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Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | macular corneal dystrophy | | IAGP | | 7240710 | | OMIM | | |
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Imported Disease Annotations - OMIMTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | macular corneal dystrophy | | IAGP | | 7240710 | | OMIM | | |
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# | Reference Title | Reference Citation |
1. | GOAs Human GO annotations | GOA_HUMAN data from the GO Consortium |
2. | OMIM Disease Annotation Pipeline | OMIM Disease Annotation Pipeline |
3. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
4. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
6. | RGD HPO Phenotype Annotation Pipeline | RGD automated import pipeline for human HPO-to-gene-to-disease annotations |
PMID:1433500 | PMID:8419650 | PMID:8644739 | PMID:10913333 | PMID:11017086 | PMID:11087716 | PMID:11139648 | PMID:11181564 | PMID:11278593 | PMID:11352640 | PMID:11818380 | PMID:12218059 |
PMID:12477932 | PMID:12824236 | PMID:12882769 | PMID:12882775 | PMID:12883341 | PMID:14609920 | PMID:14735064 | PMID:14984470 | PMID:15013869 | PMID:15220337 | PMID:15489334 | PMID:15652851 |
PMID:15953452 | PMID:16207214 | PMID:16568029 | PMID:17093400 | PMID:17690104 | PMID:17846354 | PMID:17896316 | PMID:17962390 | PMID:18500531 | PMID:18849568 | PMID:19204788 | PMID:19223992 |
PMID:19365571 | PMID:19844255 | PMID:20539220 | PMID:21242781 | PMID:21873635 | PMID:21887843 | PMID:22261655 | PMID:24311932 | PMID:24801599 | PMID:24926691 | PMID:25081284 | PMID:25086665 |
PMID:26604660 | PMID:27439461 | PMID:27829782 | PMID:28514442 | PMID:30716718 | PMID:32472422 | PMID:33961781 | PMID:34645431 | PMID:34826417 | PMID:35627129 |
CHST6 (Homo sapiens - human) |
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Chst5 (Mus musculus - house mouse) |
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Chst5 (Rattus norvegicus - Norway rat) |
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CHST6 (Pan paniscus - bonobo/pygmy chimpanzee) |
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LOC489707 (Canis lupus familiaris - dog) |
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LOC100522551 (Sus scrofa - pig) |
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CHST6 (Chlorocebus sabaeus - green monkey) |
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Chst6 (Heterocephalus glaber - naked mole-rat) |
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SHGC-144645 |
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CHST6_8463 |
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D5S2354 |
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D10S16 | No map positions available. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GDB:313261 |
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GDB:631802 |
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L17688 |
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L17971 |
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D22S296 |
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D1S1423 |
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L17877 |
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RH36905 |
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D8S2279 |
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D10S16 |
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The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | sensory system | visual system | adipose tissue | appendage | entire extraembryonic component | pharyngeal arch | |
High | ||||||||||||||||||
Medium | 6 | 8 | 65 | 7 | 5 | 2 | 226 | 3 | 283 | 1 | 48 | 41 | 4 | 4 | 1 | |||
Low | 1502 | 1736 | 521 | 169 | 524 | 21 | 1061 | 677 | 3083 | 64 | 775 | 539 | 155 | 1 | 20 | 951 | 3 | 1 |
Below cutoff | 911 | 1066 | 944 | 261 | 1170 | 255 | 2995 | 1469 | 368 | 232 | 627 | 1018 | 15 | 1133 | 1791 | 3 |
RefSeq Transcripts | NG_016442 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_021615 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_163480 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_163481 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005255955 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_011523085 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC009163 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF219991 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF280086 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC036640 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC041645 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC074834 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC074883 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BF510724 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH471114 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CP068262 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HM026170 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HM026171 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HM026172 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
HY106598 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KX099751 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KX099752 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KX099753 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KX099754 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KX099755 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENST00000332272 ⟹ ENSP00000328983 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000390664 ⟹ ENSP00000375079 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000649341 ⟹ ENSP00000497635 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | ENST00000649824 ⟹ ENSP00000496806 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
|
RefSeq Acc Id: | NM_021615 ⟹ NP_067628 | ||||||||||||||||||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
|
||||||||||||||||||||||||||||
Sequence: |
RefSeq Acc Id: | NR_163480 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
RefSeq Acc Id: | NR_163481 | ||||||||||||
RefSeq Status: | REVIEWED | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
|
||||||||||||
Sequence: |
Protein RefSeqs | NP_067628 | (Get FASTA) | NCBI Sequence Viewer |
GenBank Protein | AAG26327 | (Get FASTA) | NCBI Sequence Viewer |
AAG48244 | (Get FASTA) | NCBI Sequence Viewer | |
AAH74834 | (Get FASTA) | NCBI Sequence Viewer | |
AAH74883 | (Get FASTA) | NCBI Sequence Viewer | |
ADG26740 | (Get FASTA) | NCBI Sequence Viewer | |
ADG26741 | (Get FASTA) | NCBI Sequence Viewer | |
ADG26742 | (Get FASTA) | NCBI Sequence Viewer | |
ANG59336 | (Get FASTA) | NCBI Sequence Viewer | |
ANG59337 | (Get FASTA) | NCBI Sequence Viewer | |
ANG59338 | (Get FASTA) | NCBI Sequence Viewer | |
EAW95640 | (Get FASTA) | NCBI Sequence Viewer | |
EAW95641 | (Get FASTA) | NCBI Sequence Viewer | |
Q9GZX3 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_067628 ⟸ NM_021615 |
- Peptide Label: | precursor |
- UniProtKB: | Q9GZX3 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | ENSP00000497635 ⟸ ENST00000649341 |
RefSeq Acc Id: | ENSP00000496806 ⟸ ENST00000649824 |
RefSeq Acc Id: | ENSP00000328983 ⟸ ENST00000332272 |
RefSeq Acc Id: | ENSP00000375079 ⟸ ENST00000390664 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q9GZX3-F1-model_v2 | AlphaFold | Q9GZX3 | 1-395 | view protein structure |
RGD ID: | 6792909 | ||||||||
Promoter ID: | HG_KWN:24278 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | Lymphoblastoid | ||||||||
Transcripts: | NM_021615, UC002FEG.1, UC002FEH.1 | ||||||||
Position: |
|
RGD ID: | 7232863 | ||||||||
Promoter ID: | EPDNEW_H22177 | ||||||||
