Ints13 (integrator complex subunit 13) - Rat Genome Database

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Gene: Ints13 (integrator complex subunit 13) Mus musculus
Analyze
Symbol: Ints13
Name: integrator complex subunit 13
RGD ID: 1332382
MGI Page MGI
Description: Predicted to be involved in several processes, including centrosome localization; flagellated sperm motility; and regulation of fertilization. Predicted to act upstream of or within mitotic spindle organization and protein localization to nuclear envelope. Located in cytoplasm and nucleus. Is expressed in cerebral cortex subventricular zone and cerebral cortex ventricular layer. Orthologous to human INTS13 (integrator complex subunit 13).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 4933424B01Rik; A; Asun; asunder, spermatogenesis regulator; cell cycle regulator Mat89Bb homolog; likely orthologue of H. sapiens chromosome 12 open reading frame 11 (C12orf11); MGC28965; protein asunder homolog; RP23-158O11.1; Spa; Spata30; spermatogenesis associated 30; spermatogenesis-associated protein 30
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396146,446,253 - 146,479,333 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6146,451,130 - 146,479,333 (-)EnsemblGRCm39 Ensembl
GRCm386146,549,632 - 146,577,835 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6146,549,632 - 146,577,835 (-)EnsemblGRCm38mm10GRCm38
MGSCv376146,498,154 - 146,526,357 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366146,506,802 - 146,534,929 (-)NCBIMGSCv36mm8
Celera6149,592,491 - 149,630,272 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.7NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
Chloracne  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11125038   PMID:11217851   PMID:11544199   PMID:11812828   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273  
PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:23097494   PMID:23892456   PMID:23904267   PMID:26167872  
PMID:26584622   PMID:30418981   PMID:32554809   PMID:34321999  


Genomics

Comparative Map Data
Ints13
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396146,446,253 - 146,479,333 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6146,451,130 - 146,479,333 (-)EnsemblGRCm39 Ensembl
GRCm386146,549,632 - 146,577,835 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6146,549,632 - 146,577,835 (-)EnsemblGRCm38mm10GRCm38
MGSCv376146,498,154 - 146,526,357 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366146,506,802 - 146,534,929 (-)NCBIMGSCv36mm8
Celera6149,592,491 - 149,630,272 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map677.7NCBI
INTS13
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381226,905,181 - 26,938,332 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1226,905,181 - 26,938,326 (-)EnsemblGRCh38hg38GRCh38
GRCh371227,058,114 - 27,090,914 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361226,949,379 - 26,982,521 (-)NCBINCBI36Build 36hg18NCBI36
Build 341226,949,384 - 26,982,186NCBI
Celera1232,204,262 - 32,237,410 (-)NCBICelera
Cytogenetic Map12p11.23NCBI
HuRef1226,828,162 - 26,861,311 (-)NCBIHuRef
CHM1_11227,023,152 - 27,056,298 (-)NCBICHM1_1
T2T-CHM13v2.01226,777,183 - 26,810,389 (-)NCBIT2T-CHM13v2.0
Ints13
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84181,190,438 - 181,222,235 (-)NCBIGRCr8
mRatBN7.24179,459,740 - 179,491,541 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4179,459,740 - 179,491,541 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4185,745,425 - 185,777,043 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04181,529,950 - 181,561,568 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04180,150,367 - 180,181,986 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04180,854,988 - 180,887,095 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4180,855,800 - 180,887,050 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04245,014,695 - 245,046,802 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44184,121,971 - 184,152,890 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4167,956,851 - 167,988,083 (-)NCBICelera
Cytogenetic Map4q44NCBI
Ints13
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541321,780,397 - 21,812,727 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541321,779,417 - 21,813,804 (-)NCBIChiLan1.0ChiLan1.0
INTS13
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21069,875,722 - 69,909,153 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11269,872,161 - 69,907,118 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01259,373,002 - 59,406,131 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11261,986,872 - 62,020,021 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1261,986,877 - 62,020,015 (+)Ensemblpanpan1.1panPan2
INTS13
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12720,704,673 - 20,734,119 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2720,706,207 - 20,733,830 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2725,654,817 - 25,682,231 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02720,899,450 - 20,928,700 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2720,899,446 - 20,928,692 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12720,711,942 - 20,739,576 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02720,734,172 - 20,761,808 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02725,817,461 - 25,845,099 (-)NCBIUU_Cfam_GSD_1.0
Ints13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494582,615,893 - 82,649,851 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936548560,746 - 572,752 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
INTS13
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl546,824,150 - 46,860,553 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1546,823,746 - 46,860,552 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2550,376,013 - 50,404,425 (+)NCBISscrofa10.2Sscrofa10.2susScr3
INTS13
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11126,653,617 - 26,686,830 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1126,653,391 - 26,686,766 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660698,384,623 - 8,417,862 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ints13
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475212,258,949 - 12,290,295 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475212,257,427 - 12,291,269 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Ints13
1444 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:700
Count of miRNA genes:407
Interacting mature miRNAs:487
Transcripts:ENSMUST00000032427, ENSMUST00000126996, ENSMUST00000131662, ENSMUST00000132963, ENSMUST00000135277, ENSMUST00000139546, ENSMUST00000139979, ENSMUST00000152994
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
10449437Pas15_mpulmonary adenoma susceptibility 15 (mouse)6128180868149588044Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
1301084Bpq5_mblood pressure QTL 5 (mouse)Not determined6129330484149588044Mouse
14746990Manh61_mmandible shape 61 (mouse)6130156355149588044Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
10766452Sle23_msystematic lupus erythematosus susceptibility 23 (mouse)6128601582149588044Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
14746999Mancz6_mmandible centroid size 6 (mouse)6130156355149588044Mouse
1302089Wta2_mweight adult 2 (mouse)Not determined6125269523149588044Mouse
1301686Trmq1_mT cell ratio modifier QTL 1 (mouse)Not determined6129330484149588044Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
1301620Insq8_minsulin QTL 8 (mouse)Not determined6129534979149588044Mouse
10053680Lith25_mlithogenic gene 25 (mouse)Not determined6128601582149588044Mouse
4141974Skmw14_mskeletal muscle weight 14 (mouse)Not determined6129330484149588044Mouse
15092047Wsigrme2_mweek six growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
15092045Wngrme2_mweek nine growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301027Hdlq12_mHDL QTL 12 (mouse)Not determined6128601582149588044Mouse
15092052Wsegrme2_mweek seven growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
15092053Wegrme2_mweek eight growth rate, maternal effect 2 (mouse)6140445726147201498Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
1558959Eamcd2_mexperimental autoimmune myocarditis 2 (mouse)Not determined6129953954149588044Mouse
15092060Wfogrme1_mweek four growth rate, maternal effect 1 (mouse)6140497205147252976Mouse
15092061Wfigrme1_mweek five growth rate, maternal effect 1 (mouse)6140445726147201498Mouse
15092058Lgrme2_mlate growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
15092056Mgrme1_mmid growth rate, maternal effect 1 (mouse)6140497205147252976Mouse
4141633Idd6.3_minsulin dependent diabetes susceptibility 6.3 (mouse)Not determined146330484146954059Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse

