Frmd4b (FERM domain containing 4B) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Frmd4b (FERM domain containing 4B) Mus musculus
Analyze
Symbol: Frmd4b
Name: FERM domain containing 4B
RGD ID: 1331954
MGI Page MGI
Description: Orthologous to human FRMD4B (FERM domain containing 4B); INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 6030440G05Rik; C87375; FERM domain-containing protein 4B; GOBLIN; golgi-associated band 4.1-like protein; GR; GRP1 binding protein GRSP1; GRP1-binding protein GRSP1; GRSP1; mKIAA1013; R74720
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39697,263,828 - 97,594,618 (-)NCBIGRCm39mm39
GRCm39 Ensembl697,263,828 - 97,594,502 (-)Ensembl
GRCm38697,286,867 - 97,617,657 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl697,286,867 - 97,617,541 (-)EnsemblGRCm38mm10GRCm38
MGSCv37697,236,861 - 97,567,651 (-)NCBIGRCm37mm9NCBIm37
MGSCv36697,252,330 - 97,583,044 (-)NCBImm8
Celera699,148,219 - 99,479,337 (-)NCBICelera
Cytogenetic Map6D3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:7671812   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11445584   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14621295  
PMID:14691545   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16944949   PMID:18799693   PMID:20080746   PMID:21677750   PMID:21873635   PMID:29947801  


Genomics

Comparative Map Data
Frmd4b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39697,263,828 - 97,594,618 (-)NCBIGRCm39mm39
GRCm39 Ensembl697,263,828 - 97,594,502 (-)Ensembl
GRCm38697,286,867 - 97,617,657 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl697,286,867 - 97,617,541 (-)EnsemblGRCm38mm10GRCm38
MGSCv37697,236,861 - 97,567,651 (-)NCBIGRCm37mm9NCBIm37
MGSCv36697,252,330 - 97,583,044 (-)NCBImm8
Celera699,148,219 - 99,479,337 (-)NCBICelera
Cytogenetic Map6D3NCBI
FRMD4B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl369,168,782 - 69,542,583 (-)EnsemblGRCh38hg38GRCh38
GRCh38369,168,782 - 69,541,340 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37369,217,933 - 69,435,239 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36369,301,836 - 69,518,120 (-)NCBINCBI36hg18NCBI36
Build 34369,302,666 - 69,332,399NCBI
Celera369,147,274 - 69,362,951 (-)NCBI
Cytogenetic Map3p14.1NCBI
HuRef369,220,047 - 69,435,240 (-)NCBIHuRef
CHM1_1369,169,160 - 69,386,688 (-)NCBICHM1_1
Frmd4b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24129,895,401 - 130,222,070 (-)NCBI
Rnor_6.0 Ensembl4129,658,840 - 129,846,642 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04129,658,137 - 129,984,735 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04194,157,499 - 194,480,974 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44132,012,943 - 132,207,644 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14132,278,240 - 132,323,694 (-)NCBI
Celera4118,771,260 - 119,095,704 (-)NCBICelera
Cytogenetic Map4q34NCBI
Frmd4b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542118,483,857 - 18,673,519 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542118,423,238 - 18,669,514 (+)NCBIChiLan1.0ChiLan1.0
FRMD4B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1370,471,897 - 70,842,474 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl370,471,897 - 70,686,895 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0369,105,231 - 69,478,192 (-)NCBIMhudiblu_PPA_v0panPan3
FRMD4B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2022,402,128 - 22,598,594 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12022,253,619 - 22,574,917 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Frmd4b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366031,369,943 - 1,485,645 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FRMD4B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1350,541,410 - 50,806,260 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11350,602,910 - 50,980,236 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21355,735,642 - 56,114,900 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FRMD4B
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12230,196,103 - 30,554,140 (-)NCBI
ChlSab1.1 Ensembl2230,195,908 - 30,452,885 (-)Ensembl
Frmd4b
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247733,763,706 - 3,961,465 (-)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
1301369Im4_mimmunoregulatory 4 (mouse)Not determined66348473897484905Mouse
1300650Bw18_mbody weight QTL 18 (mouse)Not determined666713869100714031Mouse
1301876Bits2_mbitterness sensitivity 2 (mouse)Not determined670425898104426034Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670425898104426034Mouse
1301034Egrm2_mearly growth rate (mouse)Not determined670425898104426034Mouse
1300869Stheal5_msoft tissue heal 5 (mouse)Not determined671575060105575178Mouse
1300954Fcsa1_mfemoral cross-sectional area 1 (mouse)Not determined671981024105981170Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671981024105981170Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1301320Ots1_movarian teratoma susceptibility 1 (mouse)Not determined675447583104503555Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
