Epb41l5 (erythrocyte membrane protein band 4.1 like 5) - Rat Genome Database

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Gene: Epb41l5 (erythrocyte membrane protein band 4.1 like 5) Mus musculus
Analyze
Symbol: Epb41l5
Name: erythrocyte membrane protein band 4.1 like 5
RGD ID: 1322787
MGI Page MGI
Description: Enables protein domain specific binding activity. Involved in epithelial to mesenchymal transition. Acts upstream of or within several processes, including chordate embryonic development; embryonic foregut morphogenesis; and mesoderm morphogenesis. Located in focal adhesion and ruffle membrane. Is expressed in several structures, including foregut; lung; metanephros; neural tube; and primitive streak. Orthologous to human EPB41L5 (erythrocyte membrane protein band 4.1 like 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700030C16Rik; AL022914; band 4.1-like protein 5; BE37; E230025E14Rik; Epb4.1; Epb4.1l5; erythrocyte protein band 4.1 like 5; erythrocyte protein band 4.1-like 5; Lul; Lulu1; NB; NBL5; RIKEN cDNA E230025E14 gene
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm18706  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391119,472,762 - 119,576,826 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1119,472,767 - 119,576,730 (-)EnsemblGRCm39 Ensembl
GRCm381119,545,032 - 119,649,096 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1119,545,037 - 119,649,000 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,441,610 - 121,545,577 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361121,375,677 - 121,476,482 (-)NCBIMGSCv36mm8
Celera1122,204,130 - 122,307,894 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
cM Map152.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
all-trans-retinoic acid  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (EXP)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzo[ghi]perylene  (EXP)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP)
cisplatin  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
diarsenic trioxide  (EXP)
dibenz[a,h]anthracene  (EXP)
dicrotophos  (ISO)
dorsomorphin  (ISO)
Enterolactone  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
formaldehyde  (ISO)
geldanamycin  (ISO)
hydrogen peroxide  (ISO)
leflunomide  (ISO)
mercury dibromide  (ISO)
methapyrilene  (ISO)
N(4)-hydroxycytidine  (EXP)
N,N-diethyl-m-toluamide  (ISO)
N-ethyl-N-nitrosourea  (EXP)
nickel atom  (ISO)
ozone  (EXP)
panobinostat  (ISO)
paracetamol  (ISO)
paraquat  (ISO)
PCB138  (EXP)
permethrin  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP,ISO)
poly(I:C)  (ISO)
potassium chromate  (ISO)
progesterone  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
silver atom  (EXP)
silver(0)  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sunitinib  (ISO)
temozolomide  (ISO)
tetrachloromethane  (ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
urethane  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal cell nucleus morphology  (IAGP)
abnormal developmental patterning  (IAGP)
abnormal ectoderm development  (IAGP)
abnormal embryonic neuroepithelium morphology  (IAGP)
abnormal embryonic tissue morphology  (IAGP)
abnormal endoderm development  (IAGP)
abnormal extraembryonic tissue morphology  (IAGP)
abnormal foregut morphology  (IAGP)
abnormal germ layer development  (IAGP)
abnormal heart development  (IAGP)
abnormal mesoderm development  (IAGP)
abnormal neural plate morphology  (IAGP)
abnormal neural tube morphology  (IAGP)
abnormal primitive streak morphology  (IAGP)
abnormal retina morphology  (IEA)
abnormal rostral-caudal axis patterning  (IAGP)
abnormal rostral-caudal body axis extension  (IAGP)
abnormal somite development  (IAGP)
abnormal somite shape  (IAGP)
absent somites  (IAGP)
decreased axial mesoderm size  (IAGP)
decreased circulating glycerol level  (IEA)
decreased embryo size  (IAGP)
decreased paraxial mesoderm size  (IAGP)
embryonic growth arrest  (IAGP)
embryonic lethality between somite formation and embryo turning  (IAGP)
embryonic lethality between somite formation and embryo turning, complete penetrance  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
excessive folding of visceral yolk sac  (IAGP)
failure of chorioallantoic fusion  (IAGP)
incomplete embryo turning  (IAGP)
increased heart weight  (IEA)
increased lean body mass  (IEA)
increased mean corpuscular volume  (IEA)
