PCDHGB7 (protocadherin gamma subfamily B, 7) - Rat Genome Database

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Gene: PCDHGB7 (protocadherin gamma subfamily B, 7) Homo sapiens
Analyze
Symbol: PCDHGB7
Name: protocadherin gamma subfamily B, 7
RGD ID: 1344386
HGNC Page HGNC:8714
Description: Predicted to enable calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to be located in plasma membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: cadherin ME6; ME6; PCDH-GAMMA-B7; protocadherin gamma-B7
RGD Orthologs
Mouse
Rat
Bonobo
Squirrel
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385141,417,677 - 141,512,975 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5141,417,645 - 141,512,975 (+)EnsemblGRCh38hg38GRCh38
GRCh375140,797,244 - 140,892,542 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,777,466 - 140,872,730 (+)NCBINCBI36Build 36hg18NCBI36
Build 345140,777,465 - 140,780,180NCBI
Celera5136,874,104 - 136,969,282 (+)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5135,942,410 - 136,037,388 (+)NCBIHuRef
CHM1_15140,230,477 - 140,325,825 (+)NCBICHM1_1
T2T-CHM13v2.05141,943,511 - 142,038,959 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9182820   PMID:10380929   PMID:10716726   PMID:10817752   PMID:10835267   PMID:11230163   PMID:12477932   PMID:15489334   PMID:21873635   PMID:29507755   PMID:33961781   PMID:34185407  


Genomics

Comparative Map Data
PCDHGB7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385141,417,677 - 141,512,975 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5141,417,645 - 141,512,975 (+)EnsemblGRCh38hg38GRCh38
GRCh375140,797,244 - 140,892,542 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365140,777,466 - 140,872,730 (+)NCBINCBI36Build 36hg18NCBI36
Build 345140,777,465 - 140,780,180NCBI
Celera5136,874,104 - 136,969,282 (+)NCBICelera
Cytogenetic Map5q31.3NCBI
HuRef5135,942,410 - 136,037,388 (+)NCBIHuRef
CHM1_15140,230,477 - 140,325,825 (+)NCBICHM1_1
T2T-CHM13v2.05141,943,511 - 142,038,959 (+)NCBIT2T-CHM13v2.0
Pcdhgb7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391837,884,672 - 37,974,923 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1837,884,653 - 37,974,926 (+)EnsemblGRCm39 Ensembl
GRCm381837,751,619 - 37,841,870 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1837,751,600 - 37,841,873 (+)EnsemblGRCm38mm10GRCm38
MGSCv371837,911,433 - 38,001,524 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361837,877,753 - 37,967,844 (+)NCBIMGSCv36mm8
Celera1839,085,707 - 39,185,349 (+)NCBICelera
Cytogenetic Map18B3NCBI
cM Map1819.62NCBI
Pcdhgb7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81829,830,362 - 29,919,098 (+)NCBIGRCr8
mRatBN7.21829,579,129 - 29,667,868 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1829,493,954 - 29,667,868 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1829,683,467 - 29,772,193 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01830,445,238 - 30,534,173 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01829,780,561 - 29,869,514 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01830,900,120 - 30,971,116 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1830,900,291 - 30,902,711 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01830,594,347 - 30,662,068 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41830,660,280 - 30,754,208 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1829,225,618 - 29,311,957 (+)NCBICelera
Cytogenetic Map18p11NCBI
LOC100983852
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24136,667,503 - 136,670,505 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15134,806,704 - 134,809,481 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05136,779,117 - 136,782,629 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15142,892,523 - 142,895,842 (+)NCBIpanpan1.1PanPan1.1panPan2
Pcdhgb7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213151,156,128 - 151,158,614 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493650412,730,101 - 12,732,587 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
Pcdhgb7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624774655,090 - 657,077 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PCDHGB7
199 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 5q23.3-33.2(chr5:130860928-155321811)x3 copy number gain See cases [RCV000051193] Chr5:130860928..155321811 [GRCh38]
Chr5:130196621..154701371 [GRCh37]
Chr5:130224520..154681564 [NCBI36]
Chr5:5q23.3-33.2
pathogenic
GRCh38/hg38 5q31.2-32(chr5:138871137-145812309)x1 copy number loss See cases [RCV000052142] Chr5:138871137..145812309 [GRCh38]
Chr5:138206826..145191872 [GRCh37]
Chr5:138234725..145172065 [NCBI36]
Chr5:5q31.2-32
pathogenic
GRCh38/hg38 5q21.3-33.2(chr5:106619588-156124387)x1 copy number loss See cases [RCV000053524] Chr5:106619588..156124387 [GRCh38]
Chr5:105955289..155551397 [GRCh37]
Chr5:105983188..155483975 [NCBI36]
Chr5:5q21.3-33.2
pathogenic
NM_003735.2(PCDHGA12):c.1619C>T (p.Pro540Leu) single nucleotide variant Malignant melanoma [RCV000061164] Chr5:141432378 [GRCh38]
Chr5:140811945 [GRCh37]
Chr5:140792129 [NCBI36]
Chr5:5q31.3
not provided
NM_032402.1(PCDHGC3):c.1630A>C (p.Thr544Pro) single nucleotide variant Malignant melanoma [RCV000061165] Chr5:141477746 [GRCh38]
Chr5:140857313 [GRCh37]
Chr5:140837497 [NCBI36]
Chr5:5q31.3
not provided
NM_018913.2(PCDHGA10):c.1863C>T (p.Phe621=) single nucleotide variant Malignant melanoma [RCV000066748] Chr5:141415038 [GRCh38]
Chr5:140794605 [GRCh37]
Chr5:140774789 [NCBI36]
Chr5:5q31.3
not provided
NM_018929.2(PCDHGC5):c.2080C>T (p.Leu694Phe) single nucleotide variant Malignant melanoma [RCV000066749] Chr5:141491320 [GRCh38]
Chr5:140870887 [GRCh37]
Chr5:140851071 [NCBI36]
Chr5:5q31.3
not provided
NM_018928.3(PCDHGC4):c.462G>A (p.Leu154=) single nucleotide variant not provided [RCV000122561] Chr5:141485635 [GRCh38]
Chr5:140865202 [GRCh37]
Chr5:5q31.3
uncertain significance
GRCh38/hg38 5q31.3(chr5:140963199-142322798)x1 copy number loss See cases [RCV000136949] Chr5:140963199..142322798 [GRCh38]
Chr5:140453735..141702363 [GRCh37]
Chr5:140322968..141682547 [NCBI36]
Chr5:5q31.3
uncertain significance
GRCh38/hg38 5q23.3-33.2(chr5:129847794-153353546)x3 copy number gain See cases [RCV000138808] Chr5:129847794..153353546 [GRCh38]
Chr5:129183487..152733106 [GRCh37]
Chr5:129211386..152713299 [NCBI36]
Chr5:5q23.3-33.2
pathogenic
GRCh38/hg38 5q31.3-32(chr5:141089988-149530678)x3 copy number gain See cases [RCV000139504] Chr5:141089988..149530678 [GRCh38]
Chr5:140469572..148910241 [GRCh37]
Chr5:140449756..148890434 [NCBI36]
Chr5:5q31.3-32
pathogenic
GRCh38/hg38 5q31.2-31.3(chr5:138942857-144605017)x3 copy number gain See cases [RCV000142806] Chr5:138942857..144605017 [GRCh38]
Chr5:138278546..143984580 [GRCh37]
Chr5:138306445..143964773 [NCBI36]
Chr5:5q31.2-31.3
uncertain significance
GRCh37/hg19 5q15-35.3(chr5:94844077-178830410)x3 copy number gain not provided [RCV000487658] Chr5:94844077..178830410 [GRCh37]
Chr5:5q15-35.3
likely benign
NM_003735.3(PCDHGA12):c.1448A>G (p.Glu483Gly) single nucleotide variant Inborn genetic diseases [RCV003268387] Chr5:141432207 [GRCh38]
