TRIM5 (tripartite motif containing 5) - Rat Genome Database

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Gene: TRIM5 (tripartite motif containing 5) Homo sapiens
Analyze
Symbol: TRIM5
Name: tripartite motif containing 5
RGD ID: 1343210
HGNC Page HGNC
Description: Enables several functions, including protein homodimerization activity; transcription coactivator activity; and ubiquitin-protein transferase activity. Involved in several processes, including positive regulation of NF-kappaB transcription factor activity; protein K63-linked ubiquitination; and regulation of signal transduction. Located in P-body. Colocalizes with omegasome.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: ring finger protein 88; RING-type E3 ubiquitin transferase TRIM5; RNF88; TRIM5alpha; tripartite motif containing 5 transcript variant iota; tripartite motif containing 5 transcript variant kappa; tripartite motif protein TRIM; tripartite motif protein TRIM5; tripartite motif-containing 5; tripartite motif-containing protein 5
RGD Orthologs
Mouse
Rat
Bonobo
Pig
Green Monkey
Alliance Genes
More Info more info ...
Related Pseudogenes: TRIM80P  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl115,663,195 - 5,938,619 (-)EnsemblGRCh38hg38GRCh38
GRCh38115,590,906 - 5,685,108 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37115,684,425 - 5,706,304 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36115,641,364 - 5,662,869 (-)NCBINCBI36hg18NCBI36
Build 34115,641,368 - 5,662,869NCBI
Celera115,803,483 - 5,825,436 (-)NCBI
Cytogenetic Map11p15.4NCBI
HuRef115,344,050 - 5,365,972 (-)NCBIHuRef
CHM1_1115,683,377 - 5,705,274 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IDA)
cytosol  (IBA,TAS)
nucleoplasm  (IBA)
omegasome  (IDA)
P-body  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

Additional References at PubMed
PMID:11331580   PMID:12477932   PMID:12878161   PMID:14702039   PMID:14985764   PMID:15146197   PMID:15249685   PMID:15249687   PMID:15249690   PMID:15280539   PMID:15489334   PMID:15649369  
PMID:15709033   PMID:15767395   PMID:15919943   PMID:15967037   PMID:15994791   PMID:16226405   PMID:16254380   PMID:16289103   PMID:16344560   PMID:16401428   PMID:16472833   PMID:16474118  
PMID:16474153   PMID:16498413   PMID:16501094   PMID:16624363   PMID:16643975   PMID:16775307   PMID:16808955   PMID:16809279   PMID:16828831   PMID:16887163   PMID:16912305   PMID:16956947  
PMID:16973579   PMID:17028189   PMID:17083721   PMID:17087820   PMID:17135314   PMID:17156811   PMID:17207965   PMID:17392513   PMID:17406861   PMID:17504171   PMID:17543365   PMID:17588933  
PMID:17609277   PMID:17626085   PMID:17728224   PMID:17855543   PMID:17897064   PMID:18029348   PMID:18063779   PMID:18166079   PMID:18248090   PMID:18248091   PMID:18279037   PMID:18312418  
PMID:18367226   PMID:18406133   PMID:18417575   PMID:18497858   PMID:18524394   PMID:18586294   PMID:18613956   PMID:18678385   PMID:18789977   PMID:18799573   PMID:18799578   PMID:18976462  
PMID:18976920   PMID:18977142   PMID:19020830   PMID:19056509   PMID:19153241   PMID:19254360   PMID:19388851   PMID:19401538   PMID:19549727   PMID:19577266   PMID:19656869   PMID:19694548  
PMID:19710594   PMID:19741300   PMID:19825046   PMID:19902255   PMID:19943174   PMID:20001730   PMID:20012523   PMID:20018238   PMID:20049904   PMID:20053985   PMID:20211142   PMID:20357094  
PMID:20360068   PMID:20395553   PMID:20410272   PMID:20493962   PMID:20588169   PMID:20609213   PMID:20619429   PMID:20638642   PMID:20702630   PMID:20721640   PMID:20810659   PMID:20929586  
PMID:20956011   PMID:20962083   PMID:21035162   PMID:21083892   PMID:21107267   PMID:21169362   PMID:21187419   PMID:21247355   PMID:21264255   PMID:21455494   PMID:21483490   PMID:21490953  
PMID:21512569   PMID:21512573   PMID:21568899   PMID:21572451   PMID:21575157   PMID:21575904   PMID:21632761   PMID:21680743   PMID:21734049   PMID:21734563   PMID:21734566   PMID:21741003  
PMID:21743322   PMID:21784078   PMID:21866272   PMID:21873635   PMID:21917976   PMID:21994560   PMID:21994740   PMID:22078707   PMID:22291694   PMID:22421880   PMID:22435067   PMID:22482711  
PMID:22493164   PMID:22515365   PMID:22553496   PMID:22647704   PMID:22701176   PMID:22829933   PMID:22855686   PMID:22999946   PMID:23043100   PMID:23077300   PMID:23105109   PMID:23123544  
PMID:23320071   PMID:23357295   PMID:23369348   PMID:23379364   PMID:23382691   PMID:23428096   PMID:23448277   PMID:23480791   PMID:23505372   PMID:23536686   PMID:23548691   PMID:23601783  
PMID:23647667   PMID:23725790   PMID:23785198   PMID:23825473   PMID:23883001   PMID:24026671   PMID:24066097   PMID:24086139   PMID:24153115   PMID:24158810   PMID:24478420   PMID:24559861  
PMID:24600008   PMID:24613845   PMID:24662946   PMID:24881765   PMID:25127057   PMID:25195168   PMID:25203322   PMID:25412268   PMID:25731773   PMID:25880753   PMID:25924204   PMID:26076730  
PMID:26101372   PMID:26212332   PMID:26398573   PMID:26496610   PMID:26618866   PMID:26673895   PMID:26748714   PMID:26764007   PMID:27107820   PMID:27388872   PMID:27590274   PMID:27693506  
PMID:27919079   PMID:28420387   PMID:28514442   PMID:28536267   PMID:29282802   PMID:29373607   PMID:29991678   PMID:30282803   PMID:30419009   PMID:30442662   PMID:30503508   PMID:30889178  
PMID:31189110   PMID:31586073   PMID:31636416   PMID:31807695   PMID:31825835   PMID:32187548   PMID:32282853   PMID:32296183   PMID:32436883   PMID:32597089   PMID:32631377   PMID:32930662  
PMID:33009785   PMID:33154161   PMID:33441289  


Genomics

Comparative Map Data
TRIM5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl115,663,195 - 5,938,619 (-)EnsemblGRCh38hg38GRCh38
GRCh38115,590,906 - 5,685,108 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37115,684,425 - 5,706,304 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36115,641,364 - 5,662,869 (-)NCBINCBI36hg18NCBI36
Build 34115,641,368 - 5,662,869NCBI
Celera115,803,483 - 5,825,436 (-)NCBI
Cytogenetic Map11p15.4NCBI
HuRef115,344,050 - 5,365,972 (-)NCBIHuRef
CHM1_1115,683,377 - 5,705,274 (-)NCBICHM1_1
Trim5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397103,912,593 - 103,937,448 (-)NCBIGRCm39mm39
GRCm39 Ensembl7103,912,593 - 103,937,301 (-)Ensembl
GRCm387104,263,386 - 104,288,254 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7104,263,386 - 104,288,094 (-)EnsemblGRCm38mm10GRCm38
MGSCv377111,413,000 - 111,436,646 (-)NCBIGRCm37mm9NCBIm37
MGSCv367104,137,205 - 104,162,054 (-)NCBImm8
Celera7104,635,824 - 104,653,489 (-)NCBICelera
Cytogenetic Map7E3NCBI
Trim5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21158,720,407 - 158,737,393 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl1169,446,805 - 169,534,896 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01169,446,774 - 169,463,760 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01175,586,814 - 175,603,800 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41162,096,439 - 162,113,409 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11162,190,323 - 162,207,293 (-)NCBI
Celera1156,710,957 - 156,727,926 (-)NCBICelera
Cytogenetic Map1q32NCBI
TRIM5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1115,479,033 - 5,754,014 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl115,479,033 - 5,500,758 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0115,798,336 - 5,819,876 (-)NCBIMhudiblu_PPA_v0panPan3
LOC733579
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl94,157,290 - 4,170,204 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.194,157,290 - 4,170,233 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.294,724,246 - 4,737,190 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TRIM5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1161,040,908 - 61,067,815 (+)NCBI
ChlSab1.1 Ensembl161,040,928 - 61,069,356 (+)Ensembl
Vero_WHO_p1.0NW_02366604364,938,737 - 64,966,441 (-)NCBI

Position Markers
