Mapk1ip1l (mitogen-activated protein kinase 1 interacting protein 1-like) - Rat Genome Database

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Gene: Mapk1ip1l (mitogen-activated protein kinase 1 interacting protein 1-like) Mus musculus
Analyze
Symbol: Mapk1ip1l
Name: mitogen-activated protein kinase 1 interacting protein 1-like
RGD ID: 1322926
MGI Page MGI
Description: Is expressed in otocyst. Orthologous to human MAPK1IP1L (mitogen-activated protein kinase 1 interacting protein 1 like).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 9130202B12; C130032J12Rik; MAPK-interacting and spindle-stabilizing protein-like; mitogen activated protein kinase 1 interacting protein 1-like; mitogen-activated protein kinase 1-interacting protein 1-like
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391447,535,731 - 47,560,663 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1447,535,723 - 47,560,661 (+)EnsemblGRCm39 Ensembl
GRCm381447,298,274 - 47,323,206 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1447,298,266 - 47,323,204 (+)EnsemblGRCm38mm10GRCm38
MGSCv371447,917,989 - 47,942,766 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361446,220,191 - 46,244,968 (+)NCBIMGSCv36mm8
Celera1443,484,886 - 43,510,380 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1424.6NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12819125   PMID:12904583   PMID:14610273  
PMID:15031102   PMID:15489334   PMID:15741177   PMID:15782199   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18799693   PMID:21267068   PMID:21677750   PMID:32325033  


Genomics

Comparative Map Data
Mapk1ip1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391447,535,731 - 47,560,663 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1447,535,723 - 47,560,661 (+)EnsemblGRCm39 Ensembl
GRCm381447,298,274 - 47,323,206 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1447,298,266 - 47,323,204 (+)EnsemblGRCm38mm10GRCm38
MGSCv371447,917,989 - 47,942,766 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361446,220,191 - 46,244,968 (+)NCBIMGSCv36mm8
Celera1443,484,886 - 43,510,380 (+)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1424.6NCBI
MAPK1IP1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381455,051,647 - 55,070,194 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1455,051,647 - 55,070,194 (+)EnsemblGRCh38hg38GRCh38
GRCh371455,518,365 - 55,536,912 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361454,588,115 - 54,606,665 (+)NCBINCBI36Build 36hg18NCBI36
Build 341454,588,153 - 54,605,973NCBI
Celera1435,567,856 - 35,586,404 (+)NCBICelera
Cytogenetic Map14q22.3NCBI
HuRef1435,680,990 - 35,699,535 (+)NCBIHuRef
CHM1_11455,456,982 - 55,475,551 (+)NCBICHM1_1
T2T-CHM13v2.01449,256,836 - 49,275,383 (+)NCBIT2T-CHM13v2.0
Mapk1ip1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81523,024,757 - 23,051,189 (+)NCBIGRCr8
mRatBN7.21520,545,043 - 20,571,466 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1520,545,059 - 20,569,674 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1523,325,683 - 23,352,110 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01524,283,645 - 24,310,072 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01522,533,612 - 22,559,851 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01524,078,280 - 24,100,546 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1524,078,280 - 24,101,821 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01528,019,022 - 28,046,006 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41523,250,737 - 23,274,011 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11523,266,224 - 23,289,390 (+)NCBI
Celera1520,939,588 - 20,961,662 (+)NCBICelera
Cytogenetic Map15p14NCBI
Mapk1ip1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554098,504,796 - 8,520,029 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554098,500,849 - 8,519,620 (-)NCBIChiLan1.0ChiLan1.0
MAPK1IP1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21556,173,361 - 56,191,664 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11455,389,868 - 55,408,172 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01435,638,690 - 35,656,992 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11453,913,344 - 53,931,241 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1453,913,344 - 53,931,203 (+)Ensemblpanpan1.1panPan2
MAPK1IP1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1830,902,532 - 30,918,352 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl830,893,315 - 30,914,210 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha830,670,529 - 30,686,965 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0831,161,702 - 31,178,138 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl831,161,656 - 31,178,023 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1830,765,007 - 30,781,434 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0830,842,064 - 30,858,503 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0831,206,462 - 31,222,873 (+)NCBIUU_Cfam_GSD_1.0
Mapk1ip1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864074,317,280 - 74,331,151 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493669791,485 - 105,305 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493669791,436 - 105,315 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAPK1IP1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1184,401,342 - 184,416,952 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11184,401,333 - 184,416,405 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21204,908,547 - 204,919,943 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MAPK1IP1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12432,229,567 - 32,244,225 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2432,240,008 - 32,242,931 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605320,466,090 - 20,480,624 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mapk1ip1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473114,343,949 - 14,354,596 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473114,340,288 - 14,354,979 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mapk1ip1l
979 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2071
Count of miRNA genes:611
Interacting mature miRNAs:736
Transcripts:ENSMUST00000164235, ENSMUST00000166743
Prediction methods:Miranda
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined992324548765082Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141516061649160765Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141882760452827726Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420887473121269804Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142106245071885801Mouse
14746973Manh76_mmandible shape 76 (mouse)142228721756287217Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492624858179769Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142792195761137449Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142999699463997133Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143032195748837457Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143032195752937457Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143032195787937436Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143033525064335381Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143033525064335381Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143322195759437449Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143412195752937457Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143504579768785736Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143743018571430320Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4033731974337319Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144296241676962593Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144296241676962593Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144303727077037418Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144306584777066045Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144306584777066045Mouse
4141484Hcbip1_mhexachlorobenzene induced porphyria 1 (mouse)Not determined4733525059962593Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001360542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC156016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC047201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC089366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG091872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY783030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000164235   ⟹   ENSMUSP00000132875
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,546,007 - 47,560,661 (+)Ensembl
GRCm38.p6 Ensembl1447,308,550 - 47,323,204 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166743   ⟹   ENSMUSP00000127475
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,535,726 - 47,560,552 (+)Ensembl
GRCm38.p6 Ensembl1447,298,269 - 47,323,095 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227554   ⟹   ENSMUSP00000154689
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,536,228 - 47,548,271 (+)Ensembl
GRCm38.p6 Ensembl1447,298,771 - 47,310,814 (+)Ensembl
RefSeq Acc Id: ENSMUST00000227941
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,535,723 - 47,538,827 (+)Ensembl
GRCm38.p6 Ensembl1447,298,266 - 47,301,370 (+)Ensembl
RefSeq Acc Id: ENSMUST00000228058   ⟹   ENSMUSP00000154193
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,548,405 - 47,551,615 (+)Ensembl
GRCm38.p6 Ensembl1447,310,948 - 47,314,158 (+)Ensembl
RefSeq Acc Id: NM_001360542   ⟹   NP_001347471
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,535,731 - 47,554,937 (+)NCBI
GRCm381447,298,274 - 47,317,480 (+)NCBI
Sequence:
RefSeq Acc Id: NM_178684   ⟹   NP_848799
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,535,731 - 47,560,663 (+)NCBI
GRCm381447,298,274 - 47,323,206 (+)NCBI
MGSCv371447,917,989 - 47,942,766 (+)RGD
Celera1443,484,886 - 43,510,380 (+)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_848799   ⟸   NM_178684
- Peptide Label: isoform 1
- UniProtKB: Q3TGL0 (UniProtKB/Swiss-Prot),   Q3TF12 (UniProtKB/Swiss-Prot),   Q8CC90 (UniProtKB/Swiss-Prot),   Q8BH93 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001347471   ⟸   NM_001360542
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000132875   ⟸   ENSMUST00000164235
RefSeq Acc Id: ENSMUSP00000127475   ⟸   ENSMUST00000166743
RefSeq Acc Id: ENSMUSP00000154193   ⟸   ENSMUST00000228058
RefSeq Acc Id: ENSMUSP00000154689   ⟸   ENSMUST00000227554