Type: | initiation region | ||||||||
Name: | CHST6_1 | ||||||||
Description: | carbohydrate sulfotransferase 6 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Name | Type | Condition(s) | Position(s) | Clinical significance |
NM_021615.5(CHST6):c.294C>G (p.Ser98=) | single nucleotide variant | Macular corneal dystrophy [RCV000546195] | Chr16:75479535 [GRCh38] Chr16:75513433 [GRCh37] Chr16:16q23.1 |
benign |
CHST6, REPLACEMENT OF 5-PRIME REGION | variation | Macular corneal dystrophy, type II [RCV000005377] | Chr16:16q22 | pathogenic |
CHST6, DELETION OF 5-PRIME REGION | deletion | Macular corneal dystrophy, type II [RCV000005378] | Chr16:16q22 | pathogenic |
NM_021615.5(CHST6):c.521A>G (p.Lys174Arg) | single nucleotide variant | Macular corneal dystrophy [RCV000005375] | Chr16:75479308 [GRCh38] Chr16:75513206 [GRCh37] Chr16:16q23.1 |
pathogenic|likely pathogenic|conflicting interpretations of pathogenicity |
NM_021615.5(CHST6):c.609C>A (p.Asp203Glu) | single nucleotide variant | Macular corneal dystrophy [RCV000005376] | Chr16:75479220 [GRCh38] Chr16:75513118 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.599T>G (p.Leu200Arg) | single nucleotide variant | Macular corneal dystrophy [RCV000005379]|Macular corneal dystrophy, type II [RCV000005380]|not provided [RCV001091757] | Chr16:75479230 [GRCh38] Chr16:75513128 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.304T>G (p.Cys102Gly) | single nucleotide variant | Macular corneal dystrophy [RCV000005381] | Chr16:75479525 [GRCh38] Chr16:75513423 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.329A>G (p.Tyr110Cys) | single nucleotide variant | Macular corneal dystrophy [RCV000005382] | Chr16:75479500 [GRCh38] Chr16:75513398 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.827T>C (p.Leu276Pro) | single nucleotide variant | Macular corneal dystrophy [RCV000005383] | Chr16:75479002 [GRCh38] Chr16:75512900 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.277C>A (p.Arg93Ser) | single nucleotide variant | Macular corneal dystrophy, type II [RCV000005384] | Chr16:75479552 [GRCh38] Chr16:75513450 [GRCh37] Chr16:16q23.1 |
pathogenic |
GRCh38/hg38 16q22.1-24.3(chr16:70514631-90081985)x3 | copy number gain | See cases [RCV000052422] | Chr16:70514631..90081985 [GRCh38] Chr16:70548534..90148393 [GRCh37] Chr16:69106035..88675894 [NCBI36] Chr16:16q22.1-24.3 |
pathogenic |
GRCh38/hg38 16q21-24.3(chr16:65313395-90081985)x3 | copy number gain | See cases [RCV000052421] | Chr16:65313395..90081985 [GRCh38] Chr16:65347298..90148393 [GRCh37] Chr16:63904799..88675894 [NCBI36] Chr16:16q21-24.3 |
pathogenic |
GRCh38/hg38 16q22.1-23.1(chr16:69918076-76723348)x1 | copy number loss | See cases [RCV000053356] | Chr16:69918076..76723348 [GRCh38] Chr16:69951979..76757245 [GRCh37] Chr16:68509480..75314746 [NCBI36] Chr16:16q22.1-23.1 |
pathogenic |
GRCh38/hg38 16q22.3-23.3(chr16:73049467-82576326)x1 | copy number loss | See cases [RCV000053357] | Chr16:73049467..82576326 [GRCh38] Chr16:73083366..82609931 [GRCh37] Chr16:71640867..81167432 [NCBI36] Chr16:16q22.3-23.3 |
pathogenic |
GRCh38/hg38 16q23.1(chr16:75163906-78064640)x1 | copy number loss | Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053358]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053358]|See cases [RCV000053358] | Chr16:75163906..78064640 [GRCh38] Chr16:75197804..78098537 [GRCh37] Chr16:73755305..76656038 [NCBI36] Chr16:16q23.1 |
pathogenic |
GRCh38/hg38 16q23.1(chr16:75485676-75603079)x3 | copy number gain | See cases [RCV000053894] | Chr16:75485676..75603079 [GRCh38] Chr16:75519574..75636977 [GRCh37] Chr16:74077075..74194478 [NCBI36] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.86C>T (p.Pro29Leu) | single nucleotide variant | Macular corneal dystrophy [RCV000660545] | Chr16:75479743 [GRCh38] Chr16:75513641 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh38/hg38 16q22.1-24.1(chr16:70414573-84908120)x1 | copy number loss | See cases [RCV000133814] | Chr16:70414573..84908120 [GRCh38] Chr16:70448476..84941726 [GRCh37] Chr16:69005977..83499227 [NCBI36] Chr16:16q22.1-24.1 |
pathogenic |
GRCh38/hg38 16q21-24.1(chr16:62925929-84585795)x3 | copy number gain | See cases [RCV000135863] | Chr16:62925929..84585795 [GRCh38] Chr16:62959833..84619401 [GRCh37] Chr16:61517334..83176902 [NCBI36] Chr16:16q21-24.1 |
pathogenic |
GRCh38/hg38 16q22.1-24.3(chr16:70749398-90096995)x3 | copy number gain | See cases [RCV000137495] | Chr16:70749398..90096995 [GRCh38] Chr16:70783301..90163403 [GRCh37] Chr16:69340802..88690904 [NCBI36] Chr16:16q22.1-24.3 |
pathogenic |
GRCh38/hg38 16q21-24.3(chr16:65511483-90096995)x3 | copy number gain | See cases [RCV000139426] | Chr16:65511483..90096995 [GRCh38] Chr16:65545386..90163403 [GRCh37] Chr16:64102887..88690904 [NCBI36] Chr16:16q21-24.3 |
pathogenic |
GRCh38/hg38 16q23.1-24.3(chr16:75377981-90081992)x3 | copy number gain | See cases [RCV000139302] | Chr16:75377981..90081992 [GRCh38] Chr16:75411879..90148400 [GRCh37] Chr16:73969380..88675901 [NCBI36] Chr16:16q23.1-24.3 |
pathogenic |
GRCh38/hg38 16q23.1(chr16:74811982-75698467)x3 | copy number gain | See cases [RCV000139130] | Chr16:74811982..75698467 [GRCh38] Chr16:74845880..75732365 [GRCh37] Chr16:73403381..74289866 [NCBI36] Chr16:16q23.1 |
uncertain significance |
GRCh38/hg38 16q22.1-23.3(chr16:69053457-83274681)x3 | copy number gain | See cases [RCV000142038] | Chr16:69053457..83274681 [GRCh38] Chr16:69087360..83308286 [GRCh37] Chr16:67644861..81865787 [NCBI36] Chr16:16q22.1-23.3 |
pathogenic |
GRCh38/hg38 16q21-24.3(chr16:64389378-90081985)x3 | copy number gain | See cases [RCV000142578] | Chr16:64389378..90081985 [GRCh38] Chr16:64423281..90148393 [GRCh37] Chr16:62980782..88675894 [NCBI36] Chr16:16q21-24.3 |
pathogenic|likely pathogenic |
GRCh38/hg38 16q12.2-24.3(chr16:52899183-90088654)x3 | copy number gain | See cases [RCV000143425] | Chr16:52899183..90088654 [GRCh38] Chr16:52933095..90155062 [GRCh37] Chr16:51490596..88682563 [NCBI36] Chr16:16q12.2-24.3 |
pathogenic |
GRCh38/hg38 16q23.1(chr16:75227456-75731127)x3 | copy number gain | See cases [RCV000143189] | Chr16:75227456..75731127 [GRCh38] Chr16:75261354..75765025 [GRCh37] Chr16:73818855..74322526 [NCBI36] Chr16:16q23.1 |
uncertain significance |
GRCh38/hg38 16q21-23.3(chr16:65957829-83611443)x3 | copy number gain | See cases [RCV000143742] | Chr16:65957829..83611443 [GRCh38] Chr16:65991732..83645048 [GRCh37] Chr16:64549233..82202549 [NCBI36] Chr16:16q21-23.3 |
pathogenic |
NM_021615.5(CHST6):c.993G>T (p.Gln331His) | single nucleotide variant | Macular corneal dystrophy [RCV000885002]|not specified [RCV000177326] | Chr16:75478836 [GRCh38] Chr16:75512734 [GRCh37] Chr16:16q23.1 |
benign|conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 16q23.1-24.3(chr16:74872514-90274440)x3 | copy number gain | See cases [RCV000240108] | Chr16:74872514..90274440 [GRCh37] Chr16:16q23.1-24.3 |
pathogenic |
GRCh37/hg19 16q11.2-24.3(chr16:46615804-90142285)x1 | copy number loss | Ductal breast carcinoma [RCV000207138] | Chr16:46615804..90142285 [GRCh37] Chr16:16q11.2-24.3 |
uncertain significance |
GRCh37/hg19 16q22.2-24.3(chr16:72107834-90142285)x1 | copy number loss | Ductal breast carcinoma [RCV000207182] | Chr16:72107834..90142285 [GRCh37] Chr16:16q22.2-24.3 |
uncertain significance |
Single allele | complex | Ductal breast carcinoma [RCV000207314] | Chr16:56368689..90141355 [GRCh37] Chr16:16q12.2-24.3 |
uncertain significance |
