Camta2 (calmodulin binding transcription activator 2) - Rat Genome Database

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Gene: Camta2 (calmodulin binding transcription activator 2) Mus musculus
Analyze
Symbol: Camta2
Name: calmodulin binding transcription activator 2
RGD ID: 1322679
MGI Page MGI
Description: Exhibits sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to localize to chromatin and nucleus. Is expressed in brain and spinal cord. Orthologous to human CAMTA2 (calmodulin binding transcription activator 2); INTERACTS WITH 1,2-dimethylhydrazine; 2,3',4,4',5-Pentachlorobiphenyl; aflatoxin B1.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: calmodulin-binding transcription activator 2; Kiaa0909-hp; mKIAA0909; RP23-326P7.7
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,560,288 - 70,578,966 (-)NCBIGRCm39mm39
GRCm39 Ensembl1170,560,289 - 70,578,931 (-)Ensembl
GRCm381170,669,463 - 70,688,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,669,463 - 70,688,105 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,482,968 - 70,501,436 (-)NCBIGRCm37mm9NCBIm37
MGSCv361170,485,661 - 70,504,129 (-)NCBImm8
Celera1178,220,399 - 78,238,873 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1143.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromatin  (ISO)
nucleus  (IBA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11318612   PMID:11544199   PMID:12477932   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16678093   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24952961   PMID:25049392   PMID:27063791  


Genomics

Comparative Map Data
Camta2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,560,288 - 70,578,966 (-)NCBIGRCm39mm39
GRCm39 Ensembl1170,560,289 - 70,578,931 (-)Ensembl
GRCm381170,669,463 - 70,688,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,669,463 - 70,688,105 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,482,968 - 70,501,436 (-)NCBIGRCm37mm9NCBIm37
MGSCv361170,485,661 - 70,504,129 (-)NCBImm8
Celera1178,220,399 - 78,238,873 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1143.21NCBI
CAMTA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl174,967,992 - 4,987,675 (-)EnsemblGRCh38hg38GRCh38
GRCh38174,967,993 - 4,988,281 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37174,871,292 - 4,890,970 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36174,812,017 - 4,831,655 (-)NCBINCBI36hg18NCBI36
Build 34174,812,016 - 4,831,655NCBI
Celera174,886,098 - 4,905,775 (-)NCBI
Cytogenetic Map17p13.2NCBI
HuRef174,758,910 - 4,778,803 (-)NCBIHuRef
CHM1_1174,880,598 - 4,900,277 (-)NCBICHM1_1
Camta2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21055,383,450 - 55,401,838 (-)NCBI
Rnor_6.0 Ensembl1057,291,192 - 57,309,298 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01057,291,192 - 57,309,638 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01057,036,786 - 57,055,094 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,549,855 - 57,567,958 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11057,563,476 - 57,581,579 (-)NCBI
Celera1054,529,008 - 54,547,113 (-)NCBICelera
Cytogenetic Map10q24NCBI
Camta2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546710,375,017 - 10,392,363 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546710,375,017 - 10,391,546 (-)NCBIChiLan1.0ChiLan1.0
CAMTA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1175,003,898 - 5,024,036 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl175,004,607 - 5,024,238 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0175,016,065 - 5,036,216 (-)NCBIMhudiblu_PPA_v0panPan3
CAMTA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1531,632,064 - 31,657,537 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl531,631,838 - 31,657,792 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha531,781,327 - 31,795,878 (+)NCBI
ROS_Cfam_1.0531,746,735 - 31,761,285 (+)NCBI
UMICH_Zoey_3.1531,713,272 - 31,727,822 (+)NCBI
UNSW_CanFamBas_1.0531,673,027 - 31,687,545 (+)NCBI
UU_Cfam_GSD_1.0531,849,362 - 31,863,912 (+)NCBI
Camta2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560253,153,567 - 53,168,758 (-)NCBI
SpeTri2.0NW_0049366772,732,223 - 2,747,408 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMTA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1251,931,802 - 51,953,585 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11251,931,794 - 51,948,703 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,000,816 - 54,017,405 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CAMTA2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1164,448,126 - 4,468,616 (-)NCBI
ChlSab1.1 Ensembl164,447,849 - 4,467,159 (-)Ensembl
Camta2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247868,820,062 - 8,836,711 (-)NCBI