prenatal lethality, complete penetrance  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7671812   PMID:7983158   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15368895   PMID:15755804   PMID:16141072  
PMID:16141073   PMID:17507402   PMID:17920587   PMID:17967808   PMID:18287559   PMID:18794329   PMID:18799693   PMID:20103536   PMID:20678497   PMID:21267068   PMID:21565611   PMID:21873635  
PMID:22006950   PMID:28536193   PMID:29592913   PMID:33761352   PMID:38355793  


Genomics

Comparative Map Data
Epb41l5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391119,472,762 - 119,576,826 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1119,472,767 - 119,576,730 (-)EnsemblGRCm39 Ensembl
GRCm381119,545,032 - 119,649,096 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1119,545,037 - 119,649,000 (-)EnsemblGRCm38mm10GRCm38
MGSCv371121,441,610 - 121,545,577 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361121,375,677 - 121,476,482 (-)NCBIMGSCv36mm8
Celera1122,204,130 - 122,307,894 (-)NCBICelera
Cytogenetic Map1E2.3NCBI
cM Map152.32NCBI
EPB41L5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382120,013,077 - 120,179,119 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2120,013,077 - 120,179,119 (+)EnsemblGRCh38hg38GRCh38
GRCh372120,770,653 - 120,936,695 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362120,487,139 - 120,653,165 (+)NCBINCBI36Build 36hg18NCBI36
Build 342120,486,898 - 120,652,924NCBI
Celera2114,097,494 - 114,263,547 (+)NCBICelera
Cytogenetic Map2q14.2NCBI
HuRef2113,095,033 - 113,261,073 (+)NCBIHuRef
CHM1_12120,775,048 - 120,941,099 (+)NCBICHM1_1
T2T-CHM13v2.02120,447,844 - 120,613,882 (+)NCBIT2T-CHM13v2.0
Epb41l5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81333,221,705 - 33,321,400 (-)NCBIGRCr8
mRatBN7.21330,670,792 - 30,770,213 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1330,669,764 - 30,768,360 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1333,252,174 - 33,349,643 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01334,540,015 - 34,637,481 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01331,814,092 - 31,911,557 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01335,622,472 - 35,673,449 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1335,580,098 - 35,668,968 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01340,736,725 - 40,787,937 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41332,373,377 - 32,426,745 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11332,376,201 - 32,429,569 (-)NCBI
Celera1330,609,949 - 30,662,208 (-)NCBICelera
Cytogenetic Map13q11NCBI
Epb41l5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554599,641,884 - 9,784,173 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554599,641,926 - 9,783,718 (-)NCBIChiLan1.0ChiLan1.0
EPB41L5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21322,011,547 - 22,180,955 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B22,026,559 - 22,195,925 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B6,945,289 - 7,111,595 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B120,521,139 - 120,687,209 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B120,521,145 - 120,687,209 (+)Ensemblpanpan1.1panPan2
EPB41L5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11929,916,994 - 30,063,243 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1929,921,636 - 30,063,216 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1930,241,913 - 30,319,328 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01931,292,585 - 31,438,670 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1931,295,033 - 31,438,663 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11930,047,561 - 30,124,750 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01930,217,313 - 30,294,837 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01931,402,865 - 31,477,654 (-)NCBIUU_Cfam_GSD_1.0
Epb41l5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530391,174,199 - 91,288,156 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646950,329,409 - 50,443,626 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646950,329,564 - 50,443,532 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPB41L5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1531,159,223 - 31,295,893 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11531,159,214 - 31,295,891 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21536,469,281 - 36,530,372 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPB41L5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11010,113,695 - 10,288,003 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1010,121,075 - 10,287,954 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606112,405,079 - 12,570,511 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Epb41l5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473224,908,723 - 25,088,244 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473224,908,711 - 25,088,246 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Epb41l5
