RPL22P23 (ribosomal protein L22 pseudogene 23) - Rat Genome Database

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Gene: RPL22P23 (ribosomal protein L22 pseudogene 23) Homo sapiens
Analyze
Symbol: RPL22P23
Name: ribosomal protein L22 pseudogene 23
RGD ID: 13442309
HGNC Page HGNC:53759
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: RPL22  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X136,947,751 - 136,948,133 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX136,947,748 - 136,948,133 (-)EnsemblGRCh38hg38GRCh38
GRCh37X136,029,910 - 136,030,292 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic MapXq26.3NCBI
HuRefX125,297,977 - 125,298,359 (-)NCBIHuRef
CHM1_1X135,941,588 - 135,941,970 (-)NCBICHM1_1
T2T-CHM13v2.0X135,256,501 - 135,256,883 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:47
Count of miRNA genes:46
Interacting mature miRNAs:46
Transcripts:ENST00000439143
Prediction methods:Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage
High
Medium
Low 9 6 4 1 24 1 27 1 18 2 20 4 7 15
Below cutoff 190 136 159 24 91 10 439 150 286 32 194 186 14 87 269

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000439143
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 EnsemblX136,947,748 - 136,948,133 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC RPL22P23 COSMIC
Ensembl Genes ENSG00000232379 Ensembl, ENTREZGENE
GTEx ENSG00000232379 GTEx
HGNC ID HGNC:53759 ENTREZGENE
Human Proteome Map RPL22P23 Human Proteome Map
NCBI Gene RPL22P23 ENTREZGENE