NDUFAF4 (NADH:ubiquinone oxidoreductase complex assembly factor 4) - Rat Genome Database

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Gene: NDUFAF4 (NADH:ubiquinone oxidoreductase complex assembly factor 4) Homo sapiens
Analyze
Symbol: NDUFAF4
Name: NADH:ubiquinone oxidoreductase complex assembly factor 4
RGD ID: 1343021
HGNC Page HGNC:21034
Description: Predicted to enable calmodulin binding activity. Involved in defense response to virus and mitochondrial respiratory chain complex I assembly. Located in cytosol and mitochondrial membrane. Implicated in nuclear type mitochondrial complex I deficiency 15.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: bA22L21.1; C6orf66; hormone-regulated proliferation-associated protein of 20 kDa; hormone-regulated proliferation-associated protein, 20 kDa; HRPAP20; HSPC125; MC1DN15; My013; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4; NADH dehydrogenase (ubiquinone) complex I, assembly factor 4; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: NDUFAF4P1   NDUFAF4P2   NDUFAF4P3   NDUFAF4P4  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38696,889,315 - 96,897,891 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl696,889,315 - 96,897,891 (-)EnsemblGRCh38hg38GRCh38
GRCh37697,337,191 - 97,345,767 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36697,445,609 - 97,452,476 (-)NCBINCBI36Build 36hg18NCBI36
Build 34697,445,611 - 97,452,476NCBI
Celera697,979,234 - 97,987,815 (-)NCBICelera
Cytogenetic Map6q16.1NCBI
HuRef694,771,407 - 94,779,988 (-)NCBIHuRef
CHM1_1697,599,200 - 97,607,781 (-)NCBICHM1_1
T2T-CHM13v2.0698,061,115 - 98,069,692 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-amino-2,6-dinitrotoluene  (ISO)
5-fluorouracil  (EXP)
6-propyl-2-thiouracil  (ISO)
aflatoxin B1  (EXP)
all-trans-retinoic acid  (EXP)
amitrole  (ISO)
arsenite(3-)  (EXP)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
cyclosporin A  (EXP)
cylindrospermopsin  (EXP)
dibenzo[a,l]pyrene  (ISO)
dibutyl phthalate  (ISO)
dioxygen  (EXP,ISO)
doxorubicin  (EXP)
enzyme inhibitor  (EXP)
epoxiconazole  (ISO)
ethanol  (ISO)
fenthion  (ISO)
flutamide  (ISO)
formaldehyde  (EXP)
gefitinib  (ISO)
gentamycin  (ISO)
methidathion  (ISO)
methyl methanesulfonate  (EXP)
methylmercury chloride  (EXP)
methylparaben  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
naphthalene  (ISO)
nefazodone  (ISO)
nevirapine  (ISO)
nimesulide  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorononanoic acid  (EXP)
perfluorooctanoic acid  (EXP)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
silicon dioxide  (EXP)
sodium dichromate  (ISO)
T-2 toxin  (ISO)
tetrachloromethane  (ISO)
thimerosal  (EXP)
thioacetamide  (ISO)
titanium dioxide  (ISO)
trichostatin A  (EXP)
triptonide  (ISO)
trovafloxacin  (ISO)
valproic acid  (EXP,ISO)
vorinostat  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Abnormal mitochondria in muscle tissue  (IAGP)
Ataxia  (IAGP)
Autosomal recessive inheritance  (IAGP)
Bilateral tonic-clonic seizure  (IAGP)
Blindness  (IAGP)
Cerebellar atrophy  (IAGP)
CNS demyelination  (IAGP)
Congenital onset  (IAGP)
Decreased activity of mitochondrial complex I  (IAGP)
Diabetes mellitus  (IAGP)
Dystonia  (IAGP)
Encephalopathy  (IAGP)
Failure to thrive  (IAGP)
Feeding difficulties  (IAGP)
Fetal distress  (IAGP)
Flexion contracture  (IAGP)
Focal T2 hyperintense brainstem lesion  (IAGP)
Generalized hypotonia  (IAGP)
Global developmental delay  (IAGP)
Hearing impairment  (IAGP)
Hepatomegaly  (IAGP)
Hyperreflexia  (IAGP)
Hypertrophic cardiomyopathy  (IAGP)
Hypoglycemia  (IAGP)
Hypotonia  (IAGP)
Increased circulating lactate concentration  (IAGP)
Increased CSF lactate  (IAGP)
Increased serum pyruvate  (IAGP)
Intrauterine growth retardation  (IAGP)
Irritability  (IAGP)
Kyphosis  (IAGP)
Lactic acidosis  (IAGP)
Lethargy  (IAGP)
Leukodystrophy  (IAGP)
Leukoencephalopathy  (IAGP)
Metabolic acidosis  (IAGP)
Microcephaly  (IAGP)
Mitochondrial myopathy  (IAGP)
Muscle weakness  (IAGP)
Myopathy  (IAGP)
Neonatal death  (IAGP)
Nystagmus  (IAGP)
Optic atrophy  (IAGP)
Optic disc pallor  (IAGP)
Optic neuropathy  (IAGP)
Paroxysmal involuntary eye movements  (IAGP)
Poor head control  (IAGP)
Proximal tubulopathy  (IAGP)
Ptosis  (IAGP)
Reduced eye contact  (IAGP)
Respiratory insufficiency  (IAGP)
Sensorineural hearing impairment  (IAGP)
Spastic tetraplegia  (IAGP)
Strabismus  (IAGP)
Vomiting  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
Additional References at PubMed
PMID:11042152   PMID:12477932   PMID:14574404   PMID:14871833   PMID:15342556   PMID:15489334   PMID:16344560   PMID:17001319   PMID:17909269   PMID:18029348   PMID:18179882   PMID:19352385  
PMID:19463981   PMID:19688755   PMID:20877624   PMID:21873635   PMID:22939629   PMID:23670274   PMID:24344204   PMID:25416956   PMID:25659154   PMID:25910212   PMID:26186194   PMID:26687479  