GRCh37/hg19 16q23.1(chr16:75411853-75567059)x3 | copy number gain | not provided [RCV000762775] | Chr16:75411853..75567059 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1810C>T | single nucleotide variant | Macular corneal dystrophy [RCV000299816] | Chr16:75476831 [GRCh38] Chr16:75510729 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4586T>C | single nucleotide variant | Macular corneal dystrophy [RCV000283489] | Chr16:75474055 [GRCh38] Chr16:75507953 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3742C>T | single nucleotide variant | Macular corneal dystrophy [RCV000284052] | Chr16:75474899 [GRCh38] Chr16:75508797 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1058G>A | single nucleotide variant | Macular corneal dystrophy [RCV000301338] | Chr16:75477583 [GRCh38] Chr16:75511481 [GRCh37] Chr16:16q23.1 |
benign|uncertain significance |
NM_021615.5(CHST6):c.*3815G>A | single nucleotide variant | Macular corneal dystrophy [RCV000266321] | Chr16:75474826 [GRCh38] Chr16:75508724 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.718C>A (p.Arg240Ser) | single nucleotide variant | Macular corneal dystrophy [RCV000267043] | Chr16:75479111 [GRCh38] Chr16:75513009 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2955C>T | single nucleotide variant | Macular corneal dystrophy [RCV000304329] | Chr16:75475686 [GRCh38] Chr16:75509584 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*2024C>G | single nucleotide variant | Macular corneal dystrophy [RCV000287771] | Chr16:75476617 [GRCh38] Chr16:75510515 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1374C>T | single nucleotide variant | Macular corneal dystrophy [RCV000289703] | Chr16:75477267 [GRCh38] Chr16:75511165 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1407C>G | single nucleotide variant | Macular corneal dystrophy [RCV000272133] | Chr16:75477234 [GRCh38] Chr16:75511132 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*712G>A | single nucleotide variant | Macular corneal dystrophy [RCV000272815] | Chr16:75477929 [GRCh38] Chr16:75511827 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3992T>C | single nucleotide variant | Macular corneal dystrophy [RCV000273216] | Chr16:75474649 [GRCh38] Chr16:75508547 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*5187T>G | single nucleotide variant | Macular corneal dystrophy [RCV000274686] | Chr16:75473454 [GRCh38] Chr16:75507352 [GRCh37] Chr16:16q23.1 |
benign|uncertain significance |
NM_021615.5(CHST6):c.258A>C (p.Ala86=) | single nucleotide variant | Macular corneal dystrophy [RCV000292878] | Chr16:75479571 [GRCh38] Chr16:75513469 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*2210C>G | single nucleotide variant | Macular corneal dystrophy [RCV000293439] | Chr16:75476431 [GRCh38] Chr16:75510329 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*2417C>T | single nucleotide variant | Macular corneal dystrophy [RCV000275736] | Chr16:75476224 [GRCh38] Chr16:75510122 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*5445G>A | single nucleotide variant | Macular corneal dystrophy [RCV000275809] | Chr16:75473196 [GRCh38] Chr16:75507094 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1597T>G | single nucleotide variant | Macular corneal dystrophy [RCV000259878] | Chr16:75477044 [GRCh38] Chr16:75510942 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*33G>C | single nucleotide variant | Macular corneal dystrophy [RCV000295708] | Chr16:75478608 [GRCh38] Chr16:75512506 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1526C>T | single nucleotide variant | Macular corneal dystrophy [RCV000277843] | Chr16:75477115 [GRCh38] Chr16:75511013 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3441A>T | single nucleotide variant | Macular corneal dystrophy [RCV000296385] | Chr16:75475200 [GRCh38] Chr16:75509098 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5465C>T | single nucleotide variant | Macular corneal dystrophy [RCV000296940] | Chr16:75473176 [GRCh38] Chr16:75507074 [GRCh37] Chr16:16q23.1 |
benign|uncertain significance |
NM_021615.5(CHST6):c.*3621A>G | single nucleotide variant | Macular corneal dystrophy [RCV000278920] | Chr16:75475020 [GRCh38] Chr16:75508918 [GRCh37] Chr16:16q23.1 |
benign|uncertain significance |
NM_021615.5(CHST6):c.*2503G>A | single nucleotide variant | Macular corneal dystrophy [RCV000263310] | Chr16:75476138 [GRCh38] Chr16:75510036 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4085C>T | single nucleotide variant | Macular corneal dystrophy [RCV000365513] | Chr16:75474556 [GRCh38] Chr16:75508454 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.987C>T (p.Val329=) | single nucleotide variant | Macular corneal dystrophy [RCV000365962] | Chr16:75478842 [GRCh38] Chr16:75512740 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*242T>C | single nucleotide variant | Macular corneal dystrophy [RCV000280938] | Chr16:75478399 [GRCh38] Chr16:75512297 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3078G>A | single nucleotide variant | Macular corneal dystrophy [RCV000366320] | Chr16:75475563 [GRCh38] Chr16:75509461 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5286A>T | single nucleotide variant | Macular corneal dystrophy [RCV000366953] | Chr16:75473355 [GRCh38] Chr16:75507253 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*4880G>A | single nucleotide variant | Macular corneal dystrophy [RCV000323367] | Chr16:75473761 [GRCh38] Chr16:75507659 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*1967C>T | single nucleotide variant | Macular corneal dystrophy [RCV000345069] | Chr16:75476674 [GRCh38] Chr16:75510572 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1295T>C | single nucleotide variant | Macular corneal dystrophy [RCV000283970] | Chr16:75477346 [GRCh38] Chr16:75511244 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4470C>T | single nucleotide variant | Macular corneal dystrophy [RCV000282309] | Chr16:75474171 [GRCh38] Chr16:75508069 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3811A>C | single nucleotide variant | Macular corneal dystrophy [RCV000323879] | Chr16:75474830 [GRCh38] Chr16:75508728 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*522G>C | single nucleotide variant | Macular corneal dystrophy [RCV000324151] | Chr16:75478119 [GRCh38] Chr16:75512017 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1566T>G | single nucleotide variant | Macular corneal dystrophy [RCV000370154] | Chr16:75477075 [GRCh38] Chr16:75510973 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1811G>A | single nucleotide variant | Macular corneal dystrophy [RCV000395231] | Chr16:75476830 [GRCh38] Chr16:75510728 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1919C>T | single nucleotide variant | Macular corneal dystrophy [RCV000395234] | Chr16:75476722 [GRCh38] Chr16:75510620 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*3223CT[1] | microsatellite | Macular corneal dystrophy [RCV000396947] | Chr16:75475415..75475416 [GRCh38] Chr16:75509313..75509314 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*3828A>T | single nucleotide variant | Macular corneal dystrophy [RCV000325969] | Chr16:75474813 [GRCh38] Chr16:75508711 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*3364C>A | single nucleotide variant | Macular corneal dystrophy [RCV000349028] | Chr16:75475277 [GRCh38] Chr16:75509175 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*972C>A | single nucleotide variant | Macular corneal dystrophy [RCV000371109] | Chr16:75477669 [GRCh38] Chr16:75511567 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1082T>C (p.Val361Ala) | single nucleotide variant | Macular corneal dystrophy [RCV000397063] | Chr16:75478747 [GRCh38] Chr16:75512645 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.918C>T (p.Ile306=) | single nucleotide variant | Macular corneal dystrophy [RCV000397048] | Chr16:75478911 [GRCh38] Chr16:75512809 [GRCh37] Chr16:16q23.1 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.