Cyp26b1 (cytochrome P450, family 26, subfamily b, polypeptide 1) - Rat Genome Database
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Gene: Cyp26b1 (cytochrome P450, family 26, subfamily b, polypeptide 1) Mus musculus
Analyze
Symbol: Cyp26b1
Name: cytochrome P450, family 26, subfamily b, polypeptide 1
RGD ID: 1332006
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; brain; genitourinary system; limb; and sensory organ. Orthologous to human CYP26B1 (cytochrome P450 family 26 subfamily B member 1); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: CP2; CP26; cytochrome P450 26B1; cytochrome P450 retinoic acid-inactivating 2; cytochrome P450, 26, retinoic acid B1; cytochrome P450RAI-2; P450R; P450RAI-2; retinoic acid B1; retinoic acid hydroxylase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39684,548,396 - 84,570,890 (-)NCBIGRCm39mm39
GRCm39 Ensembl684,548,396 - 84,570,890 (-)Ensembl
GRCm38684,571,414 - 84,593,908 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl684,571,414 - 84,593,908 (-)EnsemblGRCm38mm10GRCm38
MGSCv37684,521,408 - 84,543,902 (-)NCBIGRCm37mm9NCBIm37
MGSCv36684,537,602 - 84,559,404 (-)NCBImm8
Celera686,552,442 - 86,574,953 (-)NCBICelera
Cytogenetic Map6C3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-hydroxypropanoic acid  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP,ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (EXP,ISO)
all-trans-retinol  (ISO)
ammonium chloride  (ISO)
arecoline  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bexarotene  (EXP)
bisphenol A  (ISO)
bisphenol F  (EXP)
bromobenzene  (ISO)
C60 fullerene  (ISO)
cadmium atom  (EXP)
calcitriol  (ISO)
camptothecin  (ISO)
carbon nanotube  (EXP)
chloroprene  (ISO)
choline  (EXP)
cisplatin  (ISO)
cocaine  (ISO)
copper(II) sulfate  (ISO)
cyhalothrin  (ISO)
cyproconazole  (EXP)
dibenz[a,h]anthracene  (EXP)
diethyl maleate  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
fipronil  (ISO)
fluconazole  (EXP)
fluoxetine  (ISO)
flusilazole  (ISO)
folic acid  (EXP)
furan  (ISO)
genistein  (EXP)
hexaconazole  (EXP)
hexadecanoic acid  (ISO)
isoprenaline  (EXP)
isotretinoin  (ISO)
ketoconazole  (ISO)
kojic acid  (ISO)
L-methionine  (EXP)
leflunomide  (EXP)
lipopolysaccharide  (ISO)
manganese atom  (ISO)
manganese(0)  (ISO)
manganese(II) chloride  (ISO)
methoxychlor  (ISO)
N,N-diethyl-m-toluamide  (ISO)
nitrofen  (ISO)
oleic acid  (ISO)
oxaliplatin  (ISO)
paracetamol  (EXP)
paraquat  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phenylephrine  (ISO)
quercitrin  (ISO)
quinalphos  (EXP)
rac-lactic acid  (ISO)
raloxifene  (ISO)
resveratrol  (ISO)
silicon dioxide  (EXP,ISO)
Soman  (ISO)
streptozocin  (ISO)
sulforaphane  (EXP)
sunitinib  (ISO)
tamoxifen  (EXP,ISO)
titanium dioxide  (EXP,ISO)
toluene  (ISO)
topotecan  (ISO)
trichloroethene  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vinyl carbamate  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11520679   PMID:11744378   PMID:12466851   PMID:12477932   PMID:12617826   PMID:12915310   PMID:12930800  
PMID:14681479   PMID:15030763   PMID:15161092   PMID:15531370   PMID:15533830   PMID:15765518   PMID:15766748   PMID:15944188   PMID:16141072   PMID:16141073   PMID:16399080   PMID:16461896  
PMID:16554478   PMID:16574820   PMID:16602821   PMID:16615129   PMID:17047027   PMID:17067568   PMID:17126317   PMID:17270348   PMID:17332066   PMID:17435174   PMID:17584971   PMID:17715177  
PMID:18155190   PMID:18250098   PMID:18281459   PMID:18287559   PMID:18393306   PMID:18478160   PMID:18561907   PMID:18816858   PMID:18927155   PMID:18927157   PMID:19208226   PMID:19235731  
PMID:19273610   PMID:19429397   PMID:19538736   PMID:19605690   PMID:19618468   PMID:19838304   PMID:20034106   PMID:20043900   PMID:20106871   PMID:20230754   PMID:20707993   PMID:20833365  
PMID:20965161   PMID:21084447   PMID:21115610   PMID:21148184   PMID:21249211   PMID:21471156   PMID:21654186   PMID:21757499   PMID:21807937   PMID:21873635   PMID:21991325   PMID:22019272  
PMID:22071108   PMID:22214285   PMID:22366455   PMID:22387209   PMID:22496664   PMID:22869719   PMID:22972661   PMID:23007396   PMID:23034633   PMID:23300469   PMID:23536097   PMID:23553814  