Chr5:140811774 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1598A>G (p.Gln533Arg) single nucleotide variant Inborn genetic diseases [RCV003268656] Chr5:141419457 [GRCh38]
Chr5:140799024 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1436C>A (p.Pro479His) single nucleotide variant Inborn genetic diseases [RCV003267182] Chr5:141432195 [GRCh38]
Chr5:140811762 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2116G>A (p.Ala706Thr) single nucleotide variant Inborn genetic diseases [RCV003244116] Chr5:141419975 [GRCh38]
Chr5:140799542 [GRCh37]
Chr5:5q31.3
uncertain significance
NC_000005.9:g.(?_86400000)_(154000000_?)del deletion Familial adenomatous polyposis 1 [RCV002231249]|Hereditary cancer-predisposing syndrome [RCV000554476] Chr5:86400000..154000000 [GRCh37]
Chr5:5q14.3-33.2
pathogenic
GRCh37/hg19 5q23.3-33.3(chr5:130125085-157574910)x3 copy number gain See cases [RCV000449349] Chr5:130125085..157574910 [GRCh37]
Chr5:5q23.3-33.3
pathogenic
GRCh37/hg19 5q31.3(chr5:140800486-140807631)x3 copy number gain See cases [RCV000446668] Chr5:140800486..140807631 [GRCh37]
Chr5:5q31.3
uncertain significance
GRCh37/hg19 5q21.3-35.3(chr5:106716357-180687338)x3 copy number gain See cases [RCV000448245] Chr5:106716357..180687338 [GRCh37]
Chr5:5q21.3-35.3
pathogenic
GRCh37/hg19 5p15.1-q35.2(chr5:17628741-176575720)x1 copy number loss See cases [RCV000511978] Chr5:17628741..176575720 [GRCh37]
Chr5:5p15.1-q35.2
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789)x3 copy number gain See cases [RCV000512039] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:113577-180719789) copy number gain See cases [RCV000510723] Chr5:113577..180719789 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
NM_018929.3(PCDHGC5):c.1610G>A (p.Arg537Gln) single nucleotide variant Inborn genetic diseases [RCV003296480] Chr5:141490850 [GRCh38]
Chr5:140870417 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.27C>A (p.Asp9Glu) single nucleotide variant Inborn genetic diseases [RCV003273861] Chr5:141421254 [GRCh38]
Chr5:140800821 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.2041C>G (p.Pro681Ala) single nucleotide variant Inborn genetic diseases [RCV003276469] Chr5:141432800 [GRCh38]
Chr5:140812367 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.2236G>T (p.Ala746Ser) single nucleotide variant Inborn genetic diseases [RCV003259790] Chr5:141478352 [GRCh38]
Chr5:140857919 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1696C>T (p.Pro566Ser) single nucleotide variant Inborn genetic diseases [RCV003274734] Chr5:141422923 [GRCh38]
Chr5:140802490 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.191T>C (p.Leu64Pro) single nucleotide variant Inborn genetic diseases [RCV003242204] Chr5:141485364 [GRCh38]
Chr5:140864931 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.178A>T (p.Ser60Cys) single nucleotide variant Inborn genetic diseases [RCV003240393] Chr5:141476294 [GRCh38]
Chr5:140855861 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.955A>G (p.Ile319Val) single nucleotide variant Inborn genetic diseases [RCV003288149] Chr5:141418814 [GRCh38]
Chr5:140798381 [GRCh37]
Chr5:5q31.3
likely benign
NM_018927.4(PCDHGB7):c.1611G>C (p.Gln537His) single nucleotide variant Inborn genetic diseases [RCV003302411] Chr5:141419470 [GRCh38]
Chr5:140799037 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1627A>C (p.Ser543Arg) single nucleotide variant Inborn genetic diseases [RCV003302412] Chr5:141419486 [GRCh38]
Chr5:140799053 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.194T>C (p.Val65Ala) single nucleotide variant Inborn genetic diseases [RCV003287441] Chr5:141421421 [GRCh38]
Chr5:140800988 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1706G>A (p.Arg569Gln) single nucleotide variant Inborn genetic diseases [RCV003281239] Chr5:141486879 [GRCh38]
Chr5:140866446 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.412C>G (p.Leu138Val) single nucleotide variant Inborn genetic diseases [RCV003256689] Chr5:141485585 [GRCh38]
Chr5:140865152 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.655G>A (p.Asp219Asn) single nucleotide variant Inborn genetic diseases [RCV003277945] Chr5:141418514 [GRCh38]
Chr5:140798081 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.262G>A (p.Asp88Asn) single nucleotide variant Inborn genetic diseases [RCV003266765] Chr5:141418121 [GRCh38]
Chr5:140797688 [GRCh37]
Chr5:5q31.3
uncertain significance
GRCh37/hg19 5q31.3(chr5:140676272-140929172)x3 copy number gain See cases [RCV000512526] Chr5:140676272..140929172 [GRCh37]
Chr5:5q31.3
likely benign
GRCh37/hg19 5q31.2-31.3(chr5:139147238-141540491)x1 copy number loss not provided [RCV000682600] Chr5:139147238..141540491 [GRCh37]
Chr5:5q31.2-31.3
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:25328-180693344)x3 copy number gain not provided [RCV000744323] Chr5:25328..180693344 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
GRCh37/hg19 5p15.33-q35.3(chr5:13648-180905029)x3 copy number gain not provided [RCV000744317] Chr5:13648..180905029 [GRCh37]
Chr5:5p15.33-q35.3
pathogenic
NM_018928.3(PCDHGC4):c.1091A>C (p.Glu364Ala) single nucleotide variant Inborn genetic diseases [RCV003246193] Chr5:141486264 [GRCh38]
Chr5:140865831 [GRCh37]
Chr5:5q31.3
uncertain significance
Single allele deletion Neurodevelopmental disorder [RCV000787436] Chr5:14685137..149511942 [GRCh37]
Chr5:5p15.2-q32
uncertain significance
NM_018913.3(PCDHGA10):c.2673C>T (p.His891=) single nucleotide variant not provided [RCV000928114] Chr5:141511035 [GRCh38]
Chr5:140890602 [GRCh37]
Chr5:5q31.3
likely benign
NM_018929.3(PCDHGC5):c.2121C>A (p.Val707=) single nucleotide variant not provided [RCV000903600] Chr5:141491361 [GRCh38]
Chr5:140870928 [GRCh37]
Chr5:5q31.3
benign
NM_018913.3(PCDHGA10):c.2640C>T (p.Ser880=) single nucleotide variant not provided [RCV000914990] Chr5:141511002 [GRCh38]
Chr5:140890569 [GRCh37]
Chr5:5q31.3
likely benign
NM_002588.4(PCDHGC3):c.2178A>G (p.Leu726=) single nucleotide variant not provided [RCV000963442] Chr5:141478294 [GRCh38]
Chr5:140857861 [GRCh37]
Chr5:5q31.3
benign
NM_018927.4(PCDHGB7):c.1579A>G (p.Thr527Ala) single nucleotide variant Inborn genetic diseases [RCV003288837] Chr5:141419438 [GRCh38]
Chr5:140799005 [GRCh37]
Chr5:5q31.3
likely benign
NM_002588.4(PCDHGC3):c.2646A>G (p.Gly882=) single nucleotide variant not provided [RCV000897354] Chr5:141511014 [GRCh38]
Chr5:140890581 [GRCh37]
Chr5:5q31.3
benign
GRCh37/hg19 5q31.3-32(chr5:140424333-148985999)x3 copy number gain not provided [RCV000848228] Chr5:140424333..148985999 [GRCh37]
Chr5:5q31.3-32
uncertain significance
NM_018914.3(PCDHGA11):c.509G>A (p.Ser170Asn) single nucleotide variant Inborn genetic diseases [RCV003249258] Chr5:141421736 [GRCh38]
Chr5:140801303 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2131G>A (p.Val711Met) single nucleotide variant Inborn genetic diseases [RCV003239662] Chr5:141423358 [GRCh38]
Chr5:140802925 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1585C>G (p.Gln529Glu) single nucleotide variant Inborn genetic diseases [RCV003251459] Chr5:141432344 [GRCh38]
