TRAPPC12 (trafficking protein particle complex subunit 12) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: TRAPPC12 (trafficking protein particle complex subunit 12) Homo sapiens
Analyze
Symbol: TRAPPC12
Name: trafficking protein particle complex subunit 12
RGD ID: 1343529
HGNC Page HGNC
Description: Involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; positive regulation of protein localization to kinetochore; and regulation of kinetochore assembly. Located in Golgi apparatus; kinetochore; and nucleoplasm. Part of TRAPP complex. Colocalizes with endoplasmic reticulum-Golgi intermediate compartment and perinuclear region of cytoplasm; INTERACTS WITH (-)-epigallocatechin 3-gallate; aflatoxin B1; aflatoxin B2.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CGI-87; FLJ36862; FLJ44560; PEBAS; tetratricopeptide repeat domain 15; tetratricopeptide repeat protein 15; TPR repeat protein 15; trafficking of membranes and mitosis; trafficking protein particle complex 12; TTC-15; TTC15
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl23,379,675 - 3,485,094 (+)EnsemblGRCh38hg38GRCh38
GRCh3823,379,245 - 3,479,571 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3723,383,465 - 3,483,336 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3623,362,453 - 3,462,349 (+)NCBINCBI36hg18NCBI36
Build 3424,921,728 - 5,021,625NCBI
Celera23,434,749 - 3,536,856 (+)NCBI
Cytogenetic Map2p25.3NCBI
HuRef23,369,367 - 3,470,799 (+)NCBIHuRef
CHM1_123,312,833 - 3,411,959 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Additional References at PubMed
PMID:10810093   PMID:14702039   PMID:15489334   PMID:16344560   PMID:19460752   PMID:20379614   PMID:20562859   PMID:21525244   PMID:21873635   PMID:22199357   PMID:23251661   PMID:25416956  
PMID:25918224   PMID:25921289   PMID:26186194   PMID:26472760   PMID:26496610   PMID:27503909   PMID:28240221   PMID:28319085   PMID:28514442   PMID:28777934   PMID:29568061   PMID:31182584  
PMID:32296183   PMID:34079125  


Genomics

Comparative Map Data
TRAPPC12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl23,379,675 - 3,485,094 (+)EnsemblGRCh38hg38GRCh38
GRCh3823,379,245 - 3,479,571 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3723,383,465 - 3,483,336 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3623,362,453 - 3,462,349 (+)NCBINCBI36hg18NCBI36
Build 3424,921,728 - 5,021,625NCBI
Celera23,434,749 - 3,536,856 (+)NCBI
Cytogenetic Map2p25.3NCBI
HuRef23,369,367 - 3,470,799 (+)NCBIHuRef
CHM1_123,312,833 - 3,411,959 (+)NCBICHM1_1
Trappc12
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391228,740,619 - 28,801,746 (-)NCBIGRCm39mm39
GRCm39 Ensembl1228,740,627 - 28,800,471 (-)Ensembl
GRCm381228,690,620 - 28,750,485 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1228,690,628 - 28,750,472 (-)EnsemblGRCm38mm10GRCm38
MGSCv371229,375,493 - 29,435,318 (-)NCBIGRCm37mm9NCBIm37
MGSCv361229,277,283 - 29,336,650 (-)NCBImm8
Celera1230,183,651 - 30,243,945 (-)NCBICelera
Cytogenetic Map12A2NCBI
Trappc12
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2645,321,496 - 45,386,967 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl645,321,497 - 45,386,952 (-)Ensembl
Rnor_6.0647,954,822 - 48,020,280 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl647,955,310 - 48,020,271 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0656,656,858 - 56,722,308 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4646,567,200 - 46,632,324 (-)NCBIRGSC3.4rn4RGSC3.4
Celera644,544,476 - 44,609,939 (-)NCBICelera
Cytogenetic Map6q16NCBI
Trappc12
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554873,824,872 - 3,864,331 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554873,824,872 - 3,863,859 (-)NCBIChiLan1.0ChiLan1.0
TRAPPC12