PMID:23650387   PMID:23913823   PMID:23987514   PMID:23991089   PMID:24005908   PMID:24357327   PMID:24360120   PMID:24361262   PMID:24576537   PMID:24733397   PMID:24797530   PMID:24952961  
PMID:25102060   PMID:25142465   PMID:25305491   PMID:25344072   PMID:25406395   PMID:25725066   PMID:25753732   PMID:26040672   PMID:26446231   PMID:26674308   PMID:26892828   PMID:27100196  
PMID:27214556   PMID:27568519   PMID:28049658   PMID:28087565   PMID:28207192   PMID:28324176   PMID:28489004   PMID:28715412   PMID:28900034   PMID:29044428   PMID:29255003   PMID:29986869  
PMID:30067986   PMID:30166332   PMID:30185873   PMID:30212841   PMID:30254164   PMID:30285093   PMID:30868103   PMID:30991836   PMID:31072004   PMID:31084574   PMID:31167781   PMID:31562240  
PMID:31755607   PMID:31896743   PMID:32001436   PMID:32385093   PMID:32452519   PMID:32665247   PMID:33298461  


Genomics

Comparative Map Data
Cyp26b1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39684,548,396 - 84,570,890 (-)NCBIGRCm39mm39
GRCm39 Ensembl684,548,396 - 84,570,890 (-)Ensembl
GRCm38684,571,414 - 84,593,908 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl684,571,414 - 84,593,908 (-)EnsemblGRCm38mm10GRCm38
MGSCv37684,521,408 - 84,543,902 (-)NCBIGRCm37mm9NCBIm37
MGSCv36684,537,602 - 84,559,404 (-)NCBImm8
Celera686,552,442 - 86,574,953 (-)NCBICelera
Cytogenetic Map6C3NCBI
CYP26B1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl272,129,238 - 72,148,038 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl272,129,238 - 72,147,862 (-)EnsemblGRCh38hg38GRCh38
GRCh38272,129,238 - 72,147,862 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37272,356,367 - 72,374,991 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36272,209,875 - 72,228,471 (-)NCBINCBI36hg18NCBI36
Build 34272,268,021 - 72,286,618NCBI
Celera272,206,377 - 72,224,974 (-)NCBI
Cytogenetic Map2p13.2NCBI
HuRef272,092,551 - 72,111,176 (-)NCBIHuRef
CHM1_1272,285,791 - 72,304,416 (-)NCBICHM1_1
Cyp26b1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24117,041,808 - 117,058,628 (-)NCBI
Rnor_6.0 Ensembl4116,261,796 - 116,278,615 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04116,261,796 - 116,278,615 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04180,848,037 - 180,865,444 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44118,734,786 - 118,751,606 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14118,979,266 - 118,996,087 (-)NCBI
Celera4106,028,365 - 106,045,185 (-)NCBICelera
Cytogenetic Map4q34NCBI
LOC102023166
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542413,336,189 - 13,355,423 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542413,336,189 - 13,355,368 (+)NCBIChiLan1.0ChiLan1.0
CYP26B1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A73,667,847 - 73,686,433 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A73,670,830 - 73,686,433 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A72,172,658 - 72,191,410 (-)NCBIMhudiblu_PPA_v0panPan3
CYP26B1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl1750,633,413 - 50,653,894 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.11750,633,397 - 50,653,882 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
LOC101975674
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493649116,010,394 - 16,028,852 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CYP26B1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl370,572,197 - 70,593,408 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1370,573,551 - 70,593,416 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2373,914,357 - 73,934,214 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CYP26B1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11435,030,011 - 35,057,164 (+)NCBI
ChlSab1.1 Ensembl1435,038,654 - 35,057,176 (+)Ensembl
LOC101714280
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247621,455,828 - 1,474,201 (+)NCBI

Position Markers
Cyp26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37684,522,596 - 84,522,740UniSTSGRCm37
MGSCv37684,534,260 - 84,534,375UniSTSGRCm37
Celera686,553,630 - 86,553,774UniSTS
Celera686,565,295 - 86,565,410UniSTS
Cytogenetic Map6C3UniSTS
cM Map6 UniSTS
cM MapUN UniSTS
BF398420  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38684,572,546 - 84,572,746UniSTSGRCm38
