Ap1ar (adaptor-related protein complex 1 associated regulatory protein) - Rat Genome Database

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Gene: Ap1ar (adaptor-related protein complex 1 associated regulatory protein) Mus musculus
Analyze
Symbol: Ap1ar
Name: adaptor-related protein complex 1 associated regulatory protein
RGD ID: 1322897
MGI Page MGI
Description: Predicted to enable AP-1 adaptor complex binding activity; Arp2/3 complex binding activity; and kinesin binding activity. Acts upstream of or within several processes, including negative regulation of cell motility; negative regulation of substrate adhesion-dependent cell spreading; and regulation of Arp2/3 complex-mediated actin nucleation. Located in endosome. Is expressed in several structures, including cardiovascular system; genitourinary system; gut; integumental system; and nervous system. Orthologous to human AP1AR (adaptor related protein complex 1 associated regulatory protein).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AA407621; C78909; Gad; Gadkin; MGC7434
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393127,600,656 - 127,631,172 (-)NCBIGRCm39mm39
GRCm39 Ensembl3127,600,656 - 127,631,172 (-)Ensembl
GRCm383127,807,007 - 127,837,523 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3127,807,007 - 127,837,523 (-)EnsemblGRCm38mm10GRCm38
MGSCv373127,510,182 - 127,540,410 (-)NCBIGRCm37mm9NCBIm37
MGSCv363127,799,286 - 127,800,886 (-)NCBImm8
Celera3134,309,497 - 134,339,336 (-)NCBICelera
Cytogenetic Map3G2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
aniridia  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:18799693   PMID:21873635   PMID:22689987   PMID:24194600   PMID:26179914   PMID:26624014   PMID:28658630  


Genomics

Comparative Map Data
Ap1ar
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393127,600,656 - 127,631,172 (-)NCBIGRCm39mm39
GRCm39 Ensembl3127,600,656 - 127,631,172 (-)Ensembl
GRCm383127,807,007 - 127,837,523 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3127,807,007 - 127,837,523 (-)EnsemblGRCm38mm10GRCm38
MGSCv373127,510,182 - 127,540,410 (-)NCBIGRCm37mm9NCBIm37
MGSCv363127,799,286 - 127,800,886 (-)NCBImm8
Celera3134,309,497 - 134,339,336 (-)NCBICelera
Cytogenetic Map3G2NCBI
AP1AR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384112,231,787 - 112,273,110 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl4112,231,740 - 112,273,110 (+)EnsemblGRCh38hg38GRCh38
GRCh374113,152,943 - 113,194,266 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364113,372,430 - 113,410,655 (+)NCBINCBI36hg18NCBI36
Build 344113,510,584 - 113,548,807NCBI
Celera4110,446,973 - 110,485,290 (+)NCBI
Cytogenetic Map4q25NCBI
HuRef4108,884,439 - 108,922,756 (+)NCBIHuRef
CHM1_14113,129,708 - 113,168,024 (+)NCBICHM1_1
T2T-CHM13v2.04115,540,139 - 115,581,470 (+)NCBI
Ap1ar
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22216,276,631 - 216,309,020 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl2216,276,631 - 216,309,013 (-)Ensembl
Rnor_6.02232,146,418 - 232,178,813 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2232,147,690 - 232,178,671 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02251,491,339 - 251,523,675 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42225,085,891 - 225,117,932 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12225,072,570 - 225,170,786 (-)NCBI
Celera2208,587,940 - 208,619,983 (-)NCBICelera
Cytogenetic Map2q42NCBI
Ap1ar
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545714,457,990 - 14,491,435 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545714,456,414 - 14,471,584 (-)NCBIChiLan1.0ChiLan1.0
AP1AR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14115,282,638 - 115,325,525 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4115,282,727 - 115,322,872 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04104,720,583 - 104,762,097 (+)NCBIMhudiblu_PPA_v0panPan3