14696731Pairq1_mP. aeruginosa infection resistance QTL 1 (mouse)681500000102200000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
11532719Sluc45_msusceptibility to lung cancer 45 (mouse)69260730698258933Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2151
Count of miRNA genes:793
Interacting mature miRNAs:1032
Transcripts:ENSMUST00000032146, ENSMUST00000113353, ENSMUST00000113355, ENSMUST00000113359, ENSMUST00000124050, ENSMUST00000126899, ENSMUST00000135077, ENSMUST00000138301, ENSMUST00000142589, ENSMUST00000143698, ENSMUST00000146191, ENSMUST00000152385, ENSMUST00000155326
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001346639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB042027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC122031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC130828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC155725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF327856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF327857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC058262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN693106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000032146   ⟹   ENSMUSP00000032146
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,288,360 - 97,487,805 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113353
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,324,316 - 97,487,803 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113355   ⟹   ENSMUSP00000108982
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,286,867 - 97,617,541 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113359   ⟹   ENSMUSP00000108986
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,287,088 - 97,459,286 (-)Ensembl
RefSeq Acc Id: ENSMUST00000124050   ⟹   ENSMUSP00000145240
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,396,257 - 97,431,429 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126899
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,395,789 - 97,396,704 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138301
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,308,710 - 97,354,177 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142589
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,350,933 - 97,617,529 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143698
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,287,082 - 97,312,380 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146191
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,307,213 - 97,312,430 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152385
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,323,658 - 97,396,736 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155326
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,308,137 - 97,324,140 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203486
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl697,287,032 - 97,291,261 (-)Ensembl
RefSeq Acc Id: NM_001346637   ⟹   NP_001333566
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,464,781 (-)NCBI
GRCm38697,286,867 - 97,487,820 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001346639   ⟹   NP_001333568
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,436,247 (-)NCBI
GRCm38697,286,867 - 97,459,286 (-)NCBI
Sequence:
RefSeq Acc Id: NM_145148   ⟹   NP_660130
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,594,618 (-)NCBI
GRCm38697,286,867 - 97,617,657 (-)ENTREZGENE
MGSCv37697,236,861 - 97,567,651 (-)RGD
Celera699,148,219 - 99,479,337 (-)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006506006   ⟹   XP_006506069
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,289,336 (-)NCBI
GRCm38697,286,867 - 97,312,375 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321537   ⟹   XP_017177026
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,408,415 (-)NCBI
GRCm38697,286,867 - 97,431,454 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321538   ⟹   XP_017177027
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,373,692 (-)NCBI
GRCm38697,286,867 - 97,396,731 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321539   ⟹   XP_017177028
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,289,366 (-)NCBI
GRCm38697,286,867 - 97,312,345 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255350   ⟹   XP_030111210
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39697,263,828 - 97,555,129 (-)NCBI
GRCm38697,286,867 - 97,578,168 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_660130   ⟸   NM_145148
- Peptide Label: isoform 3
- UniProtKB: Q920B0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006506069   ⟸   XM_006506006
- Peptide Label: isoform X3
- UniProtKB: Q8C0E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177026   ⟸   XM_017321537
- Peptide Label: isoform X1