Chr5:140811911 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.970G>A (p.Ala324Thr) single nucleotide variant Inborn genetic diseases [RCV003291367] Chr5:141477086 [GRCh38]
Chr5:140856653 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.890C>T (p.Pro297Leu) single nucleotide variant Inborn genetic diseases [RCV003291368] Chr5:141486063 [GRCh38]
Chr5:140865630 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.714C>G (p.Asn238Lys) single nucleotide variant Inborn genetic diseases [RCV003276009] Chr5:141431473 [GRCh38]
Chr5:140811040 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1965A>G (p.Ser655=) single nucleotide variant not provided [RCV000975083] Chr5:141491205 [GRCh38]
Chr5:140870772 [GRCh37]
Chr5:5q31.3
benign
NM_018929.3(PCDHGC5):c.1173G>A (p.Pro391=) single nucleotide variant not provided [RCV000956314] Chr5:141490413 [GRCh38]
Chr5:140869980 [GRCh37]
Chr5:5q31.3
benign
NM_018929.3(PCDHGC5):c.1407G>A (p.Pro469=) single nucleotide variant not provided [RCV000956315] Chr5:141490647 [GRCh38]
Chr5:140870214 [GRCh37]
Chr5:5q31.3
benign
NM_018929.3(PCDHGC5):c.2013T>C (p.Pro671=) single nucleotide variant not provided [RCV000956316] Chr5:141491253 [GRCh38]
Chr5:140870820 [GRCh37]
Chr5:5q31.3
benign
NC_000005.9:g.(?_136633338)_(140998481_?)dup duplication PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome [RCV001339088] Chr5:136633338..140998481 [GRCh37]
Chr5:5q31.2-31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1243C>T (p.Arg415Ter) single nucleotide variant Neurodevelopmental disorder with poor growth and skeletal anomalies [RCV002248464] Chr5:141486416 [GRCh38]
Chr5:140865983 [GRCh37]
Chr5:5q31.3
pathogenic
GRCh37/hg19 5q23.3-33.3(chr5:130125085-157574910) copy number gain not specified [RCV002053526] Chr5:130125085..157574910 [GRCh37]
Chr5:5q23.3-33.3
pathogenic
NM_018928.3(PCDHGC4):c.1463C>T (p.Ala488Val) single nucleotide variant Neurodevelopmental disorder with poor growth and skeletal anomalies [RCV002248462] Chr5:141486636 [GRCh38]
Chr5:140866203 [GRCh37]
Chr5:5q31.3
pathogenic
NM_018928.3(PCDHGC4):c.324del (p.Phe108fs) deletion Neurodevelopmental disorder with poor growth and skeletal anomalies [RCV002248463] Chr5:141485495 [GRCh38]
Chr5:140865062 [GRCh37]
Chr5:5q31.3
pathogenic
NM_018928.3(PCDHGC4):c.118C>T (p.Gln40Ter) single nucleotide variant Neurodevelopmental disorder with poor growth and skeletal anomalies [RCV002248461] Chr5:141485291 [GRCh38]
Chr5:140864858 [GRCh37]
Chr5:5q31.3
pathogenic
NM_018914.3(PCDHGA11):c.1046C>A (p.Thr349Asn) single nucleotide variant Inborn genetic diseases [RCV003295056] Chr5:141422273 [GRCh38]
Chr5:140801840 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1449C>G (p.Asp483Glu) single nucleotide variant Neurodevelopmental disorder with poor growth and skeletal anomalies [RCV002248460] Chr5:141486622 [GRCh38]
Chr5:140866189 [GRCh37]
Chr5:5q31.3
pathogenic
NM_018928.3(PCDHGC4):c.2139dup (p.Lys714Ter) duplication Neurodevelopmental disorder with poor growth and skeletal anomalies [RCV002259562] Chr5:141487311..141487312 [GRCh38]
Chr5:140866878..140866879 [GRCh37]
Chr5:5q31.3
likely pathogenic
NM_018927.4(PCDHGB7):c.121C>A (p.Leu41Met) single nucleotide variant Inborn genetic diseases [RCV002771913] Chr5:141417980 [GRCh38]
Chr5:140797547 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.683_762del (p.Leu228fs) deletion Neurodevelopmental disorder with poor growth and skeletal anomalies [RCV002465045] Chr5:141485851..141485930 [GRCh38]
Chr5:140865418..140865497 [GRCh37]
Chr5:5q31.3
likely pathogenic
NM_002588.4(PCDHGC3):c.827A>G (p.Asn276Ser) single nucleotide variant Inborn genetic diseases [RCV002901821] Chr5:141476943 [GRCh38]
Chr5:140856510 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1781T>A (p.Val594Glu) single nucleotide variant Inborn genetic diseases [RCV002774150] Chr5:141432540 [GRCh38]
Chr5:140812107 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1901T>C (p.Val634Ala) single nucleotide variant Inborn genetic diseases [RCV002859975] Chr5:141478017 [GRCh38]
Chr5:140857584 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.557C>G (p.Pro186Arg) single nucleotide variant Inborn genetic diseases [RCV002816968] Chr5:141418416 [GRCh38]
Chr5:140797983 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.2266T>A (p.Ser756Thr) single nucleotide variant Inborn genetic diseases [RCV002729753] Chr5:141487439 [GRCh38]
Chr5:140867006 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.778G>A (p.Gly260Ser) single nucleotide variant Inborn genetic diseases [RCV002685215] Chr5:141476894 [GRCh38]
Chr5:140856461 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1775G>T (p.Arg592Leu) single nucleotide variant Inborn genetic diseases [RCV002682879] Chr5:141477891 [GRCh38]
Chr5:140857458 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1903G>T (p.Asp635Tyr) single nucleotide variant Inborn genetic diseases [RCV002901981] Chr5:141423130 [GRCh38]
Chr5:140802697 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2110A>G (p.Ile704Val) single nucleotide variant Inborn genetic diseases [RCV002969637] Chr5:141423337 [GRCh38]
Chr5:140802904 [GRCh37]
Chr5:5q31.3
likely benign
NM_018929.3(PCDHGC5):c.1531C>T (p.Pro511Ser) single nucleotide variant Inborn genetic diseases [RCV002841183] Chr5:141490771 [GRCh38]
Chr5:140870338 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.95G>A (p.Arg32His) single nucleotide variant Inborn genetic diseases [RCV002754361] Chr5:141489335 [GRCh38]
Chr5:140868902 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2353A>C (p.Ser785Arg) single nucleotide variant Inborn genetic diseases [RCV002969884] Chr5:141423580 [GRCh38]
Chr5:140803147 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.494G>A (p.Gly165Glu) single nucleotide variant Inborn genetic diseases [RCV002753651] Chr5:141476610 [GRCh38]
Chr5:140856177 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018917.4(PCDHGA4):c.2765G>A (p.Arg922His) single nucleotide variant Inborn genetic diseases [RCV002973702] Chr5:141511049 [GRCh38]
Chr5:140890616 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.989G>A (p.Arg330Gln) single nucleotide variant Inborn genetic diseases [RCV002778929] Chr5:141418848 [GRCh38]
Chr5:140798415 [GRCh37]
Chr5:5q31.3
likely benign
NM_018928.3(PCDHGC4):c.1405C>T (p.Arg469Cys) single nucleotide variant Inborn genetic diseases [RCV003012605] Chr5:141486578 [GRCh38]
Chr5:140866145 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.2375G>T (p.Ser792Ile) single nucleotide variant Inborn genetic diseases [RCV002907058] Chr5:141487548 [GRCh38]
Chr5:140867115 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.74G>C (p.Gly25Ala) single nucleotide variant Inborn genetic diseases [RCV002688535] Chr5:141485247 [GRCh38]
Chr5:140864814 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.74G>T (p.Arg25Leu) single nucleotide variant Inborn genetic diseases [RCV002778656] Chr5:141421301 [GRCh38]