Position Markers
AI842396  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,688,533 - 70,688,668UniSTSGRCm38
MGSCv371170,502,035 - 70,502,170UniSTSGRCm37
Celera1178,239,472 - 78,239,607UniSTS
Cytogenetic Map11B3UniSTS
cM Map1142.0UniSTS
Whitehead/MRC_RH11907.48UniSTS
D11Die6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,687,357 - 70,687,506UniSTSGRCm38
MGSCv371170,500,859 - 70,501,008UniSTSGRCm37
Celera1178,238,296 - 78,238,445UniSTS
Cytogenetic Map11B3UniSTS
cM Map11 UniSTS
MARC_6523-6524:992007271:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,670,647 - 70,671,559UniSTSGRCm38
MGSCv371170,484,149 - 70,485,061UniSTSGRCm37
Celera1178,221,580 - 78,222,492UniSTS
Cytogenetic Map11B3UniSTS
cM Map1142.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116179599488808902Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116226517996265327Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162700000109500000Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116342858181939647Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116342858194173092Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116493951098939647Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116493951098939647Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116493951098939647Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166842594100842826Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166842594100842826Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66842594100842826Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166842594100842826Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166842594100842826Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166842594100842826Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116718736579923086Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168300000102000000Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116910000072600000Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116910000072600000Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116910000072600000Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116910000072600000Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116910000072600000Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116910000072600000Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116910000072600000Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116910000072600000Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116910000072600000Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116910000072600000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4662
Count of miRNA genes:761
Interacting mature miRNAs:1029
Transcripts:ENSMUST00000036299, ENSMUST00000100933, ENSMUST00000108544, ENSMUST00000108545, ENSMUST00000119120, ENSMUST00000120261, ENSMUST00000125687, ENSMUST00000145823, ENSMUST00000150224
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001190376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001779953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK039670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB856280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000036299   ⟹   ENSMUSP00000043792
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,463 - 70,687,953 (-)Ensembl
RefSeq Acc Id: ENSMUST00000100933   ⟹   ENSMUSP00000098493
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,463 - 70,687,972 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108544   ⟹   ENSMUSP00000104184
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,463 - 70,688,105 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108545   ⟹   ENSMUSP00000104185
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,463 - 70,687,943 (-)Ensembl
RefSeq Acc Id: ENSMUST00000119120   ⟹   ENSMUSP00000113847
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,464 - 70,687,955 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120261   ⟹   ENSMUSP00000113667
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,463 - 70,687,943 (-)Ensembl
RefSeq Acc Id: ENSMUST00000125687
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,466 - 70,683,776 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145823   ⟹   ENSMUSP00000123602
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,669,463 - 70,686,389 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150224
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1170,685,914 - 70,687,948 (-)Ensembl
RefSeq Acc Id: NM_001190376   ⟹   NP_001177305
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190378   ⟹   NP_001177307
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190379   ⟹   NP_001177308
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001364103   ⟹   NP_001351032
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,356 (-)NCBI
GRCm381170,669,463 - 70,687,530 (-)NCBI
Sequence:
RefSeq Acc Id: NM_178116   ⟹   NP_835217
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
MGSCv371170,482,968 - 70,501,436 (-)RGD
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532918   ⟹   XP_006532981
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,676 (-)NCBI
GRCm381170,669,466 - 70,687,853 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532919   ⟹   XP_006532982
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,966 (-)NCBI
GRCm381170,669,466 - 70,688,145 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532920   ⟹   XP_006532983
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,676 (-)NCBI
GRCm381170,669,466 - 70,687,853 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532923   ⟹   XP_006532986
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,294 - 70,578,675 (-)NCBI
GRCm381170,669,466 - 70,687,852 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532924   ⟹   XP_006532987
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,964 (-)NCBI
GRCm381170,669,466 - 70,688,142 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245829   ⟹   XP_030101689
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,966 (-)NCBI
GRCm381170,669,466 - 70,688,145 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245830   ⟹   XP_030101690
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,962 (-)NCBI
GRCm381170,669,466 - 70,688,139 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245831   ⟹   XP_030101691
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,962 (-)NCBI
GRCm381170,669,466 - 70,688,139 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001779953
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,676 (-)NCBI
GRCm381170,669,466 - 70,687,853 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879581
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,687 (-)NCBI
GRCm381170,669,466 - 70,687,863 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_835217   ⟸   NM_178116
- Peptide Label: isoform 1
- UniProtKB: Q80Y50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001177308   ⟸   NM_001190379
- Peptide Label: isoform 4
- UniProtKB: Q80Y50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001177307   ⟸   NM_001190378
- Peptide Label: isoform 3
- UniProtKB: B0QZH4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177305   ⟸   NM_001190376
- Peptide Label: isoform 2
- UniProtKB: Q80Y50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532987   ⟸   XM_006532924
- Peptide Label: isoform X6
- UniProtKB: B0QZH6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532986   ⟸   XM_006532923
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006532982   ⟸   XM_006532919
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006532983   ⟸   XM_006532920
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006532981   ⟸   XM_006532918
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001351032   ⟸   NM_001364103
- Peptide Label: isoform 5
RefSeq Acc Id: XP_030101689   ⟸   XM_030245829
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030101691   ⟸   XM_030245831
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030101690   ⟸   XM_030245830
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000113847   ⟸   ENSMUST00000119120
RefSeq Acc Id: ENSMUSP00000104184   ⟸   ENSMUST00000108544
RefSeq Acc Id: ENSMUSP00000104185   ⟸   ENSMUST00000108545
RefSeq Acc Id: ENSMUSP00000123602   ⟸   ENSMUST00000145823
RefSeq Acc Id: ENSMUSP00000043792   ⟸   ENSMUST00000036299
RefSeq Acc Id: ENSMUSP00000113667   ⟸   ENSMUST00000120261
RefSeq Acc Id: ENSMUSP00000098493   ⟸   ENSMUST00000100933
Protein Domains
ANK_REP_REGION   CG-1   IPT/TIG   IQ