Markers in Region
AA955382  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Celera6149,592,696 - 149,593,558UniSTS
Cytogenetic Map6G3UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001362106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_138757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_155292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004933623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC124128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK016882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE685943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI986549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY741532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD560819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF167981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF949591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK618181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CU210876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000032427   ⟹   ENSMUSP00000032427
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,451,130 - 146,479,333 (-)Ensembl
GRCm38.p6 Ensembl6146,549,632 - 146,577,835 (-)Ensembl
Ensembl Acc Id: ENSMUST00000126996
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,464,680 - 146,467,999 (-)Ensembl
GRCm38.p6 Ensembl6146,563,182 - 146,566,501 (-)Ensembl
Ensembl Acc Id: ENSMUST00000131662   ⟹   ENSMUSP00000118000
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,456,502 - 146,477,765 (-)Ensembl
GRCm38.p6 Ensembl6146,555,004 - 146,576,267 (-)Ensembl
Ensembl Acc Id: ENSMUST00000132963
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,455,580 - 146,456,310 (-)Ensembl
GRCm38.p6 Ensembl6146,554,082 - 146,554,812 (-)Ensembl
Ensembl Acc Id: ENSMUST00000135277
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,453,986 - 146,457,733 (-)Ensembl
GRCm38.p6 Ensembl6146,552,488 - 146,556,235 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139546
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,451,592 - 146,455,533 (-)Ensembl
GRCm38.p6 Ensembl6146,550,094 - 146,554,035 (-)Ensembl
Ensembl Acc Id: ENSMUST00000139979   ⟹   ENSMUSP00000122279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,451,130 - 146,456,133 (-)Ensembl
GRCm38.p6 Ensembl6146,549,632 - 146,554,635 (-)Ensembl
Ensembl Acc Id: ENSMUST00000152994
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,451,429 - 146,451,899 (-)Ensembl
GRCm38.p6 Ensembl6146,549,931 - 146,550,401 (-)Ensembl
Ensembl Acc Id: ENSMUST00000203545   ⟹   ENSMUSP00000145229
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,451,130 - 146,459,043 (-)Ensembl
GRCm38.p6 Ensembl6146,549,632 - 146,557,545 (-)Ensembl
Ensembl Acc Id: ENSMUST00000204234
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,451,139 - 146,452,878 (-)Ensembl
GRCm38.p6 Ensembl6146,549,641 - 146,551,380 (-)Ensembl
Ensembl Acc Id: ENSMUST00000205078
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6146,474,678 - 146,479,278 (-)Ensembl
GRCm38.p6 Ensembl6146,573,180 - 146,577,780 (-)Ensembl
RefSeq Acc Id: NM_001362106   ⟹   NP_001349035
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,451,130 - 146,479,333 (-)NCBI
GRCm386146,549,632 - 146,577,835 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362107   ⟹   NP_001349036
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,451,130 - 146,479,333 (-)NCBI
GRCm386146,549,632 - 146,577,835 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362108   ⟹   NP_001349037
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,451,130 - 146,479,333 (-)NCBI
GRCm386146,549,632 - 146,577,835 (-)NCBI
Sequence:
RefSeq Acc Id: NM_138757   ⟹   NP_620096
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,451,130 - 146,479,333 (-)NCBI
GRCm386146,549,632 - 146,577,835 (-)ENTREZGENE
MGSCv376146,498,154 - 146,526,357 (-)RGD
Celera6149,592,491 - 149,630,272 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_155292
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,451,130 - 146,479,333 (-)NCBI
GRCm386146,549,632 - 146,577,835 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255594   ⟹   XP_030111454
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,448,356 - 146,478,924 (-)NCBI
GRCm386146,549,632 - 146,577,311 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152306   ⟹   XP_036008199
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,446,253 - 146,479,290 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003956254
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,451,130 - 146,479,318 (-)NCBI
GRCm386146,549,751 - 146,577,820 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004933623
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396146,451,130 - 146,479,318 (-)NCBI
Sequence:
RefSeq Acc Id: NP_620096   ⟸   NM_138757
- Peptide Label: isoform 2
- UniProtKB: E9QLV7 (UniProtKB/Swiss-Prot),   Q99JT8 (UniProtKB/Swiss-Prot),   Q8QZV7 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001349037   ⟸   NM_001362108
- Peptide Label: isoform 4
RefSeq Acc Id: NP_001349035   ⟸   NM_001362106
- Peptide Label: isoform 1
RefSeq Acc Id: NP_001349036   ⟸   NM_001362107
- Peptide Label: isoform 3
RefSeq Acc Id: XP_030111454   ⟸   XM_030255594
- Peptide Label: isoform X1
- UniProtKB: Q8QZV7 (UniProtKB/Swiss-Prot),   E9QLV7 (UniProtKB/Swiss-Prot),   Q99JT8 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000122279   ⟸   ENSMUST00000139979
Ensembl Acc Id: ENSMUSP00000145229   ⟸   ENSMUST00000203545
Ensembl Acc Id: ENSMUSP00000032427   ⟸   ENSMUST00000032427
Ensembl Acc Id: ENSMUSP00000118000   ⟸   ENSMUST00000131662
RefSeq Acc Id: XP_036008199   ⟸   XM_036152306
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8QZV7-F1-model_v2 AlphaFold Q8QZV7 1-732 view protein structure