PMID:26972000   PMID:27173435   PMID:27432908   PMID:27499296   PMID:28380382   PMID:28514442   PMID:28853723   PMID:29395067   PMID:29568061   PMID:29676528   PMID:29911972   PMID:30022168  
PMID:30572598   PMID:30833792   PMID:31056398   PMID:31056421   PMID:31091453   PMID:31267705   PMID:31617661   PMID:31871319   PMID:32296183   PMID:32628020   PMID:32814053   PMID:32877691  
PMID:32949790   PMID:33545068   PMID:33635491   PMID:33957083   PMID:33961781   PMID:34079125   PMID:34709727   PMID:35013218   PMID:35256949   PMID:35545034   PMID:35559673   PMID:35944360  
PMID:36114006   PMID:36538041   PMID:37787384   PMID:37827155   PMID:38113892   PMID:38360978  


Genomics

Comparative Map Data
NDUFAF4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38696,889,315 - 96,897,891 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl696,889,315 - 96,897,891 (-)EnsemblGRCh38hg38GRCh38
GRCh37697,337,191 - 97,345,767 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36697,445,609 - 97,452,476 (-)NCBINCBI36Build 36hg18NCBI36
Build 34697,445,611 - 97,452,476NCBI
Celera697,979,234 - 97,987,815 (-)NCBICelera
Cytogenetic Map6q16.1NCBI
HuRef694,771,407 - 94,779,988 (-)NCBIHuRef
CHM1_1697,599,200 - 97,607,781 (-)NCBICHM1_1
T2T-CHM13v2.0698,061,115 - 98,069,692 (-)NCBIT2T-CHM13v2.0
Ndufaf4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39424,898,083 - 24,905,001 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl424,898,083 - 24,905,001 (+)EnsemblGRCm39 Ensembl
GRCm38424,898,083 - 24,905,001 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl424,898,083 - 24,905,001 (+)EnsemblGRCm38mm10GRCm38
MGSCv37424,825,230 - 24,832,148 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36424,988,731 - 24,995,631 (+)NCBIMGSCv36mm8
Celera424,633,450 - 24,640,391 (+)NCBICelera
Cytogenetic Map4A3NCBI
cM Map410.52NCBI
Ndufaf4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8543,401,795 - 43,406,967 (+)NCBIGRCr8
mRatBN7.2538,605,169 - 38,610,341 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl538,605,153 - 38,610,336 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx540,697,761 - 40,702,935 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0542,296,782 - 42,301,956 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0542,230,101 - 42,235,275 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0539,251,370 - 39,256,542 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl539,251,337 - 39,257,512 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0543,880,679 - 43,885,851 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4539,939,787 - 39,944,959 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1539,939,965 - 39,945,137 (+)NCBI
Celera537,540,312 - 37,545,484 (+)NCBICelera
Cytogenetic Map5q21NCBI
Ndufaf4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541122,878,595 - 22,882,770 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541122,878,031 - 22,882,723 (-)NCBIChiLan1.0ChiLan1.0
NDUFAF4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25116,929,208 - 116,937,796 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16114,807,384 - 114,815,971 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0694,723,579 - 94,732,163 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1698,609,631 - 98,618,189 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl698,609,110 - 98,619,089 (-)Ensemblpanpan1.1panPan2
NDUFAF4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11255,311,482 - 55,319,879 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1255,313,148 - 55,320,381 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1255,131,013 - 55,139,434 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01256,127,251 - 56,135,653 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1256,127,264 - 56,136,149 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11255,463,438 - 55,471,843 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01255,323,995 - 55,332,410 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01255,572,343 - 55,580,773 (-)NCBIUU_Cfam_GSD_1.0
Ndufaf4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494689,893,297 - 89,898,570 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936699829,422 - 834,723 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936699829,441 - 834,709 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NDUFAF4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl164,034,406 - 64,044,800 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1164,038,277 - 64,044,824 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2172,407,811 - 72,414,346 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NDUFAF4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11376,997,444 - 77,004,570 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1376,997,297 - 77,006,999 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604049,303,374 - 49,311,383 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ndufaf4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248108,450,126 - 8,456,420 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248108,450,186 - 8,457,339 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NDUFAF4
