Dnah9 (dynein, axonemal, heavy chain 9) - Rat Genome Database

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Gene: Dnah9 (dynein, axonemal, heavy chain 9) Mus musculus
Analyze
Symbol: Dnah9
Name: dynein, axonemal, heavy chain 9
RGD ID: 1322974
MGI Page MGI
Description: Predicted to enable dynein intermediate chain binding activity; dynein light intermediate chain binding activity; and minus-end-directed microtubule motor activity. Acts upstream of or within cerebrospinal fluid circulation; establishment of localization in cell; and mucociliary clearance. Located in 9+2 motile cilium and distal portion of axoneme. Part of outer dynein arm. Is expressed in central nervous system and testis. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 40. Orthologous to human DNAH9 (dynein axonemal heavy chain 9).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9030022M04; A230091C01; C230051G16; D11Ertd686; D11Ertd686e; Dnah; Dnahc9; dynein axonemal heavy chain 9; dynein heavy chain 9, axonemal; dynein, axonemal, heavy polypeptide 9; KIAA0357; mKIAA0357
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm11360  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391165,722,150 - 66,059,379 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1165,722,108 - 66,059,377 (-)EnsemblGRCm39 Ensembl
GRCm381165,831,324 - 66,168,581 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1165,831,282 - 66,168,551 (-)EnsemblGRCm38mm10GRCm38
MGSCv371165,644,826 - 65,982,053 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361165,647,519 - 65,984,746 (-)NCBIMGSCv36mm8
Celera1172,766,026 - 73,104,526 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1140.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:15306728   PMID:15750039   PMID:15845866   PMID:16141072   PMID:16141073  
PMID:21267068   PMID:21873635   PMID:23525783   PMID:24421334   PMID:27353389   PMID:30104731   PMID:31884020   PMID:32317081   PMID:33347437   PMID:35050399   PMID:35729109   PMID:35942101  
PMID:37890489  


Genomics

Comparative Map Data
Dnah9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391165,722,150 - 66,059,379 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1165,722,108 - 66,059,377 (-)EnsemblGRCm39 Ensembl
GRCm381165,831,324 - 66,168,581 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1165,831,282 - 66,168,551 (-)EnsemblGRCm38mm10GRCm38
MGSCv371165,644,826 - 65,982,053 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361165,647,519 - 65,984,746 (-)NCBIMGSCv36mm8
Celera1172,766,026 - 73,104,526 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1140.53NCBI
DNAH9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381711,598,470 - 11,969,748 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1711,598,470 - 11,969,748 (+)EnsemblGRCh38hg38GRCh38
GRCh371711,501,787 - 11,873,065 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361711,442,473 - 11,813,790 (+)NCBINCBI36Build 36hg18NCBI36
Celera1711,532,499 - 11,903,633 (+)NCBICelera
Cytogenetic Map17p12NCBI
HuRef1711,403,416 - 11,773,976 (+)NCBIHuRef
CHM1_11711,510,987 - 11,882,195 (+)NCBICHM1_1
T2T-CHM13v2.01711,506,869 - 11,877,746 (+)NCBIT2T-CHM13v2.0
Dnah9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81050,996,796 - 51,363,977 (-)NCBIGRCr8
mRatBN7.21050,496,174 - 50,864,909 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1050,497,688 - 50,864,949 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.01052,351,226 - 52,711,289 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1052,351,192 - 52,710,862 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01052,101,007 - 52,465,444 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41052,704,651 - 52,857,689 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11052,718,277 - 52,726,147 (-)NCBI
Celera1049,698,523 - 50,053,917 (-)NCBICelera
Cytogenetic Map10q24NCBI
Dnah9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554675,357,500 - 5,677,755 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554675,357,500 - 5,677,144 (-)NCBIChiLan1.0ChiLan1.0
DNAH9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21961,765,429 - 62,146,388 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11766,572,134 - 66,953,255 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01739,673,338 - 40,047,090 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11744,422,857 - 44,796,983 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1744,422,928 - 44,796,983 (-)Ensemblpanpan1.1panPan2
DNAH9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1535,730,394 - 36,060,154 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl535,730,394 - 36,058,945 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha535,868,460 - 36,197,847 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0535,837,559 - 36,167,438 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl535,837,491 - 36,166,903 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1535,804,266 - 36,134,631 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0535,758,579 - 36,088,337 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0535,942,526 - 36,272,584 (+)NCBIUU_Cfam_GSD_1.0