RH80365  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,685,605 - 5,685,820UniSTSGRCh37
Build 36115,642,181 - 5,642,396RGDNCBI36
Celera115,804,664 - 5,804,879RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,239 - 5,345,454UniSTS
GeneMap99-GB4 RH Map1136.82UniSTS
SHGC-82206  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,686,757 - 5,687,031UniSTSGRCh37
Build 36115,643,333 - 5,643,607RGDNCBI36
Celera115,805,816 - 5,806,090RGD
Cytogenetic Map11p15UniSTS
HuRef115,346,391 - 5,346,665UniSTS
TNG Radiation Hybrid Map112418.0UniSTS
ECD00812  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,700,005 - 5,700,894UniSTSGRCh37
Build 36115,656,581 - 5,657,470RGDNCBI36
Celera115,819,102 - 5,819,991RGD
Cytogenetic Map11p15UniSTS
HuRef115,359,637 - 5,360,526UniSTS
ECD01668  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,700,942 - 5,701,799UniSTSGRCh37
Build 36115,657,518 - 5,658,375RGDNCBI36
Celera115,820,039 - 5,820,896RGD
Cytogenetic Map11p15UniSTS
HuRef115,360,574 - 5,361,431UniSTS
ECD02008  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,699,123 - 5,699,968UniSTSGRCh37
Build 36115,655,699 - 5,656,544RGDNCBI36
Celera115,818,220 - 5,819,065RGD
Cytogenetic Map11p15UniSTS
HuRef115,358,755 - 5,359,600UniSTS
ECD02488  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,685,611 - 5,686,439UniSTSGRCh37
Build 36115,642,187 - 5,643,015RGDNCBI36
Celera115,804,670 - 5,805,498RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,245 - 5,346,073UniSTS
ECD03497  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,686,522 - 5,687,315UniSTSGRCh37
Build 36115,643,098 - 5,643,891RGDNCBI36
Celera115,805,581 - 5,806,374RGD
Cytogenetic Map11p15UniSTS
HuRef115,346,156 - 5,346,949UniSTS
ECD06463  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,687,682 - 5,688,390UniSTSGRCh37
Build 36115,644,258 - 5,644,966RGDNCBI36
Celera115,806,741 - 5,807,449RGD
Cytogenetic Map11p15UniSTS
HuRef115,347,315 - 5,348,023UniSTS
ECD11028  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,707,156 - 5,707,740UniSTSGRCh37
Build 36115,663,732 - 5,664,316RGDNCBI36
Celera115,826,257 - 5,826,841RGD
Cytogenetic Map11p15UniSTS
HuRef115,366,792 - 5,367,376UniSTS
ECD12489  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,706,256 - 5,706,798UniSTSGRCh37
Build 36115,662,832 - 5,663,374RGDNCBI36
Celera115,825,353 - 5,825,895RGD
Cytogenetic Map11p15UniSTS
HuRef115,365,889 - 5,366,431UniSTS
ECD13261  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,705,681 - 5,706,203UniSTSGRCh37
Build 36115,662,257 - 5,662,779RGDNCBI36
Celera115,824,778 - 5,825,300RGD
Cytogenetic Map11p15UniSTS
HuRef115,365,314 - 5,365,836UniSTS
ECD14730  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,688,762 - 5,689,249UniSTSGRCh37
Build 36115,645,338 - 5,645,825RGDNCBI36
Celera115,807,821 - 5,808,308RGD
Cytogenetic Map11p15UniSTS
HuRef115,348,392 - 5,348,879UniSTS
ECD16307  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,691,720 - 5,692,166UniSTSGRCh37
Build 36115,648,296 - 5,648,742RGDNCBI36
Celera115,810,819 - 5,811,265RGD
Cytogenetic Map11p15UniSTS
HuRef115,351,352 - 5,351,798UniSTS
ECD16490  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,701,968 - 5,702,406UniSTSGRCh37
Build 36115,658,544 - 5,658,982RGDNCBI36
Celera115,821,065 - 5,821,503RGD
Cytogenetic Map11p15UniSTS
HuRef115,361,600 - 5,362,038UniSTS
ECD19427  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,689,982 - 5,690,304UniSTSGRCh37
Build 36115,646,558 - 5,646,880RGDNCBI36
Celera115,809,041 - 5,809,363RGD
Cytogenetic Map11p15UniSTS
HuRef115,349,612 - 5,349,934UniSTS
REN99120  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,025 - 5,684,286UniSTSGRCh37
Build 36115,640,601 - 5,640,862RGDNCBI36
Celera115,803,095 - 5,803,356RGD
Cytogenetic Map11p15UniSTS
HuRef115,343,662 - 5,343,923UniSTS
REN99121  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,266 - 5,684,540UniSTSGRCh37
Build 36115,640,842 - 5,641,116RGDNCBI36
Celera115,803,336 - 5,803,598RGD
Cytogenetic Map11p15UniSTS
HuRef115,343,903 - 5,344,165UniSTS
REN99122  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,503 - 5,684,728UniSTSGRCh37
Build 36115,641,079 - 5,641,304RGDNCBI36
Celera115,803,561 - 5,803,786RGD
Cytogenetic Map11p15UniSTS
HuRef115,344,128 - 5,344,353UniSTS
REN99123  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,702 - 5,684,952UniSTSGRCh37
Build 36115,641,278 - 5,641,528RGDNCBI36
Celera115,803,760 - 5,804,010RGD
Cytogenetic Map11p15UniSTS
HuRef115,344,327 - 5,344,577UniSTS
REN99124  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,929 - 5,685,156UniSTSGRCh37
Build 36115,641,505 - 5,641,732RGDNCBI36
Celera115,803,987 - 5,804,214RGD
Cytogenetic Map11p15UniSTS
HuRef115,344,554 - 5,344,781UniSTS
REN99125  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,982 - 5,685,244UniSTSGRCh37
Build 36115,641,558 - 5,641,820RGDNCBI36
Celera115,804,040 - 5,804,302RGD
Cytogenetic Map11p15UniSTS
HuRef115,344,607 - 5,344,869UniSTS
REN99126  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,685,222 - 5,685,482UniSTSGRCh37
Build 36115,641,798 - 5,642,058RGDNCBI36
Celera115,804,280 - 5,804,541RGD
Cytogenetic Map11p15UniSTS
HuRef115,344,847 - 5,345,116UniSTS
REN99127  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,685,459 - 5,685,696UniSTSGRCh37
Build 36115,642,035 - 5,642,272RGDNCBI36
Celera115,804,518 - 5,804,755RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,093 - 5,345,330UniSTS
REN99128  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,685,656 - 5,685,927UniSTSGRCh37
Build 36115,642,232 - 5,642,503RGDNCBI36
Celera115,804,715 - 5,804,986RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,290 - 5,345,561UniSTS
REN99129  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,685,899 - 5,686,160UniSTSGRCh37
Build 36115,642,475 - 5,642,736RGDNCBI36
Celera115,804,958 - 5,805,219RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,533 - 5,345,794UniSTS
REN99130  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,686,121 - 5,686,347UniSTSGRCh37
Build 36115,642,697 - 5,642,923RGDNCBI36
Celera115,805,180 - 5,805,406RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,755 - 5,345,981UniSTS
REN99131  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,686,319 - 5,686,561UniSTSGRCh37
Build 36115,642,895 - 5,643,137RGDNCBI36
Celera115,805,378 - 5,805,620RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,953 - 5,346,195UniSTS
REN99132  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,686,550 - 5,686,780UniSTSGRCh37
Build 36115,643,126 - 5,643,356RGDNCBI36
Celera115,805,609 - 5,805,839RGD
Cytogenetic Map11p15UniSTS
HuRef115,346,184 - 5,346,414UniSTS
REN99133  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,686,756 - 5,687,012UniSTSGRCh37
Build 36115,643,332 - 5,643,588RGDNCBI36
Celera115,805,815 - 5,806,071RGD
Cytogenetic Map11p15UniSTS
HuRef115,346,390 - 5,346,646UniSTS
REN99134  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,686,988 - 5,687,245UniSTSGRCh37
Build 36115,643,564 - 5,643,821RGDNCBI36
Celera115,806,047 - 5,806,304RGD
Cytogenetic Map11p15UniSTS
HuRef115,346,622 - 5,346,879UniSTS
REN99135  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,687,221 - 5,687,452UniSTSGRCh37
Build 36115,643,797 - 5,644,028RGDNCBI36
Celera115,806,280 - 5,806,511RGD
Cytogenetic Map11p15UniSTS
HuRef115,346,855 - 5,347,086UniSTS
REN99136  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,687,433 - 5,687,690UniSTSGRCh37
Build 36115,644,009 - 5,644,266RGDNCBI36
Celera115,806,492 - 5,806,749RGD
Cytogenetic Map11p15UniSTS
HuRef115,347,067 - 5,347,323UniSTS
REN99137  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,687,668 - 5,687,911UniSTSGRCh37
Build 36115,644,244 - 5,644,487RGDNCBI36
Celera115,806,727 - 5,806,970RGD
Cytogenetic Map11p15UniSTS
HuRef115,347,301 - 5,347,544UniSTS
REN99138  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,687,908 - 5,688,132UniSTSGRCh37
Build 36115,644,484 - 5,644,708RGDNCBI36