MGSCv37684,522,540 - 84,522,740UniSTSGRCm37
Celera686,553,574 - 86,553,774UniSTS
Cytogenetic Map6C3UniSTS
D4Got92  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38684,586,584 - 84,586,722UniSTSGRCm38
MGSCv37684,536,578 - 84,536,716UniSTSGRCm37
Celera686,567,617 - 86,567,755UniSTS
Cytogenetic Map6C3UniSTS
Cyp26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C3UniSTS
Cyp26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38684,584,266 - 84,584,381UniSTSGRCm38
MGSCv37684,534,260 - 84,534,375UniSTSGRCm37
Celera686,565,295 - 86,565,410UniSTS
Cytogenetic Map6C3UniSTS
Cyp26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C3UniSTS
Cyp26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C3UniSTS
Cyp26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38684,572,602 - 84,572,746UniSTSGRCm38
MGSCv37684,522,596 - 84,522,740UniSTSGRCm37
Celera686,553,630 - 86,553,774UniSTS
Cytogenetic Map6C3UniSTS
cM MapUN UniSTS
cM Map6 UniSTS
Cyp26b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6C3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
10412195Efw_mepididymal fat weight (mouse)Not determined67554435694225955Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1558984Cplaq9_mcircadian period of locomotor activity 9 (mouse)Not determined63866962592607450Mouse
13824985Alh1_mamplitude of lateral head displacement 1 (mouse)67800000097000000Mouse
1301571Arrd1_mage-related retinal degeneration 1 (mouse)Not determined67554435692607450Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
10043972Obq28_mobesity QTL 28 (mouse)Not determined65854043392540433Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
4141990Etax6_methanol induced ataxia 6 (mouse)Not determined7132262186275719Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396656149Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396656149Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300618Pgia19_mproteoglycan induced arthritis 19 (mouse)Not determined64531405987426034Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
14697704Stsl4_mSalmonella typhimurium susceptibility locus 4 (mouse)67710000090000000Mouse
1302020Bbaa20_mB.burgdorferi-associated arthritis 20 (mouse)Not determined67132262193464093Mouse
1301740Bwq2_mbody weight QTL 2 (mouse)Not determined66005768094057799Mouse
15039373Adip28_madiposity 28 (mouse)65630821190308211Mouse
15039375Bw41_mbody weight QTL 41 (mouse)65630821190308211Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
4141028Mclr_mmethylcholanthrene lymphoma resistance (mouse)Not determined5437342788379171Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396656149Mouse
1300674Nidd3n_mnon-insulin-dependent diabetes mellitus 3 in NSY (mouse)Not determined67554435694225955Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487426034Mouse
1558977Skmw10_mskeletal muscle weight 10 (mouse)Not determined65844758392447710Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396656149Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301254Skts11_mskin tumor susceptibility 11 (mouse)Not determined65117915085179300Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2156
Count of miRNA genes:589
Interacting mature miRNAs:693
Transcripts:ENSMUST00000077705, ENSMUST00000168003
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000077705   ⟹   ENSMUSP00000076886
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl684,571,944 - 84,593,746 (-)Ensembl
RefSeq Acc Id: ENSMUST00000168003   ⟹   ENSMUSP00000128391
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl684,571,944 - 84,593,908 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204109   ⟹   ENSMUSP00000144998
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl684,574,241 - 84,588,005 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204146   ⟹   ENSMUSP00000145092
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl684,571,944 - 84,588,638 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205228   ⟹   ENSMUSP00000144836
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl684,571,414 - 84,587,680 (-)Ensembl
RefSeq Acc Id: NM_001177713   ⟹   NP_001171184
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39684,548,396 - 84,570,890 (-)NCBI