4867 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3415
Count of miRNA genes:769
Interacting mature miRNAs:1013
Transcripts:ENSMUST00000027632, ENSMUST00000052404, ENSMUST00000163147
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189786512123786512Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
12879492Ecgnq1_meccrine gland number QTL 1 (mouse)1103278062120535225Mouse
10045976Tir6_mtrypanosome infection response 6 (mouse)Not determined193536855120529678Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
1302161Exq2_mexploratory and excitability QTL 2 (mouse)Not determined1118099720152099816Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174991977133290937Mouse
4141627Bwq7_mbody weight, QTL 7 (mouse)Not determined192940909124497796Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
12879491Hfnq1_mhair follicle number QTL 1 (mouse)193310310123636759Mouse
1301979Melm1_mmelanoma modifier 1 (mouse)Not determined1109638262143638479Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186483929120483929Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139132808126445310Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112008822168186402Mouse
1301123Cd8mts2_mCD8 memory T cell subset 2 (mouse)Not determined196618386130618557Mouse
12790994Aaaq1_maortic arch angle QTL 1 (mouse)1109495943143495943Mouse
10045640Jckm4_mjuvenile cystic kidney modifier 4 (mouse)Not determined1116290836150290937Mouse
1301249Sbw1_msplenomegaly-NZB x NZW 1 (mouse)Not determined1112131005146131085Mouse
1357760Synch3_msynechia 3 (mouse)Not determined192901442126901550Mouse
1301193Lxw3_mlupus BXSB x NZW 3 (mouse)Not determined1102968534136968667Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
13452398Leusq5_mleucocytosis susceptibility QTL 5 (mouse)198474785126386517Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)175976637128527737Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180245593126386517Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162946755120529678Mouse
1301753Tir3a_mtrypansomiasis infection response 3a (mouse)Not determined197053986131054190Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182643189135615379Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
4141329Mleu1_mmyeloid leukemia survival 1 (mouse)Not determined89786512123786512Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167339159129727737Mouse
1301536Pbbcp1_mperipheral blood B cell percentage 1 (mouse)Not determined199507660133507845Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194127725148775742Mouse
1357600Obq17_mobesity QTL 17 (mouse)Not determined1110553179144553298Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
10401248Bglu12_mblood glucose level 12 (mouse)Not determined1110553179144553298Mouse

Markers in Region
RH136554  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,592,575 - 119,592,767UniSTSGRCm38
MGSCv371121,489,152 - 121,489,344UniSTSGRCm37
Celera1122,251,566 - 122,251,758UniSTS
Cytogenetic Map1E2.3UniSTS
RH127907  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,595,531 - 119,595,719UniSTSGRCm38
MGSCv371121,492,108 - 121,492,296UniSTSGRCm37
Celera1122,254,522 - 122,254,710UniSTS
Cytogenetic Map1E2.3UniSTS
MHAa21a5.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,557,680 - 119,557,879UniSTSGRCm38
MGSCv371121,454,257 - 121,454,456UniSTSGRCm37
Celera1122,216,785 - 122,216,984UniSTS
Cytogenetic Map1E2.3UniSTS
Whitehead_YAC1 UniSTS
D1Mit366  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,645,481 - 119,645,630UniSTSGRCm38
MGSCv371121,542,058 - 121,542,207UniSTSGRCm37
Celera1122,304,391 - 122,304,540UniSTS
Cytogenetic Map1E2.3UniSTS
cM Map163.1UniSTS
Whitehead Genetic166.7UniSTS
Whitehead/MRC_RH11618.02UniSTS
RH125378  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,548,736 - 119,548,989UniSTSGRCm38
MGSCv371121,445,313 - 121,445,566UniSTSGRCm37
Celera1122,207,833 - 122,208,086UniSTS
Cytogenetic Map1E2.3UniSTS
RH126768  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381119,630,837 - 119,631,062UniSTSGRCm38