Promoters
RGD ID:6839884
Promoter ID:MM_KWN:48237
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000063271
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366146,504,396 - 146,504,896 (-)MPROMDB
RGD ID:6839305
Promoter ID:MM_KWN:48241
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000058245,   NM_138757,   OTTMUST00000063309,   OTTMUST00000063310,   OTTMUST00000063311
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366146,525,871 - 146,527,147 (+)MPROMDB
RGD ID:6891522
Promoter ID:EPDNEW_M9211
Type:multiple initiation site
Name:Ints13_1
Description:Mus musculus integrator complex subunit 13 , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386146,577,792 - 146,577,852EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1918427 AgrOrtholog
Ensembl Genes ENSMUSG00000040250 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032427 ENTREZGENE
  ENSMUST00000032427.15 UniProtKB/Swiss-Prot
  ENSMUST00000131662.2 UniProtKB/TrEMBL
  ENSMUST00000139979.8 UniProtKB/TrEMBL
  ENSMUST00000203545.3 UniProtKB/TrEMBL
InterPro Cell_cycle_regulator_Mat89Bb UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:71177 UniProtKB/Swiss-Prot
MGD MGI:1918427 ENTREZGENE
NCBI Gene 71177 ENTREZGENE
PANTHER INTEGRATOR COMPLEX SUBUNIT 13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12955 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF2151 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ints13 PhenoGen
UniProt A0A0N4SVS8_MOUSE UniProtKB/TrEMBL
  E9QLV7 ENTREZGENE
  F6W761_MOUSE UniProtKB/TrEMBL
  F7BP94_MOUSE UniProtKB/TrEMBL
  INT13_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q99JT8 ENTREZGENE
UniProt Secondary E9QLV7 UniProtKB/Swiss-Prot
  Q99JT8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-01-24 Ints13  integrator complex subunit 13  Asun  asunder, spermatogenesis regulator  Symbol and/or name change 5135510 APPROVED
2013-01-08 Asun  asunder, spermatogenesis regulator  Spata30  spermatogenesis associated 30  Symbol and/or name change 5135510 APPROVED
2012-10-30 Spata30  spermatogenesis associated 30  4933424B01Rik  RIKEN cDNA 4933424B01 gene  Symbol and/or name change 5135510 APPROVED