Dnah9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560250,864,603 - 51,196,370 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365954,338,831 - 4,670,498 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365954,338,831 - 4,671,178 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNAH9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1256,045,381 - 56,358,236 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11256,045,079 - 56,366,327 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21259,166,522 - 59,264,325 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNAH9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11610,947,254 - 11,316,414 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1610,948,014 - 11,317,291 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660599,941,269 - 10,314,120 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnah9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462478614,031,718 - 14,411,533 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462478614,031,785 - 14,411,469 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dnah9
10664 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:953
Count of miRNA genes:553
Interacting mature miRNAs:654
Transcripts:ENSMUST00000080665, ENSMUST00000108691, ENSMUST00000130739, ENSMUST00000136124, ENSMUST00000142836, ENSMUST00000152386
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115406567067078411Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115925661769482699Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
4141642Ltxs2_mlethal factor toxin susceptibility 2 (mouse)Not determined116304211368500330Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse

Markers in Region
UniSTS:236618  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381166,121,150 - 66,121,379UniSTSGRCm38
MGSCv371165,934,652 - 65,934,881UniSTSGRCm37
Celera1173,057,123 - 73,057,352UniSTS
Cytogenetic Map11B3UniSTS
cM Map1133.0UniSTS
AU015669  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381166,121,237 - 66,121,437UniSTSGRCm38
MGSCv371165,934,739 - 65,934,939UniSTSGRCm37
Celera1173,057,210 - 73,057,410UniSTS
Cytogenetic Map11B3UniSTS
cM Map1133.0UniSTS
cM Map1140.53UniSTS
Whitehead/MRC_RH11863.02UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001099633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006533218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004936949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK030981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK039057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000080665   ⟹   ENSMUSP00000079494
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1165,722,108 - 66,059,359 (-)Ensembl
GRCm38.p6 Ensembl1165,831,282 - 66,168,533 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108691   ⟹   ENSMUSP00000104331
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1166,011,917 - 66,059,270 (-)Ensembl
GRCm38.p6 Ensembl1166,121,091 - 66,168,444 (-)Ensembl
RefSeq Acc Id: ENSMUST00000130739   ⟹   ENSMUSP00000116227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1165,797,683 - 65,818,784 (-)Ensembl
GRCm38.p6 Ensembl1165,906,857 - 65,927,958 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136124
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1165,742,011 - 65,746,533 (-)Ensembl
GRCm38.p6 Ensembl1165,851,185 - 65,855,707 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142836
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1166,049,578 - 66,059,377 (-)Ensembl
GRCm38.p6 Ensembl1166,158,752 - 66,168,551 (-)Ensembl
RefSeq Acc Id: ENSMUST00000152386   ⟹   ENSMUSP00000116499
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1165,722,229 - 65,896,021 (-)Ensembl
GRCm38.p6 Ensembl1165,831,403 - 66,005,195 (-)Ensembl
RefSeq Acc Id: NM_001099633   ⟹   NP_001093103
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,059,340 (-)NCBI
GRCm381165,831,324 - 66,168,551 (-)NCBI
MGSCv371165,644,826 - 65,982,053 (-)RGD
Celera1172,766,026 - 73,104,526 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533212   ⟹   XP_006533275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,059,372 (-)NCBI
GRCm381165,831,324 - 66,168,563 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533213   ⟹   XP_006533276
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,059,372 (-)NCBI
GRCm381165,831,324 - 66,168,563 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533214   ⟹   XP_006533277
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,059,294 (-)NCBI
GRCm381165,831,324 - 66,168,468 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533218   ⟹   XP_006533281
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,896,586 - 66,059,379 (-)NCBI
GRCm381166,005,760 - 66,168,581 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314521   ⟹   XP_017170010
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,059,372 (-)NCBI
GRCm381165,831,324 - 66,168,563 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314522   ⟹   XP_017170011