Celera115,806,967 - 5,807,191RGD
Cytogenetic Map11p15UniSTS
HuRef115,347,541 - 5,347,765UniSTS
REN99139  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,688,122 - 5,688,365UniSTSGRCh37
Build 36115,644,698 - 5,644,941RGDNCBI36
Celera115,807,181 - 5,807,424RGD
Cytogenetic Map11p15UniSTS
HuRef115,347,755 - 5,347,998UniSTS
REN99140  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,688,193 - 5,688,420UniSTSGRCh37
Build 36115,644,769 - 5,644,996RGDNCBI36
Celera115,807,252 - 5,807,479RGD
Cytogenetic Map11p15UniSTS
HuRef115,347,826 - 5,348,053UniSTS
REN99141  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,688,653 - 5,688,877UniSTSGRCh37
Build 36115,645,229 - 5,645,453RGDNCBI36
Celera115,807,712 - 5,807,936RGD
Cytogenetic Map11p15UniSTS
HuRef115,348,283 - 5,348,507UniSTS
REN99142  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,688,869 - 5,689,113UniSTSGRCh37
Build 36115,645,445 - 5,645,689RGDNCBI36
Celera115,807,928 - 5,808,172RGD
Cytogenetic Map11p15UniSTS
HuRef115,348,499 - 5,348,743UniSTS
REN99143  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,689,098 - 5,689,336UniSTSGRCh37
Build 36115,645,674 - 5,645,912RGDNCBI36
Celera115,808,157 - 5,808,395RGD
Cytogenetic Map11p15UniSTS
HuRef115,348,728 - 5,348,966UniSTS
REN99144  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,689,310 - 5,689,579UniSTSGRCh37
Build 36115,645,886 - 5,646,155RGDNCBI36
Celera115,808,369 - 5,808,638RGD
Cytogenetic Map11p15UniSTS
HuRef115,348,940 - 5,349,209UniSTS
REN99145  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,689,576 - 5,689,848UniSTSGRCh37
Build 36115,646,152 - 5,646,424RGDNCBI36
Celera115,808,635 - 5,808,907RGD
Cytogenetic Map11p15UniSTS
HuRef115,349,206 - 5,349,478UniSTS
REN99146  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,689,817 - 5,690,086UniSTSGRCh37
Build 36115,646,393 - 5,646,662RGDNCBI36
Celera115,808,876 - 5,809,145RGD
Cytogenetic Map11p15UniSTS
HuRef115,349,447 - 5,349,716UniSTS
REN99147  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,690,063 - 5,690,314UniSTSGRCh37
Build 36115,646,639 - 5,646,890RGDNCBI36
Celera115,809,122 - 5,809,373RGD
Cytogenetic Map11p15UniSTS
HuRef115,349,693 - 5,349,944UniSTS
REN99148  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,690,129 - 5,690,354UniSTSGRCh37
Build 36115,646,705 - 5,646,930RGDNCBI36
Celera115,809,188 - 5,809,416RGD
Cytogenetic Map11p15UniSTS
HuRef115,349,759 - 5,349,984UniSTS
REN99149  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,690,599 - 5,690,864UniSTSGRCh37
Build 36115,647,175 - 5,647,440RGDNCBI36
Cytogenetic Map11p15UniSTS
HuRef115,350,229 - 5,350,494UniSTS
REN99150  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,690,837 - 5,691,082UniSTSGRCh37
Build 36115,647,413 - 5,647,658RGDNCBI36
Celera115,809,935 - 5,810,180RGD
Cytogenetic Map11p15UniSTS
HuRef115,350,467 - 5,350,712UniSTS
REN99151  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,691,048 - 5,691,320UniSTSGRCh37
Build 36115,647,624 - 5,647,896RGDNCBI36
Celera115,810,146 - 5,810,418RGD
Cytogenetic Map11p15UniSTS
HuRef115,350,678 - 5,350,950UniSTS
REN99152  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,691,141 - 5,691,394UniSTSGRCh37
Build 36115,647,717 - 5,647,970RGDNCBI36
Celera115,810,239 - 5,810,492RGD
Cytogenetic Map11p15UniSTS
HuRef115,350,771 - 5,351,024UniSTS
REN99153  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,691,699 - 5,691,930UniSTSGRCh37
Build 36115,648,275 - 5,648,506RGDNCBI36
Celera115,810,798 - 5,811,029RGD
Cytogenetic Map11p15UniSTS
HuRef115,351,331 - 5,351,562UniSTS
REN99154  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,691,925 - 5,692,168UniSTSGRCh37
Build 36115,648,501 - 5,648,744RGDNCBI36
Celera115,811,024 - 5,811,267RGD
Cytogenetic Map11p15UniSTS
HuRef115,351,557 - 5,351,800UniSTS
REN99155  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,692,149 - 5,692,402UniSTSGRCh37
Build 36115,648,725 - 5,648,978RGDNCBI36
Celera115,811,248 - 5,811,501RGD
Cytogenetic Map11p15UniSTS
HuRef115,351,781 - 5,352,034UniSTS
REN99156  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,692,367 - 5,692,595UniSTSGRCh37
Build 36115,648,943 - 5,649,171RGDNCBI36
Celera115,811,466 - 5,811,695RGD
Cytogenetic Map11p15UniSTS
HuRef115,351,999 - 5,352,228UniSTS
REN99157  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,692,593 - 5,692,845UniSTSGRCh37
Build 36115,649,169 - 5,649,421RGDNCBI36
Celera115,811,693 - 5,811,945RGD
Cytogenetic Map11p15UniSTS
HuRef115,352,226 - 5,352,478UniSTS
REN99158  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,692,782 - 5,693,027UniSTSGRCh37
Build 36115,649,358 - 5,649,603RGDNCBI36
Celera115,811,882 - 5,812,127RGD
Cytogenetic Map11p15UniSTS
HuRef115,352,415 - 5,352,660UniSTS
REN99159  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,692,955 - 5,693,180UniSTSGRCh37
Build 36115,649,531 - 5,649,756RGDNCBI36
Celera115,812,055 - 5,812,281RGD
Cytogenetic Map11p15UniSTS
HuRef115,352,588 - 5,352,814UniSTS
REN99160  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,693,168 - 5,693,417UniSTSGRCh37
Build 36115,649,744 - 5,649,993RGDNCBI36
Celera115,812,269 - 5,812,518RGD
Cytogenetic Map11p15UniSTS
HuRef115,352,802 - 5,353,051UniSTS
REN99161  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,693,318 - 5,693,585UniSTSGRCh37
Build 36115,649,894 - 5,650,161RGDNCBI36
Celera115,812,419 - 5,812,686RGD
Cytogenetic Map11p15UniSTS
HuRef115,352,952 - 5,353,219UniSTS
REN99162  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,693,552 - 5,693,820UniSTSGRCh37
Build 36115,650,128 - 5,650,396RGDNCBI36
Celera115,812,653 - 5,812,921RGD
Cytogenetic Map11p15UniSTS
HuRef115,353,186 - 5,353,454UniSTS
REN99163  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,693,802 - 5,694,049UniSTSGRCh37
Build 36115,650,378 - 5,650,625RGDNCBI36
Celera115,812,903 - 5,813,150RGD
Cytogenetic Map11p15UniSTS
HuRef115,353,436 - 5,353,683UniSTS
REN99164  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,694,036 - 5,694,285UniSTSGRCh37
Build 36115,650,612 - 5,650,861RGDNCBI36
Celera115,813,137 - 5,813,386RGD
Cytogenetic Map11p15UniSTS
HuRef115,353,670 - 5,353,919UniSTS
REN99165  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,694,227 - 5,694,495UniSTSGRCh37
Build 36115,650,803 - 5,651,071RGDNCBI36
Celera115,813,328 - 5,813,596RGD
Cytogenetic Map11p15UniSTS
HuRef115,353,861 - 5,354,129UniSTS
REN99166  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,694,474 - 5,694,723UniSTSGRCh37
Build 36115,651,050 - 5,651,299RGDNCBI36
Celera115,813,575 - 5,813,824RGD
Cytogenetic Map11p15UniSTS
HuRef115,354,108 - 5,354,357UniSTS
REN99167  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,694,709 - 5,694,978UniSTSGRCh37
Build 36115,651,285 - 5,651,554RGDNCBI36
Celera115,813,810 - 5,814,079RGD
Cytogenetic Map11p15UniSTS
HuRef115,354,343 - 5,354,612UniSTS
REN99168  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,694,950 - 5,695,203UniSTSGRCh37
Build 36115,651,526 - 5,651,779RGDNCBI36
Celera115,814,051 - 5,814,304RGD
Cytogenetic Map11p15UniSTS
HuRef115,354,584 - 5,354,837UniSTS
REN99169  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,695,178 - 5,695,437UniSTSGRCh37
Build 36115,651,754 - 5,652,013RGDNCBI36
Celera115,814,279 - 5,814,538RGD
Cytogenetic Map11p15UniSTS
HuRef115,354,812 - 5,355,071UniSTS
REN99170  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,695,377 - 5,695,644UniSTSGRCh37
Build 36115,651,953 - 5,652,220RGDNCBI36
Celera115,814,478 - 5,814,745RGD
Cytogenetic Map11p15UniSTS
HuRef115,355,011 - 5,355,278UniSTS
REN99171  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,695,629 - 5,695,857UniSTSGRCh37
Build 36115,652,205 - 5,652,433RGDNCBI36
Celera115,814,730 - 5,814,958RGD
Cytogenetic Map11p15UniSTS
HuRef115,355,263 - 5,355,491UniSTS
REN99172  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,695,818 - 5,696,042UniSTSGRCh37
Build 36115,652,394 - 5,652,618RGDNCBI36
Celera115,814,919 - 5,815,143RGD
Cytogenetic Map11p15UniSTS
