Epb41l5 (erythrocyte membrane protein band 4.1 like 5) - Rat Genome Database

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Gene: Epb41l5 (erythrocyte membrane protein band 4.1 like 5) Mus musculus
Analyze
Symbol: Epb41l5
Name: erythrocyte membrane protein band 4.1 like 5
RGD ID: 1322787
MGI Page MGI
Description: Exhibits protein domain specific binding activity. Involved in several processes, including chordate embryonic development; mesenchyme development; and mesoderm morphogenesis. Localizes to focal adhesion and ruffle membrane. Is expressed in several structures, including foregut gland; lung; metanephros; neural tube; and primitive streak. Orthologous to human EPB41L5 (erythrocyte membrane protein band 4.1 like 5); INTERACTS WITH 2,2',4,4',5,5'-hexachlorobiphenyl; 2,2',5,5'-tetrachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1700030C16Rik; AL022914; band 4.1-like protein 5; BE37; E230025E14Rik; Epb4.1; Epb4.1l5; erythrocyte protein band 4.1 like 5; erythrocyte protein band 4.1-like 5; Lul; Lulu1; NB; NBL5; RIKEN cDNA E230025E14 gene
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm18706  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391119,472,762 - 119,576,826 (-)NCBIGRCm39mm39
GRCm39 Ensembl1119,472,767 - 119,576,730 (-)Ensembl
GRCm381119,545,032 - 119,649,096 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1119,545,037 - 119,649,000 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,441,610 - 121,545,577 (-)NCBIGRCm37mm9NCBIm37
MGSCv361121,375,677 - 121,476,482 (-)NCBImm8
Celera1122,204,130 - 122,307,894 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal cell nucleus morphology  (IAGP)
abnormal developmental patterning  (IAGP)
abnormal ectoderm development  (IAGP)
abnormal embryonic neuroepithelium morphology  (IAGP)
abnormal embryonic tissue morphology  (IAGP)
abnormal endoderm development  (IAGP)
abnormal extraembryonic tissue morphology  (IAGP)
abnormal foregut morphology  (IAGP)
abnormal germ layer development  (IAGP)
abnormal heart development  (IAGP)
abnormal mesoderm development  (IAGP)
abnormal neural plate morphology  (IAGP)
abnormal neural tube morphology  (IAGP)
abnormal primitive streak morphology  (IAGP)
abnormal retina morphology  (IEA)
abnormal rostral-caudal axis patterning  (IAGP)
abnormal rostral-caudal body axis extension  (IAGP)
abnormal somite development  (IAGP)
abnormal somite shape  (IAGP)
absent somites  (IAGP)
decreased axial mesoderm size  (IAGP)
decreased circulating glycerol level  (IEA)
decreased embryo size  (IAGP)
decreased paraxial mesoderm size  (IAGP)
embryonic growth arrest  (IAGP)
embryonic lethality between somite formation and embryo turning  (IAGP)
embryonic lethality between somite formation and embryo turning, complete penetrance  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
excessive folding of visceral yolk sac  (IAGP)
failure of chorioallantoic fusion  (IAGP)
incomplete embryo turning  (IAGP)
increased heart weight  (IEA)
increased lean body mass  (IEA)
increased mean corpuscular volume  (IEA)
prenatal lethality, complete penetrance  (IAGP)
References

Additional References at PubMed
PMID:7671812   PMID:7983158   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15368895   PMID:15755804   PMID:16141072  
PMID:16141073   PMID:17507402   PMID:17920587   PMID:17967808   PMID:18287559   PMID:18794329   PMID:18799693   PMID:20103536   PMID:20678497   PMID:21267068   PMID:21565611   PMID:21873635  
PMID:22006950   PMID:28536193  


Genomics

Comparative Map Data
Epb41l5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391119,472,762 - 119,576,826 (-)NCBIGRCm39mm39
GRCm39 Ensembl1119,472,767 - 119,576,730 (-)Ensembl
GRCm381119,545,032 - 119,649,096 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1119,545,037 - 119,649,000 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,441,610 - 121,545,577 (-)NCBIGRCm37mm9NCBIm37
MGSCv361121,375,677 - 121,476,482 (-)NCBImm8
Celera1122,204,130 - 122,307,894 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
EPB41L5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2120,013,077 - 120,179,119 (+)EnsemblGRCh38hg38GRCh38
GRCh382120,013,032 - 120,179,119 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372120,770,653 - 120,936,695 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362120,487,139 - 120,653,165 (+)NCBINCBI36hg18NCBI36
Build 342120,486,898 - 120,652,924NCBI
Celera2114,097,494 - 114,263,547 (+)NCBI
Cytogenetic Map2q14.2NCBI
HuRef2113,095,033 - 113,261,073 (+)NCBIHuRef
CHM1_12120,775,048 - 120,941,099 (+)NCBICHM1_1
Epb41l5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21330,673,052 - 30,770,213 (-)NCBI