Chr5:140800868 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.458G>A (p.Arg153His) single nucleotide variant Inborn genetic diseases [RCV002749439] Chr5:141476574 [GRCh38]
Chr5:140856141 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1289C>T (p.Ala430Val) single nucleotide variant Inborn genetic diseases [RCV002772906] Chr5:141486462 [GRCh38]
Chr5:140866029 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1883C>T (p.Thr628Met) single nucleotide variant Inborn genetic diseases [RCV002688016] Chr5:141432642 [GRCh38]
Chr5:140812209 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.391C>T (p.Pro131Ser) single nucleotide variant Inborn genetic diseases [RCV002880018] Chr5:141418250 [GRCh38]
Chr5:140797817 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.967C>T (p.Arg323Cys) single nucleotide variant Inborn genetic diseases [RCV002902754] Chr5:141490207 [GRCh38]
Chr5:140869774 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2336C>T (p.Thr779Met) single nucleotide variant Inborn genetic diseases [RCV002753867] Chr5:141423563 [GRCh38]
Chr5:140803130 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.832G>C (p.Val278Leu) single nucleotide variant Inborn genetic diseases [RCV002751836] Chr5:141422059 [GRCh38]
Chr5:140801626 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.376A>G (p.Ile126Val) single nucleotide variant Inborn genetic diseases [RCV002840789] Chr5:141431135 [GRCh38]
Chr5:140810702 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.2293A>C (p.Lys765Gln) single nucleotide variant Inborn genetic diseases [RCV002794110] Chr5:141433052 [GRCh38]
Chr5:140812619 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.118C>A (p.Gln40Lys) single nucleotide variant Inborn genetic diseases [RCV002753807] Chr5:141485291 [GRCh38]
Chr5:140864858 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.2092G>A (p.Val698Met) single nucleotide variant Inborn genetic diseases [RCV002859331] Chr5:141487265 [GRCh38]
Chr5:140866832 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1341C>G (p.Asn447Lys) single nucleotide variant Inborn genetic diseases [RCV002729146] Chr5:141422568 [GRCh38]
Chr5:140802135 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.967C>G (p.Arg323Gly) single nucleotide variant Inborn genetic diseases [RCV003013072] Chr5:141490207 [GRCh38]
Chr5:140869774 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.684C>G (p.Ile228Met) single nucleotide variant Inborn genetic diseases [RCV002901752] Chr5:141489924 [GRCh38]
Chr5:140869491 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.389C>T (p.Ala130Val) single nucleotide variant Inborn genetic diseases [RCV002778258] Chr5:141485562 [GRCh38]
Chr5:140865129 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.56T>A (p.Phe19Tyr) single nucleotide variant Inborn genetic diseases [RCV002865473] Chr5:141485229 [GRCh38]
Chr5:140864796 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1436C>T (p.Pro479Leu) single nucleotide variant Inborn genetic diseases [RCV002762265] Chr5:141432195 [GRCh38]
Chr5:140811762 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1254A>T (p.Lys418Asn) single nucleotide variant Inborn genetic diseases [RCV002760039] Chr5:141486427 [GRCh38]
Chr5:140865994 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.947C>T (p.Thr316Met) single nucleotide variant Inborn genetic diseases [RCV002884930] Chr5:141418806 [GRCh38]
Chr5:140798373 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1679G>A (p.Arg560His) single nucleotide variant Inborn genetic diseases [RCV002758563] Chr5:141477795 [GRCh38]
Chr5:140857362 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1012C>G (p.Leu338Val) single nucleotide variant Inborn genetic diseases [RCV002848553] Chr5:141431771 [GRCh38]
Chr5:140811338 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.710A>G (p.Asn237Ser) single nucleotide variant Inborn genetic diseases [RCV002981460] Chr5:141421937 [GRCh38]
Chr5:140801504 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2351G>A (p.Gly784Asp) single nucleotide variant Inborn genetic diseases [RCV002868150] Chr5:141491591 [GRCh38]
Chr5:140871158 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2173G>A (p.Asp725Asn) single nucleotide variant Inborn genetic diseases [RCV002911095] Chr5:141420032 [GRCh38]
Chr5:140799599 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1607A>T (p.Asp536Val) single nucleotide variant Inborn genetic diseases [RCV002845512] Chr5:141432366 [GRCh38]
Chr5:140811933 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.296G>T (p.Gly99Val) single nucleotide variant Inborn genetic diseases [RCV002910445] Chr5:141476412 [GRCh38]
Chr5:140855979 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.435C>G (p.Ser145Arg) single nucleotide variant Inborn genetic diseases [RCV002977040] Chr5:141476551 [GRCh38]
Chr5:140856118 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1547A>G (p.Tyr516Cys) single nucleotide variant Inborn genetic diseases [RCV002692980] Chr5:141422774 [GRCh38]
Chr5:140802341 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1132G>A (p.Glu378Lys) single nucleotide variant Inborn genetic diseases [RCV002951942] Chr5:141431891 [GRCh38]
Chr5:140811458 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.353G>A (p.Arg118His) single nucleotide variant Inborn genetic diseases [RCV002659935] Chr5:141489593 [GRCh38]
Chr5:140869160 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2392C>A (p.Pro798Thr) single nucleotide variant Inborn genetic diseases [RCV002797409] Chr5:141491632 [GRCh38]
Chr5:140871199 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2288C>T (p.Pro763Leu) single nucleotide variant Inborn genetic diseases [RCV002737635] Chr5:141420147 [GRCh38]
Chr5:140799714 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.28C>T (p.Arg10Cys) single nucleotide variant Inborn genetic diseases [RCV002758796] Chr5:141421255 [GRCh38]
Chr5:140800822 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.218G>A (p.Arg73His) single nucleotide variant Inborn genetic diseases [RCV002693330] Chr5:141489458 [GRCh38]
Chr5:140869025 [GRCh37]
Chr5:5q31.3
likely benign
NM_018927.4(PCDHGB7):c.1668C>G (p.Asn556Lys) single nucleotide variant Inborn genetic diseases [RCV002707392] Chr5:141419527 [GRCh38]
Chr5:140799094 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1205A>G (p.Tyr402Cys) single nucleotide variant Inborn genetic diseases [RCV002951415] Chr5:141419064 [GRCh38]
Chr5:140798631 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1732G>A (p.Val578Met) single nucleotide variant Inborn genetic diseases [RCV002977519] Chr5:141419591 [GRCh38]
Chr5:140799158 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.664C>A (p.Arg222Ser) single nucleotide variant Inborn genetic diseases [RCV002952271] Chr5:141431423 [GRCh38]
Chr5:140810990 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1922G>A (p.Ser641Asn) single nucleotide variant Inborn genetic diseases [RCV002660507] Chr5:141432681 [GRCh38]
Chr5:140812248 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.421C>T (p.Arg141Cys) single nucleotide variant Inborn genetic diseases [RCV002739398] Chr5:141489661 [GRCh38]