HuRef115,355,452 - 5,355,676UniSTS
REN99173  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,696,016 - 5,696,261UniSTSGRCh37
Build 36115,652,592 - 5,652,837RGDNCBI36
Celera115,815,117 - 5,815,362RGD
Cytogenetic Map11p15UniSTS
HuRef115,355,650 - 5,355,895UniSTS
REN99174  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,696,237 - 5,696,469UniSTSGRCh37
Build 36115,652,813 - 5,653,045RGDNCBI36
Celera115,815,338 - 5,815,570RGD
Cytogenetic Map11p15UniSTS
HuRef115,355,871 - 5,356,103UniSTS
REN99175  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,696,447 - 5,696,711UniSTSGRCh37
Build 36115,653,023 - 5,653,287RGDNCBI36
Celera115,815,548 - 5,815,812RGD
Cytogenetic Map11p15UniSTS
HuRef115,356,081 - 5,356,345UniSTS
REN99176  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,696,672 - 5,696,896UniSTSGRCh37
GRCh37137,134,052 - 37,134,276UniSTSGRCh37
Build 36136,906,639 - 36,906,863RGDNCBI36
Celera135,409,728 - 35,409,952RGD
Celera115,815,773 - 5,815,996UniSTS
Cytogenetic Map11p15UniSTS
HuRef135,250,500 - 35,250,724UniSTS
HuRef115,356,306 - 5,356,530UniSTS
REN99177  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,698,851 - 5,699,110UniSTSGRCh37
Build 36115,655,427 - 5,655,686RGDNCBI36
Celera115,817,948 - 5,818,207RGD
Cytogenetic Map11p15UniSTS
HuRef115,358,483 - 5,358,742UniSTS
REN99178  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,699,091 - 5,699,331UniSTSGRCh37
Build 36115,655,667 - 5,655,907RGDNCBI36
Celera115,818,188 - 5,818,428RGD
Cytogenetic Map11p15UniSTS
HuRef115,358,723 - 5,358,963UniSTS
REN99179  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,699,325 - 5,699,568UniSTSGRCh37
Build 36115,655,901 - 5,656,144RGDNCBI36
Celera115,818,422 - 5,818,665RGD
Cytogenetic Map11p15UniSTS
HuRef115,358,957 - 5,359,200UniSTS
REN99180  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,699,523 - 5,699,772UniSTSGRCh37
Build 36115,656,099 - 5,656,348RGDNCBI36
Celera115,818,620 - 5,818,869RGD
Cytogenetic Map11p15UniSTS
HuRef115,359,155 - 5,359,404UniSTS
REN99181  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,699,760 - 5,700,007UniSTSGRCh37
Build 36115,656,336 - 5,656,583RGDNCBI36
Celera115,818,857 - 5,819,104RGD
Cytogenetic Map11p15UniSTS
HuRef115,359,392 - 5,359,639UniSTS
REN99182  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,699,984 - 5,700,226UniSTSGRCh37
Build 36115,656,560 - 5,656,802RGDNCBI36
Celera115,819,081 - 5,819,323RGD
Cytogenetic Map11p15UniSTS
HuRef115,359,616 - 5,359,858UniSTS
REN99183  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,700,205 - 5,700,446UniSTSGRCh37
Build 36115,656,781 - 5,657,022RGDNCBI36
Celera115,819,302 - 5,819,543RGD
Cytogenetic Map11p15UniSTS
HuRef115,359,837 - 5,360,078UniSTS
REN99184  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,700,428 - 5,700,667UniSTSGRCh37
Build 36115,657,004 - 5,657,243RGDNCBI36
Celera115,819,525 - 5,819,764RGD
Cytogenetic Map11p15UniSTS
HuRef115,360,060 - 5,360,299UniSTS
REN99185  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,700,643 - 5,700,899UniSTSGRCh37
Build 36115,657,219 - 5,657,475RGDNCBI36
Celera115,819,740 - 5,819,996RGD
Cytogenetic Map11p15UniSTS
HuRef115,360,275 - 5,360,531UniSTS
REN99186  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,700,891 - 5,701,147UniSTSGRCh37
Build 36115,657,467 - 5,657,723RGDNCBI36
Celera115,819,988 - 5,820,244RGD
Cytogenetic Map11p15UniSTS
HuRef115,360,523 - 5,360,779UniSTS
REN99187  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,701,125 - 5,701,355UniSTSGRCh37
Build 36115,657,701 - 5,657,931RGDNCBI36
Celera115,820,222 - 5,820,452RGD
Cytogenetic Map11p15UniSTS
HuRef115,360,757 - 5,360,987UniSTS
REN99188  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,701,328 - 5,701,560UniSTSGRCh37
Build 36115,657,904 - 5,658,136RGDNCBI36
Celera115,820,425 - 5,820,657RGD
Cytogenetic Map11p15UniSTS
HuRef115,360,960 - 5,361,192UniSTS
REN99189  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,701,537 - 5,701,796UniSTSGRCh37
Build 36115,658,113 - 5,658,372RGDNCBI36
Celera115,820,634 - 5,820,893RGD
Cytogenetic Map11p15UniSTS
HuRef115,361,169 - 5,361,428UniSTS
REN99190  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,701,773 - 5,702,012UniSTSGRCh37
Build 36115,658,349 - 5,658,588RGDNCBI36
Celera115,820,870 - 5,821,109RGD
Cytogenetic Map11p15UniSTS
HuRef115,361,405 - 5,361,644UniSTS
REN99191  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,701,979 - 5,702,224UniSTSGRCh37
Build 36115,658,555 - 5,658,800RGDNCBI36
Celera115,821,076 - 5,821,321RGD
Cytogenetic Map11p15UniSTS
HuRef115,361,611 - 5,361,856UniSTS
REN99192  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,702,192 - 5,702,417UniSTSGRCh37
Build 36115,658,768 - 5,658,993RGDNCBI36
Celera115,821,289 - 5,821,514RGD
Cytogenetic Map11p15UniSTS
HuRef115,361,824 - 5,362,049UniSTS
REN99193  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,702,355 - 5,702,580UniSTSGRCh37
Build 36115,658,931 - 5,659,156RGDNCBI36
Celera115,821,452 - 5,821,677RGD
Cytogenetic Map11p15UniSTS
HuRef115,361,987 - 5,362,212UniSTS
REN99194  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,702,558 - 5,702,815UniSTSGRCh37
Build 36115,659,134 - 5,659,391RGDNCBI36
Celera115,821,655 - 5,821,912RGD
Cytogenetic Map11p15UniSTS
HuRef115,362,190 - 5,362,447UniSTS
REN99195  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,702,714 - 5,702,980UniSTSGRCh37
Build 36115,659,290 - 5,659,556RGDNCBI36
Celera115,821,811 - 5,822,077RGD
Cytogenetic Map11p15UniSTS
HuRef115,362,346 - 5,362,612UniSTS
REN99196  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,702,901 - 5,703,142UniSTSGRCh37
Build 36115,659,477 - 5,659,718RGDNCBI36
Celera115,821,998 - 5,822,239RGD
Cytogenetic Map11p15UniSTS
HuRef115,362,533 - 5,362,774UniSTS
REN99197  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,703,120 - 5,703,364UniSTSGRCh37
Build 36115,659,696 - 5,659,940RGDNCBI36
Celera115,822,217 - 5,822,461RGD
Cytogenetic Map11p15UniSTS
HuRef115,362,752 - 5,362,996UniSTS
REN99198  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,703,334 - 5,703,584UniSTSGRCh37
Build 36115,659,910 - 5,660,160RGDNCBI36
Celera115,822,431 - 5,822,680RGD
Cytogenetic Map11p15UniSTS
HuRef115,362,966 - 5,363,216UniSTS
REN99199  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,703,561 - 5,703,799UniSTSGRCh37
Build 36115,660,137 - 5,660,375RGDNCBI36
Celera115,822,657 - 5,822,895RGD
Cytogenetic Map11p15UniSTS
HuRef115,363,193 - 5,363,431UniSTS
REN99200  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,703,789 - 5,704,036UniSTSGRCh37
Build 36115,660,365 - 5,660,612RGDNCBI36
Celera115,822,885 - 5,823,132RGD
Cytogenetic Map11p15UniSTS
HuRef115,363,421 - 5,363,668UniSTS
REN99201  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,704,931 - 5,705,155UniSTSGRCh37
Build 36115,661,507 - 5,661,731RGDNCBI36
Celera115,824,027 - 5,824,251RGD
Cytogenetic Map11p15UniSTS
HuRef115,364,563 - 5,364,787UniSTS
REN99202  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,705,398 - 5,705,640UniSTSGRCh37
Build 36115,661,974 - 5,662,216RGDNCBI36
Celera115,824,494 - 5,824,736RGD
Cytogenetic Map11p15UniSTS
HuRef115,365,030 - 5,365,272UniSTS
REN99203  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,705,633 - 5,705,876UniSTSGRCh37
Build 36115,662,209 - 5,662,452RGDNCBI36
Cytogenetic Map11p15UniSTS
REN99204  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,705,856 - 5,706,130UniSTSGRCh37
Build 36115,662,432 - 5,662,706RGDNCBI36
Celera115,824,953 - 5,825,227RGD
Cytogenetic Map11p15UniSTS
HuRef115,365,489 - 5,365,763UniSTS
REN99205  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,706,108 - 5,706,351UniSTSGRCh37
Build 36115,662,684 - 5,662,927RGDNCBI36
Celera115,825,205 - 5,825,448RGD
Cytogenetic Map11p15UniSTS
HuRef115,365,741 - 5,365,984UniSTS
REN99206  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,706,345 - 5,706,595UniSTSGRCh37
Build 36115,662,921 - 5,663,171RGDNCBI36
Celera115,825,442 - 5,825,692RGD