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BH93-F1-model_v2 AlphaFold Q8BH93 1-242 view protein structure

Promoters
RGD ID:8682074
Promoter ID:EPDNEW_M19067
Type:initiation region
Name:Mapk1ip1l_1
Description:Mus musculus mitogen-activated protein kinase 1 interacting protein1-like , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381447,298,277 - 47,298,337EPDNEW
RGD ID:6825153
Promoter ID:MM_KWN:16471
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000043494,   NM_178684
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361447,917,016 - 47,918,047 (+)MPROMDB
RGD ID:6824746
Promoter ID:MM_KWN:16472
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:UC007THZ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361447,927,401 - 47,927,901 (+)MPROMDB
RGD ID:6847120
Promoter ID:MM_ACW:15805
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney
Transcripts:C130032J12RIK.DSEP07-UNSPLICED,   SLARMU.ASEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361447,930,226 - 47,930,726 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2444022 AgrOrtholog
Ensembl Genes ENSMUSG00000021840 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000164235.3 UniProtKB/Swiss-Prot
  ENSMUST00000166743 ENTREZGENE
  ENSMUST00000166743.9 UniProtKB/Swiss-Prot
  ENSMUST00000227554.2 UniProtKB/TrEMBL
  ENSMUST00000228058.2 UniProtKB/TrEMBL
InterPro MISS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:218975 UniProtKB/Swiss-Prot
MGD MGI:2444022 ENTREZGENE
NCBI Gene 218975 ENTREZGENE
PANTHER MAPK-INTERACTING AND SPINDLE-STABILIZING PROTEIN-LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR35973 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MISS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mapk1ip1l PhenoGen
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
UniProt A0A2I3BQG9_MOUSE UniProtKB/TrEMBL
  A0A2I3BRS9_MOUSE UniProtKB/TrEMBL
  MISSL_MOUSE UniProtKB/Swiss-Prot
  Q3TF12 ENTREZGENE
  Q3TGL0 ENTREZGENE
  Q5EBP1_MOUSE UniProtKB/TrEMBL
  Q8BH93 ENTREZGENE
  Q8CC90 ENTREZGENE
UniProt Secondary Q3TF12 UniProtKB/Swiss-Prot
  Q3TGL0 UniProtKB/Swiss-Prot
  Q8CC90 UniProtKB/Swiss-Prot