101 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NM_014165.4(NDUFAF4):c.194T>C (p.Leu65Pro) single nucleotide variant Mitochondrial complex I deficiency [RCV000000826] Chr6:96896790 [GRCh38]
Chr6:97344666 [GRCh37]
Chr6:6q16.1
pathogenic
NM_014165.4(NDUFAF4):c.*137A>C single nucleotide variant not provided [RCV001544882] Chr6:96890967 [GRCh38]
Chr6:97338843 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.420G>A (p.Gln140=) single nucleotide variant Mitochondrial complex 1 deficiency, nuclear type 15 [RCV001778735]|Mitochondrial complex I deficiency, nuclear type 1 [RCV000328919]|not provided [RCV000676774]|not specified [RCV000117706] Chr6:96891212 [GRCh38]
Chr6:97339088 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.430T>C (p.Leu144=) single nucleotide variant Mitochondrial complex 1 deficiency, nuclear type 15 [RCV001778736]|Mitochondrial complex I deficiency, nuclear type 1 [RCV000271558]|not provided [RCV000676773]|not specified [RCV000117707] Chr6:96891202 [GRCh38]
Chr6:97339078 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.111C>T (p.Asn37=) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001164696]|not provided [RCV000892181]|not specified [RCV000127124] Chr6:96897691 [GRCh38]
Chr6:97345567 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.280A>C (p.Arg94=) single nucleotide variant not provided [RCV002055700]|not specified [RCV000127125] Chr6:96891352 [GRCh38]
Chr6:97339228 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.120G>A (p.Leu40=) single nucleotide variant Mitochondrial complex 1 deficiency, nuclear type 15 [RCV001803001]|Mitochondrial complex I deficiency, nuclear type 1 [RCV001164695]|not provided [RCV000756413]|not specified [RCV000127126] Chr6:96897682 [GRCh38]
Chr6:97345558 [GRCh37]
Chr6:6q16.1
benign|uncertain significance
GRCh38/hg38 6q14.2-16.1(chr6:83838303-98822313)x1 copy number loss See cases [RCV000135773] Chr6:83838303..98822313 [GRCh38]
Chr6:84548022..99270189 [GRCh37]
Chr6:84604741..99376910 [NCBI36]
Chr6:6q14.2-16.1
pathogenic
GRCh38/hg38 6q13-24.1(chr6:74382807-142040500)x3 copy number gain See cases [RCV000139729] Chr6:74382807..142040500 [GRCh38]
Chr6:75092523..142361637 [GRCh37]
Chr6:75149243..142403330 [NCBI36]
Chr6:6q13-24.1
pathogenic
GRCh38/hg38 6q16.1-22.31(chr6:96609994-122161548)x1 copy number loss See cases [RCV000139465] Chr6:96609994..122161548 [GRCh38]
Chr6:97057870..122482694 [GRCh37]
Chr6:97164591..122524393 [NCBI36]
Chr6:6q16.1-22.31
pathogenic
NM_014165.4(NDUFAF4):c.*1443G>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000262685] Chr6:96889661 [GRCh38]
Chr6:97337537 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.238C>A (p.Gln80Lys) single nucleotide variant not specified [RCV000200316] Chr6:96896746 [GRCh38]
Chr6:97344622 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.20_21delinsTT (p.Arg7Leu) indel not specified [RCV000197419] Chr6:96897781..96897782 [GRCh38]
Chr6:97345657..97345658 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.70A>G (p.Lys24Glu) single nucleotide variant not provided [RCV000198576] Chr6:96897732 [GRCh38]
Chr6:97345608 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1487A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000268561] Chr6:96889617 [GRCh38]
Chr6:97337493 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1062T>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000345543] Chr6:96890042 [GRCh38]
Chr6:97337918 [GRCh37]
Chr6:6q16.1
likely benign|uncertain significance
NM_014165.4(NDUFAF4):c.*690G>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000396406] Chr6:96890414 [GRCh38]
Chr6:97338290 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*387C>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000396414] Chr6:96890717 [GRCh38]
Chr6:97338593 [GRCh37]
Chr6:6q16.1
likely benign|uncertain significance
NM_014165.4(NDUFAF4):c.*1447T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000354926] Chr6:96889657 [GRCh38]
Chr6:97337533 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1671T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000303762] Chr6:96889433 [GRCh38]
Chr6:97337309 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.184C>T (p.Leu62=) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000323220]|not provided [RCV000879095] Chr6:96896800 [GRCh38]
Chr6:97344676 [GRCh37]
Chr6:6q16.1
benign|uncertain significance
NM_014165.4(NDUFAF4):c.*289C>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000325406] Chr6:96890815 [GRCh38]
Chr6:97338691 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*332A>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000273464] Chr6:96890772 [GRCh38]