- UniProtKB: Q920B0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017177027   ⟸   XM_017321538
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017177028   ⟸   XM_017321539
- Peptide Label: isoform X3
- UniProtKB: Q8C0E8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030111210   ⟸   XM_030255350
- Peptide Label: isoform X1
RefSeq Acc Id: NP_001333566   ⟸   NM_001346637
- Peptide Label: isoform 1
- UniProtKB: Q920B0 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001333568   ⟸   NM_001346639
- Peptide Label: isoform 2
- UniProtKB: Q920B0 (UniProtKB/Swiss-Prot),   Q6ZQ04 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000032146   ⟸   ENSMUST00000032146
RefSeq Acc Id: ENSMUSP00000145240   ⟸   ENSMUST00000124050
RefSeq Acc Id: ENSMUSP00000108982   ⟸   ENSMUST00000113355
RefSeq Acc Id: ENSMUSP00000108986   ⟸   ENSMUST00000113359
Protein Domains
CUPID   FERM

Promoters
RGD ID:6839319
Promoter ID:MM_KWN:47007
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung
Transcripts:OTTMUST00000055841
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,258,864 - 97,259,364 (-)MPROMDB
RGD ID:6839314
Promoter ID:MM_KWN:47008
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000055835,   OTTMUST00000055836,   UC009DAT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,261,711 - 97,262,211 (-)MPROMDB
RGD ID:6839316
Promoter ID:MM_KWN:47010
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Liver
Transcripts:OTTMUST00000055839
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,304,021 - 97,304,521 (-)MPROMDB
RGD ID:6890522
Promoter ID:EPDNEW_M8712
Type:multiple initiation site
Name:Frmd4b_3
Description:Mus musculus FERM domain containing 4B , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8713  EPDNEW_M8714  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38697,312,281 - 97,312,341EPDNEW
RGD ID:6839315
Promoter ID:MM_KWN:47012
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung
Transcripts:OTTMUST00000055837
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,381,219 - 97,381,719 (-)MPROMDB
RGD ID:6839321
Promoter ID:MM_KWN:47013
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Lung
Transcripts:UC009DAU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,408,951 - 97,409,451 (-)MPROMDB
RGD ID:6890524
Promoter ID:EPDNEW_M8713
Type:initiation region
Name:Frmd4b_1
Description:Mus musculus FERM domain containing 4B , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8712  EPDNEW_M8714  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38697,431,416 - 97,431,476EPDNEW
RGD ID:6839313
Promoter ID:MM_KWN:47014
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:ENSMUST00000113353,   UC009DAV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,437,541 - 97,438,041 (-)MPROMDB
RGD ID:6890526
Promoter ID:EPDNEW_M8714
Type:initiation region
Name:Frmd4b_2
Description:Mus musculus FERM domain containing 4B , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8712  EPDNEW_M8713  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38697,459,271 - 97,459,331EPDNEW
RGD ID:6839335
Promoter ID:MM_KWN:47017
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:NM_145148,   UC009DAX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36697,567,254 - 97,567,754 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2141794 AgrOrtholog
Ensembl Genes ENSMUSG00000030064 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032146 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000108982 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000108986 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000145240 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032146 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113355 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113359 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000124050 UniProtKB/TrEMBL
  ENSMUST00000143698 ENTREZGENE
Gene3D-CATH 1.20.80.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Band_41_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DUF3338 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_central UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FRMD4A/B_FERM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:232288 UniProtKB/Swiss-Prot
MGD MGI:2141794 ENTREZGENE
NCBI Gene 232288 ENTREZGENE
Pfam DUF3338 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_M UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Frmd4b PhenoGen
PRINTS BAND41 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FERM_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART B41 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47031 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SVT9_MOUSE UniProtKB/TrEMBL
  FRM4B_MOUSE UniProtKB/Swiss-Prot
  Q6PE61_MOUSE UniProtKB/TrEMBL
  Q6ZQ04 ENTREZGENE, UniProtKB/TrEMBL
  Q8C0E8 ENTREZGENE, UniProtKB/TrEMBL
  Q8K0I1_MOUSE UniProtKB/TrEMBL
  Q920B0 ENTREZGENE
UniProt Secondary Q3V1S1 UniProtKB/Swiss-Prot
  Q920B1 UniProtKB/Swiss-Prot
  Q9ESP9 UniProtKB/Swiss-Prot