Rnor_6.0 Ensembl1335,580,098 - 35,668,968 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01335,622,472 - 35,673,449 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01340,736,725 - 40,787,937 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41332,373,377 - 32,426,745 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11332,376,201 - 32,429,569 (-)NCBI
Celera1330,609,949 - 30,662,208 (-)NCBICelera
Cytogenetic Map13q11NCBI
Epb41l5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554599,641,884 - 9,784,173 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554599,641,926 - 9,783,718 (-)NCBIChiLan1.0ChiLan1.0
EPB41L5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B120,521,139 - 120,687,209 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B120,521,145 - 120,687,209 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B6,945,289 - 7,111,595 (+)NCBIMhudiblu_PPA_v0panPan3
EPB41L5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11929,916,994 - 30,063,243 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1929,921,636 - 30,063,216 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1930,241,913 - 30,319,328 (-)NCBI
ROS_Cfam_1.01931,292,585 - 31,438,670 (-)NCBI
UMICH_Zoey_3.11930,047,561 - 30,124,750 (-)NCBI
UNSW_CanFamBas_1.01930,217,313 - 30,294,837 (-)NCBI
UU_Cfam_GSD_1.01931,402,865 - 31,477,654 (-)NCBI
Epb41l5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530391,174,199 - 91,288,156 (+)NCBI
SpeTri2.0NW_00493646950,329,564 - 50,443,532 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPB41L5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1531,159,217 - 31,295,896 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11531,159,214 - 31,295,891 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21536,469,281 - 36,530,372 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPB41L5
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11010,113,695 - 10,288,003 (-)NCBI
ChlSab1.1 Ensembl1010,121,075 - 10,287,954 (-)Ensembl
Epb41l5
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473224,908,711 - 25,088,246 (-)NCBI

Position Markers
RH136554  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,592,575 - 119,592,767UniSTSGRCm38
MGSCv371121,489,152 - 121,489,344UniSTSGRCm37
Celera1122,251,566 - 122,251,758UniSTS
Cytogenetic Map1E2.3UniSTS
RH127907  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,595,531 - 119,595,719UniSTSGRCm38
MGSCv371121,492,108 - 121,492,296UniSTSGRCm37
Celera1122,254,522 - 122,254,710UniSTS
Cytogenetic Map1E2.3UniSTS
MHAa21a5.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,557,680 - 119,557,879UniSTSGRCm38
MGSCv371121,454,257 - 121,454,456UniSTSGRCm37
Celera1122,216,785 - 122,216,984UniSTS
Cytogenetic Map1E2.3UniSTS
Whitehead_YAC1 UniSTS
D1Mit366  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,645,481 - 119,645,630UniSTSGRCm38
MGSCv371121,542,058 - 121,542,207UniSTSGRCm37
Celera1122,304,391 - 122,304,540UniSTS
Cytogenetic Map1E2.3UniSTS
cM Map163.1UniSTS
Whitehead Genetic166.7UniSTS
Whitehead/MRC_RH11618.02UniSTS
RH125378  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,548,736 - 119,548,989UniSTSGRCm38
MGSCv371121,445,313 - 121,445,566UniSTSGRCm37
Celera1122,207,833 - 122,208,086UniSTS
Cytogenetic Map1E2.3UniSTS
RH126768  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,630,837 - 119,631,062UniSTSGRCm38
MGSCv371121,527,414 - 121,527,639UniSTSGRCm37
Celera1122,289,765 - 122,289,990UniSTS
Cytogenetic Map1E2.3UniSTS
Whitehead/MRC_RH11609.82UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134721057150318120Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134721057150318120Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134721057150318120Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139093727126517573Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162907596120601949Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163880843153681816Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167300000129800000Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173716016147249632Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74477076148839837Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174952818133363199Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)176000000128600000Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)176000000148900000Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180267876126458780Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782314261147249632Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182665468135687641Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186556204120556204Mouse
4141329Mleu1_mmyeloid leukemia survival 1 (mouse)Not determined89858782123858782Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189858782123858782Mouse
