Kcnh6 (potassium voltage-gated channel, subfamily H (eag-related), member 6) - Rat Genome Database

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Gene: Kcnh6 (potassium voltage-gated channel, subfamily H (eag-related), member 6) Mus musculus
Analyze
Symbol: Kcnh6
Name: potassium voltage-gated channel, subfamily H (eag-related), member 6
RGD ID: 1332067
MGI Page MGI
Description: Predicted to enable inward rectifier potassium channel activity. Predicted to be involved in several processes, including potassium ion transmembrane transport; regulation of heart rate by cardiac conduction; and regulation of ventricular cardiac muscle cell membrane repolarization. Predicted to be active in plasma membrane. Is expressed in several structures, including gut; male reproductive gland or organ; nervous system; retina; and skin. Used to study glucose metabolism disease. Orthologous to human KCNH6 (potassium voltage-gated channel subfamily H member 6).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: m-erg; m-erg2; MGC129366; potassium voltage-gated channel subfamily H member 6
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911105,898,871 - 105,926,421 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11105,898,950 - 105,925,375 (+)EnsemblGRCm39 Ensembl
GRCm3811106,008,044 - 106,035,595 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,008,124 - 106,034,549 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711105,869,517 - 105,895,378 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611105,824,293 - 105,850,154 (+)NCBIMGSCv36mm8
Celera11117,739,753 - 117,760,293 (+)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1168.87NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:14643686   PMID:15695336   PMID:16141072   PMID:16141073   PMID:16985003   PMID:18799693   PMID:21677750  
PMID:21873635   PMID:24194600   PMID:27626380   PMID:30590050   PMID:31138815   PMID:32750722   PMID:32918525   PMID:34556670   PMID:36217412   PMID:36325440   PMID:38349432   PMID:38355793  
PMID:38363581  


Genomics

Comparative Map Data
Kcnh6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911105,898,871 - 105,926,421 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11105,898,950 - 105,925,375 (+)EnsemblGRCm39 Ensembl
GRCm3811106,008,044 - 106,035,595 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11106,008,124 - 106,034,549 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711105,869,517 - 105,895,378 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611105,824,293 - 105,850,154 (+)NCBIMGSCv36mm8
Celera11117,739,753 - 117,760,293 (+)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1168.87NCBI
KCNH6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381763,523,358 - 63,548,992 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1763,523,334 - 63,548,977 (+)EnsemblGRCh38hg38GRCh38
GRCh371761,600,719 - 61,626,353 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361758,954,427 - 58,980,070 (+)NCBINCBI36Build 36hg18NCBI36
Build 341758,954,426 - 58,980,070NCBI
Celera1755,988,522 - 56,014,428 (+)NCBICelera
Cytogenetic Map17q23.3NCBI
HuRef1756,966,852 - 56,992,787 (+)NCBIHuRef
CHM1_11761,664,820 - 61,690,751 (+)NCBICHM1_1
T2T-CHM13v2.01764,393,673 - 64,419,606 (+)NCBIT2T-CHM13v2.0
Kcnh6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81091,449,025 - 91,471,012 (+)NCBIGRCr8
mRatBN7.21090,949,240 - 90,970,746 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1090,949,846 - 90,970,701 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1096,003,974 - 96,025,091 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01095,467,143 - 95,488,263 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01090,878,334 - 90,899,206 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01094,207,336 - 94,228,236 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1094,207,314 - 94,228,236 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01093,958,627 - 93,979,152 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41095,400,862 - 95,421,678 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11095,421,300 - 95,436,048 (+)NCBI
Celera1089,628,057 - 89,648,511 (+)NCBICelera
Cytogenetic Map10q32.1NCBI
Kcnh6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554788,243,949 - 8,263,336 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554788,242,953 - 8,263,369 (-)NCBIChiLan1.0ChiLan1.0