AP1AR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13232,083,077 - 32,123,857 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3232,083,105 - 32,122,200 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha329,909,249 - 9,952,014 (-)NCBI
ROS_Cfam_1.03232,304,857 - 32,347,579 (+)NCBI
ROS_Cfam_1.0 Ensembl3232,304,823 - 32,347,561 (+)Ensembl
UMICH_Zoey_3.13232,288,021 - 32,330,678 (+)NCBI
UNSW_CanFamBas_1.03232,048,897 - 32,091,580 (+)NCBI
UU_Cfam_GSD_1.0327,769,793 - 7,812,842 (-)NCBI
Ap1ar
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053018,764,417 - 8,801,142 (-)NCBI
SpeTri2.0NW_0049365633,108,242 - 3,144,957 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AP1AR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8110,386,776 - 110,505,320 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18110,386,145 - 110,420,548 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28118,367,438 - 118,401,080 (-)NCBISscrofa10.2Sscrofa10.2susScr3
AP1AR
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1760,029,576 - 60,069,199 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl760,052,140 - 60,071,815 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603738,790,233 - 38,832,900 (+)NCBIVero_WHO_p1.0
Ap1ar
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248386,129,771 - 6,157,962 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046248386,129,073 - 6,157,971 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
C78909  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383127,807,368 - 127,807,466UniSTSGRCm38
MGSCv373127,510,286 - 127,510,384UniSTSGRCm37
Celera3134,309,601 - 134,309,699UniSTS
Cytogenetic Map3G2UniSTS
Whitehead/MRC_RH31440.12UniSTS
RH125707  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm383127,807,081 - 127,807,329UniSTSGRCm38
MGSCv373127,509,999 - 127,510,247UniSTSGRCm37
Celera3134,309,314 - 134,309,562UniSTS
Cytogenetic Map3G2UniSTS
Whitehead/MRC_RH31439.1UniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
4142178Ctrq2_mC. trachomatis resistance QTL 2 (mouse)Not determined389139967137453008Mouse
27226732Tibmd3_mtibia midshaft diameter 3, 10 week (mouse)396607316147805636Mouse
10043955Wt10q4_mbody weight, 10 weeks, QTL 4 (mouse)Not determined398624041132624197Mouse
11533920Mvb3_mmodifier of vibrator 3 (mouse)398635284132635383Mouse
12792984Modn1_mmodifier of Dstn neovascularization 1 (mouse)398635284132635383Mouse
1302114Tbs1_mtuberculosis severity 1 (mouse)Not determined398924105132924250Mouse
1300752Ap6q_malcohol preference 6 QTL (mouse)Not determined3100372912147045722Mouse
26884419Bzwq6_mbi-zygomatic width QTL 6, 10 week (mouse)3100607316137205761Mouse
27226733Tibmd6_mtibia midshaft diameter 6, 16 week (mouse)3101307316149805637Mouse
1301805Mors2_mmodifier of obesity related sterility 2 (mouse)Not determined3103482659137482783Mouse
1302093Orgwq5_morgan weight QTL 5 (mouse)Not determined3107376936147304689Mouse
1300619Cdcs1_mcytokine deficiency colitis susceptibility 1 (mouse)Not determined3109834882143835005Mouse
12910793Pwbwq7_mpost-weaning body weight QTL 7 (mouse)3110084357135715812Mouse
12910796Pwbwq6_mpost-weaning body weight QTL 6 (mouse)3110084357135715812Mouse
12910815Ogrq1_moverall growth rate QTL 1 (mouse)3110084357135715812Mouse
1301381Bomb1_mbone marrow pre-B 1 (mouse)Not determined3111133243145133417Mouse
1301100Bdt2_mbone density traits 2 (mouse)Not determined3114736617148736784Mouse
10043919Afpq8_mabdominal fat percent QTL 8 (mouse)Not determined3119057332153057456Mouse
1558868Ses9_msalmonella enteritidis susceptibility 9 (mouse)Not determined3119057332153057456Mouse
4141935Tgq15_mtriglyceride QTL 15 (mouse)Not determined119318586153318586Mouse
4142449Tgq14_mtriglyceride QTL 14 (mouse)Not determined119318586153318586Mouse
1302151Lprm2_mlymphoproliferation modifier 2 (mouse)Not determined3119778857153779044Mouse