GRCm38684,571,414 - 84,593,908 (-)ENTREZGENE
MGSCv37684,521,408 - 84,543,902 (-)RGD
Celera686,552,442 - 86,574,953 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_175475   ⟹   NP_780684
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39684,548,396 - 84,570,792 (-)NCBI
GRCm38684,571,414 - 84,593,810 (-)NCBI
MGSCv37684,521,408 - 84,543,902 (-)RGD
Celera686,552,442 - 86,574,953 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006505972   ⟹   XP_006506035
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39684,548,405 - 84,563,890 (-)NCBI
GRCm38684,571,423 - 84,586,908 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011241300   ⟹   XP_011239602
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39684,548,405 - 84,564,693 (-)NCBI
GRCm38684,571,423 - 84,587,720 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255338   ⟹   XP_030111198
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39684,548,405 - 84,569,807 (-)NCBI
GRCm38684,571,423 - 84,592,827 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036166047   ⟹   XP_036021940
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39684,548,405 - 84,569,807 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_780684   ⟸   NM_175475
- UniProtKB: Q811W2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001171184   ⟸   NM_001177713
- UniProtKB: Q811W2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506035   ⟸   XM_006505972
- Peptide Label: isoform X2
- UniProtKB: A0A0N4SUV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011239602   ⟸   XM_011241300
- Peptide Label: isoform X2
- UniProtKB: A0A0N4SUV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030111198   ⟸   XM_030255338
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000144998   ⟸   ENSMUST00000204109
RefSeq Acc Id: ENSMUSP00000145092   ⟸   ENSMUST00000204146
RefSeq Acc Id: ENSMUSP00000144836   ⟸   ENSMUST00000205228
RefSeq Acc Id: ENSMUSP00000128391   ⟸   ENSMUST00000168003
RefSeq Acc Id: ENSMUSP00000076886   ⟸   ENSMUST00000077705
RefSeq Acc Id: XP_036021940   ⟸   XM_036166047
- Peptide Label: isoform X1

Promoters
RGD ID:6890202
Promoter ID:EPDNEW_M8552
Type:initiation region
Name:Cyp26b1_1
Description:Mus musculus cytochrome P450, family 26, subfamily b, polypeptide1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8553  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38684,588,638 - 84,588,698EPDNEW
RGD ID:6890204
Promoter ID:EPDNEW_M8553
Type:multiple initiation site
Name:Cyp26b1_2
Description:Mus musculus cytochrome P450, family 26, subfamily b, polypeptide1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8552  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38684,588,972 - 84,589,032EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2176159 AgrOrtholog
Ensembl Genes ENSMUSG00000063415 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000076886 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000128391 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000144836 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000144998 UniProtKB/TrEMBL
  ENSMUSP00000145092 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000077705 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000168003 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000204109 UniProtKB/TrEMBL
  ENSMUST00000204146 UniProtKB/Swiss-Prot
  ENSMUST00000205228 UniProtKB/TrEMBL
Gene3D-CATH 1.10.630.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cyt_P450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_P450_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_P450_E_grp-IV UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_P450_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:232174 UniProtKB/Swiss-Prot
MGD MGI:2176159 ENTREZGENE
NCBI Gene 232174 ENTREZGENE
Pfam p450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cyp26b1 PhenoGen
PRINTS EP450IV UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE CYTOCHROME_P450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48264 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SUV4 ENTREZGENE, UniProtKB/TrEMBL
  A0A0N4SV88_MOUSE UniProtKB/TrEMBL
  CP26B_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q3TM12 UniProtKB/Swiss-Prot