Chr6:97338648 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.*1362C>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000275165] Chr6:96889742 [GRCh38]
Chr6:97337618 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1203A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000332635] Chr6:96889901 [GRCh38]
Chr6:97337777 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*350A>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000356500] Chr6:96890754 [GRCh38]
Chr6:97338630 [GRCh37]
Chr6:6q16.1
likely benign|uncertain significance
NM_014165.4(NDUFAF4):c.491T>A (p.Phe164Tyr) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000382393]|not specified [RCV000423154] Chr6:96891141 [GRCh38]
Chr6:97339017 [GRCh37]
Chr6:6q16.1
likely benign|uncertain significance
NM_014165.4(NDUFAF4):c.-40C>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000404642] Chr6:96897841 [GRCh38]
Chr6:97345717 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*459A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000334469] Chr6:96890645 [GRCh38]
Chr6:97338521 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1053A>G single nucleotide variant Mitochondrial complex I deficiency [RCV000383714] Chr6:96890051 [GRCh38]
Chr6:97337927 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*294T>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000277352] Chr6:96890810 [GRCh38]
Chr6:97338686 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1642T>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000360842] Chr6:96889462 [GRCh38]
Chr6:97337338 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1363G>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000386306] Chr6:96889741 [GRCh38]
Chr6:97337617 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*301T>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000369579]|not provided [RCV001537432] Chr6:96890803 [GRCh38]
Chr6:97338679 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.*986A>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000339758] Chr6:96890118 [GRCh38]
Chr6:97337994 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*323A>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000312171] Chr6:96890781 [GRCh38]
Chr6:97338657 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.*382T>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000299285] Chr6:96890722 [GRCh38]
Chr6:97338598 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.*1481T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000297975] Chr6:96889623 [GRCh38]
Chr6:97337499 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.-49C>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000282372] Chr6:96897850 [GRCh38]
Chr6:97345726 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1375G>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000320120] Chr6:96889729 [GRCh38]
Chr6:97337605 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.241-18dup duplication Mitochondrial complex 1 deficiency, nuclear type 15 [RCV001778943]|Mitochondrial complex I deficiency [RCV000376533]|not provided [RCV000676776] Chr6:96891399..96891400 [GRCh38]
Chr6:97339275..97339276 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.-32del deletion Mitochondrial complex I deficiency [RCV000278744] Chr6:96897833 [GRCh38]
Chr6:97345709 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6q14.1-16.1(chr6:78911022-98909173)x1 copy number loss See cases [RCV002292710] Chr6:78911022..98909173 [GRCh37]
Chr6:6q14.1-16.1
uncertain significance
NM_014165.4(NDUFAF4):c.-24C>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000380202] Chr6:96897825 [GRCh38]
Chr6:97345701 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1008T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000291794] Chr6:96890096 [GRCh38]
Chr6:97337972 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1748T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000347095] Chr6:96889356 [GRCh38]
Chr6:97337232 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*612A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000305325] Chr6:96890492 [GRCh38]
Chr6:97338368 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.223C>G (p.Pro75Ala) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000284369] Chr6:96896761 [GRCh38]
Chr6:97344637 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.-33G>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000336098] Chr6:96897834 [GRCh38]
Chr6:97345710 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1154A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000389364] Chr6:96889950 [GRCh38]
Chr6:97337826 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1121A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000288104] Chr6:96889983 [GRCh38]
Chr6:97337859 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1727T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV000397295] Chr6:96889377 [GRCh38]
