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Analyze GeneStrainQTL List |
 Gene Annotator (Functional Annotation) unavailable |
 Gene Annotator (Annotation Distribution) unavailable |
 Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable |
Gene Annotator (Functional Annotation) |
Gene Annotator (Annotation Distribution) |
Variant Visualizer (Genomic Variants) |
 InterViewer (Protein-Protein Interactions) unavailable |
 Gviewer (Genome Viewer) unavailable |
 Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable |
InterViewer (Protein-Protein Interactions) |
GViewer (Genome Viewer) |
Variant Visualizer (Damaging Variants) |
 Gene Annotator (Annotation Comparison) unavailable |
 OLGA (Gene List Generator) unavailable |
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Gene Annotator (Annotation Comparison) |
OLGA (Gene List Generator) |
Excel (Download) |
 MOET (Multi-Ontology Enrichement) unavailable |
 GOLF (Gene-Ortholog Location Finder) unavailable |
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MOET (Multi-Ontology Enrichement) |
GOLF (Gene-Ortholog Location Finder) |
Imported Annotations - ClinVar | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Term | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Monoclonal B-Cell Lymphocytosis | IAGP | RGD:11040208 | 8554872 | ClinVar Annotator: match by term: Monoclonal B-Cell Lymphocytosis | ClinVar | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene-Chemical Interaction AnnotationsGene Ontology AnnotationsDisease Annotations
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Gene-Chemical Interaction Annotations
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Gene Ontology Annotations
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References - curated| 1. | GOA_HUMAN data from the GO Consortium |
| 2. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
| 3. | RGD automated import pipeline for gene-chemical interactions |
| 4. | Xiong Y, etal., Emerg Microbes Infect. 2020 Dec;9(1):761-770. doi: 10.1080/22221751.2020.1747363. |
References - uncurated| PubMed | 12477932 12759756 12975309 14702039 16344560 17207965 19164095 21186191 21873635 25210595 26186194 28514442 30641943 32296183 |
Comparative Map Data| SLC35A5 (Homo sapiens - human) |
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| Slc35a5 (Mus musculus - house mouse) |
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| Slc35a5 (Rattus norvegicus - Norway rat) |
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| Slc35a5 (Chinchilla lanigera - long-tailed chinchilla) |
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| SLC35A5 (Pan paniscus - bonobo/pygmy chimpanzee) |
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| SLC35A5 (Canis lupus familiaris - dog) |
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| Slc35a5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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| SLC35A5 (Sus scrofa - pig) |
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| SLC35A5 (Chlorocebus sabaeus - African green monkey) |
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| Slc35a5 (Heterocephalus glaber - naked mole-rat) |
No map positions available. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Position Markers| SLC35A5_8059 |
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miRNA Target Status
| The detailed report is available here: |  | Full Report | | CSV | | TAB | | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
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RNA-SEQ Expression| alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | visual system | adipose tissue | appendage | entire extraembryonic component | pharyngeal arch | |
| High | ||||||||||||||||||
| Medium | 1135 | 1353 | 1222 | 217 | 1115 | 130 | 2115 | 483 | 2686 | 291 | 1294 | 1382 | 100 | 844 | 1281 | 4 | ||
| Low | 1304 | 1620 | 504 | 407 | 819 | 335 | 2242 | 1713 | 1048 | 128 | 166 | 231 | 74 | 1 | 360 | 1507 | 2 | 2 |
| Below cutoff | 18 | 17 | 1 |