Cytogenetic Map11p15UniSTS
HuRef115,365,978 - 5,366,228UniSTS
REN99207  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,706,571 - 5,706,823UniSTSGRCh37
Build 36115,663,147 - 5,663,399RGDNCBI36
Celera115,825,668 - 5,825,920RGD
Cytogenetic Map11p15UniSTS
HuRef115,366,204 - 5,366,456UniSTS
REN99208  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,706,602 - 5,706,826UniSTSGRCh37
Build 36115,663,178 - 5,663,402RGDNCBI36
Celera115,825,699 - 5,825,923RGD
Cytogenetic Map11p15UniSTS
HuRef115,366,235 - 5,366,459UniSTS
REN99209  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,707,156 - 5,707,380UniSTSGRCh37
Build 36115,663,732 - 5,663,956RGDNCBI36
Celera115,826,257 - 5,826,481RGD
Cytogenetic Map11p15UniSTS
HuRef115,366,792 - 5,367,016UniSTS
REN99210  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,707,350 - 5,707,602UniSTSGRCh37
Build 36115,663,926 - 5,664,178RGDNCBI36
Celera115,826,451 - 5,826,703RGD
Cytogenetic Map11p15UniSTS
HuRef115,366,986 - 5,367,238UniSTS
REN99211  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,707,542 - 5,707,792UniSTSGRCh37
Build 36115,664,118 - 5,664,368RGDNCBI36
Celera115,826,643 - 5,826,893RGD
Cytogenetic Map11p15UniSTS
HuRef115,367,178 - 5,367,428UniSTS
REN99212  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,707,719 - 5,707,945UniSTSGRCh37
Build 36115,664,295 - 5,664,521RGDNCBI36
Celera115,826,820 - 5,827,046RGD
Cytogenetic Map11p15UniSTS
HuRef115,367,355 - 5,367,581UniSTS
stSG611139  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,397 - 5,684,639UniSTSGRCh37
Build 36115,640,973 - 5,641,215RGDNCBI36
Celera115,803,455 - 5,803,697RGD
HuRef115,344,022 - 5,344,264UniSTS
stSG611140  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,685 - 5,685,744UniSTSGRCh37
Build 36115,641,261 - 5,642,320RGDNCBI36
Celera115,803,743 - 5,804,803RGD
Cytogenetic Map11p15UniSTS
HuRef115,344,310 - 5,345,378UniSTS
stSG611141  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,685,725 - 5,686,910UniSTSGRCh37
Build 36115,642,301 - 5,643,486RGDNCBI36
Celera115,804,784 - 5,805,969RGD
Cytogenetic Map11p15UniSTS
HuRef115,345,359 - 5,346,544UniSTS
stSG611142  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,687,078 - 5,688,342UniSTSGRCh37
Build 36115,643,654 - 5,644,918RGDNCBI36
Celera115,806,137 - 5,807,401RGD
HuRef115,346,712 - 5,347,975UniSTS
stSG611143  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,688,328 - 5,689,629UniSTSGRCh37
Build 36115,644,904 - 5,646,205RGDNCBI36
Celera115,807,387 - 5,808,688RGD
HuRef115,347,961 - 5,349,259UniSTS
stSG611144  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,689,629 - 5,690,734UniSTSGRCh37
Build 36115,646,205 - 5,647,310RGDNCBI36
Celera115,808,688 - 5,809,832RGD
HuRef115,349,259 - 5,350,364UniSTS
stSG611145  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,690,715 - 5,691,739UniSTSGRCh37
Build 36115,647,291 - 5,648,315RGDNCBI36
Celera115,809,813 - 5,810,838RGD
HuRef115,350,345 - 5,351,371UniSTS
stSG611146  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,691,720 - 5,691,946UniSTSGRCh37
Build 36115,648,296 - 5,648,522RGDNCBI36
Celera115,810,819 - 5,811,045RGD
HuRef115,351,352 - 5,351,578UniSTS
stSG611147  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,691,926 - 5,692,167UniSTSGRCh37
Build 36115,648,502 - 5,648,743RGDNCBI36
Celera115,811,025 - 5,811,266RGD
HuRef115,351,558 - 5,351,799UniSTS
stSG611148  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,695,444 - 5,696,601UniSTSGRCh37
Build 36115,652,020 - 5,653,177RGDNCBI36
Celera115,814,545 - 5,815,702RGD
HuRef115,355,078 - 5,356,235UniSTS
stSG611150  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,700,081 - 5,701,349UniSTSGRCh37
Build 36115,656,657 - 5,657,925RGDNCBI36
Celera115,819,178 - 5,820,446RGD
Cytogenetic Map11p15UniSTS
HuRef115,359,713 - 5,360,981UniSTS
stSG611151  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,701,330 - 5,702,406UniSTSGRCh37
Build 36115,657,906 - 5,658,982RGDNCBI36
Celera115,820,427 - 5,821,503RGD
HuRef115,360,962 - 5,362,038UniSTS
stSG611152  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,702,387 - 5,703,667UniSTSGRCh37
Build 36115,658,963 - 5,660,243RGDNCBI36
Celera115,821,484 - 5,822,763RGD
HuRef115,362,019 - 5,363,299UniSTS
stSG611153  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,705,681 - 5,706,747UniSTSGRCh37
Build 36115,662,257 - 5,663,323RGDNCBI36
Celera115,824,778 - 5,825,844RGD
HuRef115,365,314 - 5,366,380UniSTS
stSG611154  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,706,585 - 5,707,589UniSTSGRCh37
Build 36115,663,161 - 5,664,165RGDNCBI36
Celera115,825,682 - 5,826,690RGD
HuRef115,366,218 - 5,367,225UniSTS
SHGC-32233  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,684,803 - 5,684,952UniSTSGRCh37
Build 36115,641,379 - 5,641,528RGDNCBI36
Celera115,803,861 - 5,804,010RGD
Cytogenetic Map11p15UniSTS
HuRef115,344,428 - 5,344,577UniSTS
Stanford-G3 RH Map11172.0UniSTS
Whitehead-RH Map1147.3UniSTS
NCBI RH Map1117.2UniSTS
GeneMap99-G3 RH Map11172.0UniSTS
RH67864  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37115,687,074 - 5,687,302UniSTSGRCh37
Build 36115,643,650 - 5,643,878RGDNCBI36
Celera115,806,133 - 5,806,361RGD
Cytogenetic Map11p15UniSTS
HuRef115,346,708 - 5,346,936UniSTS
GeneMap99-GB4 RH Map1136.62UniSTS
D11S3114  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map15q11.2-q21.3UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map10q11.1UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map11q14.2UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map20q11.21UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map8p11.2UniSTS
Cytogenetic Map7q21.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map1p35-p34.3UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map12p12.2-p11.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map10q11.1-q24UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic MapXq21.1UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map7q31.1-q31.3UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic MapXq13.1-q21.1UniSTS
Cytogenetic Map20pter-q12UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic Map1q41-q42.2UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map9p23UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map5q11.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic MapXq21UniSTS
Cytogenetic Map6p12UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic Map19qUniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map22q12.3-q13.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map2q34UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map9q34.1UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map9p22.3UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map4p12UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map19q11UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map12q13.11UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map1p32.2-p32.1UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map4q13.2UniSTS
Cytogenetic Map4q31.23UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map14q24.2UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4374
Count of miRNA genes:1040
Interacting mature miRNAs:1242
Transcripts:ENST00000305836, ENST00000380027, ENST00000380034, ENST00000396847, ENST00000396853, ENST00000396855, ENST00000412903, ENST00000419850, ENST00000433961, ENST00000438025, ENST00000465634, ENST00000483835, ENST00000487241, ENST00000492086
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 770 1274 1097 253 1114 195 1555 299 589 221 953 1450 66 522 989 4 2
Low 1669 1716 628 370 837 269 2780 1874 2989 198 505 132 109 1 682 1777 2
Below cutoff 1 1 1 1 22 24 155 2 22 22