MGSCv371121,527,414 - 121,527,639UniSTSGRCm37
Celera1122,289,765 - 122,289,990UniSTS
Cytogenetic Map1E2.3UniSTS
Whitehead/MRC_RH11609.82UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001113416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_145506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC132393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK027983 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK034676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK037024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK173198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY737035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000027632   ⟹   ENSMUSP00000027632
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,522,804 - 119,576,347 (-)Ensembl
GRCm38.p6 Ensembl1119,595,074 - 119,648,617 (-)Ensembl
Ensembl Acc Id: ENSMUST00000052404   ⟹   ENSMUSP00000058966
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,472,767 - 119,576,666 (-)Ensembl
GRCm38.p6 Ensembl1119,545,037 - 119,648,936 (-)Ensembl
Ensembl Acc Id: ENSMUST00000163147   ⟹   ENSMUSP00000128374
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,475,861 - 119,576,664 (-)Ensembl
GRCm38.p6 Ensembl1119,548,131 - 119,648,934 (-)Ensembl
Ensembl Acc Id: ENSMUST00000185467
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,523,172 - 119,526,970 (-)Ensembl
GRCm38.p6 Ensembl1119,595,442 - 119,599,240 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187194   ⟹   ENSMUSP00000139683
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,549,681 - 119,576,354 (-)Ensembl
GRCm38.p6 Ensembl1119,621,951 - 119,648,624 (-)Ensembl
Ensembl Acc Id: ENSMUST00000187239
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,505,867 - 119,508,154 (-)Ensembl
GRCm38.p6 Ensembl1119,578,137 - 119,580,424 (-)Ensembl
Ensembl Acc Id: ENSMUST00000189042
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,545,385 - 119,561,730 (-)Ensembl
GRCm38.p6 Ensembl1119,617,655 - 119,634,000 (-)Ensembl
Ensembl Acc Id: ENSMUST00000191046   ⟹   ENSMUSP00000140227
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,518,472 - 119,576,730 (-)Ensembl
GRCm38.p6 Ensembl1119,590,742 - 119,649,000 (-)Ensembl
Ensembl Acc Id: ENSMUST00000191162
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1119,481,957 - 119,528,035 (-)Ensembl
GRCm38.p6 Ensembl1119,554,227 - 119,600,305 (-)Ensembl
RefSeq Acc Id: NM_001113416   ⟹   NP_001106887
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,522,554 - 119,576,730 (-)NCBI
GRCm381119,594,824 - 119,649,000 (-)NCBI
MGSCv371121,441,610 - 121,545,577 (-)RGD
Celera1122,204,130 - 122,307,894 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_145506   ⟹   NP_663481
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,763 - 119,576,730 (-)NCBI
GRCm381119,545,033 - 119,649,000 (-)NCBI
MGSCv371121,441,610 - 121,545,577 (-)RGD
Celera1122,204,130 - 122,307,894 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529397   ⟹   XP_006529460
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,762 - 119,576,489 (-)NCBI
GRCm381119,545,032 - 119,648,760 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006529398   ⟹   XP_006529461
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,762 - 119,576,489 (-)NCBI
GRCm381119,545,032 - 119,648,761 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006529399   ⟹   XP_006529462
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,472,762 - 119,576,826 (-)NCBI
GRCm381119,545,032 - 119,649,096 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006529400   ⟹   XP_006529463
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391119,518,401 - 119,576,480 (-)NCBI
GRCm381119,590,671 - 119,648,752 (-)NCBI
Sequence:
RefSeq Acc Id: NP_663481   ⟸   NM_145506
- Peptide Label: isoform 1
- UniProtKB: Q99KZ8 (UniProtKB/Swiss-Prot),   Q8BSC9 (UniProtKB/Swiss-Prot),   Q8BGS1 (UniProtKB/Swiss-Prot),   Q69ZG8 (UniProtKB/Swiss-Prot),   Q3TJG0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001106887   ⟸   NM_001113416
- Peptide Label: isoform 2
- UniProtKB: Q8BGS1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529462   ⟸   XM_006529399
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006529460   ⟸   XM_006529397
- Peptide Label: isoform X1
- UniProtKB: Q99KZ8 (UniProtKB/Swiss-Prot),   Q8BSC9 (UniProtKB/Swiss-Prot),   Q8BGS1 (UniProtKB/Swiss-Prot),   Q69ZG8 (UniProtKB/Swiss-Prot),   Q3TJG0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529461   ⟸   XM_006529398
