Scoc (short coiled-coil protein) - Rat Genome Database
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Gene: Scoc (short coiled-coil protein) Mus musculus
Analyze
Symbol: Scoc
Name: short coiled-coil protein
RGD ID: 1323538
MGI Page MGI
Description: Predicted to be involved in positive regulation of macroautophagy and regulation of protein complex stability. Predicted to colocalize with endosome and trans-Golgi network. Is expressed in ganglia. Orthologous to human SCOC (short coiled-coil protein); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 0610011C06Rik; 2810002J11Rik; AA415030; SCOCO; short coiled coil protein SCOCO
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm7335  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,161,121 - 84,185,055 (-)NCBIGRCm39mm39
GRCm38883,434,492 - 83,458,436 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,430,084 - 83,458,391 (-)EnsemblGRCm38mm10GRCm38
MGSCv37885,958,392 - 85,982,290 (-)NCBIGRCm37mm9NCBIm37
MGSCv36886,324,600 - 86,348,454 (-)NCBImm8
Celera887,727,992 - 87,750,160 (-)NCBICelera
Cytogenetic Map8C2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
1. RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16602821   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:32325033  


Genomics

Comparative Map Data
Scoc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,161,121 - 84,185,055 (-)NCBIGRCm39mm39
GRCm38883,434,492 - 83,458,436 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,430,084 - 83,458,391 (-)EnsemblGRCm38mm10GRCm38
MGSCv37885,958,392 - 85,982,290 (-)NCBIGRCm37mm9NCBIm37
MGSCv36886,324,600 - 86,348,454 (-)NCBImm8
Celera887,727,992 - 87,750,160 (-)NCBICelera
Cytogenetic Map8C2NCBI
SCOC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4140,257,286 - 140,385,726 (+)EnsemblGRCh38hg38GRCh38
GRCh384140,257,308 - 140,385,728 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh374141,178,440 - 141,303,710 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364141,397,890 - 141,523,154 (+)NCBINCBI36hg18NCBI36
Build 344141,536,044 - 141,661,309NCBI
Celera4138,508,468 - 138,633,708 (+)NCBI
Cytogenetic Map4q31.1NCBI
HuRef4136,908,314 - 137,034,355 (+)NCBIHuRef
CHM1_14141,155,714 - 141,281,064 (+)NCBICHM1_1
Scoc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01924,584,435 - 24,614,167 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,584,455 - 24,614,019 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,562,896 - 35,592,598 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,351,894 - 26,396,488 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11926,356,719 - 26,401,313 (+)NCBI
Celera1924,199,454 - 24,230,524 (+)NCBICelera
Cytogenetic Map19q11NCBI
Scoc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554283,404,326 - 3,435,759 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554283,404,372 - 3,435,653 (-)NCBIChiLan1.0ChiLan1.0
SCOC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14144,038,551 - 144,055,397 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4144,015,642 - 144,055,397 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04132,740,601 - 132,749,658 (+)NCBIMhudiblu_PPA_v0panPan3
SCOC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl192,452,707 - 2,494,034 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1192,451,678 - 2,494,052 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Scoc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365357,403,767 - 7,412,903 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SCOC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl886,679,840 - 86,719,164 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1886,680,782 - 86,690,691 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2892,172,592 - 92,182,503 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SCOC
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1787,326,672 - 87,336,034 (+)NCBI
Scoc
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462500615,912 - 23,559 (+)NCBI