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_029122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_033034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_033092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_033093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005253184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006718358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011520427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017018463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001748018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_930920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_930921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB362928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC015691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC109341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF220025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF220026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF220027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF220028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF220029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK074363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY625000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC021258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX647152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN334837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA475412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ288685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ301480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EU260465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ561496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF928461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JF928462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000380027   ⟹   ENSP00000369366
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,663,563 - 5,872,358 (-)Ensembl
RefSeq Acc Id: ENST00000380034   ⟹   ENSP00000369373
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,663,195 - 5,685,074 (-)Ensembl
RefSeq Acc Id: ENST00000396847   ⟹   ENSP00000380058
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,663,617 - 5,685,042 (-)Ensembl
RefSeq Acc Id: ENST00000412903   ⟹   ENSP00000388031
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,678,320 - 5,938,619 (-)Ensembl
RefSeq Acc Id: ENST00000419850   ⟹   ENSP00000388150
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,679,962 - 5,685,043 (-)Ensembl
RefSeq Acc Id: ENST00000433961   ⟹   ENSP00000393052
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,663,564 - 5,680,232 (-)Ensembl
RefSeq Acc Id: ENST00000438025   ⟹   ENSP00000398196
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,663,831 - 5,679,807 (-)Ensembl
RefSeq Acc Id: ENST00000465634
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,665,880 - 5,679,833 (-)Ensembl
RefSeq Acc Id: ENST00000483835
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,664,058 - 5,679,857 (-)Ensembl
RefSeq Acc Id: ENST00000487241
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,677,946 - 5,679,931 (-)Ensembl
RefSeq Acc Id: ENST00000492086
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,665,420 - 5,679,140 (-)Ensembl
RefSeq Acc Id: ENST00000682968   ⟹   ENSP00000506742
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,663,666 - 5,685,099 (-)Ensembl
RefSeq Acc Id: ENST00000684417
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,665,656 - 5,685,044 (-)Ensembl
RefSeq Acc Id: ENST00000684655   ⟹   ENSP00000507420
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl115,663,572 - 5,685,097 (-)Ensembl
RefSeq Acc Id: NM_033034   ⟹   NP_149023
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,195 - 5,685,074 (-)NCBI
GRCh37115,676,740 - 5,706,339 (-)NCBI
Build 36115,641,364 - 5,662,869 (-)NCBI Archive
HuRef115,344,050 - 5,365,972 (-)ENTREZGENE
CHM1_1115,683,377 - 5,705,274 (-)NCBI
Sequence:
RefSeq Acc Id: NM_033092   ⟹   NP_149083
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,074 (-)NCBI
GRCh37115,676,740 - 5,706,339 (-)NCBI
Build 36115,642,928 - 5,662,869 (-)NCBI Archive
HuRef115,344,050 - 5,365,972 (-)ENTREZGENE
CHM1_1115,683,377 - 5,705,274 (-)NCBI
Sequence:
RefSeq Acc Id: NM_033093   ⟹   NP_149084
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,074 (-)NCBI
GRCh37115,676,740 - 5,706,339 (-)NCBI
Build 36115,641,369 - 5,662,869 (-)NCBI Archive
HuRef115,344,050 - 5,365,972 (-)ENTREZGENE
CHM1_1115,683,377 - 5,705,274 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005253183   ⟹   XP_005253240
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,108 (-)NCBI
GRCh37115,676,740 - 5,706,339 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005253184   ⟹   XP_005253241
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,084 (-)NCBI
GRCh37115,676,740 - 5,706,339 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006718358   ⟹   XP_006718421
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011520426   ⟹   XP_011518728
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011520427   ⟹   XP_011518729
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,665,420 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017018460   ⟹   XP_016873949
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,667,718 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017018461   ⟹   XP_016873950
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,108 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017018462   ⟹   XP_016873951
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,645,442 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017018463   ⟹   XP_016873952
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,108 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001748014
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,590,966 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001748015
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,590,906 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001748016
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,108 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001748017
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,645,845 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001748018
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,590,908 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XR_930920
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,663,228 - 5,685,084 (-)NCBI
Sequence:
RefSeq Acc Id: XR_930921
RefSeq Status:
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,664,155 - 5,685,084 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_149023 (Get FASTA)   NCBI Sequence Viewer  
  NP_149083 (Get FASTA)   NCBI Sequence Viewer  
  NP_149084 (Get FASTA)   NCBI Sequence Viewer  
  XP_005253240 (Get FASTA)   NCBI Sequence Viewer  
  XP_005253241 (Get FASTA)   NCBI Sequence Viewer  
  XP_006718421 (Get FASTA)   NCBI Sequence Viewer  
  XP_011518728 (Get FASTA)   NCBI Sequence Viewer  
  XP_011518729 (Get FASTA)   NCBI Sequence Viewer  
  XP_016873949 (Get FASTA)   NCBI Sequence Viewer  
  XP_016873950 (Get FASTA)   NCBI Sequence Viewer  
  XP_016873951 (Get FASTA)   NCBI Sequence Viewer  
  XP_016873952 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG53479 (Get FASTA)   NCBI Sequence Viewer  
  AAG53480 (Get FASTA)   NCBI Sequence Viewer  
  AAG53481 (Get FASTA)   NCBI Sequence Viewer  
  AAG53482 (Get FASTA)   NCBI Sequence Viewer  
  AAG53483 (Get FASTA)   NCBI Sequence Viewer  
  AAH20770 (Get FASTA)   NCBI Sequence Viewer  
  AAH21258 (Get FASTA)   NCBI Sequence Viewer  
  AAT48101 (Get FASTA)   NCBI Sequence Viewer  
  ABB90543 (Get FASTA)   NCBI Sequence Viewer  
  ABC00997 (Get FASTA)   NCBI Sequence Viewer  
  ABC00998 (Get FASTA)   NCBI Sequence Viewer  
  ABC00999 (Get FASTA)   NCBI Sequence Viewer  
  ABC01000 (Get FASTA)   NCBI Sequence Viewer  
  ABC01001 (Get FASTA)   NCBI Sequence Viewer  
  ABC01002 (Get FASTA)   NCBI Sequence Viewer  
  ABC01003 (Get FASTA)   NCBI Sequence Viewer  
  ABC01004 (Get FASTA)   NCBI Sequence Viewer  