Chr6:97337253 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.7G>C (p.Ala3Pro) single nucleotide variant Mitochondrial complex 1 deficiency, nuclear type 15 [RCV000754577]|not provided [RCV000591072] Chr6:96897795 [GRCh38]
Chr6:97345671 [GRCh37]
Chr6:6q16.1
pathogenic|likely pathogenic|uncertain significance
NM_001323258.2(KLHL32):c.-2183CT[3] microsatellite not provided [RCV001572259] Chr6:96898115..96898116 [GRCh38]
Chr6:97345991..97345992 [GRCh37]
Chr6:6q16.1
likely benign
GRCh37/hg19 6q15-16.3(chr6:92576950-104658245)x1 copy number loss See cases [RCV000446720] Chr6:92576950..104658245 [GRCh37]
Chr6:6q15-16.3
pathogenic
NM_014165.4(NDUFAF4):c.40C>A (p.Leu14Ile) single nucleotide variant Mitochondrial complex 1 deficiency, nuclear type 15 [RCV000999808]|not provided [RCV000419279] Chr6:96897762 [GRCh38]
Chr6:97345638 [GRCh37]
Chr6:6q16.1
benign|likely benign|conflicting interpretations of pathogenicity
GRCh37/hg19 6q14.3-22.31(chr6:85988428-120548687)x1 copy number loss See cases [RCV000445666] Chr6:85988428..120548687 [GRCh37]
Chr6:6q14.3-22.31
pathogenic
NM_014165.4(NDUFAF4):c.-25C>T single nucleotide variant not specified [RCV000429876] Chr6:96897826 [GRCh38]
Chr6:97345702 [GRCh37]
Chr6:6q16.1
likely benign
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482)x3 copy number gain See cases [RCV000512067] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27
pathogenic
NM_014165.4(NDUFAF4):c.1A>G (p.Met1Val) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV002279722]|not provided [RCV000498810] Chr6:96897801 [GRCh38]
Chr6:97345677 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6p25.3-q27(chr6:156975-170919482) copy number gain See cases [RCV000510595] Chr6:156975..170919482 [GRCh37]
Chr6:6p25.3-q27
pathogenic
NM_014165.3(NDUFAF4):c.241-10_241-9dup duplication not provided [RCV000676775] Chr6:96891399..96891400 [GRCh38]
Chr6:97339275..97339276 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.270G>A (p.Pro90=) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001164693]|not specified [RCV000612845] Chr6:96891362 [GRCh38]
Chr6:97339238 [GRCh37]
Chr6:6q16.1
likely benign|uncertain significance
GRCh37/hg19 6q16.1-21(chr6:94202605-109878834)x1 copy number loss See cases [RCV000512470] Chr6:94202605..109878834 [GRCh37]
Chr6:6q16.1-21
pathogenic
GRCh37/hg19 6q16.1(chr6:96930503-97358358)x3 copy number gain not provided [RCV000682697] Chr6:96930503..97358358 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6q14.1-16.1(chr6:81261418-97796269)x3 copy number gain not provided [RCV000682688] Chr6:81261418..97796269 [GRCh37]
Chr6:6q14.1-16.1
pathogenic
GRCh37/hg19 6q16.1-22.1(chr6:95549951-116684929)x1 copy number loss not provided [RCV000682693] Chr6:95549951..116684929 [GRCh37]
Chr6:6q16.1-22.1
pathogenic
GRCh37/hg19 6p25.3-q27(chr6:108666-170980171)x3 copy number gain not provided [RCV000745403] Chr6:108666..170980171 [GRCh37]
Chr6:6p25.3-q27
pathogenic
GRCh37/hg19 6p25.3-q27(chr6:60107-171054786)x3 copy number gain not provided [RCV000745400] Chr6:60107..171054786 [GRCh37]
Chr6:6p25.3-q27
pathogenic
GRCh37/hg19 6p25.3-q27(chr6:165632-170919470)x3 copy number gain not provided [RCV000745404] Chr6:165632..170919470 [GRCh37]
Chr6:6p25.3-q27
pathogenic
NM_014165.4(NDUFAF4):c.350T>G (p.Val117Gly) single nucleotide variant Inborn genetic diseases [RCV003268491] Chr6:96891282 [GRCh38]
Chr6:97339158 [GRCh37]
Chr6:6q16.1
uncertain significance
NC_000006.12:g.96897897dup duplication not provided [RCV001546725] Chr6:96897893..96897894 [GRCh38]
Chr6:97345769..97345770 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.241-8G>T single nucleotide variant not provided [RCV000882725] Chr6:96891399 [GRCh38]
Chr6:97339275 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.136+149C>T single nucleotide variant not provided [RCV000834906] Chr6:96897517 [GRCh38]
Chr6:97345393 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.137-331C>G single nucleotide variant not provided [RCV000837448] Chr6:96897178 [GRCh38]
Chr6:97345054 [GRCh37]
Chr6:6q16.1
benign
NM_001323258.2(KLHL32):c.-2186A>G single nucleotide variant not provided [RCV000841113] Chr6:96898113 [GRCh38]
Chr6:97345989 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.*1213C>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001164581] Chr6:96889891 [GRCh38]
Chr6:97337767 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.-11G>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001164698] Chr6:96897812 [GRCh38]
Chr6:97345688 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.136+309C>T single nucleotide variant not provided [RCV000841085] Chr6:96897357 [GRCh38]
Chr6:97345233 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.*1214G>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001164580] Chr6:96889890 [GRCh38]