Position Markers
RH124374  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381737,712,169 - 37,712,282UniSTSGRCm38
GRCm38883,434,525 - 83,434,638UniSTSGRCm38
MGSCv371737,849,114 - 37,849,227UniSTSGRCm37
MGSCv37885,958,424 - 85,958,537UniSTSGRCm37
Celera1741,154,029 - 41,154,142UniSTS
Celera887,728,024 - 87,728,137UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map8C2UniSTS
px-31d4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5B2UniSTS
Cytogenetic MapXC1UniSTS
Cytogenetic Map8C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map4C3UniSTS
cM Map520.0UniSTS
cM Map439.4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88006677589014359Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881092664115092664Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)881619151115619151Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:915
Count of miRNA genes:326
Interacting mature miRNAs:403
Transcripts:ENSMUST00000081506, ENSMUST00000167525
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001039137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001285992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_019708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006531205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC155304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF115778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK076085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK207171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU042937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW012698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC085265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC108407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC147069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY251609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX241959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000081506   ⟹   ENSMUSP00000080221
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,434,495 - 83,458,349 (-)Ensembl
RefSeq Acc Id: ENSMUST00000167525   ⟹   ENSMUSP00000128210
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,434,516 - 83,442,507 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212031   ⟹   ENSMUSP00000148647
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,435,872 - 83,442,505 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212449   ⟹   ENSMUSP00000148829
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,430,510 - 83,442,450 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212473
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,430,084 - 83,442,501 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212500   ⟹   ENSMUSP00000148753
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,437,554 - 83,439,244 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212849
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,437,753 - 83,458,391 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212871
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,436,248 - 83,442,495 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212905   ⟹   ENSMUSP00000148577
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,435,470 - 83,438,246 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212947
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,435,719 - 83,437,827 (-)Ensembl
RefSeq Acc Id: NM_001039137   ⟹   NP_001034226
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,161,121 - 84,185,025 (-)NCBI
GRCm38883,434,492 - 83,458,396 (-)NCBI
MGSCv37885,958,392 - 85,982,290 (-)RGD
Celera887,727,992 - 87,750,165 (-)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001285992   ⟹   NP_001272921
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,161,121 - 84,169,291 (-)NCBI
GRCm38883,434,492 - 83,442,662 (-)NCBI
Celera887,727,992 - 87,750,165 (-)NCBI
Sequence:
RefSeq Acc Id: NM_019708   ⟹   NP_062682
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,161,121 - 84,169,291 (-)NCBI
GRCm38883,434,492 - 83,442,662 (-)NCBI
MGSCv37885,958,392 - 85,982,290 (-)RGD
Celera887,727,992 - 87,750,165 (-)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006531204   ⟹   XP_006531267
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,161,123 - 84,166,161 (-)NCBI
GRCm38883,434,494 - 83,439,537 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006531205   ⟹   XP_006531268
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,161,123 - 84,166,167 (-)NCBI
GRCm38883,434,494 - 83,439,538 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011248448   ⟹   XP_011246750
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,161,123 - 84,185,055 (-)NCBI
GRCm38883,434,494 - 83,458,436 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001034226   ⟸   NM_001039137
- Peptide Label: isoform a
- UniProtKB: Q78YZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_062682   ⟸   NM_019708
- Peptide Label: isoform b
- UniProtKB: Q78YZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001272921   ⟸   NM_001285992
- Peptide Label: isoform c
- UniProtKB: Q78YZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531268   ⟸   XM_006531205
- Peptide Label: isoform X3
- UniProtKB: Q78YZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006531267   ⟸   XM_006531204
- Peptide Label: isoform X2
- UniProtKB: Q78YZ6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246750   ⟸   XM_011248448
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000080221   ⟸   ENSMUST00000081506
RefSeq Acc Id: ENSMUSP00000148577   ⟸   ENSMUST00000212905
RefSeq Acc Id: ENSMUSP00000128210   ⟸   ENSMUST00000167525
RefSeq Acc Id: ENSMUSP00000148753   ⟸   ENSMUST00000212500
RefSeq Acc Id: ENSMUSP00000148647   ⟸   ENSMUST00000212031
RefSeq Acc Id: ENSMUSP00000148829   ⟸   ENSMUST00000212449

Promoters
RGD ID:8667599
Promoter ID:EPDNEW_M11831
Type:initiation region
Name:Scoc_1
Description:Mus musculus short coiled-coil protein , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11832  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38883,442,495 - 83,442,555EPDNEW
RGD ID:8667601
Promoter ID:EPDNEW_M11832
Type:initiation region
Name:Scoc_2
Description:Mus musculus short coiled-coil protein , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11831  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38883,458,359 - 83,458,419EPDNEW
RGD ID:6843697
Promoter ID:MM_KWN:55001
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_019708,   UC009MKG.1,   UC009MKI.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36885,966,254 - 85,966,754 (-)MPROMDB
RGD ID:6843695
Promoter ID:MM_KWN:55002
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:NM_001039137
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36885,982,126 - 85,982,626 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1927654 AgrOrtholog
Ensembl Genes ENSMUSG00000063253 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000080221 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000128210 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000148577 UniProtKB/Swiss-Prot
  ENSMUSP00000148647 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000148753 UniProtKB/TrEMBL
  ENSMUSP00000148829 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000081506 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000167525 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000212031 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000212449 UniProtKB/TrEMBL
  ENSMUST00000212500 UniProtKB/TrEMBL
  ENSMUST00000212905 UniProtKB/Swiss-Prot
InterPro SCOC UniProtKB/Swiss-Prot
KEGG Report mmu:56367 UniProtKB/Swiss-Prot
MGD MGI:1927654 ENTREZGENE
NCBI Gene 56367 ENTREZGENE
PANTHER PTHR21614 UniProtKB/Swiss-Prot
Pfam DUF2205 UniProtKB/Swiss-Prot
PhenoGen Scoc PhenoGen
UniGene Mm.246911 ENTREZGENE
UniProt A0A1D5RMF2_MOUSE UniProtKB/TrEMBL
  A0A1D5RML7_MOUSE UniProtKB/TrEMBL
  Q78YZ6 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary B2RV68 UniProtKB/Swiss-Prot
  Q32NY7 UniProtKB/Swiss-Prot
  Q3TJC8 UniProtKB/Swiss-Prot
  Q58E48 UniProtKB/Swiss-Prot
  Q5U450 UniProtKB/Swiss-Prot
  Q9WU55 UniProtKB/Swiss-Prot