10412240Alpq6_malcohol preference QTL 6 (mouse)Not determined3120772078154772078Mouse
26884415Bzwq11_mbi-zygomatic width QTL 11, 16 week (mouse)3124993649137205761Mouse
4142245Pstc1_mperiosteal circumference 1 (mouse)Not determined3126270248159745316Mouse
1301218Letohc1_mlow ethanol consumption 1 (mouse)Not determined3126352986159745316Mouse
1301347Fpli_mfasting plasma insulin (mouse)Not determined3126460514159745316Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:368
Count of miRNA genes:277
Interacting mature miRNAs:313
Transcripts:ENSMUST00000051737
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006501245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC163391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK191655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB611022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC002199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA318176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ045033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ130605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ169738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JQ664736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000051737   ⟹   ENSMUSP00000059669
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,600,661 - 127,631,160 (-)Ensembl
GRCm38.p6 Ensembl3127,807,012 - 127,837,511 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196392   ⟹   ENSMUSP00000142961
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,614,432 - 127,630,905 (-)Ensembl
GRCm38.p6 Ensembl3127,820,783 - 127,837,256 (-)Ensembl
RefSeq Acc Id: ENSMUST00000196687
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,613,328 - 127,619,147 (-)Ensembl
GRCm38.p6 Ensembl3127,819,679 - 127,825,498 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197450
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,605,702 - 127,606,336 (-)Ensembl
GRCm38.p6 Ensembl3127,812,053 - 127,812,687 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197471
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,614,397 - 127,616,282 (-)Ensembl
GRCm38.p6 Ensembl3127,820,748 - 127,822,633 (-)Ensembl
RefSeq Acc Id: ENSMUST00000197744
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,609,302 - 127,610,956 (-)Ensembl
GRCm38.p6 Ensembl3127,815,653 - 127,817,307 (-)Ensembl
RefSeq Acc Id: ENSMUST00000198626
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,600,916 - 127,602,513 (-)Ensembl
GRCm38.p6 Ensembl3127,807,267 - 127,808,864 (-)Ensembl
RefSeq Acc Id: ENSMUST00000199901
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,606,893 - 127,611,267 (-)Ensembl
GRCm38.p6 Ensembl3127,813,244 - 127,817,618 (-)Ensembl
RefSeq Acc Id: ENSMUST00000200238
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,614,396 - 127,630,880 (-)Ensembl
GRCm38.p6 Ensembl3127,820,747 - 127,837,231 (-)Ensembl
RefSeq Acc Id: ENSMUST00000200409   ⟹   ENSMUSP00000143466
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl3127,600,656 - 127,631,172 (-)Ensembl
GRCm38.p6 Ensembl3127,807,007 - 127,837,523 (-)Ensembl
RefSeq Acc Id: NM_001346718   ⟹   NP_001333647
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,172 (-)NCBI
GRCm383127,807,007 - 127,837,523 (-)NCBI
Sequence:
RefSeq Acc Id: NM_145964   ⟹   NP_666076
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,172 (-)NCBI
GRCm383127,807,007 - 127,837,523 (-)NCBI
MGSCv373127,510,182 - 127,540,410 (-)RGD
Celera3134,309,497 - 134,339,336 (-)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006501240   ⟹   XP_006501303
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,148 (-)NCBI
GRCm383127,807,007 - 127,837,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006501241   ⟹   XP_006501304
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,148 (-)NCBI
GRCm383127,807,007 - 127,837,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006501242   ⟹   XP_006501305