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A3,311,765 - 3,411,768 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A3,311,765 - 3,411,768 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A3,388,191 - 3,490,496 (+)NCBIMhudiblu_PPA_v0panPan3
TRAPPC12
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1171,988,952 - 2,072,854 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl171,999,613 - 2,072,502 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha171,974,475 - 2,058,834 (+)NCBI
ROS_Cfam_1.0172,082,687 - 2,166,471 (+)NCBI
UMICH_Zoey_3.1171,978,309 - 2,051,719 (+)NCBI
UNSW_CanFamBas_1.0171,988,778 - 2,073,092 (+)NCBI
UU_Cfam_GSD_1.0171,990,618 - 2,074,262 (+)NCBI
Trappc12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629246,858,177 - 46,919,568 (+)NCBI
SpeTri2.0NW_0049365321,613,181 - 1,674,556 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TRAPPC12
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3131,307,204 - 131,358,001 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13131,307,185 - 131,357,996 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23140,477,383 - 140,567,869 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TRAPPC12
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.114104,191,735 - 104,315,340 (-)NCBI
ChlSab1.1 Ensembl14104,191,842 - 104,306,587 (-)Ensembl
Vero_WHO_p1.0NW_0236660457,931,317 - 8,109,254 (+)NCBI
Trappc12
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248465,211,359 - 5,249,332 (-)NCBI

Position Markers
D2S319  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3723,427,064 - 3,427,191UniSTSGRCh37
GRCh3723,427,067 - 3,427,196UniSTSGRCh37
Build 3623,406,071 - 3,406,198RGDNCBI36
Celera23,480,348 - 3,480,477RGD
Celera23,480,351 - 3,480,482UniSTS
Cytogenetic Map2p25.3UniSTS
HuRef23,415,143 - 3,415,276UniSTS
HuRef23,415,140 - 3,415,271UniSTS
Marshfield Genetic Map27.6UniSTS
Marshfield Genetic Map27.6RGD
Genethon Genetic Map26.0UniSTS
TNG Radiation Hybrid Map23121.0UniSTS
deCODE Assembly Map27.6UniSTS
GeneMap99-GB4 RH Map225.84UniSTS
Whitehead-RH Map231.4UniSTS
Whitehead-YAC Contig Map2 UniSTS
NCBI RH Map210.0UniSTS
RH92776  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3723,425,989 - 3,426,113UniSTSGRCh37
Build 3623,404,996 - 3,405,120RGDNCBI36
Celera23,479,273 - 3,479,397RGD
Cytogenetic Map2p25.3UniSTS
HuRef23,414,065 - 3,414,189UniSTS
GeneMap99-GB4 RH Map222.48UniSTS
G62096  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3723,483,109 - 3,483,253UniSTSGRCh37
Build 3623,462,116 - 3,462,260RGDNCBI36
Celera23,536,623 - 3,536,767RGD
Cytogenetic Map2p25.3UniSTS
HuRef23,470,566 - 3,470,710UniSTS
D2S1503E  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3723,394,019 - 3,394,085UniSTSGRCh37
Build 3623,373,026 - 3,373,092RGDNCBI36
Celera23,445,299 - 3,445,365RGD
Cytogenetic Map2p25.3UniSTS
HuRef23,379,937 - 3,380,003UniSTS
TTC15_9666  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3723,483,007 - 3,483,535UniSTSGRCh37
Build 3623,462,014 - 3,462,542RGDNCBI36
Celera23,536,521 - 3,537,049RGD
HuRef23,470,464 - 3,470,992UniSTS
RH65207  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3723,488,631 - 3,488,756UniSTSGRCh37
Build 3623,467,638 - 3,467,763RGDNCBI36
Celera23,542,144 - 3,542,269RGD
Cytogenetic Map2p25.3UniSTS
HuRef23,476,095 - 3,476,220UniSTS
GeneMap99-GB4 RH Map222.28UniSTS
NCBI RH Map213.9UniSTS
D2S319  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2p25.3UniSTS
GeneMap99-GB4 RH Map225.84UniSTS
NCBI RH Map216.5UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5225
Count of miRNA genes:1087
Interacting mature miRNAs:1370
Transcripts:ENST00000324266, ENST00000382110, ENST00000411973, ENST00000415624, ENST00000416918, ENST00000417243, ENST00000433382, ENST00000437733, ENST00000441099, ENST00000441983, ENST00000452495, ENST00000457845, ENST00000461577, ENST00000462983, ENST00000469147, ENST00000469400, ENST00000473348, ENST00000479897, ENST00000479955, ENST00000482645, ENST00000489032, ENST00000493792, ENST00000497597