Nucleotide Sequences| RefSeq Transcripts | NG_052994 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| NM_001348905 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_001348906 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_001348907 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_001348908 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_001348909 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_001348910 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_001348911 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| NM_017945 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| GenBank Nucleotide | AB075484 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| AC048334 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AC092692 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AK000737 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AK001992 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AK098839 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AK172825 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AK297411 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AL117531 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| AY358994 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| BC005207 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| BC010307 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| BC013046 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| CH471052 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
| DA854399 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
| RefSeq Acc Id: | ENST00000261034 ⟹ ENSP00000261034 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENST00000460615 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENST00000460713 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENST00000468642 ⟹ ENSP00000418265 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENST00000484995 ⟹ ENSP00000419958 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENST00000492406 ⟹ ENSP00000417654 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | ENST00000494706 ⟹ ENSP00000420398 | ||||||||
| RefSeq Status: | |||||||||
| Type: | CODING | ||||||||
| Position: |
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| RefSeq Acc Id: | NM_001348905 ⟹ NP_001335834 | ||||||||
| RefSeq Status: | REVIEWED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GGGCGGGACGAGGGGGCGGGGCGGCAGGCACAGCGCGCGAAGACGGGGTGCGCGATCCTCGCAChide sequence |
| RefSeq Acc Id: | NM_001348906 ⟹ NP_001335835 | ||||||||
| RefSeq Status: | REVIEWED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
CACACTTCCCTGTGTCTCGAGCCCTACTGCCTTCCTACACCTTGCCCCGCCGGAGAAAGCGGGGhide sequence |
| RefSeq Acc Id: | NM_001348907 ⟹ NP_001335836 | ||||||||
| RefSeq Status: | REVIEWED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GAGAAAGGGGCCGGGCTGGGGCGGGATAAGCCGCTTCTCCCCTCCTTCCGGAAGCGTAACACTGhide sequence |
| RefSeq Acc Id: | NM_001348908 ⟹ NP_001335837 | ||||||||
| RefSeq Status: | REVIEWED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GAGAAAGGGGCCGGGCTGGGGCGGGATAAGCCGCTTCTCCCCTCCTTCCGGAAGCGTAACACTGhide sequence |
| RefSeq Acc Id: | NM_001348909 ⟹ NP_001335838 | ||||||||
| RefSeq Status: | REVIEWED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GAGAAAGGGGCCGGGCTGGGGCGGGATAAGCCGCTTCTCCCCTCCTTCCGGAAGCGTAACACTGhide sequence |
| RefSeq Acc Id: | NM_001348910 ⟹ NP_001335839 | ||||||||
| RefSeq Status: | REVIEWED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GAGAAAGGGGCCGGGCTGGGGCGGGATAAGCCGCTTCTCCCCTCCTTCCGGAAGCGTAACACTGhide sequence |
| RefSeq Acc Id: | NM_001348911 ⟹ NP_001335840 | ||||||||
| RefSeq Status: | REVIEWED | ||||||||
| Type: | CODING | ||||||||
| Position: |
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| Sequence: |
GAGAAAGGGGCCGGGCTGGGGCGGGATAAGCCGCTTCTCCCCTCCTTCCGGAAGCGTAACACTGhide sequence |
| RefSeq Acc Id: | NM_017945 ⟹ NP_060415 | ||||||||||||||||||||||||||||
| RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||
| Type: | CODING | ||||||||||||||||||||||||||||
| Position: |
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| Sequence: |
GAGAAAGGGGCCGGGCTGGGGCGGGATAAGCCGCTTCTCCCCTCCTTCCGGAAGCGTAACACTGhide sequence |