Chr6:97337766 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.*1368A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001162539] Chr6:96889736 [GRCh38]
Chr6:97337612 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6q16.1(chr6:96925561-97358357)x3 copy number gain not provided [RCV000846189] Chr6:96925561..97358357 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.60G>T (p.Arg20=) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001164697] Chr6:96897742 [GRCh38]
Chr6:97345618 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*305C>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001161063] Chr6:96890799 [GRCh38]
Chr6:97338675 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*289C>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001161064] Chr6:96890815 [GRCh38]
Chr6:97338691 [GRCh37]
Chr6:6q16.1
uncertain significance
NC_000006.12:g.96898025A>G single nucleotide variant not provided [RCV001715674] Chr6:96898025 [GRCh38]
Chr6:97345901 [GRCh37]
Chr6:6q16.1
benign
NC_000006.12:g.96897902C>G single nucleotide variant not provided [RCV001716411] Chr6:96897902 [GRCh38]
Chr6:97345778 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.197A>G (p.Lys66Arg) single nucleotide variant not provided [RCV001665298] Chr6:96896787 [GRCh38]
Chr6:97344663 [GRCh37]
Chr6:6q16.1
conflicting interpretations of pathogenicity|uncertain significance
NM_014165.4(NDUFAF4):c.*639A>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001159666] Chr6:96890465 [GRCh38]
Chr6:97338341 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.189G>C (p.Ser63=) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001164694] Chr6:96896795 [GRCh38]
Chr6:97344671 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6q16.1-21(chr6:96596732-105554568)x1 copy number loss not provided [RCV002472644] Chr6:96596732..105554568 [GRCh37]
Chr6:6q16.1-21
pathogenic
NM_014165.4(NDUFAF4):c.137-37C>T single nucleotide variant not provided [RCV001591513] Chr6:96896884 [GRCh38]
Chr6:97344760 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.*14A>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001162633] Chr6:96891090 [GRCh38]
Chr6:97338966 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1247A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001162542] Chr6:96889857 [GRCh38]
Chr6:97337733 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*782T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001159665] Chr6:96890322 [GRCh38]
Chr6:97338198 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.-20G>T single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001159770] Chr6:96897821 [GRCh38]
Chr6:97345697 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.-65C>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001159771] Chr6:96897866 [GRCh38]
Chr6:97345742 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*482A>G single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001159667] Chr6:96890622 [GRCh38]
Chr6:97338498 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1728G>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001160932] Chr6:96889376 [GRCh38]
Chr6:97337252 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.-59dup duplication not provided [RCV001588457] Chr6:96897859..96897860 [GRCh38]
Chr6:97345735..97345736 [GRCh37]
Chr6:6q16.1
benign|likely benign
NM_014165.4(NDUFAF4):c.*1299G>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001162541] Chr6:96889805 [GRCh38]
Chr6:97337681 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.*119T>C single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001162632] Chr6:96890985 [GRCh38]
Chr6:97338861 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.*1334G>A single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001162540] Chr6:96889770 [GRCh38]
Chr6:97337646 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.268C>T (p.Pro90Ser) single nucleotide variant Mitochondrial complex I deficiency, nuclear type 1 [RCV001333727] Chr6:96891364 [GRCh38]
Chr6:97339240 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.64A>G (p.Ile22Val) single nucleotide variant not provided [RCV001309809] Chr6:96897738 [GRCh38]
Chr6:97345614 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.83C>G (p.Ser28Cys) single nucleotide variant Mitochondrial complex 1 deficiency, nuclear type 15 [RCV001330487] Chr6:96897719 [GRCh38]
Chr6:97345595 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.137-397T>A single nucleotide variant not provided [RCV002259452] Chr6:96897244 [GRCh38]
Chr6:97345120 [GRCh37]
Chr6:6q16.1
likely benign
GRCh37/hg19 6q14.3-22.31(chr6:85988428-120548687) copy number loss not specified [RCV002053595] Chr6:85988428..120548687 [GRCh37]
Chr6:6q14.3-22.31
pathogenic
GRCh37/hg19 6q16.1(chr6:97115084-97372081)x1 copy number loss not provided [RCV001832929] Chr6:97115084..97372081 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6q15-22.2(chr6:92054891-118329651) copy number loss not specified [RCV002053598] Chr6:92054891..118329651 [GRCh37]