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High
Medium 2192 2187 1382 303 1349 147 4099 1722 2635 236 1416 1511 169 1157 2557 2
Low 241 800 341 319 598 317 256 471 1073 182 33 98 3 47 231 2
Below cutoff 1 2 2 3 1 1 12 1 5 3 3 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001321102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_016030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011510356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017004257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001738761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001738762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_426956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC073502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC114810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC216281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF151845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI270453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK094181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK094194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK094242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK098327 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK125105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK126524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC014164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ954367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU782660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA031172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000324266   ⟹   ENSP00000324318
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,379,694 - 3,479,565 (+)Ensembl
RefSeq Acc Id: ENST00000382110   ⟹   ENSP00000371544
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,379,675 - 3,479,567 (+)Ensembl
RefSeq Acc Id: ENST00000411973   ⟹   ENSP00000405626
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,388,127 - 3,421,970 (+)Ensembl
RefSeq Acc Id: ENST00000415624   ⟹   ENSP00000396592
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,443,868 - 3,479,571 (+)Ensembl
RefSeq Acc Id: ENST00000416918   ⟹   ENSP00000395420
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,465,673 - 3,479,567 (+)Ensembl
RefSeq Acc Id: ENST00000417243   ⟹   ENSP00000399909
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,421,883 - 3,479,567 (+)Ensembl
RefSeq Acc Id: ENST00000433382
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,443,726 - 3,478,871 (+)Ensembl
RefSeq Acc Id: ENST00000437733   ⟹   ENSP00000406497
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,460,301 - 3,478,913 (+)Ensembl
RefSeq Acc Id: ENST00000441099   ⟹   ENSP00000399010
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,424,619 - 3,458,181 (+)Ensembl
RefSeq Acc Id: ENST00000441983   ⟹   ENSP00000409960
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,389,694 - 3,460,303 (+)Ensembl
RefSeq Acc Id: ENST00000452495   ⟹   ENSP00000396407
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,477,715 - 3,485,094 (+)Ensembl
RefSeq Acc Id: ENST00000457845   ⟹   ENSP00000401013
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,389,686 - 3,443,806 (+)Ensembl
RefSeq Acc Id: ENST00000461577
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,459,931 - 3,478,916 (+)Ensembl
RefSeq Acc Id: ENST00000462983
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,443,792 - 3,460,942 (+)Ensembl
RefSeq Acc Id: ENST00000469147
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,424,598 - 3,468,006 (+)Ensembl
RefSeq Acc Id: ENST00000469400
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,472,421 - 3,479,567 (+)Ensembl
RefSeq Acc Id: ENST00000473348