KCNH6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21979,694,849 - 79,720,406 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11784,512,403 - 84,537,957 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01757,603,039 - 57,626,964 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11762,749,240 - 62,772,544 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1762,749,216 - 62,772,544 (+)Ensemblpanpan1.1panPan2
KCNH6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1911,538,506 - 11,559,303 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl911,538,205 - 11,559,319 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha912,498,958 - 12,519,775 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0913,201,806 - 13,222,832 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl913,201,609 - 13,222,833 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1912,146,396 - 12,167,428 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0915,364,422 - 15,385,338 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0915,367,399 - 15,388,227 (-)NCBIUU_Cfam_GSD_1.0
Kcnh6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560214,974,734 - 14,996,783 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365414,197,751 - 4,220,076 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365414,197,826 - 4,219,864 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNH6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1215,353,867 - 15,374,858 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11215,352,765 - 15,374,763 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21215,340,202 - 15,361,582 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNH6
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11657,733,032 - 57,759,292 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1657,735,861 - 57,758,421 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607728,349,032 - 28,372,393 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kcnh6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248491,043,045 - 1,062,891 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248491,043,045 - 1,063,371 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Kcnh6
573 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:822
Count of miRNA genes:435
Interacting mature miRNAs:518
Transcripts:ENSMUST00000001965, ENSMUST00000106903, ENSMUST00000140695, ENSMUST00000145539
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302034Pkccl_mprotein kinase C content in lungs (mouse)Not determined1191604608121973369Mouse
1301012Vispl_mvisual placing (mouse)Not determined11101022590121973369Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1301535Pas5b_mpulmonary adenoma susceptibility 5b (mouse)Not determined1196176465108806384Mouse
1300766Skull16_mskull morphology 16 (mouse)Not determined1181574481115574636Mouse
1301404Sbmd4_mspinal bone mineral density 4 (mouse)Not determined1172019649106019734Mouse
12910539Sstapa3_msuseptibility to Staphylococcus aureus infection 3 (mouse)1196897693110603991Mouse
4141612Cia40_mcollagen induced arthritis 40 (mouse)Not determined11103273992115021444Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
14747003Mancz9_mmandible centroid size 9 (mouse)1185844911119844911Mouse
1301640Lore4_mloss of righting induced by ethanol 4 (mouse)Not determined1179156009107616472Mouse
10412288Carg4_mCandida albicans resistance gene 4 (mouse)Not determined1181810267115810267Mouse
11251723Ewc5_methanol withdrawal and consumption 5 (mouse)1189869251121973369Mouse
10413882Moe1_mmodifier of epilepsy 1 (mouse)1177770978111771099Mouse
4141465Dbm2_mdiabetes modifier 2 (mouse)Not determined94437183118022724Mouse
10045617Heal26_mwound healing/regeneration 26 (mouse)Not determined1192939373112544554Mouse
10045616Heal25_mwound healing/regeneration 25 (mouse)Not determined1177437183111437322Mouse
1301310Tmevd5_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse)Not determined1172726125106726289Mouse
4142348Pstc2_mperiosteal circumference 2 (mouse)Not determined1172818615106818733Mouse
11341721Rvfs2_mRift Valley fever susceptibility 2 (mouse)11100254186120887165Mouse
1301414Heal10_mwound healing/regeneration 10 (mouse)Not determined1177437183111437322Mouse
1300649Crhq1_mcompensatory renal hypertrophy QTL 1 (mouse)Not determined1181574481115574636Mouse
27226789Feml16_mfemur length 16, 10 week (mouse)1187490826121873369Mouse
14746970Manh71_mmandible shape 71 (mouse)1179416257113416257Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
10043866Adip19_madiposity 19 (mouse)Not determined1172818615106818733Mouse
1301072Eae22_mexperimental allergic encephalomyelitis 22 (mouse)Not determined1182377698116377820Mouse