Protein Sequences| Protein RefSeqs | NP_001335834 | (Get FASTA) | NCBI Sequence Viewer |
| NP_001335835 | (Get FASTA) | NCBI Sequence Viewer | |
| NP_001335836 | (Get FASTA) | NCBI Sequence Viewer | |
| NP_001335837 | (Get FASTA) | NCBI Sequence Viewer | |
| NP_001335838 | (Get FASTA) | NCBI Sequence Viewer | |
| NP_001335839 | (Get FASTA) | NCBI Sequence Viewer | |
| NP_001335840 | (Get FASTA) | NCBI Sequence Viewer | |
| NP_060415 | (Get FASTA) | NCBI Sequence Viewer | |
| GenBank Protein | AAH05207 | (Get FASTA) | NCBI Sequence Viewer |
| AAH10307 | (Get FASTA) | NCBI Sequence Viewer | |
| AAH13046 | (Get FASTA) | NCBI Sequence Viewer | |
| AAQ89353 | (Get FASTA) | NCBI Sequence Viewer | |
| BAA91350 | (Get FASTA) | NCBI Sequence Viewer | |
| BAD18792 | (Get FASTA) | NCBI Sequence Viewer | |
| BAG59846 | (Get FASTA) | NCBI Sequence Viewer | |
| CAH10717 | (Get FASTA) | NCBI Sequence Viewer | |
| EAW79666 | (Get FASTA) | NCBI Sequence Viewer | |
| EAW79667 | (Get FASTA) | NCBI Sequence Viewer | |
| Q9BS91 | (Get FASTA) | NCBI Sequence Viewer |
| RefSeq Acc Id: | NP_060415 ⟸ NM_017945 |
| - Peptide Label: | isoform 1 |
| - UniProtKB: | Q9BS91 (UniProtKB/Swiss-Prot) |
| - Sequence: |
MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVhide sequence |
| RefSeq Acc Id: | NP_001335835 ⟸ NM_001348906 |
| - Peptide Label: | isoform 1 |
| - Sequence: |
MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVhide sequence |
| RefSeq Acc Id: | NP_001335834 ⟸ NM_001348905 |
| - Peptide Label: | isoform 1 |
| - Sequence: |
MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVhide sequence |
| RefSeq Acc Id: | NP_001335839 ⟸ NM_001348910 |
| - Peptide Label: | isoform 4 |
| - Sequence: |
MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVhide sequence |
| RefSeq Acc Id: | NP_001335840 ⟸ NM_001348911 |
| - Peptide Label: | isoform 5 |
| - Sequence: |
MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVhide sequence |
| RefSeq Acc Id: | NP_001335838 ⟸ NM_001348909 |
| - Peptide Label: | isoform 3 |
| - Sequence: |
MAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGFHHDAFhide sequence |
| RefSeq Acc Id: | NP_001335837 ⟸ NM_001348908 |
| - Peptide Label: | isoform 2 |
| - Sequence: |
MKAMAVIFSNFSIITTALLFRIVLKRRLNWIQWASLLTLFLSIVALTAGTKTLQHNLAGRGFHHhide sequence |
| RefSeq Acc Id: | NP_001335836 ⟸ NM_001348907 |
| - Peptide Label: | isoform 1 |
| - Sequence: |
MEKQCCSHPVICSLSTMYTFLLGAIFIALSSSRILLVKYSANEENKYDYLPTTVNVCSELVKLVhide sequence |
| RefSeq Acc Id: | ENSP00000417654 ⟸ ENST00000492406 |
| RefSeq Acc Id: | ENSP00000418265 ⟸ ENST00000468642 |
| RefSeq Acc Id: | ENSP00000420398 ⟸ ENST00000494706 |
| RefSeq Acc Id: | ENSP00000419958 ⟸ ENST00000484995 |
| RefSeq Acc Id: | ENSP00000261034 ⟸ ENST00000261034 |
Promoters| RGD ID: | 6865244 | ||||||||
| Promoter ID: | EPDNEW_H5787 | ||||||||
| Type: | initiation region | ||||||||
| Name: | SLC35A5_2 | ||||||||
| Description: | solute carrier family 35 member A5 | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
| Alternative Promoters: | null; see alsoEPDNEW_H5789 | ||||||||
| Experiment Methods: | Single-end sequencing.; Paired-end sequencing. | ||||||||
| Position: |
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| RGD ID: | 6865248 | ||||||||
| Promoter ID: | EPDNEW_H5789 | ||||||||
| Type: | initiation region | ||||||||
| Name: | SLC35A5_1 | ||||||||
| Description: | solute carrier family 35 member A5 | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
| Alternative Promoters: | null; see alsoEPDNEW_H5787 | ||||||||
| Experiment Methods: | Single-end sequencing. | ||||||||
| Position: |
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| RGD ID: | 6800936 | ||||||||
| Promoter ID: | HG_KWN:45836 | ||||||||
| Type: | CpG-Island | ||||||||
| SO ACC ID: | SO:0000170 | ||||||||
| Source: | MPROMDB | ||||||||
| Tissues & Cell Lines: | CD4+TCell, CD4+TCell_12Hour, CD4+TCell_2Hour, HeLa_S3, Jurkat, K562, Lymphoblastoid, NB4 | ||||||||
| Transcripts: | ENST00000283290, ENST00000402314, NM_017945, UC010HQE.1 | ||||||||
| Position: |