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,458,313 - 3,478,913 (+)Ensembl
RefSeq Acc Id: ENST00000479897
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,443,796 - 3,465,807 (+)Ensembl
RefSeq Acc Id: ENST00000479955
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,449,196 - 3,460,327 (+)Ensembl
RefSeq Acc Id: ENST00000482645
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,379,720 - 3,389,000 (+)Ensembl
RefSeq Acc Id: ENST00000489032
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,460,282 - 3,478,101 (+)Ensembl
RefSeq Acc Id: ENST00000493792
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,478,714 - 3,479,565 (+)Ensembl
RefSeq Acc Id: ENST00000497597
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl23,454,612 - 3,479,566 (+)Ensembl
RefSeq Acc Id: NM_001321102   ⟹   NP_001308031
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,694 - 3,479,565 (+)NCBI
CHM1_123,312,833 - 3,411,959 (+)NCBI
Sequence:
RefSeq Acc Id: NM_016030   ⟹   NP_057114
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,694 - 3,479,565 (+)NCBI
GRCh3723,383,446 - 3,483,342 (+)RGD
Build 3623,362,453 - 3,462,349 (+)NCBI Archive
Celera23,434,749 - 3,536,856 (+)RGD
HuRef23,369,367 - 3,470,799 (+)RGD
CHM1_123,312,833 - 3,411,959 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510350   ⟹   XP_011508652
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,479,571 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510352   ⟹   XP_011508654
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,464,486 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510353   ⟹   XP_011508655
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,457,611 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510354   ⟹   XP_011508656
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,453,934 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510355   ⟹   XP_011508657
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,389,822 - 3,479,571 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011510356   ⟹   XP_011508658
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,389,694 - 3,479,571 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017004257   ⟹   XP_016859746
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,466,960 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001738761
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,460,336 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001738762
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,479,540 (+)NCBI
Sequence:
RefSeq Acc Id: XR_426956
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,245 - 3,479,571 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_057114   ⟸   NM_016030
- UniProtKB: Q8WVT3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011508655   ⟸   XM_011510353
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011508656   ⟸   XM_011510354
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011508654   ⟸   XM_011510352
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011508652   ⟸   XM_011510350
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_011508658   ⟸   XM_011510356
- Peptide Label: isoform X7
- UniProtKB: A0A0J9YXQ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011508657   ⟸   XM_011510355
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: NP_001308031   ⟸   NM_001321102
- UniProtKB: Q8WVT3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016859746   ⟸   XM_017004257
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSP00000406497   ⟸   ENST00000437733
RefSeq Acc Id: ENSP00000405626   ⟸   ENST00000411973
RefSeq Acc Id: ENSP00000396407   ⟸   ENST00000452495
RefSeq Acc Id: ENSP00000396592   ⟸   ENST00000415624
RefSeq Acc Id: ENSP00000409960   ⟸   ENST00000441983
RefSeq Acc Id: ENSP00000395420   ⟸   ENST00000416918