1357760Synch3_msynechia 3 (mouse)Not determined192973712126973820Mouse
4141627Bwq7_mbody weight, QTL 7 (mouse)Not determined193013187124570059Mouse
12879491Hfnq1_mhair follicle number QTL 1 (mouse)193382588123709030Mouse
10045976Tir6_mtrypanosome infection response 6 (mouse)Not determined193609133120601949Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194200000148900000Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194200000172200000Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195600000162200000Mouse
1301123Cd8mts2_mCD8 memory T cell subset 2 (mouse)Not determined196690656130690827Mouse
1301753Tir3a_mtrypansomiasis infection response 3a (mouse)Not determined197126256131126460Mouse
13452398Leusq5_mleucocytosis susceptibility QTL 5 (mouse)198547060126458780Mouse
1301536Pbbcp1_mperipheral blood B cell percentage 1 (mouse)Not determined199579930133580115Mouse
1301193Lxw3_mlupus BXSB x NZW 3 (mouse)Not determined1103040804137040937Mouse
12879492Ecgnq1_meccrine gland number QTL 1 (mouse)1103350337120607496Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1104005680191493284Mouse
12790994Aaaq1_maortic arch angle QTL 1 (mouse)1109568206143568206Mouse
1301979Melm1_mmelanoma modifier 1 (mouse)Not determined1109710525143710742Mouse
1357600Obq17_mobesity QTL 17 (mouse)Not determined1110625442144625561Mouse
10401248Bglu12_mblood glucose level 12 (mouse)Not determined1110625442144625561Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112081092168358833Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112081092175641372Mouse
1301249Sbw1_msplenomegaly-NZB x NZW 1 (mouse)Not determined1112203268146203348Mouse
10045640Jckm4_mjuvenile cystic kidney modifier 4 (mouse)Not determined1116363098150363199Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117600000180000000Mouse
1302161Exq2_mexploratory and excitability QTL 2 (mouse)Not determined1118171982152172078Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3415
Count of miRNA genes:769
Interacting mature miRNAs:1013
Transcripts:ENSMUST00000027632, ENSMUST00000052404, ENSMUST00000163147
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001113416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC132393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY737035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000027632   ⟹   ENSMUSP00000027632
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,595,074 - 119,648,617 (-)Ensembl
RefSeq Acc Id: ENSMUST00000052404   ⟹   ENSMUSP00000058966
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,545,037 - 119,648,936 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163147   ⟹   ENSMUSP00000128374
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,548,131 - 119,648,934 (-)Ensembl
RefSeq Acc Id: ENSMUST00000185467
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,595,442 - 119,599,240 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187194   ⟹   ENSMUSP00000139683
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,621,951 - 119,648,624 (-)Ensembl
RefSeq Acc Id: ENSMUST00000187239
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,578,137 - 119,580,424 (-)Ensembl
RefSeq Acc Id: ENSMUST00000189042
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,617,655 - 119,634,000 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191046   ⟹   ENSMUSP00000140227
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,590,742 - 119,649,000 (-)Ensembl
RefSeq Acc Id: ENSMUST00000191162
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1119,554,227 - 119,600,305 (-)Ensembl
RefSeq Acc Id: NM_001113416   ⟹   NP_001106887
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,522,554 - 119,576,730 (-)NCBI
GRCm381119,594,824 - 119,649,000 (-)NCBI
MGSCv371121,441,610 - 121,545,577 (-)RGD
Celera1122,204,130 - 122,307,894 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_145506   ⟹   NP_663481
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,763 - 119,576,730 (-)NCBI
GRCm381119,545,033 - 119,649,000 (-)NCBI
MGSCv371121,441,610 - 121,545,577 (-)RGD
Celera1122,204,130 - 122,307,894 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529397   ⟹   XP_006529460
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,762 - 119,576,489 (-)NCBI
GRCm381119,545,032 - 119,648,760 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006529398   ⟹   XP_006529461
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,762 - 119,576,489 (-)NCBI
GRCm381119,545,032 - 119,648,761 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006529399   ⟹   XP_006529462
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,762 - 119,576,826 (-)NCBI