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Clinical Variants| Name | Type | Condition(s) | Position(s) | Clinical significance |
| GRCh38/hg38 3q13.2-13.31(chr3:112168829-117393356)x1 | copy number loss | See cases [RCV000050766] | Chr3:112168829..117393356 [GRCh38] Chr3:111887676..117112203 [GRCh37] Chr3:113370366..118594893 [NCBI36] Chr3:3q13.2-13.31 |
pathogenic |
| GRCh38/hg38 3q11.1-21.1(chr3:93886671-123216683)x1 | copy number loss | See cases [RCV000051543] | Chr3:93886671..123216683 [GRCh38] Chr3:93605515..122935530 [GRCh37] Chr3:95088205..124418220 [NCBI36] Chr3:3q11.1-21.1 |
pathogenic |
| GRCh38/hg38 3q13.13-13.31(chr3:108242572-116169331)x1 | copy number loss | See cases [RCV000051544] | Chr3:108242572..116169331 [GRCh38] Chr3:107961419..115888178 [GRCh37] Chr3:109444109..117370868 [NCBI36] Chr3:3q13.13-13.31 |
pathogenic |
| GRCh38/hg38 3q13.2-13.31(chr3:112479482-115774102)x1 | copy number loss | See cases [RCV000051545] | Chr3:112479482..115774102 [GRCh38] Chr3:112198329..115492949 [GRCh37] Chr3:113681019..116975639 [NCBI36] Chr3:3q13.2-13.31 |
pathogenic |
| GRCh38/hg38 3q13.11-13.31(chr3:104621220-116093884)x3 | copy number gain | See cases [RCV000051722] | Chr3:104621220..116093884 [GRCh38] Chr3:104340064..115812731 [GRCh37] Chr3:105822754..117295421 [NCBI36] Chr3:3q13.11-13.31 |
pathogenic |
| GRCh38/hg38 3q11.1-13.31(chr3:93819623-116887056)x1 | copy number loss | See cases [RCV000135320] | Chr3:93819623..116887056 [GRCh38] Chr3:93538467..116605903 [GRCh37] Chr3:95021157..118088593 [NCBI36] Chr3:3q11.1-13.31 |
pathogenic |
| GRCh38/hg38 3q13.11-29(chr3:103426882-198110178)x3 | copy number gain | See cases [RCV000134948] | Chr3:103426882..198110178 [GRCh38] Chr3:103145726..197837049 [GRCh37] Chr3:104628416..199321446 [NCBI36] Chr3:3q13.11-29 |
pathogenic |
| GRCh38/hg38 3q13.2-13.31(chr3:112465096-115774102)x1 | copy number loss | See cases [RCV000135592] | Chr3:112465096..115774102 [GRCh38] Chr3:112183943..115492949 [GRCh37] Chr3:113666633..116975639 [NCBI36] Chr3:3q13.2-13.31 |
likely pathogenic |
| GRCh38/hg38 3q11.2-13.31(chr3:97795369-115663349)x1 | copy number loss | See cases [RCV000138186] | Chr3:97795369..115663349 [GRCh38] Chr3:97514213..115382196 [GRCh37] Chr3:98996903..116864886 [NCBI36] Chr3:3q11.2-13.31 |
pathogenic|uncertain significance |
| GRCh38/hg38 3q13.2-13.31(chr3:112465094-115774111)x1 | copy number loss | See cases [RCV000138434] | Chr3:112465094..115774111 [GRCh38] Chr3:112183941..115492958 [GRCh37] Chr3:113666631..116975648 [NCBI36] Chr3:3q13.2-13.31 |
pathogenic |
| GRCh38/hg38 3q11.1-24(chr3:93800620-145695381)x3 | copy number gain | See cases [RCV000142340] | Chr3:93800620..145695381 [GRCh38] Chr3:93519464..145413168 [GRCh37] Chr3:95002154..146895858 [NCBI36] Chr3:3q11.1-24 |
pathogenic |
| GRCh38/hg38 3q13.2-13.31(chr3:112425234-115795585)x1 | copy number loss | See cases [RCV000142219] | Chr3:112425234..115795585 [GRCh38] Chr3:112144081..115514432 [GRCh37] Chr3:113626771..116997122 [NCBI36] Chr3:3q13.2-13.31 |
pathogenic |
| GRCh38/hg38 3q13.2-13.33(chr3:112520553-120031022)x1 | copy number loss | See cases [RCV000142725] | Chr3:112520553..120031022 [GRCh38] Chr3:112239400..119749869 [GRCh37] Chr3:113722090..121232559 [NCBI36] Chr3:3q13.2-13.33 |
pathogenic |
| NM_017945.5(SLC35A5):c.353T>G (p.Leu118Arg) | single nucleotide variant | Monoclonal B-Cell Lymphocytosis [RCV000208563] | Chr3:112570663 [GRCh38] Chr3:112289510 [GRCh37] Chr3:3q13.2 |
uncertain significance |
| GRCh37/hg19 3q13.2-13.31(chr3:112144081-115514432)x1 | copy number loss | See cases [RCV000446223] | Chr3:112144081..115514432 [GRCh37] Chr3:3q13.2-13.31 |
pathogenic |
| GRCh37/hg19 3q13.11-13.32(chr3:105094834-117441953)x1 | copy number loss | See cases [RCV000448410] | Chr3:105094834..117441953 [GRCh37] Chr3:3q13.11-13.32 |
pathogenic |
| GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 | copy number gain | See cases [RCV000511055] | Chr3:61892..197851986 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
| GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) | copy number gain | See cases [RCV000512358] | Chr3:61892..197851986 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