RefSeq Acc Id: ENSP00000399010   ⟸   ENST00000441099
RefSeq Acc Id: ENSP00000324318   ⟸   ENST00000324266
RefSeq Acc Id: ENSP00000399909   ⟸   ENST00000417243
RefSeq Acc Id: ENSP00000401013   ⟸   ENST00000457845
RefSeq Acc Id: ENSP00000371544   ⟸   ENST00000382110
Protein Domains
TPR_REGION

Promoters
RGD ID:6798365
Promoter ID:HG_KWN:31352
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000304601,   NM_016030,   UC002QXL.1,   UC002QXN.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3623,362,261 - 3,362,761 (+)MPROMDB
RGD ID:6798368
Promoter ID:HG_KWN:31353
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000322603,   UC010EWM.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3623,370,751 - 3,371,251 (+)MPROMDB
RGD ID:6859546
Promoter ID:EPDNEW_H2938
Type:initiation region
Name:TRAPPC12_1
Description:trafficking protein particle complex 12
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3823,379,722 - 3,379,782EPDNEW
RGD ID:6798363
Promoter ID:HG_KWN:31362
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:HeLa_S3,   Lymphoblastoid
Transcripts:OTTHUMT00000322609,   OTTHUMT00000322618,   OTTHUMT00000322620
Position:
Human AssemblyChrPosition (strand)Source
Build 3623,442,319 - 3,442,819 (+)MPROMDB
RGD ID:6798367
Promoter ID:HG_KWN:31363
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Jurkat
Transcripts:OTTHUMT00000322619
Position:
Human AssemblyChrPosition (strand)Source
Build 3623,447,911 - 3,448,411 (+)MPROMDB
RGD ID:6798366
Promoter ID:HG_KWN:31364
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000322613
Position:
Human AssemblyChrPosition (strand)Source
Build 3623,453,956 - 3,454,456 (+)MPROMDB

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 2p25.3-24.3(chr2:30141-14494040)x3 copy number gain See cases [RCV000052928] Chr2:30141..14494040 [GRCh38]
Chr2:30141..14634164 [GRCh37]
Chr2:20141..14551615 [NCBI36]
Chr2:2p25.3-24.3
pathogenic
GRCh38/hg38 2p25.3-23.1(chr2:30141-31766749)x3 copy number gain See cases [RCV000052929] Chr2:30141..31766749 [GRCh38]
Chr2:30141..31991818 [GRCh37]
Chr2:20141..31845322 [NCBI36]
Chr2:2p25.3-23.1
pathogenic
GRCh38/hg38 2p25.3-24.3(chr2:30342-14866951)x3 copy number gain See cases [RCV000052931] Chr2:30342..14866951 [GRCh38]
Chr2:30342..15007075 [GRCh37]
Chr2:20342..14924526 [NCBI36]
Chr2:2p25.3-24.3
pathogenic
GRCh38/hg38 2p25.3-25.1(chr2:50661-9652907)x3 copy number gain See cases [RCV000052932] Chr2:50661..9652907 [GRCh38]
Chr2:50661..9793036 [GRCh37]
Chr2:40661..9710487 [NCBI36]
Chr2:2p25.3-25.1
pathogenic
GRCh38/hg38 2p25.3-16.1(chr2:66097-55570637)x3 copy number gain See cases [RCV000052933] Chr2:66097..55570637 [GRCh38]
Chr2:66097..55797773 [GRCh37]
Chr2:56097..55651277 [NCBI36]
Chr2:2p25.3-16.1
pathogenic
GRCh38/hg38 2p25.3(chr2:2542162-3678127)x3 copy number gain See cases [RCV000052599] Chr2:2542162..3678127 [GRCh38]
Chr2:2545934..3725717 [GRCh37]
Chr2:2524941..3703592 [NCBI36]
Chr2:2p25.3
uncertain significance
GRCh38/hg38 2p25.3(chr2:3293776-3858635)x3 copy number gain See cases [RCV000052625] Chr2:3293776..3858635 [GRCh38]
Chr2:3297547..3906225 [GRCh37]
Chr2:3276554..3884100 [NCBI36]
Chr2:2p25.3
uncertain significance
GRCh38/hg38 2p25.3-25.2(chr2:30341-4932359)x3 copy number gain See cases [RCV000133936] Chr2:30341..4932359 [GRCh38]
Chr2:30341..4979949 [GRCh37]
Chr2:20341..4957824 [NCBI36]
Chr2:2p25.3-25.2
pathogenic
GRCh38/hg38 2p25.3-23.2(chr2:30341-28419664)x3 copy number gain See cases [RCV000135398] Chr2:30341..28419664 [GRCh38]
Chr2:30341..28642531 [GRCh37]
Chr2:20341..28496035 [NCBI36]
Chr2:2p25.3-23.2
pathogenic
GRCh38/hg38 2p25.3(chr2:30341-3449132)x1 copy number loss See cases [RCV000135536] Chr2:30341..3449132 [GRCh38]
Chr2:30341..3452903 [GRCh37]
Chr2:20341..3431910 [NCBI36]
Chr2:2p25.3
pathogenic