*1058G>T | single nucleotide variant | Macular corneal dystrophy [RCV000397840] | Chr16:75477583 [GRCh38] Chr16:75511481 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4487C>T | single nucleotide variant | Macular corneal dystrophy [RCV000397870] | Chr16:75474154 [GRCh38] Chr16:75508052 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*4366T>C | single nucleotide variant | Macular corneal dystrophy [RCV000397873] | Chr16:75474275 [GRCh38] Chr16:75508173 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1914A>G | single nucleotide variant | Macular corneal dystrophy [RCV000305948] | Chr16:75476727 [GRCh38] Chr16:75510625 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.1030C>T (p.Arg344Cys) | single nucleotide variant | Macular corneal dystrophy [RCV000306656] | Chr16:75478799 [GRCh38] Chr16:75512697 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2956G>A | single nucleotide variant | Macular corneal dystrophy [RCV000399167] | Chr16:75475685 [GRCh38] Chr16:75509583 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.1181G>A (p.Arg394Gln) | single nucleotide variant | Macular corneal dystrophy [RCV000350676] | Chr16:75478648 [GRCh38] Chr16:75512546 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3643_*3644del | deletion | Macular corneal dystrophy [RCV000375076] | Chr16:75474997..75474998 [GRCh38] Chr16:75508895..75508896 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*242_*243insG | insertion | Macular corneal dystrophy [RCV000375415]|not provided [RCV001594952] | Chr16:75478398..75478399 [GRCh38] Chr16:75512296..75512297 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*4155C>T | single nucleotide variant | Macular corneal dystrophy [RCV000399352] | Chr16:75474486 [GRCh38] Chr16:75508384 [GRCh37] Chr16:16q23.1 |
benign|uncertain significance |
NM_021615.5(CHST6):c.*4373dup | duplication | Macular corneal dystrophy [RCV000334959] | Chr16:75474267..75474268 [GRCh38] Chr16:75508165..75508166 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1377G>A | single nucleotide variant | Macular corneal dystrophy [RCV000329559] | Chr16:75477264 [GRCh38] Chr16:75511162 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*1316A>C | single nucleotide variant | Macular corneal dystrophy [RCV000376071] | Chr16:75477325 [GRCh38] Chr16:75511223 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3750C>A | single nucleotide variant | Macular corneal dystrophy [RCV000376119] | Chr16:75474891 [GRCh38] Chr16:75508789 [GRCh37] Chr16:16q23.1 |
benign|uncertain significance |
NM_021615.5(CHST6):c.-66C>G | single nucleotide variant | Macular corneal dystrophy [RCV000344519] | Chr16:75481866 [GRCh38] Chr16:75515764 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3082G>A | single nucleotide variant | Macular corneal dystrophy [RCV000309162] | Chr16:75475559 [GRCh38] Chr16:75509457 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.666C>T (p.Asn222=) | single nucleotide variant | Macular corneal dystrophy [RCV000353686] | Chr16:75479163 [GRCh38] Chr16:75513061 [GRCh37] Chr16:16q23.1 |
benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.*139A>G | single nucleotide variant | Macular corneal dystrophy [RCV000403175] | Chr16:75478502 [GRCh38] Chr16:75512400 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4290A>C | single nucleotide variant | Macular corneal dystrophy [RCV000371356] | Chr16:75474351 [GRCh38] Chr16:75508249 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2902dup | duplication | Macular corneal dystrophy [RCV000264274] | Chr16:75475738..75475739 [GRCh38] Chr16:75509636..75509637 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*588T>G | single nucleotide variant | Macular corneal dystrophy [RCV000264350] | Chr16:75478053 [GRCh38] Chr16:75511951 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2327C>T | single nucleotide variant | Macular corneal dystrophy [RCV000333127] | Chr16:75476314 [GRCh38] Chr16:75510212 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*5441C>T | single nucleotide variant | Macular corneal dystrophy [RCV000333196] | Chr16:75473200 [GRCh38] Chr16:75507098 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*2652C>T | single nucleotide variant | Macular corneal dystrophy [RCV000355758] | Chr16:75475989 [GRCh38] Chr16:75509887 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4605C>T | single nucleotide variant | Macular corneal dystrophy [RCV000380271] | Chr16:75474036 [GRCh38] Chr16:75507934 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*488_*490del | deletion | Macular corneal dystrophy [RCV000378681] | Chr16:75478151..75478153 [GRCh38] Chr16:75512049..75512051 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.129G>A (p.Val43=) | single nucleotide variant | Macular corneal dystrophy [RCV000334104] | Chr16:75479700 [GRCh38] Chr16:75513598 [GRCh37] Chr16:16q23.1 |
benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.*1758A>T | single nucleotide variant | Macular corneal dystrophy [RCV000356973] | Chr16:75476883 [GRCh38] Chr16:75510781 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1375G>A | single nucleotide variant | Macular corneal dystrophy [RCV000381709] | Chr16:75477266 [GRCh38] Chr16:75511164 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.-78T>C | single nucleotide variant | Macular corneal dystrophy [RCV000405327] | Chr16:75481878 [GRCh38] Chr16:75515776 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.*4086G>A | single nucleotide variant | Macular corneal dystrophy [RCV000313212] | Chr16:75474555 [GRCh38] Chr16:75508453 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*3490T>C | single nucleotide variant | Macular corneal dystrophy [RCV000405978] | Chr16:75475151 [GRCh38] Chr16:75509049 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4305T>C | single nucleotide variant | Macular corneal dystrophy [RCV000314329] | Chr16:75474336 [GRCh38] Chr16:75508234 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1118A>G | single nucleotide variant | Macular corneal dystrophy [RCV000336744] | Chr16:75477523 [GRCh38] Chr16:75511421 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.*1047G>T | single nucleotide variant | Macular corneal dystrophy [RCV000337539] | Chr16:75477594 [GRCh38] Chr16:75511492 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*606G>A | single nucleotide variant | Macular corneal dystrophy [RCV000359353] | Chr16:75478035 [GRCh38] Chr16:75511933 [GRCh37] Chr16:16q23.1 |
benign|uncertain significance |
NM_021615.5(CHST6):c.*5150G>A | single nucleotide variant | Macular corneal dystrophy [RCV000384425] | Chr16:75473491 [GRCh38] Chr16:75507389 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2288T>G | single nucleotide variant | Macular corneal dystrophy [RCV000385397] | Chr16:75476353 [GRCh38] Chr16:75510251 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*377G>A | single nucleotide variant | Macular corneal dystrophy [RCV000316131] | Chr16:75478264 [GRCh38] Chr16:75512162 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.857C>T (p.Ala286Val) | single nucleotide variant | Macular corneal dystrophy [RCV000361725] | Chr16:75478972 [GRCh38] Chr16:75512870 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2947G>T | single nucleotide variant | Macular corneal dystrophy [RCV000361407] | Chr16:75475694 [GRCh38] Chr16:75509592 [GRCh37] Chr16:16q23.1 |
likely benign|uncertain significance |
NM_021615.5(CHST6):c.465G>A (p.Arg155=) | single nucleotide variant | Macular corneal dystrophy [RCV000387102] | Chr16:75479364 [GRCh38] Chr16:75513262 [GRCh37] Chr16:16q23.1 |
benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.976G>T (p.Ala326Ser) | single nucleotide variant | Macular corneal dystrophy [RCV001855182]|not provided [RCV000365634] | Chr16:75478853 [GRCh38] Chr16:75512751 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.708C>T (p.Asp236=) | single nucleotide variant | Macular corneal dystrophy [RCV000317606] | Chr16:75479121 [GRCh38] Chr16:75513019 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1892del | deletion | Macular corneal dystrophy [RCV000339678] | Chr16:75476749 [GRCh38] Chr16:75510647 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*751C>T | single nucleotide variant | Macular corneal dystrophy [RCV000362717] | Chr16:75477890 [GRCh38] Chr16:75511788 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3819G>C | single nucleotide variant | Macular corneal dystrophy [RCV000363334] | Chr16:75474822 [GRCh38] Chr16:75508720 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*1426C>A | single nucleotide variant | Macular corneal dystrophy [RCV000387301] | Chr16:75477215 [GRCh38] Chr16:75511113 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.120C>T (p.Arg40=) | single nucleotide variant | Macular corneal dystrophy [RCV000388573] | Chr16:75479709 [GRCh38] Chr16:75513607 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.*472G>C | single nucleotide variant | Macular corneal dystrophy [RCV000279584] | Chr16:75478169 [GRCh38] Chr16:75512067 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.484C>G (p.Arg162Gly) | single nucleotide variant | Macular corneal dystrophy [RCV000318543]|not provided [RCV001636903] | Chr16:75479345 [GRCh38] Chr16:75513243 [GRCh37] Chr16:16q23.1 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_021615.5(CHST6):c.*955C>T | single nucleotide variant | Macular corneal dystrophy [RCV000390266] | Chr16:75477686 [GRCh38] Chr16:75511584 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.-115C>G | single nucleotide variant | Macular corneal dystrophy [RCV000290791] | Chr16:75494963 [GRCh38] Chr16:75528861 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.892C>T (p.Gln298Ter) | single nucleotide variant | Macular corneal dystrophy [RCV000303034] | Chr16:75478937 [GRCh38] Chr16:75512835 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.*2836T>C | single nucleotide variant | Macular corneal dystrophy [RCV000302994] | Chr16:75475805 [GRCh38] Chr16:75509703 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1474C>G | single nucleotide variant | Macular corneal dystrophy [RCV000330534] | Chr16:75477167 [GRCh38] Chr16:75511065 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2080del | deletion | Macular corneal dystrophy [RCV000346062] | Chr16:75476561 [GRCh38] Chr16:75510459 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2437C>T | single nucleotide variant | Macular corneal dystrophy [RCV000316059] | Chr16:75476204 [GRCh38] Chr16:75510102 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3679T>C | single nucleotide variant | Macular corneal dystrophy [RCV000318125] | Chr16:75474962 [GRCh38] Chr16:75508860 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2055del | deletion | Macular corneal dystrophy [RCV000384326] | Chr16:75476586 [GRCh38] Chr16:75510484 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*241C>T | single nucleotide variant | Macular corneal dystrophy [RCV000349917] | Chr16:75478400 [GRCh38] Chr16:75512298 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3516T>C | single nucleotide variant | Macular corneal dystrophy [RCV000336273] | Chr16:75475125 [GRCh38] Chr16:75509023 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*794A>C | single nucleotide variant | Macular corneal dystrophy [RCV000308223] | Chr16:75477847 [GRCh38] Chr16:75511745 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5452G>C | single nucleotide variant | Macular corneal dystrophy [RCV000354191] | Chr16:75473189 [GRCh38] Chr16:75507087 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2433A>C | single nucleotide variant | Macular corneal dystrophy [RCV000373049] | Chr16:75476208 [GRCh38] Chr16:75510106 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1585G>T | single nucleotide variant | Macular corneal dystrophy [RCV000298708] | Chr16:75477056 [GRCh38] Chr16:75510954 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4497G>A | single nucleotide variant | Macular corneal dystrophy [RCV000340763] | Chr16:75474144 [GRCh38] Chr16:75508042 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.-154T>A | single nucleotide variant | Macular corneal dystrophy [RCV000341211] | Chr16:75495002 [GRCh38] Chr16:75528900 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4970T>C | single nucleotide variant | Macular corneal dystrophy [RCV000289429] | Chr16:75473671 [GRCh38] Chr16:75507569 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.-21C>A | single nucleotide variant | Macular corneal dystrophy [RCV000289481] | Chr16:75481821 [GRCh38] Chr16:75515719 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*984G>C | single nucleotide variant | Macular corneal dystrophy [RCV000311729] | Chr16:75477657 [GRCh38] Chr16:75511555 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5183G>A | single nucleotide variant | Macular corneal dystrophy [RCV000327485] | Chr16:75473458 [GRCh38] Chr16:75507356 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*687C>A | single nucleotide variant | Macular corneal dystrophy [RCV000327910] | Chr16:75477954 [GRCh38] Chr16:75511852 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1324C>T | single nucleotide variant | Macular corneal dystrophy [RCV000342463] | Chr16:75477317 [GRCh38] Chr16:75511215 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1031A>G | single nucleotide variant | Macular corneal dystrophy [RCV000397843] | Chr16:75477610 [GRCh38] Chr16:75511508 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5197C>T | single nucleotide variant | Macular corneal dystrophy [RCV001120953] | Chr16:75473444 [GRCh38] Chr16:75507342 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.*5011G>A | single nucleotide variant | Macular corneal dystrophy [RCV001120957] | Chr16:75473630 [GRCh38] Chr16:75507528 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.172C>T (p.Gln58Ter) | single nucleotide variant | not provided [RCV000598391] | Chr16:75479657 [GRCh38] Chr16:75513555 [GRCh37] Chr16:16q23.1 |
pathogenic |
GRCh37/hg19 16q11.2-24.3(chr16:46464488-90155062)x3 | copy number gain | See cases [RCV000446110] | Chr16:46464488..90155062 [GRCh37] Chr16:16q11.2-24.3 |
pathogenic |
GRCh37/hg19 16p13.3-q24.3(chr16:69193-90274381)x3 | copy number gain | See cases [RCV000446684] | Chr16:69193..90274381 [GRCh37] Chr16:16p13.3-q24.3 |
pathogenic |
GRCh37/hg19 16q23.1(chr16:74150909-77077326)x1 | copy number loss | See cases [RCV000512133] | Chr16:74150909..77077326 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh37/hg19 16p13.2-q24.3(chr16:9273328-89548493)x3 | copy number gain | See cases [RCV000511622] | Chr16:9273328..89548493 [GRCh37] Chr16:16p13.2-q24.3 |
uncertain significance |
GRCh37/hg19 16q11.2-24.3(chr16:46497599-90354753)x1 | copy number loss | Poly (ADP-Ribose) polymerase inhibitor response [RCV000626429] | Chr16:46497599..90354753 [GRCh37] Chr16:16q11.2-24.3 |
drug response |
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062) | copy number gain | See cases [RCV000511296] | Chr16:85881..90155062 [GRCh37] Chr16:16p13.3-q24.3 |
pathogenic |
GRCh37/hg19 16p13.3-q24.3(chr16:85881-90155062)x3 | copy number gain | See cases [RCV000512138] | Chr16:85881..90155062 [GRCh37] Chr16:16p13.3-q24.3 |
pathogenic |
GRCh37/hg19 16q13-24.3(chr16:57051473-89797669)x3 | copy number gain | See cases [RCV000512511] | Chr16:57051473..89797669 [GRCh37] Chr16:16q13-24.3 |
pathogenic |
GRCh37/hg19 16q11.2-24.3(chr16:46455960-90354753)x1 | copy number loss | Poly (ADP-Ribose) polymerase inhibitor response [RCV000626435] | Chr16:46455960..90354753 [GRCh37] Chr16:16q11.2-24.3 |
