrEMBL
  A8K4K7 ENTREZGENE
  B2RPM5 ENTREZGENE
  B7ZMN0 ENTREZGENE, UniProtKB/TrEMBL
  LIGO2_HUMAN UniProtKB/Swiss-Prot
  Q6ZMD0 ENTREZGENE
  Q7L985 ENTREZGENE
UniProt Secondary A8K4K7 UniProtKB/Swiss-Prot
  B2RPM5 UniProtKB/Swiss-Prot
  Q6ZMD0 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-03-23 LINGO2  leucine rich repeat and Ig domain containing 2  LOC124906826  uncharacterized LOC124906826  Data merged from RGD:151671252 737654 PROVISIONAL