  ABC01005 (Get FASTA)   NCBI Sequence Viewer  
  ABC01006 (Get FASTA)   NCBI Sequence Viewer  
  ABC01007 (Get FASTA)   NCBI Sequence Viewer  
  ABC01008 (Get FASTA)   NCBI Sequence Viewer  
  ABC01009 (Get FASTA)   NCBI Sequence Viewer  
  ABC01010 (Get FASTA)   NCBI Sequence Viewer  
  ABC01011 (Get FASTA)   NCBI Sequence Viewer  
  ABC01012 (Get FASTA)   NCBI Sequence Viewer  
  ABC01013 (Get FASTA)   NCBI Sequence Viewer  
  ABC01014 (Get FASTA)   NCBI Sequence Viewer  
  ABC01015 (Get FASTA)   NCBI Sequence Viewer  
  ABC01016 (Get FASTA)   NCBI Sequence Viewer  
  ABC01017 (Get FASTA)   NCBI Sequence Viewer  
  ABC01018 (Get FASTA)   NCBI Sequence Viewer  
  ABC01019 (Get FASTA)   NCBI Sequence Viewer  
  ABC01020 (Get FASTA)   NCBI Sequence Viewer  
  ABC01021 (Get FASTA)   NCBI Sequence Viewer  
  ABC01022 (Get FASTA)   NCBI Sequence Viewer  
  ABC01023 (Get FASTA)   NCBI Sequence Viewer  
  ABC01024 (Get FASTA)   NCBI Sequence Viewer  
  ABC01025 (Get FASTA)   NCBI Sequence Viewer  
  ABC01026 (Get FASTA)   NCBI Sequence Viewer  
  ABC01027 (Get FASTA)   NCBI Sequence Viewer  
  ABC01028 (Get FASTA)   NCBI Sequence Viewer  
  ABC01029 (Get FASTA)   NCBI Sequence Viewer  
  ABC01030 (Get FASTA)   NCBI Sequence Viewer  
  ABC01031 (Get FASTA)   NCBI Sequence Viewer  
  ABC01032 (Get FASTA)   NCBI Sequence Viewer  
  ABC01033 (Get FASTA)   NCBI Sequence Viewer  
  ABW96352 (Get FASTA)   NCBI Sequence Viewer  
  ACY29365 (Get FASTA)   NCBI Sequence Viewer  
  ACY29366 (Get FASTA)   NCBI Sequence Viewer  
  ACY29367 (Get FASTA)   NCBI Sequence Viewer  
  ACY29368 (Get FASTA)   NCBI Sequence Viewer  
  ACY29369 (Get FASTA)   NCBI Sequence Viewer  
  ACY29370 (Get FASTA)   NCBI Sequence Viewer  
  ACY29371 (Get FASTA)   NCBI Sequence Viewer  
  ACY29372 (Get FASTA)   NCBI Sequence Viewer  
  ACY29373 (Get FASTA)   NCBI Sequence Viewer  
  ACY29374 (Get FASTA)   NCBI Sequence Viewer  
  AEN14475 (Get FASTA)   NCBI Sequence Viewer  
  AEN14476 (Get FASTA)   NCBI Sequence Viewer  
  BAB55218 (Get FASTA)   NCBI Sequence Viewer  
  BAG16811 (Get FASTA)   NCBI Sequence Viewer  
  EAW68771 (Get FASTA)   NCBI Sequence Viewer  
  EAW68772 (Get FASTA)   NCBI Sequence Viewer  
  EAW68773 (Get FASTA)   NCBI Sequence Viewer  
  EAW68774 (Get FASTA)   NCBI Sequence Viewer  
  EAW68775 (Get FASTA)   NCBI Sequence Viewer  
  EAW68776 (Get FASTA)   NCBI Sequence Viewer  
  EAW68777 (Get FASTA)   NCBI Sequence Viewer  
  Q9C035 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_149084   ⟸   NM_033093
- Peptide Label: isoform delta
- UniProtKB: Q9C035 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_149023   ⟸   NM_033034
- Peptide Label: isoform alpha
- UniProtKB: Q9C035 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_149083   ⟸   NM_033092
- Peptide Label: isoform gamma
- UniProtKB: Q9C035 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005253240   ⟸   XM_005253183
- Peptide Label: isoform X1
- UniProtKB: Q9C035 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005253241   ⟸   XM_005253184
- Peptide Label: isoform X2
- UniProtKB: Q9C035 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006718421   ⟸   XM_006718358
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011518728   ⟸   XM_011520426
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011518729   ⟸   XM_011520427
- Peptide Label: isoform X6
- UniProtKB: Q9C035 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016873951   ⟸   XM_017018462
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_016873950   ⟸   XM_017018461
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_016873952   ⟸   XM_017018463
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_016873949   ⟸   XM_017018460
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSP00000398196   ⟸   ENST00000438025
RefSeq Acc Id: ENSP00000388031   ⟸   ENST00000412903
RefSeq Acc Id: ENSP00000388150   ⟸   ENST00000419850
RefSeq Acc Id: ENSP00000393052   ⟸   ENST00000433961
RefSeq Acc Id: ENSP00000369366   ⟸   ENST00000380027
RefSeq Acc Id: ENSP00000369373   ⟸   ENST00000380034
RefSeq Acc Id: ENSP00000380058   ⟸   ENST00000396847
RefSeq Acc Id: ENSP00000507420   ⟸   ENST00000684655
RefSeq Acc Id: ENSP00000506742   ⟸   ENST00000682968
Protein Domains
B box-type   B30.2/SPRY   RING-type

Promoters
RGD ID:6788772
Promoter ID:HG_KWN:12170
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000305836,   ENST00000380015,   ENST00000396853,   ENST00000396855,   NM_033034,   NM_033092,   NM_033093,   OTTHUMT00000315827,   UC001MBO.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36115,662,606 - 5,663,106 (-)MPROMDB
RGD ID:7219465
Promoter ID:EPDNEW_H15478
Type:multiple initiation site
Name:TRIM5_6
Description:tripartite motif containing 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15479  EPDNEW_H15480  EPDNEW_H15481  EPDNEW_H15484  EPDNEW_H15485  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,664,027 - 5,664,087EPDNEW
RGD ID:7219467
Promoter ID:EPDNEW_H15479
Type:initiation region
Name:TRIM5_4
Description:tripartite motif containing 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15478  EPDNEW_H15480  EPDNEW_H15481  EPDNEW_H15484  EPDNEW_H15485  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,665,168 - 5,665,228EPDNEW
RGD ID:7219469
Promoter ID:EPDNEW_H15480
Type:initiation region
Name:TRIM5_3
Description:tripartite motif containing 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15478  EPDNEW_H15479  EPDNEW_H15481  EPDNEW_H15484  EPDNEW_H15485  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,679,849 - 5,679,909EPDNEW
RGD ID:7219471
Promoter ID:EPDNEW_H15481
Type:initiation region
Name:TRIM5_1
Description:tripartite motif containing 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15478  EPDNEW_H15479  EPDNEW_H15480  EPDNEW_H15484  EPDNEW_H15485  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,685,043 - 5,685,103EPDNEW
RGD ID:7219477
Promoter ID:EPDNEW_H15484
Type:multiple initiation site
Name:TRIM5_2
Description:tripartite motif containing 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H15478  EPDNEW_H15479  EPDNEW_H15480  EPDNEW_H15481  EPDNEW_H15485  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38115,690,295 - 5,690,355EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 11p15.4(chr11:5593209-6447002)x3 copy number gain See cases [RCV000051695] Chr11:5593209..6447002 [GRCh38]
Chr11:5614439..6468232 [GRCh37]
Chr11:5571015..6424808 [NCBI36]
Chr11:11p15.4
uncertain significance
GRCh38/hg38 11p15.4(chr11:3745061-7846057)x3 copy number gain See cases [RCV000053616] Chr11:3745061..7846057 [GRCh38]
Chr11:3766291..7867604 [GRCh37]
Chr11:3722867..7824180 [NCBI36]
Chr11:11p15.4
pathogenic
GRCh38/hg38 11p15.5-13(chr11:202758-31726224)x3 copy number gain See cases [RCV000053613] Chr11:202758..31726224 [GRCh38]
Chr11:202758..31747772 [GRCh37]
Chr11:192758..31704348 [NCBI36]
Chr11:11p15.5-13
pathogenic
GRCh38/hg38 11p15.5-15.1(chr11:446754-18904742)x3 copy number gain See cases [RCV000133997] Chr11:446754..18904742 [GRCh38]
Chr11:446754..18926289 [GRCh37]
Chr11:436754..18882865 [NCBI36]
Chr11:11p15.5-15.1
pathogenic
GRCh38/hg38 11p15.5-15.4(chr11:61793-10727969)x3 copy number gain See cases [RCV000139987] Chr11:61793..10727969 [GRCh38]
Chr11:61793..10749516 [GRCh37]
Chr11:51793..10706092 [NCBI36]
Chr11:11p15.5-15.4
pathogenic
NM_001003818.2(TRIM6):c.613G>A (p.Glu205Lys) single nucleotide variant Malignant melanoma [RCV000069489] Chr11:5605346 [GRCh38]
Chr11:5626576 [GRCh37]
Chr11:5583152 [NCBI36]
Chr11:11p15.4
not provided
NC_000011.10:g.5658592T>C single nucleotide variant Lung cancer [RCV000110158] Chr11:5658592 [GRCh38]
Chr11:5679822 [GRCh37]
Chr11:11p15.4
uncertain significance
NM_021616.6(TRIM34):c.-5G>A single nucleotide variant Malignant tumor of prostate [RCV000149012] Chr11:5632327 [GRCh38]
Chr11:5653557 [GRCh37]
Chr11:11p15.4
uncertain significance