Chr5:140869228 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1894C>T (p.Arg632Cys) single nucleotide variant Inborn genetic diseases [RCV002661377] Chr5:141478010 [GRCh38]
Chr5:140857577 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2242T>A (p.Leu748Met) single nucleotide variant Inborn genetic diseases [RCV002924048] Chr5:141420101 [GRCh38]
Chr5:140799668 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1843G>A (p.Ala615Thr) single nucleotide variant Inborn genetic diseases [RCV002844427] Chr5:141491083 [GRCh38]
Chr5:140870650 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.941G>A (p.Arg314His) single nucleotide variant Inborn genetic diseases [RCV002978781] Chr5:141490181 [GRCh38]
Chr5:140869748 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2281A>T (p.Ile761Phe) single nucleotide variant Inborn genetic diseases [RCV002661994] Chr5:141423508 [GRCh38]
Chr5:140803075 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1477G>A (p.Ala493Thr) single nucleotide variant Inborn genetic diseases [RCV002739921] Chr5:141419336 [GRCh38]
Chr5:140798903 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2231G>A (p.Ser744Asn) single nucleotide variant Inborn genetic diseases [RCV002744264] Chr5:141420090 [GRCh38]
Chr5:140799657 [GRCh37]
Chr5:5q31.3
likely benign
NM_018914.3(PCDHGA11):c.277C>T (p.Arg93Trp) single nucleotide variant Inborn genetic diseases [RCV002830714] Chr5:141421504 [GRCh38]
Chr5:140801071 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.598C>G (p.Arg200Gly) single nucleotide variant Inborn genetic diseases [RCV002767610] Chr5:141476714 [GRCh38]
Chr5:140856281 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2304C>G (p.Asp768Glu) single nucleotide variant Inborn genetic diseases [RCV002668145] Chr5:141491544 [GRCh38]
Chr5:140871111 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1129C>T (p.Arg377Trp) single nucleotide variant Inborn genetic diseases [RCV002743829] Chr5:141490369 [GRCh38]
Chr5:140869936 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1802A>C (p.Asn601Thr) single nucleotide variant Inborn genetic diseases [RCV002768560] Chr5:141432561 [GRCh38]
Chr5:140812128 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1714G>A (p.Glu572Lys) single nucleotide variant Inborn genetic diseases [RCV002742108] Chr5:141490954 [GRCh38]
Chr5:140870521 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.619G>T (p.Asp207Tyr) single nucleotide variant Inborn genetic diseases [RCV002854115] Chr5:141485792 [GRCh38]
Chr5:140865359 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.649G>A (p.Gly217Arg) single nucleotide variant Inborn genetic diseases [RCV002787534] Chr5:141485822 [GRCh38]
Chr5:140865389 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1129C>T (p.Pro377Ser) single nucleotide variant Inborn genetic diseases [RCV002875241] Chr5:141486302 [GRCh38]
Chr5:140865869 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.2057C>A (p.Thr686Asn) single nucleotide variant Inborn genetic diseases [RCV002666229] Chr5:141432816 [GRCh38]
Chr5:140812383 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1130G>A (p.Arg377Gln) single nucleotide variant Inborn genetic diseases [RCV002698663] Chr5:141490370 [GRCh38]
Chr5:140869937 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.605G>T (p.Arg202Leu) single nucleotide variant Inborn genetic diseases [RCV002789895] Chr5:141431364 [GRCh38]
Chr5:140810931 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.2367G>T (p.Lys789Asn) single nucleotide variant Inborn genetic diseases [RCV002764626] Chr5:141487540 [GRCh38]
Chr5:140867107 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1482C>G (p.Phe494Leu) single nucleotide variant Inborn genetic diseases [RCV002915644] Chr5:141477598 [GRCh38]
Chr5:140857165 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1036C>T (p.Pro346Ser) single nucleotide variant Inborn genetic diseases [RCV002787729] Chr5:141422263 [GRCh38]
Chr5:140801830 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.988A>G (p.Asn330Asp) single nucleotide variant Inborn genetic diseases [RCV002713285] Chr5:141477104 [GRCh38]
Chr5:140856671 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1616C>T (p.Ser539Leu) single nucleotide variant Inborn genetic diseases [RCV003004655] Chr5:141419475 [GRCh38]
Chr5:140799042 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.152A>C (p.Asp51Ala) single nucleotide variant Inborn genetic diseases [RCV003006720] Chr5:141430911 [GRCh38]
Chr5:140810478 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1733T>G (p.Leu578Arg) single nucleotide variant Inborn genetic diseases [RCV002764476] Chr5:141422960 [GRCh38]
Chr5:140802527 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.661C>A (p.Pro221Thr) single nucleotide variant Inborn genetic diseases [RCV002916781] Chr5:141418520 [GRCh38]
Chr5:140798087 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.2389G>A (p.Gly797Arg) single nucleotide variant Inborn genetic diseases [RCV002699836] Chr5:141487562 [GRCh38]
Chr5:140867129 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2084T>C (p.Ile695Thr) single nucleotide variant Inborn genetic diseases [RCV003006603] Chr5:141491324 [GRCh38]
Chr5:140870891 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1046C>A (p.Ala349Asp) single nucleotide variant Inborn genetic diseases [RCV002640789] Chr5:141477162 [GRCh38]
Chr5:140856729 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1450C>T (p.Pro484Ser) single nucleotide variant Inborn genetic diseases [RCV002955393] Chr5:141477566 [GRCh38]
Chr5:140857133 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1534G>C (p.Gly512Arg) single nucleotide variant Inborn genetic diseases [RCV002941437] Chr5:141419393 [GRCh38]
Chr5:140798960 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.268A>C (p.Ile90Leu) single nucleotide variant Inborn genetic diseases [RCV002896933] Chr5:141485441 [GRCh38]
Chr5:140865008 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1585A>T (p.Met529Leu) single nucleotide variant Inborn genetic diseases [RCV002836093] Chr5:141490825 [GRCh38]
Chr5:140870392 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1703G>A (p.Gly568Asp) single nucleotide variant Inborn genetic diseases [RCV002940110] Chr5:141419562 [GRCh38]
Chr5:140799129 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1204T>A (p.Tyr402Asn) single nucleotide variant Inborn genetic diseases [RCV002813367] Chr5:141419063 [GRCh38]
Chr5:140798630 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1261C>T (p.Pro421Ser) single nucleotide variant Inborn genetic diseases [RCV002896889] Chr5:141477377 [GRCh38]
Chr5:140856944 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1153G>A (p.Val385Met) single nucleotide variant Inborn genetic diseases [RCV002920461] Chr5:141490393 [GRCh38]
Chr5:140869960 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.890C>A (p.Pro297His) single nucleotide variant Inborn genetic diseases [RCV002769865] Chr5:141490130 [GRCh38]