| GRCh37/hg19 3q13.13-13.31(chr3:110645295-115103586)x1 | copy number loss | not provided [RCV000682294] | Chr3:110645295..115103586 [GRCh37] Chr3:3q13.13-13.31 |
pathogenic |
| GRCh37/hg19 3q13.2-13.31(chr3:111894832-116930109)x1 | copy number loss | not provided [RCV000682296] | Chr3:111894832..116930109 [GRCh37] Chr3:3q13.2-13.31 |
pathogenic |
| GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 | copy number gain | not provided [RCV000742138] | Chr3:61495..197838262 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
| GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 | copy number gain | not provided [RCV000742133] | Chr3:60174..197948027 [GRCh37] Chr3:3p26.3-q29 |
pathogenic |
| GRCh37/hg19 3q13.2(chr3:112211278-112308287)x3 | copy number gain | not provided [RCV000742694] | Chr3:112211278..112308287 [GRCh37] Chr3:3q13.2 |
benign |
| GRCh37/hg19 3q13.2-13.31(chr3:112183943-115492949)x1 | copy number loss | not provided [RCV000856645] | Chr3:112183943..115492949 [GRCh37] Chr3:3q13.2-13.31 |
pathogenic |
| GRCh37/hg19 3q13.2(chr3:111929014-112773945)x3 | copy number gain | not provided [RCV000847080] | Chr3:111929014..112773945 [GRCh37] Chr3:3q13.2 |
uncertain significance |
| GRCh37/hg19 3q13.2(chr3:111929014-112773945)x3 | copy number gain | not provided [RCV000846844] | Chr3:111929014..112773945 [GRCh37] Chr3:3q13.2 |
uncertain significance |
External Database Links| Database | Acc Id | Source(s) |
| AGR Gene | HGNC:20792 | AgrOrtholog |
| COSMIC | SLC35A5 | COSMIC |
| Ensembl Genes | ENSG00000138459 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| Ensembl Protein | ENSP00000261034 | ENTREZGENE, UniProtKB/TrEMBL |
| ENSP00000417654 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| ENSP00000418265 | UniProtKB/TrEMBL | |
| ENSP00000419958 | UniProtKB/TrEMBL | |
| ENSP00000420398 | UniProtKB/TrEMBL | |
| Ensembl Transcript | ENST00000261034 | ENTREZGENE, UniProtKB/TrEMBL |
| ENST00000468642 | UniProtKB/TrEMBL | |
| ENST00000484995 | UniProtKB/TrEMBL | |
| ENST00000492406 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| ENST00000494706 | UniProtKB/TrEMBL | |
| GTEx | ENSG00000138459 | GTEx |
| HGNC ID | HGNC:20792 | ENTREZGENE |
| Human Proteome Map | SLC35A5 | Human Proteome Map |
| InterPro | Nuc_sug_transpt | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| KEGG Report | hsa:55032 | UniProtKB/Swiss-Prot |
| NCBI Gene | 55032 | ENTREZGENE |
| PANTHER | PTHR10231 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| Pfam | Nuc_sug_transp | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
| PharmGKB | PA134947136 | PharmGKB |
| PIRSF | UDP-gal_transpt | UniProtKB/Swiss-Prot |
| UniGene | Hs.237480 | ENTREZGENE |
| UniProt | C9J7U8_HUMAN | UniProtKB/TrEMBL |
| C9JXZ8_HUMAN | UniProtKB/TrEMBL | |
| F8WDF8_HUMAN | UniProtKB/TrEMBL | |
| H7BXF8_HUMAN | UniProtKB/TrEMBL | |
| L0R547_HUMAN | UniProtKB/TrEMBL | |
| Q9BS91 | ENTREZGENE, UniProtKB/Swiss-Prot | |
| UniProt Secondary | D3DN66 | UniProtKB/Swiss-Prot |
| Q69YY6 | UniProtKB/Swiss-Prot | |
| Q6ZMD6 | UniProtKB/Swiss-Prot | |
| Q9NWM9 | UniProtKB/Swiss-Prot |
Nomenclature History| Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
|---|---|---|---|---|---|---|---|
| 2015-12-08 | SLC35A5 | solute carrier family 35 member A5 | solute carrier family 35, member A5 | Symbol and/or name change | 5135510 | APPROVED |
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| More on SLC35A5 | |
|
Alliance Gene |
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NCBI Gene |
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Ensembl Gene |
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JBrowse: hg19 hg38 |
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HGNC Report |
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NCBI Genome Data Viewer |
| RGD Object Information | |
| RGD ID: | 1344135 |
| Created: | 2005-03-08 |
| Species: | Homo sapiens |
| Last Modified: | 2020-09-16 |
| Status: | ACTIVE |
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.