GRCm381119,545,032 - 119,649,096 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006529400   ⟹   XP_006529463
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,518,401 - 119,576,480 (-)NCBI
GRCm381119,590,671 - 119,648,752 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_663481   ⟸   NM_145506
- Peptide Label: isoform 1
- UniProtKB: Q8BGS1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001106887   ⟸   NM_001113416
- Peptide Label: isoform 2
- UniProtKB: Q8BGS1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529462   ⟸   XM_006529399
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006529460   ⟸   XM_006529397
- Peptide Label: isoform X1
- UniProtKB: Q8BGS1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529461   ⟸   XM_006529398
- Peptide Label: isoform X1
- UniProtKB: Q8BGS1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529463   ⟸   XM_006529400
- Peptide Label: isoform X3
- UniProtKB: Q8BGS1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000058966   ⟸   ENSMUST00000052404
RefSeq Acc Id: ENSMUSP00000027632   ⟸   ENSMUST00000027632
RefSeq Acc Id: ENSMUSP00000128374   ⟸   ENSMUST00000163147
RefSeq Acc Id: ENSMUSP00000140227   ⟸   ENSMUST00000191046
RefSeq Acc Id: ENSMUSP00000139683   ⟸   ENSMUST00000187194
Protein Domains
FERM

Promoters
RGD ID:6874716
Promoter ID:EPDNEW_M809
Type:single initiation site
Name:Epb41l5_2
Description:Mus musculus erythrocyte membrane protein band 4.1 like 5 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M810  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381119,648,631 - 119,648,691EPDNEW
RGD ID:6874718
Promoter ID:EPDNEW_M810
Type:initiation region
Name:Epb41l5_1
Description:Mus musculus erythrocyte membrane protein band 4.1 like 5 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M809  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381119,648,950 - 119,649,010EPDNEW
RGD ID:6817682
Promoter ID:MM_KWN:1883
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:NM_001113416,   NM_145506,   UC007CIX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,545,131 - 121,545,631 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:103006 AgrOrtholog
Ensembl Genes ENSMUSG00000026383 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000027632 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000058966 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000128374 UniProtKB/Swiss-Prot
  ENSMUSP00000139683 UniProtKB/TrEMBL
  ENSMUSP00000140227 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000027632 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000052404 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000163147 UniProtKB/Swiss-Prot
  ENSMUST00000187194 UniProtKB/TrEMBL
  ENSMUST00000191046 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.80.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
InterPro Band4.1-like5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Band_41_domain UniProtKB/Swiss-Prot
  Ez/rad/moesin-like UniProtKB/Swiss-Prot
  FERM-adjacent UniProtKB/Swiss-Prot
  FERM/acyl-CoA-bd_prot_sf UniProtKB/Swiss-Prot
  FERM_2 UniProtKB/Swiss-Prot
  FERM_central UniProtKB/Swiss-Prot
  FERM_CS UniProtKB/Swiss-Prot
  FERM_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:226352 UniProtKB/Swiss-Prot
MGD MGI:103006 ENTREZGENE
NCBI Gene 226352 ENTREZGENE
PANTHER PTHR23280:SF15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FERM_C UniProtKB/Swiss-Prot
  FERM_M UniProtKB/Swiss-Prot
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF08736 UniProtKB/Swiss-Prot
PhenoGen Epb41l5 PhenoGen
PRINTS BAND41 UniProtKB/Swiss-Prot
  ERMFAMILY UniProtKB/Swiss-Prot
PROSITE FERM_1 UniProtKB/Swiss-Prot
  FERM_2 UniProtKB/Swiss-Prot
  FERM_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART B41 UniProtKB/Swiss-Prot
  FERM_C UniProtKB/Swiss-Prot
  SM01195 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47031 UniProtKB/Swiss-Prot
  SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WP93_MOUSE UniProtKB/TrEMBL
  E41L5_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q8BT29_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3TJG0 UniProtKB/Swiss-Prot
  Q69ZG8 UniProtKB/Swiss-Prot
  Q8BSC9 UniProtKB/Swiss-Prot
  Q99KZ8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-10 Epb41l5  erythrocyte membrane protein band 4.1 like 5  E230025E14Rik  RIKEN cDNA E230025E14 gene  Data Merged 737654 PROVISIONAL
2015-09-01 Epb41l5  erythrocyte membrane protein band 4.1 like 5  Epb4.1l5  erythrocyte protein band 4.1 like 5  Symbol and/or name change 5135510 APPROVED
2015-05-26 Epb4.1l5  erythrocyte protein band 4.1 like 5    erythrocyte protein band 4.1-like 5  Symbol and/or name change 5135510 APPROVED