Chr6:6q15-22.2
pathogenic
GRCh37/hg19 6q16.1(chr6:96930503-97358358) copy number gain not specified [RCV002053600] Chr6:96930503..97358358 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6q15-16.3(chr6:92576950-104658245) copy number loss not specified [RCV002053599] Chr6:92576950..104658245 [GRCh37]
Chr6:6q15-16.3
pathogenic
NM_014165.4(NDUFAF4):c.476T>C (p.Phe159Ser) single nucleotide variant not provided [RCV002020068] Chr6:96891156 [GRCh38]
Chr6:97339032 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.59G>A (p.Arg20Gln) single nucleotide variant Inborn genetic diseases [RCV002564417]|not provided [RCV001953977] Chr6:96897743 [GRCh38]
Chr6:97345619 [GRCh37]
Chr6:6q16.1
uncertain significance
NC_000006.11:g.(?_97338980)_(97345677_?)del deletion not provided [RCV001902484] Chr6:97338980..97345677 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.88G>T (p.Ala30Ser) single nucleotide variant not provided [RCV002016462] Chr6:96897714 [GRCh38]
Chr6:97345590 [GRCh37]
Chr6:6q16.1
uncertain significance
NC_000006.11:g.(?_97338980)_(97339287_?)del deletion not provided [RCV001922932] Chr6:97338980..97339287 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.137-10C>T single nucleotide variant NDUFAF4-related condition [RCV003978567]|not provided [RCV002205177] Chr6:96896857 [GRCh38]
Chr6:97344733 [GRCh37]
Chr6:6q16.1
likely benign
GRCh37/hg19 6q16.1-21(chr6:96946110-106497526)x1 copy number loss not provided [RCV002472620] Chr6:96946110..106497526 [GRCh37]
Chr6:6q16.1-21
pathogenic
NM_014165.4(NDUFAF4):c.62A>T (p.Glu21Val) single nucleotide variant not provided [RCV002615756] Chr6:96897740 [GRCh38]
Chr6:97345616 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.286C>A (p.Pro96Thr) single nucleotide variant not provided [RCV003011866] Chr6:96891346 [GRCh38]
Chr6:97339222 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.136+20T>C single nucleotide variant not provided [RCV002775944] Chr6:96897646 [GRCh38]
Chr6:97345522 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.344C>G (p.Ser115Cys) single nucleotide variant not provided [RCV003034553] Chr6:96891288 [GRCh38]
Chr6:97339164 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.241-9del deletion not provided [RCV002882211] Chr6:96891400 [GRCh38]
Chr6:97339276 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.12A>G (p.Leu4=) single nucleotide variant not provided [RCV002730292] Chr6:96897790 [GRCh38]
Chr6:97345666 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.74T>C (p.Met25Thr) single nucleotide variant Inborn genetic diseases [RCV002859583] Chr6:96897728 [GRCh38]
Chr6:97345604 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.240G>C (p.Gln80His) single nucleotide variant not provided [RCV002695387] Chr6:96896744 [GRCh38]
Chr6:97344620 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.269C>T (p.Pro90Leu) single nucleotide variant Inborn genetic diseases [RCV002620029]|not provided [RCV002620028] Chr6:96891363 [GRCh38]
Chr6:97339239 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.240+17_240+20del microsatellite not provided [RCV002597165] Chr6:96896724..96896727 [GRCh38]
Chr6:97344600..97344603 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.289A>G (p.Lys97Glu) single nucleotide variant not provided [RCV002801284] Chr6:96891343 [GRCh38]
Chr6:97339219 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.51A>C (p.Arg17=) single nucleotide variant not provided [RCV002741650] Chr6:96897751 [GRCh38]
Chr6:97345627 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.9A>G (p.Ala3=) single nucleotide variant not provided [RCV002765645] Chr6:96897793 [GRCh38]
Chr6:97345669 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.419_420delinsGA (p.Gln140Arg) indel not provided [RCV002711805] Chr6:96891212..96891213 [GRCh38]
Chr6:97339088..97339089 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.241-18_241-17insA insertion not provided [RCV002600363] Chr6:96891408..96891409 [GRCh38]
Chr6:97339284..97339285 [GRCh37]
Chr6:6q16.1
benign
NM_014165.4(NDUFAF4):c.241-14_241-13insC insertion not provided [RCV002590279] Chr6:96891404..96891405 [GRCh38]
Chr6:97339280..97339281 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.27C>A (p.Ile9=) single nucleotide variant not provided [RCV002680768] Chr6:96897775 [GRCh38]
Chr6:97345651 [GRCh37]
Chr6:6q16.1
likely benign
NM_014165.4(NDUFAF4):c.202G>A (p.Val68Met) single nucleotide variant Inborn genetic diseases [RCV003361427] Chr6:96896782 [GRCh38]
Chr6:97344658 [GRCh37]
Chr6:6q16.1
uncertain significance
NM_014165.4(NDUFAF4):c.287C>T (p.Pro96Leu) single nucleotide variant Inborn genetic diseases [RCV003376789]|not provided [RCV003778069] Chr6:96891345 [GRCh38]
Chr6:97339221 [GRCh37]
Chr6:6q16.1
uncertain significance