Chr5:140869697 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.968G>A (p.Arg323His) single nucleotide variant Inborn genetic diseases [RCV003008772] Chr5:141490208 [GRCh38]
Chr5:140869775 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2213C>T (p.Thr738Met) single nucleotide variant Inborn genetic diseases [RCV002936076] Chr5:141423440 [GRCh38]
Chr5:140803007 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.707A>G (p.Asn236Ser) single nucleotide variant Inborn genetic diseases [RCV002673562] Chr5:141489947 [GRCh38]
Chr5:140869514 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.445C>T (p.Pro149Ser) single nucleotide variant Inborn genetic diseases [RCV002935684] Chr5:141421672 [GRCh38]
Chr5:140801239 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1661A>G (p.Asn554Ser) single nucleotide variant Inborn genetic diseases [RCV002831843] Chr5:141477777 [GRCh38]
Chr5:140857344 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1606A>G (p.Thr536Ala) single nucleotide variant Inborn genetic diseases [RCV002964042] Chr5:141477722 [GRCh38]
Chr5:140857289 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1942G>A (p.Asp648Asn) single nucleotide variant Inborn genetic diseases [RCV002648768] Chr5:141432701 [GRCh38]
Chr5:140812268 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2191G>T (p.Gly731Cys) single nucleotide variant Inborn genetic diseases [RCV002940784] Chr5:141423418 [GRCh38]
Chr5:140802985 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1888C>G (p.Arg630Gly) single nucleotide variant Inborn genetic diseases [RCV002855312] Chr5:141432647 [GRCh38]
Chr5:140812214 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.427G>A (p.Val143Ile) single nucleotide variant Inborn genetic diseases [RCV003010866] Chr5:141421654 [GRCh38]
Chr5:140801221 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.356T>C (p.Val119Ala) single nucleotide variant Inborn genetic diseases [RCV002680402] Chr5:141431115 [GRCh38]
Chr5:140810682 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.32G>C (p.Ser11Thr) single nucleotide variant Inborn genetic diseases [RCV002944392] Chr5:141421259 [GRCh38]
Chr5:140800826 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.366G>C (p.Glu122Asp) single nucleotide variant Inborn genetic diseases [RCV002944525] Chr5:141485539 [GRCh38]
Chr5:140865106 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1510G>A (p.Gly504Arg) single nucleotide variant Inborn genetic diseases [RCV002678665] Chr5:141477626 [GRCh38]
Chr5:140857193 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.761A>T (p.Asp254Val) single nucleotide variant Inborn genetic diseases [RCV002652451] Chr5:141418620 [GRCh38]
Chr5:140798187 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2051C>T (p.Ser684Phe) single nucleotide variant Inborn genetic diseases [RCV002680184] Chr5:141419910 [GRCh38]
Chr5:140799477 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1657G>C (p.Val553Leu) single nucleotide variant Inborn genetic diseases [RCV002656012] Chr5:141422884 [GRCh38]
Chr5:140802451 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1189C>A (p.Leu397Ile) single nucleotide variant Inborn genetic diseases [RCV002678388] Chr5:141486362 [GRCh38]
Chr5:140865929 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.286C>G (p.Leu96Val) single nucleotide variant Inborn genetic diseases [RCV003279262] Chr5:141421513 [GRCh38]
Chr5:140801080 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2045T>C (p.Leu682Pro) single nucleotide variant Inborn genetic diseases [RCV003257183] Chr5:141423272 [GRCh38]
Chr5:140802839 [GRCh37]
Chr5:5q31.3
likely benign
NM_018929.3(PCDHGC5):c.31G>A (p.Gly11Arg) single nucleotide variant Inborn genetic diseases [RCV003219910] Chr5:141489271 [GRCh38]
Chr5:140868838 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2297A>T (p.Asn766Ile) single nucleotide variant Inborn genetic diseases [RCV003209835] Chr5:141420156 [GRCh38]
Chr5:140799723 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2443C>G (p.Leu815Val) single nucleotide variant Inborn genetic diseases [RCV003220538] Chr5:141491683 [GRCh38]
Chr5:140871250 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.69C>A (p.His23Gln) single nucleotide variant Inborn genetic diseases [RCV003189227] Chr5:141485242 [GRCh38]
Chr5:140864809 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1062C>G (p.Ser354Arg) single nucleotide variant Inborn genetic diseases [RCV003205045] Chr5:141431821 [GRCh38]
Chr5:140811388 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1552A>G (p.Ile518Val) single nucleotide variant Inborn genetic diseases [RCV003201369] Chr5:141477668 [GRCh38]
Chr5:140857235 [GRCh37]
Chr5:5q31.3
likely benign
NM_003735.3(PCDHGA12):c.698T>C (p.Leu233Pro) single nucleotide variant Inborn genetic diseases [RCV003200279] Chr5:141431457 [GRCh38]
Chr5:140811024 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1036G>A (p.Glu346Lys) single nucleotide variant Inborn genetic diseases [RCV003203956] Chr5:141431795 [GRCh38]
Chr5:140811362 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.682C>T (p.Leu228Phe) single nucleotide variant Inborn genetic diseases [RCV003212821] Chr5:141485855 [GRCh38]
Chr5:140865422 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.460G>C (p.Ala154Pro) single nucleotide variant Inborn genetic diseases [RCV003191248] Chr5:141421687 [GRCh38]
Chr5:140801254 [GRCh37]
Chr5:5q31.3
likely benign
NM_018914.3(PCDHGA11):c.1267T>G (p.Leu423Val) single nucleotide variant Inborn genetic diseases [RCV003179728] Chr5:141422494 [GRCh38]
Chr5:140802061 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.499T>G (p.Ser167Ala) single nucleotide variant Inborn genetic diseases [RCV003212994] Chr5:141421726 [GRCh38]
Chr5:140801293 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.2311G>A (p.Val771Ile) single nucleotide variant Inborn genetic diseases [RCV003173298] Chr5:141420170 [GRCh38]
Chr5:140799737 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1939G>A (p.Val647Ile) single nucleotide variant Inborn genetic diseases [RCV003197142] Chr5:141423166 [GRCh38]
Chr5:140802733 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.182T>G (p.Val61Gly) single nucleotide variant Inborn genetic diseases [RCV003173761] Chr5:141418041 [GRCh38]
Chr5:140797608 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1523A>C (p.Asn508Thr) single nucleotide variant Inborn genetic diseases [RCV003175322] Chr5:141432282 [GRCh38]
Chr5:140811849 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2030C>G (p.Ser677Cys) single nucleotide variant Inborn genetic diseases [RCV003212739] Chr5:141491270 [GRCh38]
Chr5:140870837 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.100C>T (p.Arg34Cys) single nucleotide variant Inborn genetic diseases [RCV003190958] Chr5:141417959 [GRCh38]
Chr5:140797526 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2170G>T (p.Asp724Tyr) single nucleotide variant Inborn genetic diseases [RCV003201204] Chr5:141491410 [GRCh38]
Chr5:140870977 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.334G>A (p.Gly112Ser) single nucleotide variant Inborn genetic diseases [RCV003199316] Chr5:141485507 [GRCh38]