GRCh38/hg38 2p25.3-23.3(chr2:17019-26318846)x3 copy number gain See cases [RCV000137344] Chr2:17019..26318846 [GRCh38]
Chr2:17019..26541714 [GRCh37]
Chr2:7019..26395218 [NCBI36]
Chr2:2p25.3-23.3
pathogenic
GRCh38/hg38 2p25.3(chr2:1844295-3488792)x3 copy number gain See cases [RCV000138141] Chr2:1844295..3488792 [GRCh38]
Chr2:1848067..3492563 [GRCh37]
Chr2:1827074..3471570 [NCBI36]
Chr2:2p25.3
uncertain significance
GRCh38/hg38 2p25.3-24.1(chr2:1664615-23664142)x3 copy number gain See cases [RCV000137913] Chr2:1664615..23664142 [GRCh38]
Chr2:1668387..23887012 [GRCh37]
Chr2:1647394..23740517 [NCBI36]
Chr2:2p25.3-24.1
pathogenic|likely pathogenic
GRCh38/hg38 2p25.3-25.2(chr2:2797196-4697562)x3 copy number gain See cases [RCV000138364] Chr2:2797196..4697562 [GRCh38]
Chr2:2800968..4745152 [GRCh37]
Chr2:2779975..4723027 [NCBI36]
Chr2:2p25.3-25.2
uncertain significance
GRCh38/hg38 2p25.3(chr2:3288311-3410171)x3 copy number gain See cases [RCV000140140] Chr2:3288311..3410171 [GRCh38]
Chr2:3292082..3413942 [GRCh37]
Chr2:3271089..3392949 [NCBI36]
Chr2:2p25.3
likely benign
GRCh38/hg38 2p25.3-24.1(chr2:17019-20001056)x3 copy number gain See cases [RCV000141226] Chr2:17019..20001056 [GRCh38]
Chr2:17019..20200817 [GRCh37]
Chr2:7019..20064298 [NCBI36]
Chr2:2p25.3-24.1
pathogenic
GRCh38/hg38 2p25.3-25.2(chr2:17019-4957745)x3 copy number gain See cases [RCV000140981] Chr2:17019..4957745 [GRCh38]
Chr2:17019..5005335 [GRCh37]
Chr2:7019..4983210 [NCBI36]
Chr2:2p25.3-25.2
likely pathogenic
GRCh38/hg38 2p25.3-22.3(chr2:12770-33711509)x3 copy number gain See cases [RCV000141829] Chr2:12770..33711509 [GRCh38]
Chr2:12770..33936576 [GRCh37]
Chr2:2770..33790080 [NCBI36]
Chr2:2p25.3-22.3
pathogenic
GRCh38/hg38 2p25.3-23.3(chr2:12770-25039694)x3 copy number gain See cases [RCV000141877] Chr2:12770..25039694 [GRCh38]
Chr2:12770..25262563 [GRCh37]
Chr2:2770..25116067 [NCBI36]
Chr2:2p25.3-23.3
pathogenic
GRCh38/hg38 2p25.3-25.2(chr2:30341-4642399)x3 copy number gain See cases [RCV000142735] Chr2:30341..4642399 [GRCh38]
Chr2:30341..4689989 [GRCh37]
Chr2:20341..4667864 [NCBI36]
Chr2:2p25.3-25.2
pathogenic
GRCh38/hg38 2p25.3-21(chr2:236816-45983232)x3 copy number gain See cases [RCV000143682] Chr2:236816..45983232 [GRCh38]
Chr2:236816..46210371 [GRCh37]
Chr2:226816..46063875 [NCBI36]
Chr2:2p25.3-21
pathogenic
GRCh38/hg38 2p25.3(chr2:12770-4318861)x3 copy number gain See cases [RCV000143781] Chr2:12770..4318861 [GRCh38]
Chr2:12770..4366451 [GRCh37]
Chr2:2770..4344326 [NCBI36]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.1880C>T (p.Ala627Val) single nucleotide variant Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV000505655]|Inborn genetic diseases [RCV001266657]|Progressive childhood encephalopathy [RCV000496094] Chr2:3478848 [GRCh38]
Chr2:3482619 [GRCh37]
Chr2:2p25.3
pathogenic|uncertain significance
NM_016030.6(TRAPPC12):c.145del (p.Glu49fs) deletion Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV000505545] Chr2:3387768 [GRCh38]
Chr2:3391539 [GRCh37]
Chr2:2p25.3
pathogenic|likely pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384) copy number gain See cases [RCV000512056] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
NM_016030.6(TRAPPC12):c.360dup (p.Glu121fs) duplication Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV000505613]|Progressive childhood encephalopathy [RCV000496091] Chr2:3387978..3387979 [GRCh38]
Chr2:3391749..3391750 [GRCh37]
Chr2:2p25.3
pathogenic
GRCh37/hg19 2p25.3-24.1(chr2:12770-20081474)x3 copy number gain See cases [RCV000510934] Chr2:12770..20081474 [GRCh37]
Chr2:2p25.3-24.1
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:12771-242783384)x3 copy number gain See cases [RCV000511212] Chr2:12771..242783384 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.3-25.2(chr2:12770-4823625)x3 copy number gain not provided [RCV000682156] Chr2:12770..4823625 [GRCh37]
Chr2:2p25.3-25.2
