Pnpla8 (patatin-like phospholipase domain containing 8) - Rat Genome Database

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Gene: Pnpla8 (patatin-like phospholipase domain containing 8) Mus musculus
Analyze
Symbol: Pnpla8
Name: patatin-like phospholipase domain containing 8
RGD ID: 1322912
MGI Page MGI
Description: Enables calcium-independent phospholipase A2 activity. Involved in cardiolipin metabolic process; regulation of cellular response to oxidative stress; and triglyceride homeostasis. Located in mitochondrion and peroxisome. Orthologous to human PNPLA8 (patatin like phospholipase domain containing 8).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1200006O19Rik; AI467579; calcium-independent phospholipase A2-gamma; intracellular membrane-associated calcium-independent phospholipase A2 gamma; iPLA2 gamma; Ipla2(gamma); iPLA2-gamma; MGC150064; patatin-like phospholipase domain-containing protein 8
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18974  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391244,315,916 - 44,362,718 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1244,268,153 - 44,369,315 (+)EnsemblGRCm39 Ensembl
GRCm381244,269,132 - 44,315,936 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1244,221,370 - 44,322,532 (+)EnsemblGRCm38mm10GRCm38
MGSCv371245,370,141 - 45,414,424 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361245,139,472 - 45,182,573 (+)NCBIMGSCv36mm8
Celera1245,626,908 - 45,667,980 (+)NCBICelera
Cytogenetic Map12B2NCBI
cM Map1220.71NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
(S)-nicotine  (EXP)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (EXP)
benzo[a]pyrene  (EXP)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (EXP,ISO)
Brodifacoum  (ISO)
buspirone  (ISO)
cadmium dichloride  (EXP)
caffeine  (EXP)
CGP 52608  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
CU-O LINKAGE  (ISO)
cyclosporin A  (EXP,ISO)
DDT  (ISO)
dibutyl phthalate  (EXP)
dicrotophos  (ISO)
ethanol  (EXP)
ethyl methanesulfonate  (ISO)
fenvalerate  (ISO)
finasteride  (ISO)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
FR900359  (ISO)
gallic acid  (ISO)
L-methionine  (EXP)
leflunomide  (ISO)
methidathion  (EXP)
methimazole  (ISO)
methyl methanesulfonate  (ISO)
nefazodone  (ISO)
nicotine  (EXP)
nimesulide  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
pirinixic acid  (EXP)
resveratrol  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tetrachloroethene  (EXP)
tributylstannane  (ISO)
Triptolide  (ISO)
urethane  (ISO)
valproic acid  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14610273   PMID:15024020   PMID:15471944   PMID:16141072   PMID:16141073   PMID:17213206  
PMID:17923475   PMID:18799693   PMID:19840936   PMID:20179248   PMID:20625036   PMID:20817734   PMID:21191104   PMID:21267068   PMID:21873635   PMID:22389508   PMID:22778252   PMID:23354121  
PMID:23429536   PMID:25313821   PMID:25492867   PMID:26206229   PMID:27226532   PMID:27453526   PMID:27767079   PMID:28442572   PMID:29035365   PMID:31700134   PMID:32161117   PMID:32325033  
PMID:32581705   PMID:32879212   PMID:36719796   PMID:37275531  