GRCh37/hg19 11p15.5-15.4(chr11:230615-6644927)x3 copy number gain See cases [RCV000449417] Chr11:230615..6644927 [GRCh37]
Chr11:11p15.5-15.4
pathogenic
GRCh37/hg19 11p15.4(chr11:5485210-5719251)x1 copy number loss See cases [RCV000512062] Chr11:5485210..5719251 [GRCh37]
Chr11:11p15.4
likely benign
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470) copy number gain See cases [RCV000511729] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-12(chr11:230615-37698540)x3 copy number gain See cases [RCV000511561] Chr11:230615..37698540 [GRCh37]
Chr11:11p15.5-12
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:230616-134938470)x3 copy number gain See cases [RCV000510881] Chr11:230616..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-15.3(chr11:193146-12643136) copy number gain Russell-Silver syndrome [RCV000767567] Chr11:193146..12643136 [GRCh37]
Chr11:11p15.5-15.3
pathogenic
GRCh37/hg19 11p15.5-14.3(chr11:230615-25584362)x3 copy number gain See cases [RCV000512225] Chr11:230615..25584362 [GRCh37]
Chr11:11p15.5-14.3
pathogenic
GRCh37/hg19 11p15.5-13(chr11:230615-31995219)x3 copy number gain See cases [RCV000512477] Chr11:230615..31995219 [GRCh37]
Chr11:11p15.5-13
pathogenic
GRCh37/hg19 11p15.5-15.4(chr11:230615-9704511)x3 copy number gain not provided [RCV000683369] Chr11:230615..9704511 [GRCh37]
Chr11:11p15.5-15.4
pathogenic
GRCh37/hg19 11p15.5-15.1(chr11:230615-17099213)x3 copy number gain not provided [RCV000683372] Chr11:230615..17099213 [GRCh37]
Chr11:11p15.5-15.1
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:198510-134934063)x3 copy number gain not provided [RCV000737348] Chr11:198510..134934063 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.5-q25(chr11:70864-134938470)x3 copy number gain not provided [RCV000749874] Chr11:70864..134938470 [GRCh37]
Chr11:11p15.5-q25
pathogenic
GRCh37/hg19 11p15.4(chr11:5610674-6032001)x3 copy number gain not provided [RCV000737402] Chr11:5610674..6032001 [GRCh37]
Chr11:11p15.4
benign
GRCh37/hg19 11p15.4(chr11:5701837-5702305)x1 copy number loss not provided [RCV000737404] Chr11:5701837..5702305 [GRCh37]
Chr11:11p15.4
benign
GRCh37/hg19 11p15.4(chr11:5701837-5702409)x0 copy number loss not provided [RCV000737405] Chr11:5701837..5702409 [GRCh37]
Chr11:11p15.4
benign
NM_033034.3(TRIM5):c.744+10G>A single nucleotide variant not provided [RCV000905413] Chr11:5678194 [GRCh38]
Chr11:5699424 [GRCh37]
Chr11:11p15.4
benign
NM_001003818.3(TRIM6):c.510G>T (p.Glu170Asp) single nucleotide variant not provided [RCV000901661] Chr11:5604536 [GRCh38]
Chr11:5625766 [GRCh37]
Chr11:11p15.4
likely benign
NM_033034.3(TRIM5):c.745-7T>C single nucleotide variant not provided [RCV000949343] Chr11:5667718 [GRCh38]
Chr11:5688948 [GRCh37]
Chr11:11p15.4
benign
NM_033034.3(TRIM5):c.687A>G (p.Arg229=) single nucleotide variant not provided [RCV000965163] Chr11:5678261 [GRCh38]
Chr11:5699491 [GRCh37]
Chr11:11p15.4
benign
GRCh37/hg19 11p15.5-13(chr11:235934-33826995)x3 copy number gain not provided [RCV001006372] Chr11:235934..33826995 [GRCh37]
Chr11:11p15.5-13
pathogenic
GRCh37/hg19 11p15.4(chr11:5505304-6199376)x3 copy number gain not provided [RCV001006381] Chr11:5505304..6199376 [GRCh37]
Chr11:11p15.4
likely benign
NM_001003818.3(TRIM6):c.546G>A (p.Glu182=) single nucleotide variant not provided [RCV000929707] Chr11:5604572 [GRCh38]
Chr11:5625802 [GRCh37]
Chr11:11p15.4
likely benign
NM_033034.3(TRIM5):c.1436C>T (p.Pro479Leu) single nucleotide variant not provided [RCV000947320] Chr11:5664855 [GRCh38]
Chr11:5686085 [GRCh37]
Chr11:11p15.4
benign
GRCh37/hg19 11p15.4(chr11:5642000-5853662)x1 copy number loss not provided [RCV001259589] Chr11:5642000..5853662 [GRCh37]
Chr11:11p15.4
uncertain significance
GRCh37/hg19 11p15.5-15.4(chr11:210300-8664358)x3 copy number gain Russell-Silver syndrome [RCV001263222] Chr11:210300..8664358 [GRCh37]
Chr11:11p15.5-15.4
pathogenic
GRCh37/hg19 11p15.4(chr11:5485211-5693876)x1 copy number loss not provided [RCV001259584] Chr11:5485211..5693876 [GRCh37]
Chr11:11p15.4
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:16276 AgrOrtholog
COSMIC TRIM5 COSMIC
Ensembl Genes ENSG00000132256 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000369366 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000369373 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000380058 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000388031 UniProtKB/TrEMBL
  ENSP00000388150 UniProtKB/TrEMBL
  ENSP00000393052 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000398196 UniProtKB/TrEMBL
  ENSP00000506742 ENTREZGENE
  ENSP00000507420 ENTREZGENE
Ensembl Transcript ENST00000380027 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000380034 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000396847 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000412903 UniProtKB/TrEMBL
  ENST00000419850 UniProtKB/TrEMBL
  ENST00000433961 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000438025 UniProtKB/TrEMBL
  ENST00000682968 ENTREZGENE
  ENST00000684417 ENTREZGENE
  ENST00000684655 ENTREZGENE
Gene3D-CATH 2.60.120.920 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000132256 GTEx
HGNC ID HGNC:16276 ENTREZGENE
Human Proteome Map TRIM5 Human Proteome Map
InterPro B30.2/SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  B30.2/SPRY_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Butyrophylin_SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ConA-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPRY_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf-RING_LisH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_B-box UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:85363 UniProtKB/Swiss-Prot
NCBI Gene 85363 ENTREZGENE
OMIM 608487 OMIM
Pfam SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-B_box UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-RING_UBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA38109 PharmGKB
PRINTS BUTYPHLNCDUF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE B302_SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_BBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_RING_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_RING_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BBOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  RING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPRY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49899 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B1Q3L0_HUMAN UniProtKB/TrEMBL
  C9JWN8_HUMAN UniProtKB/TrEMBL
  D8L1Z7_HUMAN UniProtKB/TrEMBL
  D8L1Z8_HUMAN UniProtKB/TrEMBL
  D8L1Z9_HUMAN UniProtKB/TrEMBL
  D8L200_HUMAN UniProtKB/TrEMBL
  D8L201_HUMAN UniProtKB/TrEMBL
  D8L202_HUMAN UniProtKB/TrEMBL
  D8L203_HUMAN UniProtKB/TrEMBL
  E7EQQ5_HUMAN UniProtKB/TrEMBL
  H7C134_HUMAN UniProtKB/TrEMBL
  L7RET5_HUMAN UniProtKB/TrEMBL
  L7REZ6_HUMAN UniProtKB/TrEMBL
  Q05CU3_HUMAN UniProtKB/TrEMBL
  Q9C035 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary A6NGQ1 UniProtKB/Swiss-Prot
  A8WFA8 UniProtKB/Swiss-Prot
  D3DQS8 UniProtKB/Swiss-Prot
  D3DQS9 UniProtKB/Swiss-Prot
  G3GJY1 UniProtKB/Swiss-Prot
  Q2MLV4 UniProtKB/Swiss-Prot
  Q2MLV8 UniProtKB/Swiss-Prot
  Q2MLV9 UniProtKB/Swiss-Prot
  Q2MLW1 UniProtKB/Swiss-Prot
  Q2MLW3 UniProtKB/Swiss-Prot
  Q2MLW4 UniProtKB/Swiss-Prot
  Q2MLW6 UniProtKB/Swiss-Prot
  Q2MLW7 UniProtKB/Swiss-Prot
  Q2MLX1 UniProtKB/Swiss-Prot
  Q2MLX2 UniProtKB/Swiss-Prot
  Q2MLX3 UniProtKB/Swiss-Prot
  Q2MLX5 UniProtKB/Swiss-Prot
  Q2MLY3 UniProtKB/Swiss-Prot
  Q2MLY4 UniProtKB/Swiss-Prot
  Q2V6Q6 UniProtKB/Swiss-Prot
  Q6GX26 UniProtKB/Swiss-Prot
  Q8WU46 UniProtKB/Swiss-Prot
  Q96SR5 UniProtKB/Swiss-Prot
  Q9C031 UniProtKB/Swiss-Prot
  Q9C032 UniProtKB/Swiss-Prot
  Q9C033 UniProtKB/Swiss-Prot
  Q9C034 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 TRIM5  tripartite motif containing 5  TRIM5  tripartite motif-containing 5  Symbol and/or name change 5135510 APPROVED