Chr5:140865074 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.163G>A (p.Asp55Asn) single nucleotide variant Inborn genetic diseases [RCV003212014] Chr5:141485336 [GRCh38]
Chr5:140864903 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1584C>G (p.Phe528Leu) single nucleotide variant Inborn genetic diseases [RCV003302410] Chr5:141419443 [GRCh38]
Chr5:140799010 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1924C>T (p.Leu642Phe) single nucleotide variant Inborn genetic diseases [RCV003208118] Chr5:141432683 [GRCh38]
Chr5:140812250 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1634A>G (p.His545Arg) single nucleotide variant Inborn genetic diseases [RCV003197636] Chr5:141490874 [GRCh38]
Chr5:140870441 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.28C>G (p.Arg10Gly) single nucleotide variant Inborn genetic diseases [RCV003185687] Chr5:141421255 [GRCh38]
Chr5:140800822 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.2125G>A (p.Val709Met) single nucleotide variant Inborn genetic diseases [RCV003195812] Chr5:141487298 [GRCh38]
Chr5:140866865 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.664C>T (p.Pro222Ser) single nucleotide variant Inborn genetic diseases [RCV003179987] Chr5:141476780 [GRCh38]
Chr5:140856347 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.736G>A (p.Val246Met) single nucleotide variant Inborn genetic diseases [RCV003215238] Chr5:141418595 [GRCh38]
Chr5:140798162 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1406C>G (p.Pro469Arg) single nucleotide variant Inborn genetic diseases [RCV003204042] Chr5:141490646 [GRCh38]
Chr5:140870213 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2378T>G (p.Leu793Trp) single nucleotide variant Inborn genetic diseases [RCV003186280] Chr5:141423605 [GRCh38]
Chr5:140803172 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2078A>G (p.Tyr693Cys) single nucleotide variant Inborn genetic diseases [RCV003180985] Chr5:141423305 [GRCh38]
Chr5:140802872 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2300C>A (p.Thr767Lys) single nucleotide variant Inborn genetic diseases [RCV003193587] Chr5:141491540 [GRCh38]
Chr5:140871107 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1886G>A (p.Arg629His) single nucleotide variant Inborn genetic diseases [RCV003264729] Chr5:141491126 [GRCh38]
Chr5:140870693 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.989A>G (p.Asn330Ser) single nucleotide variant Inborn genetic diseases [RCV003309124] Chr5:141477105 [GRCh38]
Chr5:140856672 [GRCh37]
Chr5:5q31.3
likely benign
NM_018914.3(PCDHGA11):c.1018G>C (p.Asp340His) single nucleotide variant Inborn genetic diseases [RCV003339357] Chr5:141422245 [GRCh38]
Chr5:140801812 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2426G>A (p.Arg809Gln) single nucleotide variant Inborn genetic diseases [RCV003356760] Chr5:141491666 [GRCh38]
Chr5:140871233 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.1571C>A (p.Pro524His) single nucleotide variant Inborn genetic diseases [RCV003359110] Chr5:141477687 [GRCh38]
Chr5:140857254 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.503A>G (p.Gln168Arg) single nucleotide variant Inborn genetic diseases [RCV003358803] Chr5:141431262 [GRCh38]
Chr5:140810829 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.729A>T (p.Gln243His) single nucleotide variant Inborn genetic diseases [RCV003379302] Chr5:141489969 [GRCh38]
Chr5:140869536 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_002588.4(PCDHGC3):c.2431C>A (p.Gln811Lys) single nucleotide variant Inborn genetic diseases [RCV003359175] Chr5:141494807 [GRCh38]
Chr5:140874374 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.408T>G (p.Ser136Arg) single nucleotide variant Inborn genetic diseases [RCV003378740] Chr5:141431167 [GRCh38]
Chr5:140810734 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1310C>T (p.Thr437Ile) single nucleotide variant Inborn genetic diseases [RCV003345650] Chr5:141419169 [GRCh38]
Chr5:140798736 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.1085C>T (p.Pro362Leu) single nucleotide variant Inborn genetic diseases [RCV003359748] Chr5:141422312 [GRCh38]
Chr5:140801879 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1825C>T (p.Leu609Phe) single nucleotide variant Inborn genetic diseases [RCV003376390] Chr5:141432584 [GRCh38]
Chr5:140812151 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.1202A>T (p.Glu401Val) single nucleotide variant Inborn genetic diseases [RCV003383423] Chr5:141490442 [GRCh38]
Chr5:140870009 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018929.3(PCDHGC5):c.2014G>A (p.Glu672Lys) single nucleotide variant Inborn genetic diseases [RCV003367097] Chr5:141491254 [GRCh38]
Chr5:140870821 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018927.4(PCDHGB7):c.1091T>A (p.Val364Glu) single nucleotide variant Inborn genetic diseases [RCV003361990] Chr5:141418950 [GRCh38]
Chr5:140798517 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.592G>C (p.Glu198Gln) single nucleotide variant Inborn genetic diseases [RCV003349531] Chr5:141421819 [GRCh38]
Chr5:140801386 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.191T>G (p.Val64Gly) single nucleotide variant Inborn genetic diseases [RCV003350326] Chr5:141430950 [GRCh38]
Chr5:140810517 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_003735.3(PCDHGA12):c.1869G>A (p.Thr623=) single nucleotide variant Inborn genetic diseases [RCV003386192] Chr5:141432628 [GRCh38]
Chr5:140812195 [GRCh37]
Chr5:5q31.3
likely benign
NM_002588.4(PCDHGC3):c.921G>T (p.Lys307Asn) single nucleotide variant Inborn genetic diseases [RCV003354374] Chr5:141477037 [GRCh38]
Chr5:140856604 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018914.3(PCDHGA11):c.2374C>T (p.Leu792Phe) single nucleotide variant Inborn genetic diseases [RCV003361815] Chr5:141423601 [GRCh38]
Chr5:140803168 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.1433C>A (p.Ala478Glu) single nucleotide variant Inborn genetic diseases [RCV003376172] Chr5:141486606 [GRCh38]
Chr5:140866173 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018928.3(PCDHGC4):c.886C>T (p.His296Tyr) single nucleotide variant Inborn genetic diseases [RCV003363824] Chr5:141486059 [GRCh38]
Chr5:140865626 [GRCh37]
Chr5:5q31.3
uncertain significance
NM_018912.3(PCDHGA1):c.2502C>T (p.Thr834=) single nucleotide variant not provided [RCV003429858] Chr5:141505414 [GRCh38]
Chr5:140884981 [GRCh37]
Chr5:5q31.3
likely benign
NM_003736.4(PCDHGB4):c.2397+42563A>G single nucleotide variant not provided [RCV003428654] Chr5:141432844 [GRCh38]
Chr5:140812411 [GRCh37]
Chr5:5q31.3
benign
NM_003735.3(PCDHGA12):c.1110T>C (p.Asn370=) single nucleotide variant not provided [RCV003429856] Chr5:141431869 [GRCh38]
Chr5:140811436 [GRCh37]
Chr5:5q31.3
likely benign
NM_003735.3(PCDHGA12):c.1656G>A (p.Val552=) single nucleotide variant not provided [RCV003429857] Chr5:141432415 [GRCh38]
Chr5:140811982 [GRCh37]
Chr5:5q31.3
likely benign
NM_018928.3(PCDHGC4):c.2092G>C (p.Val698Leu) single nucleotide variant not provided [RCV003428655] Chr5:141487265 [GRCh38]