Genomics

Comparative Map Data
Pnpla8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391244,315,916 - 44,362,718 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1244,268,153 - 44,369,315 (+)EnsemblGRCm39 Ensembl
GRCm381244,269,132 - 44,315,936 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1244,221,370 - 44,322,532 (+)EnsemblGRCm38mm10GRCm38
MGSCv371245,370,141 - 45,414,424 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361245,139,472 - 45,182,573 (+)NCBIMGSCv36mm8
Celera1245,626,908 - 45,667,980 (+)NCBICelera
Cytogenetic Map12B2NCBI
cM Map1220.71NCBI
PNPLA8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387108,470,417 - 108,528,178 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7108,470,417 - 108,569,666 (-)EnsemblGRCh38hg38GRCh38
GRCh377108,110,861 - 108,168,622 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367107,899,305 - 107,953,874 (-)NCBINCBI36Build 36hg18NCBI36
Celera7102,925,427 - 102,979,992 (-)NCBICelera
Cytogenetic Map7q31.1NCBI
HuRef7102,479,082 - 102,536,797 (-)NCBIHuRef
CHM1_17108,044,179 - 108,101,909 (-)NCBICHM1_1
T2T-CHM13v2.07109,795,069 - 109,852,801 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27107,478,078 - 107,535,820 (-)NCBI
Pnpla8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8667,056,783 - 67,118,714 (+)NCBIGRCr8
mRatBN7.2661,329,810 - 61,391,736 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl661,329,810 - 61,391,734 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx661,665,649 - 61,727,585 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0661,980,640 - 62,042,576 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0661,453,124 - 61,515,027 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0664,224,870 - 64,288,465 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl664,224,861 - 64,286,785 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0673,814,201 - 73,876,147 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4663,644,462 - 63,676,544 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1663,674,719 - 63,707,771 (+)NCBI
Celera660,325,313 - 60,388,908 (+)NCBICelera
Cytogenetic Map6q21NCBI
Pnpla8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541012,711,082 - 12,753,433 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541012,715,072 - 12,753,433 (-)NCBIChiLan1.0ChiLan1.0
PNPLA8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26145,320,226 - 145,365,332 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan17193,590,196 - 193,681,667 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07100,456,096 - 100,511,836 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17113,176,014 - 113,230,799 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7113,177,202 - 113,230,799 (-)Ensemblpanpan1.1panPan2
PNPLA8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11812,134,921 - 12,181,496 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1812,141,830 - 12,179,974 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1811,779,378 - 11,825,993 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01812,406,088 - 12,453,716 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1812,406,080 - 12,454,928 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11812,223,261 - 12,270,831 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01812,143,880 - 12,191,247 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01812,371,185 - 12,418,564 (+)NCBIUU_Cfam_GSD_1.0
Pnpla8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511868,318,956 - 68,348,464 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366531,470,299 - 1,499,900 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366531,470,314 - 1,499,813 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PNPLA8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9108,269,830 - 108,320,267 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19108,271,343 - 108,320,574 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29119,139,826 - 119,157,430 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PNPLA8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12177,385,923 - 77,437,894 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2177,385,537 - 77,437,860 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604226,424,768 - 26,477,705 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pnpla8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473921,260,117 - 21,289,195 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473921,252,812 - 21,305,118 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pnpla8
1725 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:644
Count of miRNA genes:232
Interacting mature miRNAs:261
Transcripts:ENSMUST00000043082, ENSMUST00000122902, ENSMUST00000125757, ENSMUST00000143771, ENSMUST00000156082
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
14746972Manh72_mmandible shape 72 (mouse)121061528144615281Mouse
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121062064244620809Mouse
13524843Ppiq8_mprepulse inhibition QTL 8 (mouse)121104319450945796Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
4141516slwr_mslowlearner (mouse)Not determined1239247546392614Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121514733149147331Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121615000147746783Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121782585251825852Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121783993951840081Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121825996652260067Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121973983353739833Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123493387268934019Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123509100465511019Mouse
12879483Asp1_maudiogenic seizure prone 1 (mouse)123528549646801733Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse
13524845Ppiq8a_mprepulse inhibition QTL 8a (mouse)124032341244945796Mouse
1357479Splwt1_mspleen weight 1 (mouse)Not determined124169317590887526Mouse

Markers in Region
AI467579  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381244,313,019 - 44,313,108UniSTSGRCm38
MGSCv371245,414,006 - 45,414,095UniSTSGRCm37
Celera1245,667,562 - 45,667,651UniSTS
Cytogenetic Map12B3UniSTS
Whitehead/MRC_RH12492.04UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_026164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006516174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB044139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC164550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC127056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ112890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000043082   ⟹   ENSMUSP00000043286
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1244,315,931 - 44,369,315 (+)Ensembl
GRCm38.p6 Ensembl1244,269,148 - 44,322,532 (+)Ensembl
RefSeq Acc Id: ENSMUST00000122902   ⟹   ENSMUSP00000120877
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1244,268,153 - 44,358,875 (+)Ensembl
GRCm38.p6 Ensembl1244,221,370 - 44,312,092 (+)Ensembl
RefSeq Acc Id: ENSMUST00000125757   ⟹   ENSMUSP00000117126
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1244,322,054 - 44,329,673 (+)Ensembl
GRCm38.p6 Ensembl1244,275,271 - 44,282,890 (+)Ensembl
RefSeq Acc Id: ENSMUST00000143771   ⟹   ENSMUSP00000122560
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1244,329,356 - 44,359,126 (+)Ensembl
GRCm38.p6 Ensembl1244,282,573 - 44,312,343 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156082   ⟹   ENSMUSP00000116922
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1244,346,057 - 44,359,276 (+)Ensembl
GRCm38.p6 Ensembl1244,299,274 - 44,312,493 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218803   ⟹   ENSMUSP00000151351
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1244,337,393 - 44,358,408 (+)Ensembl
GRCm38.p6 Ensembl1244,290,610 - 44,311,625 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218954   ⟹   ENSMUSP00000151660
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1244,315,950 - 44,330,300 (+)Ensembl
GRCm38.p6 Ensembl1244,269,167 - 44,283,517 (+)Ensembl
RefSeq Acc Id: NM_026164   ⟹   NP_080440
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391244,315,937 - 44,360,220 (+)NCBI
GRCm381244,269,154 - 44,313,437 (+)NCBI
MGSCv371245,370,141 - 45,414,424 (+)RGD
Celera1245,626,908 - 45,667,980 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006516174   ⟹   XP_006516237
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391244,315,916 - 44,362,718 (+)NCBI
GRCm381244,269,132 - 44,315,936 (+)NCBI
Sequence:
RefSeq Acc Id: NP_080440   ⟸   NM_026164
- UniProtKB: Q8VEC0 (UniProtKB/Swiss-Prot),   Q3TH33 (UniProtKB/Swiss-Prot),   Q9DC20 (UniProtKB/Swiss-Prot),   Q8K1N1 (UniProtKB/Swiss-Prot),   E9QAC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006516237   ⟸   XM_006516174
- Peptide Label: isoform X1
- UniProtKB: E9QAC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000117126   ⟸   ENSMUST00000125757
RefSeq Acc Id: ENSMUSP00000151660   ⟸   ENSMUST00000218954
RefSeq Acc Id: ENSMUSP00000151351   ⟸   ENSMUST00000218803
RefSeq Acc Id: ENSMUSP00000122560   ⟸   ENSMUST00000143771
RefSeq Acc Id: ENSMUSP00000120877   ⟸   ENSMUST00000122902
RefSeq Acc Id: ENSMUSP00000116922   ⟸   ENSMUST00000156082
RefSeq Acc Id: ENSMUSP00000043286   ⟸   ENSMUST00000043082
Protein Domains
PNPLA