pathogenic
GRCh37/hg19 2p25.3(chr2:2612107-3455133)x3 copy number gain not provided [RCV000682105] Chr2:2612107..3455133 [GRCh37]
Chr2:2p25.3
uncertain significance
GRCh37/hg19 2p25.3-q37.3(chr2:15672-243101834)x3 copy number gain not provided [RCV000752804] Chr2:15672..243101834 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
GRCh37/hg19 2p25.3-q37.3(chr2:14238-243048760)x3 copy number gain not provided [RCV000752802] Chr2:14238..243048760 [GRCh37]
Chr2:2p25.3-q37.3
pathogenic
NM_016030.6(TRAPPC12):c.1709C>T (p.Ser570Leu) single nucleotide variant not provided [RCV000881722] Chr2:3465628 [GRCh38]
Chr2:3469399 [GRCh37]
Chr2:2p25.3
likely benign
NM_016030.6(TRAPPC12):c.1347A>G (p.Glu449=) single nucleotide variant not provided [RCV000971352] Chr2:3424593 [GRCh38]
Chr2:3428364 [GRCh37]
Chr2:2p25.3
benign
GRCh37/hg19 2p25.3(chr2:3202277-3397677)x1 copy number loss not provided [RCV001005224] Chr2:3202277..3397677 [GRCh37]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.1965+4A>G single nucleotide variant not provided [RCV000997025] Chr2:3478937 [GRCh38]
Chr2:3482708 [GRCh37]
Chr2:2p25.3
likely pathogenic|uncertain significance
GRCh37/hg19 2p25.3(chr2:3297005-3424503)x1 copy number loss not provided [RCV000848007] Chr2:3297005..3424503 [GRCh37]
Chr2:2p25.3
uncertain significance
GRCh37/hg19 2p25.3(chr2:12770-3819558)x3 copy number gain not provided [RCV000846909] Chr2:12770..3819558 [GRCh37]
Chr2:2p25.3
uncertain significance
GRCh37/hg19 2p25.3-25.1(chr2:12770-7502796)x3 copy number gain not provided [RCV000847256] Chr2:12770..7502796 [GRCh37]
Chr2:2p25.3-25.1
pathogenic
GRCh37/hg19 2p25.3-25.1(chr2:12770-7502796)x3 copy number gain not provided [RCV000847257] Chr2:12770..7502796 [GRCh37]
Chr2:2p25.3-25.1
pathogenic
GRCh37/hg19 2p25.3(chr2:3385474-3418641)x1 copy number loss not provided [RCV000849636] Chr2:3385474..3418641 [GRCh37]
Chr2:2p25.3
pathogenic
GRCh37/hg19 2p25.3(chr2:3001017-3494850)x3 copy number gain not provided [RCV001005223] Chr2:3001017..3494850 [GRCh37]
Chr2:2p25.3
likely benign
GRCh37/hg19 2p25.3(chr2:1045542-4104255)x3 copy number gain not provided [RCV001005221] Chr2:1045542..4104255 [GRCh37]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.519C>T (p.Asp173=) single nucleotide variant not provided [RCV000946587] Chr2:3388142 [GRCh38]
Chr2:3391913 [GRCh37]
Chr2:2p25.3
benign
GRCh37/hg19 2p25.3(chr2:3425359-3504178)x1 copy number loss not provided [RCV001005225] Chr2:3425359..3504178 [GRCh37]
Chr2:2p25.3
uncertain significance
GRCh37/hg19 2p25.3(chr2:2074335-3934366)x3 copy number gain not provided [RCV001259634] Chr2:2074335..3934366 [GRCh37]
Chr2:2p25.3
pathogenic
GRCh37/hg19 2p25.3-25.2(chr2:3385474-4974948)x3 copy number gain not provided [RCV001259638] Chr2:3385474..4974948 [GRCh37]
Chr2:2p25.3-25.2
uncertain significance
GRCh37/hg19 2p25.3-25.2(chr2:2529149-5511339)x3 copy number gain not provided [RCV001259639] Chr2:2529149..5511339 [GRCh37]
Chr2:2p25.3-25.2
uncertain significance
NM_016030.6(TRAPPC12):c.1530+1G>A single nucleotide variant Inborn genetic diseases [RCV001266656] Chr2:3443892 [GRCh38]
Chr2:3447663 [GRCh37]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.641C>T (p.Ala214Val) single nucleotide variant Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV001335787] Chr2:3388264 [GRCh38]
Chr2:3392035 [GRCh37]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.1597A>G (p.Arg533Gly) single nucleotide variant Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV001330895] Chr2:3457687 [GRCh38]
Chr2:3461458 [GRCh37]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.361G>T (p.Glu121Ter) single nucleotide variant Severe hydrocephalus [RCV001328497] Chr2:3387984 [GRCh38]
Chr2:3391755 [GRCh37]
Chr2:2p25.3
likely pathogenic
NM_016030.6(TRAPPC12):c.1842T>C (p.Asp614=) single nucleotide variant not provided [RCV001539343] Chr2:3477760 [GRCh38]