drug response |
GRCh37/hg19 16q22.2-24.3(chr16:72515938-90155062)x3 | copy number gain | not provided [RCV000683831] | Chr16:72515938..90155062 [GRCh37] Chr16:16q22.2-24.3 |
pathogenic |
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90274695)x3 | copy number gain | not provided [RCV000738918] | Chr16:88165..90274695 [GRCh37] Chr16:16p13.3-q24.3 |
pathogenic |
NM_021615.5(CHST6):c.847_848delinsTG (p.Glu283Ter) | indel | Macular corneal dystrophy [RCV001731224] | Chr16:75478981..75478982 [GRCh38] Chr16:75512879..75512880 [GRCh37] Chr16:16q23.1 |
pathogenic |
GRCh37/hg19 16p13.3-q24.3(chr16:61451-90294632)x3 | copy number gain | not provided [RCV000738915] | Chr16:61451..90294632 [GRCh37] Chr16:16p13.3-q24.3 |
pathogenic |
GRCh37/hg19 16p13.3-q24.3(chr16:88165-90163275)x3 | copy number gain | not provided [RCV000738917] | Chr16:88165..90163275 [GRCh37] Chr16:16p13.3-q24.3 |
pathogenic |
GRCh37/hg19 16q23.1(chr16:75428474-75729424)x3 | copy number gain | not provided [RCV000739215] | Chr16:75428474..75729424 [GRCh37] Chr16:16q23.1 |
benign |
GRCh37/hg19 16q23.1(chr16:75505046-75532044)x1 | copy number loss | not provided [RCV000739216] | Chr16:75505046..75532044 [GRCh37] Chr16:16q23.1 |
benign |
GRCh37/hg19 16q23.1(chr16:75527524-75532044)x1 | copy number loss | not provided [RCV000739217] | Chr16:75527524..75532044 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*2450C>G | single nucleotide variant | Macular corneal dystrophy [RCV001116252] | Chr16:75476191 [GRCh38] Chr16:75510089 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2426T>C | single nucleotide variant | Macular corneal dystrophy [RCV001116253] | Chr16:75476215 [GRCh38] Chr16:75510113 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.*4566A>G | single nucleotide variant | Macular corneal dystrophy [RCV001117482] | Chr16:75474075 [GRCh38] Chr16:75507973 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4460T>G | single nucleotide variant | Macular corneal dystrophy [RCV001117484] | Chr16:75474181 [GRCh38] Chr16:75508079 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4494G>C | single nucleotide variant | Macular corneal dystrophy [RCV001117483] | Chr16:75474147 [GRCh38] Chr16:75508045 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3656C>A | single nucleotide variant | Macular corneal dystrophy [RCV001117575] | Chr16:75474985 [GRCh38] Chr16:75508883 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.130C>T (p.Leu44=) | single nucleotide variant | Macular corneal dystrophy [RCV001121453]|not provided [RCV000966305] | Chr16:75479699 [GRCh38] Chr16:75513597 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
NM_021615.5(CHST6):c.392C>T (p.Ser131Leu) | single nucleotide variant | Macular corneal dystrophy [RCV000778477] | Chr16:75479437 [GRCh38] Chr16:75513335 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.196G>C (p.Val66Leu) | single nucleotide variant | Macular corneal dystrophy [RCV000778478] | Chr16:75479633 [GRCh38] Chr16:75513531 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.6G>A (p.Trp2Ter) | single nucleotide variant | Macular corneal dystrophy [RCV000778479] | Chr16:75479823 [GRCh38] Chr16:75513721 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.237C>T (p.Thr79=) | single nucleotide variant | Macular corneal dystrophy [RCV001121452]|not provided [RCV000966304] | Chr16:75479592 [GRCh38] Chr16:75513490 [GRCh37] Chr16:16q23.1 |
benign|likely benign |
GRCh37/hg19 16q23.1(chr16:75225021-75533658)x3 | copy number gain | not provided [RCV000848186] | Chr16:75225021..75533658 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3547C>T | single nucleotide variant | Macular corneal dystrophy [RCV001117578] | Chr16:75475094 [GRCh38] Chr16:75508992 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2050G>A | single nucleotide variant | Macular corneal dystrophy [RCV001117699] | Chr16:75476591 [GRCh38] Chr16:75510489 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*818G>A | single nucleotide variant | Macular corneal dystrophy [RCV001117800] | Chr16:75477823 [GRCh38] Chr16:75511721 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4589C>T | single nucleotide variant | Macular corneal dystrophy [RCV001116031] | Chr16:75474052 [GRCh38] Chr16:75507950 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2131C>T | single nucleotide variant | Macular corneal dystrophy [RCV001117698] | Chr16:75476510 [GRCh38] Chr16:75510408 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4291T>C | single nucleotide variant | Macular corneal dystrophy [RCV001119084] | Chr16:75474350 [GRCh38] Chr16:75508248 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4981C>T | single nucleotide variant | Macular corneal dystrophy [RCV001116028] | Chr16:75473660 [GRCh38] Chr16:75507558 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5208C>T | single nucleotide variant | Macular corneal dystrophy [RCV001118985] | Chr16:75473433 [GRCh38] Chr16:75507331 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1113C>G (p.Ala371=) | single nucleotide variant | Macular corneal dystrophy [RCV001116451] | Chr16:75478716 [GRCh38] Chr16:75512614 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.484C>A (p.Arg162=) | single nucleotide variant | Macular corneal dystrophy [RCV001119460] | Chr16:75479345 [GRCh38] Chr16:75513243 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.768C>T (p.Ala256=) | single nucleotide variant | Macular corneal dystrophy [RCV000958719] | Chr16:75479061 [GRCh38] Chr16:75512959 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*5182C>G | single nucleotide variant | Macular corneal dystrophy [RCV001120955] | Chr16:75473459 [GRCh38] Chr16:75507357 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5149C>T | single nucleotide variant | Macular corneal dystrophy [RCV001120956] | Chr16:75473492 [GRCh38] Chr16:75507390 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh37/hg19 16q23.1(chr16:75275780-75684031)x1 | copy number loss | not provided [RCV000846687] | Chr16:75275780..75684031 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2962G>A | single nucleotide variant | Macular corneal dystrophy [RCV001119181] | Chr16:75475679 [GRCh38] Chr16:75509577 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh37/hg19 16q22.2-23.1(chr16:72677179-77439111)x1 | copy number loss | not provided [RCV000847084] | Chr16:72677179..77439111 [GRCh37] Chr16:16q22.2-23.1 |
uncertain significance |
GRCh37/hg19 16q23.1(chr16:75513907-75626027)x3 | copy number gain | not provided [RCV000849205] | Chr16:75513907..75626027 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh37/hg19 16q23.1(chr16:75494923-75539525)x1 | copy number loss | not provided [RCV000849595] | Chr16:75494923..75539525 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1124T>G (p.Val375Gly) | single nucleotide variant | Macular corneal dystrophy [RCV001116450] | Chr16:75478705 [GRCh38] Chr16:75512603 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.573C>G (p.Pro191=) | single nucleotide variant | Macular corneal dystrophy [RCV001119457] | Chr16:75479256 [GRCh38] Chr16:75513154 [GRCh37] Chr16:16q23.1 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.