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8K1N1-F1-model_v2 AlphaFold Q8K1N1 1-776 view protein structure

Promoters
RGD ID:8678214
Promoter ID:EPDNEW_M17138
Type:initiation region
Name:Pnpla8_1
Description:Mus musculus patatin-like phospholipase domain containing 8 ,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17137  EPDNEW_M17136  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381244,269,186 - 44,269,246EPDNEW
RGD ID:6823272
Promoter ID:MM_KWN:11563
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_026164
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361245,369,591 - 45,370,637 (+)MPROMDB
RGD ID:6823276
Promoter ID:MM_KWN:11565
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4
Transcripts:OTTMUST00000084149
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361245,382,831 - 45,383,331 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914702 AgrOrtholog
Ensembl Genes ENSMUSG00000036257 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000043082 ENTREZGENE
  ENSMUST00000043082.16 UniProtKB/Swiss-Prot
  ENSMUST00000122902.8 UniProtKB/TrEMBL
  ENSMUST00000125757.2 UniProtKB/TrEMBL
  ENSMUST00000143771.2 UniProtKB/TrEMBL
  ENSMUST00000156082.3 UniProtKB/TrEMBL
  ENSMUST00000218803.2 UniProtKB/TrEMBL
  ENSMUST00000218954.2 UniProtKB/TrEMBL
Gene3D-CATH Cytosolic phospholipase A2 catalytic domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Acyl_Trfase/lysoPLipase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PNPLA8-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PNPLA_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67452 UniProtKB/Swiss-Prot
MGD MGI:1914702 ENTREZGENE
NCBI Gene 67452 ENTREZGENE
PANTHER CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA UniProtKB/Swiss-Prot
  CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA UniProtKB/Swiss-Prot
  CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA UniProtKB/TrEMBL
  CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA UniProtKB/TrEMBL
Pfam Patatin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pnpla8 PhenoGen
PROSITE PNPLA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52151 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1W2P6P7_MOUSE UniProtKB/TrEMBL
  A0A1W2P7I1_MOUSE UniProtKB/TrEMBL
  D3Z5W9_MOUSE UniProtKB/TrEMBL
  E9PXB0_MOUSE UniProtKB/TrEMBL
  E9QAC9 ENTREZGENE, UniProtKB/TrEMBL
  F7B2N8_MOUSE UniProtKB/TrEMBL
  PLPL8_MOUSE UniProtKB/Swiss-Prot
  Q3TH33 ENTREZGENE
  Q8K1N1 ENTREZGENE
  Q8VEC0 ENTREZGENE
  Q9CVC9_MOUSE UniProtKB/TrEMBL
  Q9DC20 ENTREZGENE
UniProt Secondary Q3TH33 UniProtKB/Swiss-Prot
  Q8VEC0 UniProtKB/Swiss-Prot
  Q9DC20 UniProtKB/Swiss-Prot