1300944Alcp20_malcohol preference locus 20 (mouse)Not determined1195403965121973369Mouse
4141939Pregq2_mpregnancy QTL 2 (mouse)Not determined1194063779118022724Mouse
1301983Berr2_mberghei resistance locus 2 (mouse)Not determined1198352609121973369Mouse
1300957Pbd1_mpeak bone density 1 (mouse)Not determined11102344123112384123Mouse
11038695Par8_mpulmonary adenoma resistance 8 (mouse)1177063779111063918Mouse
10043976Obq33_mobesity QTL 33 (mouse)Not determined1198500469121973369Mouse
1301057Nidd4_mnon-insulin-dependent diabetes mellitus 4 (mouse)Not determined1196810136121973369Mouse
1301958Alcp18_malcohol preference locus 18 (mouse)Not determined1195403965121973369Mouse
15014785Mvlq1_mmacrovesicular liver lesion QTL 1 (mouse)1186608320120608320Mouse
15039374Adip29_madiposity 29 (mouse)1186608320120608320Mouse
1300962Cd8mts4_mCD8 memory T cell subset 4 (mouse)Not determined1196137674121973369Mouse
1301095El6_mepilepsy 6 (mouse)Not determined1193229183121973369Mouse
27226731Tibmd4_mtibia midshaft diameter 4, 10 week (mouse)1194190826118890826Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
15039376Bw42_mbody weight QTL 42 (mouse)1186608320120608320Mouse
14700693Ppiq12_mprepulse inhibition QTL 12 (mouse)11101504820114472363Mouse
1558753Ath19_matherosclerosis 19 (mouse)Not determined1191604608121973369Mouse
14700694Ppiq13_mprepulse inhibition QTL 13 (mouse)11101504820114472363Mouse
14700695Ppiq14_mprepulse inhibition QTL 14 (mouse)11101504820114472363Mouse
10044001Alcw8_malcohol withdrawal 8 (mouse)Not determined1199254187121973369Mouse
14700696Ppiq15_mprepulse inhibition QTL 15 (mouse)11101504820114472363Mouse
11553867Stmm5_mskin tumor modifier of MSM 5 (mouse)11100058103121973369Mouse
10044007Hbnr14_mHeligmosomoides bakeri nematode resistance 14 (mouse)Not determined1187502600121502698Mouse

Markers in Region
D11Mit201  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3811106,033,620 - 106,033,812UniSTSGRCm38
MGSCv3711105,894,934 - 105,895,126UniSTSGRCm37
Celera11117,759,849 - 117,760,041UniSTS
Cytogenetic Map11E1UniSTS
cM Map1165.0UniSTS
Whitehead Genetic1165.6UniSTS
Whitehead_YAC11 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001037712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001779926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003949358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_388374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK038513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC109174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC109175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000001965   ⟹   ENSMUSP00000001965
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11105,898,999 - 105,925,375 (+)Ensembl
GRCm38.p6 Ensembl11106,008,173 - 106,034,549 (+)Ensembl
Ensembl Acc Id: ENSMUST00000106903   ⟹   ENSMUSP00000102516
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11105,898,950 - 105,924,933 (+)Ensembl
GRCm38.p6 Ensembl11106,008,124 - 106,034,107 (+)Ensembl
Ensembl Acc Id: ENSMUST00000140695
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11105,904,599 - 105,908,299 (+)Ensembl
GRCm38.p6 Ensembl11106,013,773 - 106,017,473 (+)Ensembl
Ensembl Acc Id: ENSMUST00000145539   ⟹   ENSMUSP00000137675
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl11105,899,029 - 105,924,890 (+)Ensembl
GRCm38.p6 Ensembl11106,008,203 - 106,034,064 (+)Ensembl
RefSeq Acc Id: NM_001037712   ⟹   NP_001032801
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,974 - 105,926,420 (+)NCBI
GRCm3811106,008,148 - 106,035,594 (+)NCBI
MGSCv3711105,869,517 - 105,895,378 (+)RGD
Celera11117,739,753 - 117,760,293 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532550   ⟹   XP_006532613
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,883 - 105,926,421 (+)NCBI
GRCm3811106,008,056 - 106,033,461 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006532551   ⟹   XP_006532614
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,904,490 - 105,926,421 (+)NCBI
GRCm3811106,013,661 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006532554   ⟹   XP_006532617
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,880 - 105,918,468 (+)NCBI
GRCm3811106,008,053 - 106,027,642 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245696   ⟹   XP_030101556
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,884 - 105,926,421 (+)NCBI
GRCm3811106,008,057 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001779926
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,883 - 105,926,421 (+)NCBI
GRCm3811106,008,056 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003949355