-16-289TAAGAAGGTAGGACTCACAT[2] | microsatellite | not provided [RCV001676500] | Chr16:75480074..75480093 [GRCh38] Chr16:75513972..75513991 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.828G>A (p.Leu276=) | single nucleotide variant | Macular corneal dystrophy [RCV001117909]|not provided [RCV000881933] | Chr16:75479001 [GRCh38] Chr16:75512899 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*68G>T | single nucleotide variant | Macular corneal dystrophy [RCV001121368] | Chr16:75478573 [GRCh38] Chr16:75512471 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*13T>C | single nucleotide variant | Macular corneal dystrophy [RCV001121369] | Chr16:75478628 [GRCh38] Chr16:75512526 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1096G>A (p.Glu366Lys) | single nucleotide variant | Macular corneal dystrophy [RCV001207736] | Chr16:75478733 [GRCh38] Chr16:75512631 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4942C>T | single nucleotide variant | Macular corneal dystrophy [RCV001116029] | Chr16:75473699 [GRCh38] Chr16:75507597 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3814C>G | single nucleotide variant | Macular corneal dystrophy [RCV001116141] | Chr16:75474827 [GRCh38] Chr16:75508725 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*991A>G | single nucleotide variant | Macular corneal dystrophy [RCV001116350] | Chr16:75477650 [GRCh38] Chr16:75511548 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.621G>A (p.Val207=) | single nucleotide variant | Macular corneal dystrophy [RCV001422515]|not provided [RCV000936037] | Chr16:75479208 [GRCh38] Chr16:75513106 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.*5311T>C | single nucleotide variant | Macular corneal dystrophy [RCV001118984] | Chr16:75473330 [GRCh38] Chr16:75507228 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4444A>G | single nucleotide variant | Macular corneal dystrophy [RCV001119082] | Chr16:75474197 [GRCh38] Chr16:75508095 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4325A>G | single nucleotide variant | Macular corneal dystrophy [RCV001119083] | Chr16:75474316 [GRCh38] Chr16:75508214 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3240A>G | single nucleotide variant | Macular corneal dystrophy [RCV001119180] | Chr16:75475401 [GRCh38] Chr16:75509299 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3983G>A | single nucleotide variant | Macular corneal dystrophy [RCV001121047] | Chr16:75474658 [GRCh38] Chr16:75508556 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3947C>T | single nucleotide variant | Macular corneal dystrophy [RCV001121048] | Chr16:75474694 [GRCh38] Chr16:75508592 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*2770T>G | single nucleotide variant | Macular corneal dystrophy [RCV001121174] | Chr16:75475871 [GRCh38] Chr16:75509769 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.539A>G (p.Asn180Ser) | single nucleotide variant | Macular corneal dystrophy [RCV001119458] | Chr16:75479290 [GRCh38] Chr16:75513188 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*164G>T | single nucleotide variant | Macular corneal dystrophy [RCV001121366] | Chr16:75478477 [GRCh38] Chr16:75512375 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4003T>C | single nucleotide variant | Macular corneal dystrophy [RCV001121046] | Chr16:75474638 [GRCh38] Chr16:75508536 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*5190T>A | single nucleotide variant | Macular corneal dystrophy [RCV001120954] | Chr16:75473451 [GRCh38] Chr16:75507349 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.7C>A (p.Leu3Met) | single nucleotide variant | Macular corneal dystrophy [RCV001116563] | Chr16:75479822 [GRCh38] Chr16:75513720 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4574G>C | single nucleotide variant | Macular corneal dystrophy [RCV001117480] | Chr16:75474067 [GRCh38] Chr16:75507965 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*4573C>T | single nucleotide variant | Macular corneal dystrophy [RCV001117481] | Chr16:75474068 [GRCh38] Chr16:75507966 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*824G>A | single nucleotide variant | Macular corneal dystrophy [RCV001117799] | Chr16:75477817 [GRCh38] Chr16:75511715 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1A>T (p.Met1Leu) | single nucleotide variant | not provided [RCV001091758] | Chr16:75479828 [GRCh38] Chr16:75513726 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.*3465T>C | single nucleotide variant | Macular corneal dystrophy [RCV001119178] | Chr16:75475176 [GRCh38] Chr16:75509074 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*3297C>T | single nucleotide variant | Macular corneal dystrophy [RCV001119179] | Chr16:75475344 [GRCh38] Chr16:75509242 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*435C>T | single nucleotide variant | Macular corneal dystrophy [RCV001119365] | Chr16:75478206 [GRCh38] Chr16:75512104 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.496C>G (p.Arg166Gly) | single nucleotide variant | Macular corneal dystrophy [RCV001119459] | Chr16:75479333 [GRCh38] Chr16:75513231 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.301C>T (p.Leu101=) | single nucleotide variant | Macular corneal dystrophy [RCV001119461] | Chr16:75479528 [GRCh38] Chr16:75513426 [GRCh37] Chr16:16q23.1 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.*2833T>G | single nucleotide variant | Macular corneal dystrophy [RCV001121173] | Chr16:75475808 [GRCh38] Chr16:75509706 [GRCh37] Chr16:16q23.1 |
benign |
NM_021615.5(CHST6):c.*106G>T | single nucleotide variant | Macular corneal dystrophy [RCV001121367] | Chr16:75478535 [GRCh38] Chr16:75512433 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.115G>C (p.Ala39Pro) | single nucleotide variant | Macular corneal dystrophy [RCV001121454] | Chr16:75479714 [GRCh38] Chr16:75513612 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.24C>T (p.Ser8=) | single nucleotide variant | Macular corneal dystrophy [RCV001121455] | Chr16:75479805 [GRCh38] Chr16:75513703 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.15C>T (p.Arg5=) | single nucleotide variant | Macular corneal dystrophy [RCV001121456] | Chr16:75479814 [GRCh38] Chr16:75513712 [GRCh37] Chr16:16q23.1 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.*4749G>T | single nucleotide variant | Macular corneal dystrophy [RCV001116030] | Chr16:75473892 [GRCh38] Chr16:75507790 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1101G>A (p.Gln367=) | single nucleotide variant | Macular corneal dystrophy [RCV001116452] | Chr16:75478728 [GRCh38] Chr16:75512626 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh37/hg19 16q21-24.3(chr16:61524229-90155062)x3 | copy number gain | not provided [RCV001249359] | Chr16:61524229..90155062 [GRCh37] Chr16:16q21-24.3 |
not provided |
NM_021615.5(CHST6):c.*2635G>A | single nucleotide variant | Macular corneal dystrophy [RCV001121175] | Chr16:75476006 [GRCh38] Chr16:75509904 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.656C>T (p.Ala219Val) | single nucleotide variant | Macular corneal dystrophy [RCV001117910] | Chr16:75479173 [GRCh38] Chr16:75513071 [GRCh37] Chr16:16q23.1 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_021615.5(CHST6):c.*4238A>G | single nucleotide variant | Macular corneal dystrophy [RCV001119085] | Chr16:75474403 [GRCh38] Chr16:75508301 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1836G>A | single nucleotide variant | Macular corneal dystrophy [RCV001119264] | Chr16:75476805 [GRCh38] Chr16:75510703 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*1652G>A | single nucleotide variant | Macular corneal dystrophy [RCV001119265] | Chr16:75476989 [GRCh38] Chr16:75510887 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3608A>C | single nucleotide variant | Macular corneal dystrophy [RCV001117576] | Chr16:75475033 [GRCh38] Chr16:75508931 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3602C>T | single nucleotide variant | Macular corneal dystrophy [RCV001117577] | Chr16:75475039 [GRCh38] Chr16:75508937 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.*3917G>A | single nucleotide variant | Macular corneal dystrophy [RCV001121049] | Chr16:75474724 [GRCh38] Chr16:75508622 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.*3883T>G | single nucleotide variant | Macular corneal dystrophy [RCV001116140] | Chr16:75474758 [GRCh38] Chr16:75508656 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.231G>A (p.Trp77Ter) | single nucleotide variant | Macular corneal dystrophy [RCV001335098] | Chr16:75479598 [GRCh38] Chr16:75513496 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.1043T>G (p.Leu348Arg) | single nucleotide variant | Macular corneal dystrophy [RCV001348901] | Chr16:75478786 [GRCh38] Chr16:75512684 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh37/hg19 16q23.1(chr16:75281963-75665698)x3 | copy number gain | not provided [RCV001259871] | Chr16:75281963..75665698 [GRCh37] Chr16:16q23.1 |