Chr5:140866832 [GRCh37]
Chr5:5q31.3
likely benign
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1152
Count of miRNA genes:638
Interacting mature miRNAs:748
Transcripts:ENST00000398594
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D5S2538  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,832,408 - 140,832,635UniSTSGRCh37
GRCh375140,831,581 - 140,832,635UniSTSGRCh37
Build 365140,812,592 - 140,812,819RGDNCBI36
Celera5136,908,400 - 136,909,454UniSTS
Celera5136,909,227 - 136,909,454RGD
Cytogenetic Map5q31UniSTS
HuRef5135,977,049 - 135,977,276UniSTS
HuRef5135,976,222 - 135,977,276UniSTS
RH91455  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,892,257 - 140,892,430UniSTSGRCh37
Build 365140,872,441 - 140,872,614RGDNCBI36
Celera5136,968,993 - 136,969,166RGD
Cytogenetic Map5q31UniSTS
HuRef5136,037,097 - 136,037,270UniSTS
GeneMap99-GB4 RH Map5531.52UniSTS
5q31-33_24  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,812,874 - 140,813,023UniSTSGRCh37
Build 365140,793,058 - 140,793,207RGDNCBI36
Celera5136,889,696 - 136,889,845RGD
Cytogenetic Map5q31UniSTS
PCDHGC3__1203  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,857,663 - 140,858,458UniSTSGRCh37
Build 365140,837,847 - 140,838,642RGDNCBI36
Celera5136,934,482 - 136,935,277RGD
HuRef5136,002,509 - 136,003,304UniSTS
PCDHGC4_2483  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,866,700 - 140,867,556UniSTSGRCh37
Build 365140,846,884 - 140,847,740RGDNCBI36
Celera5136,943,519 - 136,944,375RGD
HuRef5136,011,538 - 136,012,394UniSTS
PCDHGA10_7046  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,891,154 - 140,891,687UniSTSGRCh37
Build 365140,871,338 - 140,871,871RGDNCBI36
Celera5136,967,890 - 136,968,423RGD
HuRef5136,035,994 - 136,036,527UniSTS
AF022190  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,880,757 - 140,881,058UniSTSGRCh37
Build 365140,860,941 - 140,861,242RGDNCBI36
Celera5136,957,497 - 136,957,794RGD
Cytogenetic Map5q31UniSTS
HuRef5136,025,593 - 136,025,890UniSTS
STS-R97031  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,823,133 - 140,823,320UniSTSGRCh37
Build 365140,803,317 - 140,803,504RGDNCBI36
Celera5136,899,951 - 136,900,138RGD
Cytogenetic Map5q31UniSTS
HuRef5135,967,926 - 135,968,113UniSTS
GeneMap99-GB4 RH Map5531.52UniSTS
NCBI RH Map5889.1UniSTS
T03558  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,892,346 - 140,892,445UniSTSGRCh37
Build 365140,872,530 - 140,872,629RGDNCBI36
Celera5136,969,082 - 136,969,181RGD
Cytogenetic Map5q31UniSTS
HuRef5136,037,186 - 136,037,285UniSTS
Whitehead-YAC Contig Map5 UniSTS
SHGC-76190  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh375140,891,057 - 140,891,205UniSTSGRCh37
Build 365140,871,241 - 140,871,389RGDNCBI36
Celera5136,967,793 - 136,967,941RGD
Cytogenetic Map5q31UniSTS
HuRef5136,035,897 - 136,036,045UniSTS
TNG Radiation Hybrid Map565309.0UniSTS
GeneMap99-GB4 RH Map1673.83UniSTS
Whitehead-RH Map1829.9UniSTS
NCBI RH Map11743.5UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 326 259 61 5 6 1 275 207 348 54 216 236 4 128 126
Low 1980 1943 1414 381 694 225 4041 1934 3323 303 1138 1265 163 1076 2659 3
Below cutoff 112 527 228 216 912 218 36 49 37 54 83 92 3 3 1

Sequence


RefSeq Acc Id: ENST00000398594   ⟹   ENSP00000381594
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,417,677 - 141,512,975 (+)Ensembl
RefSeq Acc Id: ENST00000612073   ⟹   ENSP00000479132
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5141,417,645 - 141,420,429 (+)Ensembl
RefSeq Acc Id: NM_018927   ⟹   NP_061750
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,417,677 - 141,512,975 (+)NCBI
GRCh375140,797,214 - 140,892,548 (+)ENTREZGENE
Build 365140,777,466 - 140,872,730 (+)NCBI Archive
Celera5136,874,104 - 136,969,282 (+)RGD
HuRef5135,942,410 - 136,037,388 (+)ENTREZGENE
CHM1_15140,230,523 - 140,325,825 (+)NCBI
T2T-CHM13v2.05141,943,511 - 142,038,959 (+)NCBI
Sequence:
RefSeq Acc Id: NM_032101   ⟹   NP_115272
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,417,677 - 141,420,436 (+)NCBI
GRCh375140,797,214 - 140,892,548 (+)ENTREZGENE
Build 365140,777,466 - 140,780,180 (+)NCBI Archive
Celera5136,874,104 - 136,969,282 (+)RGD
HuRef5135,942,410 - 136,037,388 (+)ENTREZGENE
CHM1_15140,230,477 - 140,233,259 (+)NCBI
T2T-CHM13v2.05141,943,511 - 141,946,270 (+)NCBI
Sequence:
RefSeq Acc Id: NP_061750   ⟸   NM_018927
- Peptide Label: isoform 1 precursor
- UniProtKB: Q9UN63 (UniProtKB/Swiss-Prot),   Q9Y5F8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_115272   ⟸   NM_032101
- Peptide Label: isoform 2 precursor
- UniProtKB: Q9Y5F8 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000381594   ⟸   ENST00000398594
RefSeq Acc Id: ENSP00000479132   ⟸   ENST00000612073
Protein Domains
Cadherin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Y5F8-F1-model_v2 AlphaFold Q9Y5F8 1-929 view protein structure

Promoters
RGD ID:6871002
Promoter ID:EPDNEW_H8665
Type:initiation region
Name:PCDHGB7_1
Description:protocadherin gamma subfamily B, 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H8666  EPDNEW_H8667  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,417,677 - 141,417,737EPDNEW
RGD ID:6871004
Promoter ID:EPDNEW_H8666
Type:multiple initiation site
Name:PCDHGB7_3
Description:protocadherin gamma subfamily B, 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H8665  EPDNEW_H8667  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,419,224 - 141,419,284EPDNEW
RGD ID:6871006
Promoter ID:EPDNEW_H8667
Type:initiation region
Name:PCDHGB7_2
Description:protocadherin gamma subfamily B, 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H8665  EPDNEW_H8666  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh385141,419,427 - 141,419,487EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:8714 AgrOrtholog
COSMIC PCDHGB7 COSMIC
Ensembl Genes ENSG00000254122 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000398594 ENTREZGENE
  ENST00000398594.4 UniProtKB/Swiss-Prot
  ENST00000612073 ENTREZGENE
  ENST00000612073.1 UniProtKB/Swiss-Prot
Gene3D-CATH Cadherins UniProtKB/Swiss-Prot
GTEx ENSG00000254122 GTEx
HGNC ID HGNC:8714 ENTREZGENE
Human Proteome Map PCDHGB7 Human Proteome Map
InterPro Cadherin-like_dom UniProtKB/Swiss-Prot
  Cadherin-like_sf UniProtKB/Swiss-Prot
  Cadherin_C UniProtKB/Swiss-Prot
  Cadherin_CBD UniProtKB/Swiss-Prot
  Cadherin_CS UniProtKB/Swiss-Prot
  Cadherin_N UniProtKB/Swiss-Prot
KEGG Report hsa:56099 UniProtKB/Swiss-Prot
NCBI Gene 56099 ENTREZGENE
OMIM 606304 OMIM
PANTHER CADHERIN-87A UniProtKB/Swiss-Prot
  PROTOCADHERIN GAMMA-B7 UniProtKB/Swiss-Prot
Pfam Cadherin UniProtKB/Swiss-Prot
  Cadherin_2 UniProtKB/Swiss-Prot
  Cadherin_C_2 UniProtKB/Swiss-Prot
  Cadherin_tail UniProtKB/Swiss-Prot
PharmGKB PA33062 PharmGKB
PRINTS CADHERIN UniProtKB/Swiss-Prot
PROSITE CADHERIN_1 UniProtKB/Swiss-Prot
  CADHERIN_2 UniProtKB/Swiss-Prot
SMART SM00112 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF49313 UniProtKB/Swiss-Prot
UniProt PCDGJ_HUMAN UniProtKB/Swiss-Prot
  Q9UN63 ENTREZGENE
  Q9Y5F8 ENTREZGENE
UniProt Secondary Q9UN63 UniProtKB/Swiss-Prot