Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: PRDM1 (PR/SET domain 1) Homo sapiens
Symbol: PRDM1
Name: PR/SET domain 1
Description: Exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II proximal promoter sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Localizes to the cytoplasm.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: B-lymphocyte-induced maturation protein 1; beta-interferon gene positive regulatory domain I-binding factor; beta-interferon gene positive-regulatory domain I binding factor; BLIMP-1; BLIMP1; MGC118922; MGC118923; MGC118924; MGC118925; positive regulatory domain I-binding factor 1; PR domain 1; PR domain containing 1, with ZNF domain; PR domain zinc finger protein 1; PR domain-containing protein 1; PR-domain zinc finger protein 1; PRDI-BF1; PRDI-binding factor 1; PRDI-binding factor-1
Mus musculus (house mouse) : Prdm1 (PR domain containing 1, with ZNF domain)  MGI  Alliance
Rattus norvegicus (Norway rat) : Prdm1 (PR/SET domain 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prdm1 (PR/SET domain 1)
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM1 (PR/SET domain 1)
Canis lupus familiaris (dog) : PRDM1 (PR/SET domain 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prdm1 (PR/SET domain 1)
Sus scrofa (pig) : PRDM1 (PR/SET domain 1)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38 Ensembl6105,993,463 - 106,109,939 (+)Ensembl
GRCh386106,046,729 - 106,109,938 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh376106,534,195 - 106,557,814 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366106,640,888 - 106,664,506 (+)NCBINCBI36hg18NCBI36
Build 346106,653,507 - 106,664,502NCBI
Celera6107,155,767 - 107,179,390 (+)NCBI
Cytogenetic Map6q21NCBI
HuRef6103,981,166 - 104,004,788 (+)NCBIHuRef
CHM1_16106,796,630 - 106,820,250 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
More on PRDM1
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1323391
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2020-01-21
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.