- Peptide Label: isoform X1
- UniProtKB: Q99KZ8 (UniProtKB/Swiss-Prot),   Q8BSC9 (UniProtKB/Swiss-Prot),   Q8BGS1 (UniProtKB/Swiss-Prot),   Q69ZG8 (UniProtKB/Swiss-Prot),   Q3TJG0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006529463   ⟸   XM_006529400
- Peptide Label: isoform X3
- UniProtKB: Q8BGS1 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000058966   ⟸   ENSMUST00000052404
Ensembl Acc Id: ENSMUSP00000027632   ⟸   ENSMUST00000027632
Ensembl Acc Id: ENSMUSP00000128374   ⟸   ENSMUST00000163147
Ensembl Acc Id: ENSMUSP00000140227   ⟸   ENSMUST00000191046
Ensembl Acc Id: ENSMUSP00000139683   ⟸   ENSMUST00000187194
Protein Domains
FERM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8BGS1-F1-model_v2 AlphaFold Q8BGS1 1-731 view protein structure

Promoters
RGD ID:6874716
Promoter ID:EPDNEW_M809
Type:single initiation site
Name:Epb41l5_2
Description:Mus musculus erythrocyte membrane protein band 4.1 like 5 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M810  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381119,648,631 - 119,648,691EPDNEW
RGD ID:6874718
Promoter ID:EPDNEW_M810
Type:initiation region
Name:Epb41l5_1
Description:Mus musculus erythrocyte membrane protein band 4.1 like 5 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M809  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381119,648,950 - 119,649,010EPDNEW
RGD ID:6817682
Promoter ID:MM_KWN:1883
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   ES_Cell,   Kidney,   Liver,   Lung
Transcripts:NM_001113416,   NM_145506,   UC007CIX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361121,545,131 - 121,545,631 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:103006 AgrOrtholog
Ensembl Genes ENSMUSG00000026383 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027632 ENTREZGENE
  ENSMUST00000027632.14 UniProtKB/Swiss-Prot
  ENSMUST00000052404 ENTREZGENE
  ENSMUST00000052404.13 UniProtKB/Swiss-Prot
  ENSMUST00000163147.8 UniProtKB/Swiss-Prot
  ENSMUST00000187194.2 UniProtKB/TrEMBL
  ENSMUST00000191046 ENTREZGENE
  ENSMUST00000191046.7 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.80.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
InterPro Band_41_domain UniProtKB/Swiss-Prot
  Ez/rad/moesin-like UniProtKB/Swiss-Prot
  FERM-adjacent UniProtKB/Swiss-Prot
  FERM/acyl-CoA-bd_prot_sf UniProtKB/Swiss-Prot
  FERM_2 UniProtKB/Swiss-Prot
  FERM_central UniProtKB/Swiss-Prot
  FERM_CS UniProtKB/Swiss-Prot
  FERM_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:226352 UniProtKB/Swiss-Prot
MGD MGI:103006 ENTREZGENE
NCBI Gene Epb41l5 ENTREZGENE
PANTHER 4.1 G PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23280:SF15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FERM_C UniProtKB/Swiss-Prot
  FERM_M UniProtKB/Swiss-Prot
  FERM_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PF08736 UniProtKB/Swiss-Prot
PhenoGen Epb41l5 PhenoGen
PRINTS BAND41 UniProtKB/Swiss-Prot
  ERMFAMILY UniProtKB/Swiss-Prot
PROSITE FERM_1 UniProtKB/Swiss-Prot
  FERM_2 UniProtKB/Swiss-Prot
  FERM_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART B41 UniProtKB/Swiss-Prot
  FERM_C UniProtKB/Swiss-Prot
  SM01195 UniProtKB/Swiss-Prot
Superfamily-SCOP PH domain-like UniProtKB/Swiss-Prot
  SSF47031 UniProtKB/Swiss-Prot
  SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WP93_MOUSE UniProtKB/TrEMBL
  E41L5_MOUSE UniProtKB/Swiss-Prot
  Q3TJG0 ENTREZGENE
  Q69ZG8 ENTREZGENE
  Q8BGS1 ENTREZGENE
  Q8BSC9 ENTREZGENE
  Q8BT29_MOUSE UniProtKB/TrEMBL
  Q99KZ8 ENTREZGENE
UniProt Secondary Q3TJG0 UniProtKB/Swiss-Prot
  Q69ZG8 UniProtKB/Swiss-Prot
  Q8BSC9 UniProtKB/Swiss-Prot
  Q99KZ8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2024-08-26 Epb41l5  erythrocyte membrane protein band 4.1 like 5  Epb4.1l5  erythrocyte protein band 4.1-like 5  Symbol and/or name updated 27372883 PROVISIONAL
2024-08-21 Epb4.1l5  erythrocyte protein band 4.1-like 5  Epb41l5  erythrocyte membrane protein band 4.1 like 5  Symbol and/or name change 5135510 APPROVED
2016-03-10 Epb41l5  erythrocyte membrane protein band 4.1 like 5  E230025E14Rik  RIKEN cDNA E230025E14 gene  Data merged from RGD:1607719 737654 PROVISIONAL
2015-09-01 Epb41l5  erythrocyte membrane protein band 4.1 like 5  Epb4.1l5  erythrocyte protein band 4.1 like 5  Symbol and/or name change 5135510 APPROVED
2015-05-26 Epb4.1l5  erythrocyte protein band 4.1 like 5    erythrocyte protein band 4.1-like 5  Symbol and/or name change 5135510 APPROVED