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,148 (-)NCBI
GRCm383127,807,007 - 127,837,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006501243   ⟹   XP_006501306
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,629,818 (-)NCBI
GRCm383127,807,007 - 127,836,169 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006501244   ⟹   XP_006501307
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,148 (-)NCBI
GRCm383127,807,007 - 127,837,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006501245   ⟹   XP_006501308
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,629,818 (-)NCBI
GRCm383127,807,007 - 127,836,169 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252524   ⟹   XP_030108384
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,148 (-)NCBI
GRCm383127,807,007 - 127,837,491 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252525   ⟹   XP_030108385
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,121 (-)NCBI
GRCm383127,807,007 - 127,837,473 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030252526   ⟹   XP_030108386
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm393127,600,656 - 127,631,136 (-)NCBI
GRCm383127,807,007 - 127,837,473 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_666076   ⟸   NM_145964
- Peptide Label: isoform 1
- UniProtKB: E9PYF7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006501307   ⟸   XM_006501244
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006501304   ⟸   XM_006501241
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006501305   ⟸   XM_006501242
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006501303   ⟸   XM_006501240
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006501308   ⟸   XM_006501245
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_006501306   ⟸   XM_006501243
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: NP_001333647   ⟸   NM_001346718
- Peptide Label: isoform 2
- UniProtKB: A0A0G2JG85 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030108384   ⟸   XM_030252524
- Peptide Label: isoform X7
RefSeq Acc Id: XP_030108386   ⟸   XM_030252526
- Peptide Label: isoform X9
RefSeq Acc Id: XP_030108385   ⟸   XM_030252525
- Peptide Label: isoform X8
RefSeq Acc Id: ENSMUSP00000059669   ⟸   ENSMUST00000051737
RefSeq Acc Id: ENSMUSP00000142961   ⟸   ENSMUST00000196392
RefSeq Acc Id: ENSMUSP00000143466   ⟸   ENSMUST00000200409

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-E9PYF7-F1-model_v2 AlphaFold E9PYF7 1-298 view protein structure

Promoters
RGD ID:6833435
Promoter ID:MM_KWN:36058
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000051737
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv363127,540,286 - 127,540,786 (-)MPROMDB
RGD ID:6882332
Promoter ID:EPDNEW_M4617
Type:initiation region
Name:Ap1ar_1
Description:Mus musculus adaptor-related protein complex 1 associated regulatoryprotein , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm383127,837,497 - 127,837,557EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2384822 AgrOrtholog
Ensembl Genes ENSMUSG00000074238 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000059669 ENTREZGENE
  ENSMUSP00000059669.7 UniProtKB/TrEMBL
  ENSMUSP00000142961.2 UniProtKB/TrEMBL
  ENSMUSP00000143466 ENTREZGENE
  ENSMUSP00000143466.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000051737 ENTREZGENE
  ENSMUST00000051737.8 UniProtKB/TrEMBL
  ENSMUST00000196392.2 UniProtKB/TrEMBL
  ENSMUST00000200409 ENTREZGENE
  ENSMUST00000200409.5 UniProtKB/TrEMBL
InterPro AP1AR UniProtKB/TrEMBL
KEGG Report mmu:211556 UniProtKB/TrEMBL
MGD MGI:2384822 ENTREZGENE
NCBI Gene 211556 ENTREZGENE
PANTHER PTHR34529 UniProtKB/TrEMBL
Pfam AP1AR UniProtKB/TrEMBL
PhenoGen Ap1ar PhenoGen
UniProt A0A0G2JEZ5_MOUSE UniProtKB/TrEMBL
  A0A0G2JG85 ENTREZGENE, UniProtKB/TrEMBL
  E9PYF7 ENTREZGENE, UniProtKB/TrEMBL
  Q99LV9_MOUSE UniProtKB/TrEMBL