uncertain significance |
GRCh37/hg19 16q23.1(chr16:75064591-75549654)x1 | copy number loss | not provided [RCV001258649] | Chr16:75064591..75549654 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.898G>T (p.Glu300Ter) | single nucleotide variant | Macular corneal dystrophy [RCV001335099] | Chr16:75478931 [GRCh38] Chr16:75512829 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.518T>C (p.Leu173Pro) | single nucleotide variant | Macular corneal dystrophy [RCV001367958] | Chr16:75479311 [GRCh38] Chr16:75513209 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.500C>T (p.Ser167Phe) | single nucleotide variant | Macular corneal dystrophy [RCV001298368] | Chr16:75479329 [GRCh38] Chr16:75513227 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.349del (p.Leu117fs) | deletion | Macular corneal dystrophy [RCV001331191] | Chr16:75479480 [GRCh38] Chr16:75513378 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.729C>T (p.Arg243=) | single nucleotide variant | Macular corneal dystrophy [RCV001309627] | Chr16:75479100 [GRCh38] Chr16:75512998 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.944G>A (p.Arg315His) | single nucleotide variant | Macular corneal dystrophy [RCV001371555] | Chr16:75478885 [GRCh38] Chr16:75512783 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.494_495delinsCT (p.Cys165Ser) | indel | Macular corneal dystrophy [RCV001331192]|not provided [RCV002225826] | Chr16:75479334..75479335 [GRCh38] Chr16:75513232..75513233 [GRCh37] Chr16:16q23.1 |
likely pathogenic|uncertain significance |
NM_021615.5(CHST6):c.1167C>T (p.Thr389=) | single nucleotide variant | Macular corneal dystrophy [RCV001456521] | Chr16:75478662 [GRCh38] Chr16:75512560 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.585A>G (p.Leu195=) | single nucleotide variant | Macular corneal dystrophy [RCV001445734] | Chr16:75479244 [GRCh38] Chr16:75513142 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.897C>G (p.Leu299=) | single nucleotide variant | Macular corneal dystrophy [RCV001460860] | Chr16:75478932 [GRCh38] Chr16:75512830 [GRCh37] Chr16:16q23.1 |
likely benign |
NM_021615.5(CHST6):c.789T>C (p.Phe263=) | single nucleotide variant | Macular corneal dystrophy [RCV001398804] | Chr16:75479040 [GRCh38] Chr16:75512938 [GRCh37] Chr16:16q23.1 |
likely benign |
NC_000016.9:g.(?_75428968)_(75690509_?)del | deletion | not provided [RCV002239772] | Chr16:75428968..75690509 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.997T>C (p.Trp333Arg) | single nucleotide variant | Macular corneal dystrophy [RCV001731225] | Chr16:75478832 [GRCh38] Chr16:75512730 [GRCh37] Chr16:16q23.1 |
likely pathogenic |
NM_021615.5(CHST6):c.211G>C (p.Glu71Gln) | single nucleotide variant | Macular corneal dystrophy [RCV001785426] | Chr16:75479618 [GRCh38] Chr16:75513516 [GRCh37] Chr16:16q23.1 |
likely pathogenic |
NM_021615.5(CHST6):c.799C>T (p.Arg267Cys) | single nucleotide variant | Macular corneal dystrophy [RCV002009424] | Chr16:75479030 [GRCh38] Chr16:75512928 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NC_000016.9:g.(?_74748068)_(75513746_?)del | deletion | Macular corneal dystrophy [RCV001949688] | Chr16:74748068..75513746 [GRCh37] Chr16:16q23.1 |
pathogenic |
NM_021615.5(CHST6):c.400G>A (p.Ala134Thr) | single nucleotide variant | Macular corneal dystrophy [RCV001894403] | Chr16:75479429 [GRCh38] Chr16:75513327 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.307G>A (p.Asp103Asn) | single nucleotide variant | Macular corneal dystrophy [RCV001942776] | Chr16:75479522 [GRCh38] Chr16:75513420 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.355G>C (p.Asp119His) | single nucleotide variant | Macular corneal dystrophy [RCV001963438] | Chr16:75479474 [GRCh38] Chr16:75513372 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.14G>C (p.Arg5Pro) | single nucleotide variant | Macular corneal dystrophy [RCV001918463] | Chr16:75479815 [GRCh38] Chr16:75513713 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1099C>G (p.Gln367Glu) | single nucleotide variant | Macular corneal dystrophy [RCV001993850] | Chr16:75478730 [GRCh38] Chr16:75512628 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NC_000016.9:g.(?_75490611)_(75576599_?)del | deletion | Joubert syndrome 20 [RCV001953926] | Chr16:75490611..75576599 [GRCh37] Chr16:16q23.1 |
pathogenic |
NC_000016.9:g.(?_75327850)_(75664426_?)dup | duplication | Joubert syndrome 20 [RCV001875411] | Chr16:75327850..75664426 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.532T>G (p.Phe178Val) | single nucleotide variant | Macular corneal dystrophy [RCV001922179] | Chr16:75479297 [GRCh38] Chr16:75513195 [GRCh37] Chr16:16q23.1 |
uncertain significance |
NM_021615.5(CHST6):c.1006G>A (p.Ala336Thr) | single nucleotide variant | Macular corneal dystrophy [RCV002096646] | Chr16:75478823 [GRCh38] Chr16:75512721 [GRCh37] Chr16:16q23.1 |
benign |
GRCh37/hg19 16q11.2-24.3(chr16:46503968-90155062)x3 | copy number gain | not provided [RCV002221458] | Chr16:46503968..90155062 [GRCh37] Chr16:16q11.2-24.3 |
pathogenic |
Database | Acc Id | Source(s) |
AGR Gene | HGNC:6938 | AgrOrtholog |
COSMIC | CHST6 | COSMIC |
Ensembl Genes | ENSG00000183196 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot |
Ensembl Protein | ENSP00000328983 | ENTREZGENE |
ENSP00000328983.4 | UniProtKB/Swiss-Prot | |
ENSP00000375079.2 | UniProtKB/Swiss-Prot | |
ENSP00000496806.1 | UniProtKB/Swiss-Prot | |
ENSP00000497635.1 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENST00000332272 | ENTREZGENE |
ENST00000332272.9 | UniProtKB/Swiss-Prot | |
ENST00000390664.3 | UniProtKB/Swiss-Prot | |
ENST00000649341.1 | UniProtKB/Swiss-Prot | |
ENST00000649824.1 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 3.40.50.300 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
GTEx | ENSG00000183196 | GTEx |
HGNC ID | HGNC:6938 | ENTREZGENE |
Human Proteome Map | CHST6 | Human Proteome Map |
InterPro | Carbohydrate_sulfotransferase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
P-loop_NTPase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Sulfotransferase_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | hsa:4166 | UniProtKB/Swiss-Prot |
NCBI Gene | 4166 | ENTREZGENE |
OMIM | 217800 | OMIM |
605294 | OMIM | |
Pfam | Sulfotransfer_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PharmGKB | PA26506 | PharmGKB |
PIRSF | Carbohydrate_sulfotransferase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF52540 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A1I9LHJ0_HUMAN | UniProtKB/TrEMBL |
A0A1I9LHJ1_HUMAN | UniProtKB/TrEMBL | |
A0A1I9LHJ2_HUMAN | UniProtKB/TrEMBL | |
CHST6_HUMAN | UniProtKB/Swiss-Prot | |
D6QZA0_HUMAN | UniProtKB/TrEMBL | |
D6QZA1_HUMAN | UniProtKB/TrEMBL | |
D6QZA2_HUMAN | UniProtKB/TrEMBL | |
L8E925_HUMAN | UniProtKB/TrEMBL | |
Q9GZX3 | ENTREZGENE | |
UniProt Secondary | D3DUK3 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2016-03-28 | CHST6 | carbohydrate sulfotransferase 6 | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 | Symbol and/or name change | 5135510 | APPROVED |