Chr2:3481531 [GRCh37]
Chr2:2p25.3
benign
NM_016030.6(TRAPPC12):c.1604-1G>T single nucleotide variant Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV001330896] Chr2:3460262 [GRCh38]
Chr2:3464033 [GRCh37]
Chr2:2p25.3
likely pathogenic
NM_016030.6(TRAPPC12):c.496C>A (p.Arg166Ser) single nucleotide variant Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV001330897] Chr2:3388119 [GRCh38]
Chr2:3391890 [GRCh37]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.1394C>T (p.Pro465Leu) single nucleotide variant Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV001330894] Chr2:3424640 [GRCh38]
Chr2:3428411 [GRCh37]
Chr2:2p25.3
uncertain significance
NM_016030.6(TRAPPC12):c.1892T>G (p.Leu631Arg) single nucleotide variant Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome [RCV001376689] Chr2:3478860 [GRCh38]
Chr2:3482631 [GRCh37]
Chr2:2p25.3
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:24284 AgrOrtholog
COSMIC TRAPPC12 COSMIC
Ensembl Genes ENSG00000171853 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSG00000274891 UniProtKB/TrEMBL
Ensembl Protein ENSP00000324318 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000371544 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000395420 UniProtKB/TrEMBL
  ENSP00000396407 UniProtKB/TrEMBL
  ENSP00000396592 UniProtKB/TrEMBL
  ENSP00000399010 UniProtKB/TrEMBL
  ENSP00000399909 UniProtKB/TrEMBL
  ENSP00000401013 UniProtKB/TrEMBL
  ENSP00000405626 UniProtKB/TrEMBL
  ENSP00000406497 UniProtKB/TrEMBL
  ENSP00000409960 UniProtKB/TrEMBL
  ENSP00000481735 UniProtKB/TrEMBL
  ENSP00000486221 UniProtKB/TrEMBL
  ENSP00000488507 UniProtKB/TrEMBL
Ensembl Transcript ENST00000324266 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000382110 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000411973 UniProtKB/TrEMBL
  ENST00000415624 UniProtKB/TrEMBL
  ENST00000416918 UniProtKB/TrEMBL
  ENST00000417243 UniProtKB/TrEMBL
  ENST00000437733 UniProtKB/TrEMBL
  ENST00000441099 UniProtKB/TrEMBL
  ENST00000441983 UniProtKB/TrEMBL
  ENST00000452495 UniProtKB/TrEMBL
  ENST00000457845 UniProtKB/TrEMBL
  ENST00000618133 UniProtKB/TrEMBL
  ENST00000628660 UniProtKB/TrEMBL
  ENST00000631737 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000171853 GTEx
  ENSG00000274891 GTEx
HGNC ID HGNC:24284 ENTREZGENE
Human Proteome Map TRAPPC12 Human Proteome Map
InterPro TPR-contain_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_repeat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:51112 UniProtKB/Swiss-Prot
NCBI Gene 51112 ENTREZGENE
OMIM 614139 OMIM
  617669 OMIM
Pfam TPR_6 UniProtKB/TrEMBL
PharmGKB PA134944710 PharmGKB
PROSITE TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TPR_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART TPR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48452 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2JQW1_HUMAN UniProtKB/TrEMBL
  A0A0J9YXQ9 ENTREZGENE, UniProtKB/TrEMBL
  F8WCB4_HUMAN UniProtKB/TrEMBL
  H0Y550_HUMAN UniProtKB/TrEMBL
  H7C0K3_HUMAN UniProtKB/TrEMBL
  H7C0T3_HUMAN UniProtKB/TrEMBL
  H7C185_HUMAN UniProtKB/TrEMBL
  H7C1E5_HUMAN UniProtKB/TrEMBL
  H7C1M4_HUMAN UniProtKB/TrEMBL
  H7C2F7_HUMAN UniProtKB/TrEMBL
  H7C373_HUMAN UniProtKB/TrEMBL
  Q53QD4_HUMAN UniProtKB/TrEMBL
  Q8WVT3 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B3KV01 UniProtKB/Swiss-Prot
  D6W4Y2 UniProtKB/Swiss-Prot
  Q8WVW1 UniProtKB/Swiss-Prot
  Q9Y395 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-02-15 TRAPPC12  trafficking protein particle complex subunit 12  TRAPPC12  trafficking protein particle complex 12  Symbol and/or name change 19259463 PROVISIONAL
2011-12-20 TRAPPC12  trafficking protein particle complex 12  TTC15  tetratricopeptide repeat domain 15  Symbol and/or name change 5135510 APPROVED