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,881 - 105,926,421 (+)NCBI
GRCm3811106,008,055 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003949357
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,874 - 105,926,421 (+)NCBI
GRCm3811106,008,047 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003949358
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,874 - 105,926,421 (+)NCBI
GRCm3811106,008,047 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936860
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,882 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936861
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,882 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936862
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,881 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936863
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,883 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936864
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,871 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936865
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,874 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936866
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,874 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004936867
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,874 - 105,926,421 (+)NCBI
Sequence:
RefSeq Acc Id: XR_388373
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,881 - 105,926,421 (+)NCBI
GRCm3811106,008,054 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: XR_388374
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3911105,898,874 - 105,926,421 (+)NCBI
GRCm3811106,008,047 - 106,035,595 (+)NCBI
Sequence:
RefSeq Acc Id: NP_001032801   ⟸   NM_001037712
- UniProtKB: Q32ME0 (UniProtKB/TrEMBL),   B1AR82 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532617   ⟸   XM_006532554
- Peptide Label: isoform X4
- UniProtKB: M0QW64 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532613   ⟸   XM_006532550
- Peptide Label: isoform X1
- UniProtKB: B1AR82 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532614   ⟸   XM_006532551
- Peptide Label: isoform X3
- UniProtKB: B1AR82 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030101556   ⟸   XM_030245696
- Peptide Label: isoform X2
- UniProtKB: B1AR82 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000137675   ⟸   ENSMUST00000145539
Ensembl Acc Id: ENSMUSP00000102516   ⟸   ENSMUST00000106903
Ensembl Acc Id: ENSMUSP00000001965   ⟸   ENSMUST00000001965
Protein Domains
Cyclic nucleotide-binding

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q32ME0-F1-model_v2 AlphaFold Q32ME0 1-950 view protein structure

Promoters
RGD ID:8677048
Promoter ID:EPDNEW_M16555
Type:multiple initiation site
Name:Kcnh6_1
Description:Mus musculus potassium voltage-gated channel, subfamily H (eag-related),member 6 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm3811106,008,148 - 106,008,208EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2684139 AgrOrtholog
Ensembl Genes ENSMUSG00000001901 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000001965 ENTREZGENE
  ENSMUST00000001965.14 UniProtKB/TrEMBL
  ENSMUST00000106903.8 UniProtKB/TrEMBL
  ENSMUST00000145539 ENTREZGENE
  ENSMUST00000145539.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.1200.260 UniProtKB/TrEMBL
  1.10.287.70 UniProtKB/TrEMBL
  2.60.120.10 UniProtKB/TrEMBL
  PAS domain UniProtKB/TrEMBL
InterPro cNMP-bd-like UniProtKB/TrEMBL
  cNMP-bd_dom UniProtKB/TrEMBL
  Ion_trans_dom UniProtKB/TrEMBL
  K_chnl_volt-dep_EAG/ELK/ERG UniProtKB/TrEMBL
  K_chnl_volt-dep_ERG UniProtKB/TrEMBL
  KCNH_channel UniProtKB/TrEMBL
  PAS UniProtKB/TrEMBL
  PAS-like_dom_sf UniProtKB/TrEMBL
  RmlC-like_jellyroll UniProtKB/TrEMBL
KEGG Report mmu:192775 UniProtKB/TrEMBL
MGD MGI:2684139 ENTREZGENE
NCBI Gene 192775 ENTREZGENE
PANTHER PTHR10217:SF468 UniProtKB/TrEMBL
  VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL UniProtKB/TrEMBL
Pfam cNMP_binding UniProtKB/TrEMBL
  Ion_trans UniProtKB/TrEMBL
  PAS_9 UniProtKB/TrEMBL
PhenoGen Kcnh6 PhenoGen
PRINTS EAGCHANLFMLY UniProtKB/TrEMBL
  ERGCHANNEL UniProtKB/TrEMBL
PROSITE CNMP_BINDING_3 UniProtKB/TrEMBL
SMART cNMP UniProtKB/TrEMBL
Superfamily-SCOP cNMP_binding UniProtKB/TrEMBL
  SSF55785 UniProtKB/TrEMBL
  Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt B1AR82 ENTREZGENE, UniProtKB/TrEMBL
  M0QW64 ENTREZGENE, UniProtKB/TrEMBL
  Q32ME0 ENTREZGENE, UniProtKB/TrEMBL
  Q8BYS2_MOUSE UniProtKB/TrEMBL