Olr1571 (olfactory receptor 1571) - Rat Genome Database

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Gene: Olr1571 (olfactory receptor 1571) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Olr1571
Name: olfactory receptor 1571
RGD ID: 1333684
Description: Predicted to enable olfactory receptor activity. Predicted to be involved in signal transduction. Predicted to be active in plasma membrane. Orthologous to human OR7A17 (olfactory receptor family 7 subfamily A member 17).
Type: protein-coding
Previously known as: olfactory receptor gene Olr1571; olfactory receptor, family 7, subfamily A, member 17; Or7a17; ratchr11-86418029-86418739_ORF
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Genome Annotation Status: not in current annotation release
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
RGSC_v3.41186,358,258 - 86,378,142 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11186,391,190 - 86,418,739 (+)NCBI
Celera1183,055,523 - 83,073,471 (+)NCBICelera
Cytogenetic Map11q23NCBI


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Gibbs RA, etal., Nature 2004 Apr 1;428(6982):493-521.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8380780   PMID:11014824  


Genomics

Markers in Region
29.MMHAP83FLB5.seq  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21184,323,402 - 84,323,618 (+)MAPPERmRatBN7.2
Rnor_6.01188,570,112 - 88,570,328NCBIRnor6.0
Rnor_5.01191,626,014 - 91,626,230UniSTSRnor5.0
RGSC_v3.41186,377,625 - 86,377,840UniSTSRGSC3.4
Celera1183,072,954 - 83,073,169UniSTS
Cytogenetic Map11q23UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001064915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_344047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: XM_001064915   ⟹   XP_001064915
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera1183,055,523 - 83,073,471 (+)RGD
RefSeq Acc Id: XM_344047
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
RGSC_v3.41186,358,258 - 86,378,142 (+)RGD
Protein Sequences
GenBank Protein P35899 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_001064915   ⟸   XM_001064915

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P35899-F1-model_v2 AlphaFold P35899 1-249 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1333684 AgrOrtholog
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot
  Olfact_rcpt UniProtKB/Swiss-Prot
NCBI Gene 363838 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/Swiss-Prot
  OLFACTORY RECEPTOR 7A17 UniProtKB/Swiss-Prot
Pfam 7tm_4 UniProtKB/Swiss-Prot
PhenoGen Olr1571 PhenoGen
PRINTS OLFACTORYR UniProtKB/Swiss-Prot
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot
UniProt O1571_RAT UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q9ERW9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Olr1571  olfactory receptor 1571   Olr1571_predicted  olfactory receptor 1571 (predicted)  'predicted' is removed 2292626 APPROVED
2005-07-13 Olr1571_predicted  olfactory receptor 1571 (predicted)  Or7a17_predicted  olfactory receptor, family 7, subfamily A, member 17 (predicted)  Data merged from RGD:1308883 737654 APPROVED
2005-02-04 Olr1571_predicted  olfactory receptor 1571 (predicted)      Symbol and Name status set to approved 70820 APPROVED
2005-01-12 Or7a17_predicted  olfactory receptor, family 7, subfamily A, member 17 (predicted)      Symbol and Name status set to approved 70820 APPROVED