GRCh37/hg19 6q15-21(chr6:92468126-109410569)x1 copy number loss not provided [RCV003482928] Chr6:92468126..109410569 [GRCh37]
Chr6:6q15-21
pathogenic
GRCh37/hg19 6q15-16.3(chr6:91677067-101879124)x3 copy number gain not specified [RCV003986668] Chr6:91677067..101879124 [GRCh37]
Chr6:6q15-16.3
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:822
Count of miRNA genes:551
Interacting mature miRNAs:605
Transcripts:ENST00000316149, ENST00000478382, ENST00000489477
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-52655  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37697,338,052 - 97,338,237UniSTSGRCh37
Build 36697,444,773 - 97,444,958RGDNCBI36
Celera697,980,099 - 97,980,284RGD
Cytogenetic Map6q16.1UniSTS
HuRef694,772,272 - 94,772,457UniSTS
TNG Radiation Hybrid Map658103.0UniSTS
RH26154  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37697,338,947 - 97,339,086UniSTSGRCh37
Build 36697,445,668 - 97,445,807RGDNCBI36
Celera697,980,994 - 97,981,133RGD
Cytogenetic Map6q16.1UniSTS
HuRef694,773,167 - 94,773,306UniSTS
STS-R50676  
Human AssemblyChrPosition (strand)SourceJBrowse
Celera697,980,986 - 97,981,142RGD
Cytogenetic Map6q16.1UniSTS
HuRef694,773,159 - 94,773,315UniSTS
GeneMap99-GB4 RH Map6430.5UniSTS
RH102131  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6q16.1UniSTS
GeneMap99-GB4 RH Map6415.8UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1955 1887 1042 282 982 247 2600 1914 2613 330 1022 1174 49 1 826 1858 5 2
Low 484 1039 684 342 904 218 1757 283 1121 89 438 439 125 378 930 1
Below cutoff 65 65

Sequence


RefSeq Acc Id: ENST00000316149   ⟹   ENSP00000358272
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl696,889,315 - 96,897,891 (-)Ensembl
RefSeq Acc Id: ENST00000478382
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl696,891,012 - 96,896,918 (-)Ensembl
RefSeq Acc Id: ENST00000489477
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl696,891,151 - 96,897,874 (-)Ensembl
RefSeq Acc Id: NM_014165   ⟹   NP_054884
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38696,889,315 - 96,897,891 (-)NCBI
GRCh37697,337,187 - 97,345,767 (-)RGD
Build 36697,445,609 - 97,452,476 (-)NCBI Archive
Celera697,979,234 - 97,987,815 (-)RGD
HuRef694,771,407 - 94,779,988 (-)ENTREZGENE
CHM1_1697,599,200 - 97,607,781 (-)NCBI
T2T-CHM13v2.0698,061,115 - 98,069,692 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_054884 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAF29089 (Get FASTA)   NCBI Sequence Viewer  
  AAG43126 (Get FASTA)   NCBI Sequence Viewer  
  AAH39464 (Get FASTA)   NCBI Sequence Viewer  
  BAG34792 (Get FASTA)   NCBI Sequence Viewer  
  EAW48501 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000358272
  ENSP00000358272.4
GenBank Protein Q9P032 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_054884   ⟸   NM_014165
- UniProtKB: B2R4J5 (UniProtKB/Swiss-Prot),   Q9P032 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSP00000358272   ⟸   ENST00000316149

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9P032-F1-model_v2 AlphaFold Q9P032 1-175 view protein structure

Promoters
RGD ID:7208739
Promoter ID:EPDNEW_H10115
Type:initiation region
Name:NDUFAF4_1
Description:NADH:ubiquinone oxidoreductase complex assembly factor 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38696,897,863 - 96,897,923EPDNEW
RGD ID:6804488
Promoter ID:HG_KWN:54403
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell_2Hour,   K562
Transcripts:OTTHUMT00000041568
Position:
Human AssemblyChrPosition (strand)Source
Build 36697,451,861 - 97,452,361 (-)MPROMDB
RGD ID:6804489
Promoter ID:HG_KWN:54404
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_014165,   OTTHUMT00000041569
Position:
Human AssemblyChrPosition (strand)Source
Build 36697,452,301 - 97,453,142 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:21034 AgrOrtholog
COSMIC NDUFAF4 COSMIC
Ensembl Genes ENSG00000123545 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000316149 ENTREZGENE
  ENST00000316149.8 UniProtKB/Swiss-Prot
GTEx ENSG00000123545 GTEx
HGNC ID HGNC:21034 ENTREZGENE
Human Proteome Map NDUFAF4 Human Proteome Map
InterPro NDUFAF4 UniProtKB/Swiss-Prot
KEGG Report hsa:29078 UniProtKB/Swiss-Prot
NCBI Gene 29078 ENTREZGENE
OMIM 611776 OMIM
PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 4 UniProtKB/Swiss-Prot
  PTHR13338 UniProtKB/Swiss-Prot
Pfam UPF0240 UniProtKB/Swiss-Prot
PharmGKB PA164723808 PharmGKB
UniProt B2R4J5 ENTREZGENE
  NDUF4_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary B2R4J5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-12-22 NDUFAF4  NADH:ubiquinone oxidoreductase complex assembly factor 4  NDUFAF4  NADH dehydrogenase (ubiquinone) complex I, assembly factor 4  Symbol and/or name change 5135510 APPROVED
2012-06-27 NDUFAF4  NADH dehydrogenase (ubiquinone) complex I, assembly factor 4  NDUFAF4  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4  Symbol and/or name change 5135510 APPROVED