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,059,372 (-)NCBI
GRCm381165,831,324 - 66,168,563 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314523   ⟹   XP_017170012
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,740,800 - 66,059,376 (-)NCBI
GRCm381165,849,974 - 66,168,565 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314525   ⟹   XP_017170014
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,838,466 - 66,059,379 (-)NCBI
GRCm381165,947,640 - 66,168,577 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156656   ⟹   XP_036012549
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,012,593 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156657   ⟹   XP_036012550
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,010,076 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004936949
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391165,722,150 - 66,059,376 (-)NCBI
Sequence:
RefSeq Acc Id: NP_001093103   ⟸   NM_001099633
- UniProtKB: B1AR51 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006533276   ⟸   XM_006533213
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006533275   ⟸   XM_006533212
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006533277   ⟸   XM_006533214
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_006533281   ⟸   XM_006533218
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017170011   ⟸   XM_017314522
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017170010   ⟸   XM_017314521
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017170012   ⟸   XM_017314523
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017170014   ⟸   XM_017314525
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: ENSMUSP00000116227   ⟸   ENSMUST00000130739
RefSeq Acc Id: ENSMUSP00000116499   ⟸   ENSMUST00000152386
RefSeq Acc Id: ENSMUSP00000079494   ⟸   ENSMUST00000080665
RefSeq Acc Id: ENSMUSP00000104331   ⟸   ENSMUST00000108691
RefSeq Acc Id: XP_036012549   ⟸   XM_036156656
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036012550   ⟸   XM_036156657
- Peptide Label: isoform X7
Promoters
RGD ID:6820730
Promoter ID:MM_KWN:7913
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000013151,   OTTMUST00000013155,   UC007JLH.1,   UC007JLI.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361165,981,746 - 65,982,246 (-)MPROMDB
RGD ID:8675048
Promoter ID:EPDNEW_M15555
Type:initiation region
Name:Dnah9_1
Description:Mus musculus dynein, axonemal, heavy chain 9 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381166,168,511 - 66,168,571EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1289279 AgrOrtholog
Ensembl Genes ENSMUSG00000056752 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000080665 ENTREZGENE
  ENSMUST00000080665.10 UniProtKB/TrEMBL
  ENSMUST00000108691.2 UniProtKB/TrEMBL
  ENSMUST00000130739.2 UniProtKB/TrEMBL
  ENSMUST00000152386.8 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.2620 UniProtKB/TrEMBL
  1.10.472.130 UniProtKB/TrEMBL
  1.10.8.1220 UniProtKB/TrEMBL
  1.10.8.710 UniProtKB/TrEMBL
  1.10.8.720 UniProtKB/TrEMBL
  1.20.1270.280 UniProtKB/TrEMBL
  1.20.140.100 UniProtKB/TrEMBL
  1.20.58.1120 UniProtKB/TrEMBL
  1.20.920.20 UniProtKB/TrEMBL
  1.20.920.30 UniProtKB/TrEMBL
  3.10.490.20 UniProtKB/TrEMBL
  3.20.180.20 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  6.10.140.1060 UniProtKB/TrEMBL
InterPro AAA_6 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  AAA_lid_11_sf UniProtKB/TrEMBL
  DHC_D5 UniProtKB/TrEMBL
  DHC_fam UniProtKB/TrEMBL
  DNAH3_AAA_lid_1 UniProtKB/TrEMBL
  Dynein_2_C UniProtKB/TrEMBL
  Dynein_2_N UniProtKB/TrEMBL
  Dynein_AAA1S UniProtKB/TrEMBL
  Dynein_AAA5_ext UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_C_barrel UniProtKB/TrEMBL
  Dynein_HC_stalk UniProtKB/TrEMBL
  Dynein_heavy_chain_D4_dom UniProtKB/TrEMBL
  Dynein_heavy_dom UniProtKB/TrEMBL
  Dynein_heavy_dom-1 UniProtKB/TrEMBL
  Dynein_heavy_dom-2 UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report mmu:237806 UniProtKB/TrEMBL
MGD MGI:1289279 ENTREZGENE
NCBI Gene 237806 ENTREZGENE
PANTHER DHC_N1 DOMAIN-CONTAINING PROTEIN-RELATED UniProtKB/TrEMBL
  DYNEIN AXONEMAL HEAVY CHAIN 17 UniProtKB/TrEMBL
  DYNEIN AXONEMAL HEAVY CHAIN 5 UniProtKB/TrEMBL
  DYNEIN HEAVY CHAIN UniProtKB/TrEMBL
  MALE FERTILITY FACTOR KL5 UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam AAA_6 UniProtKB/TrEMBL
  AAA_7 UniProtKB/TrEMBL
  AAA_8 UniProtKB/TrEMBL
  AAA_9 UniProtKB/TrEMBL
  AAA_lid_1 UniProtKB/TrEMBL
  AAA_lid_11 UniProtKB/TrEMBL
  DHC_N1 UniProtKB/TrEMBL
  DHC_N2 UniProtKB/TrEMBL
  Dynein_AAA_lid UniProtKB/TrEMBL
  Dynein_C UniProtKB/TrEMBL
  Dynein_heavy UniProtKB/TrEMBL
  PF12777 UniProtKB/TrEMBL
PhenoGen Dnah9 PhenoGen
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt B1AR51 ENTREZGENE, UniProtKB/TrEMBL
  B7FAT5_MOUSE UniProtKB/TrEMBL
  F7DC70_MOUSE UniProtKB/TrEMBL
  Q5SX07_MOUSE UniProtKB/TrEMBL
  Q8BXT7_MOUSE UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-06-04 Dnah9  dynein, axonemal, heavy chain 9  Dnahc9    Symbol and/or name change 5135510 APPROVED