Promoters
RGD ID:6820519
Promoter ID:MM_KWN:8247
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Spleen
Transcripts:OTTMUST00000013670
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,497,049 - 70,497,549 (-)MPROMDB
RGD ID:6821308
Promoter ID:MM_KWN:8248
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour
Transcripts:UC007JWB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,500,521 - 70,501,021 (-)MPROMDB
RGD ID:6820518
Promoter ID:MM_KWN:8249
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000054733,   ENSMUST00000108544,   ENSMUST00000119120,   ENSMUST00000120261,   OTTMUST00000013671,   OTTMUST00000013673,   OTTMUST00000013675,   OTTMUST00000073565
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,501,401 - 70,502,062 (-)MPROMDB
RGD ID:8675362
Promoter ID:EPDNEW_M15711
Type:initiation region
Name:Camta2_2
Description:Mus musculus calmodulin binding transcription activator 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15712  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381170,686,450 - 70,686,510EPDNEW
RGD ID:8675364
Promoter ID:EPDNEW_M15712
Type:initiation region
Name:Camta2_1
Description:Mus musculus calmodulin binding transcription activator 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15711  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381170,687,925 - 70,687,985EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2135957 AgrOrtholog
Ensembl Genes ENSMUSG00000040712 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000043792 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000098493 UniProtKB/Swiss-Prot
  ENSMUSP00000104184 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000104185 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000113667 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000113847 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000123602 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000036299 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000100933 UniProtKB/Swiss-Prot
  ENSMUST00000108544 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000108545 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000119120 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000120261 UniProtKB/TrEMBL
  ENSMUST00000125687 ENTREZGENE
  ENSMUST00000145823 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt-contain_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Camta2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CG-1_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_E-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IPT_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report mmu:216874 UniProtKB/Swiss-Prot
MGD MGI:2135957 ENTREZGENE
NCBI Gene 216874 ENTREZGENE
PANTHER PTHR23335:SF9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CG-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Camta2 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CG_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50096 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CG-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00015 UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
  SSF81296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B0QZH4 ENTREZGENE, UniProtKB/TrEMBL
  B0QZH6 ENTREZGENE, UniProtKB/TrEMBL
  CMTA2_MOUSE UniProtKB/Swiss-Prot
  D6RCU2_MOUSE UniProtKB/TrEMBL
  Q80Y50 ENTREZGENE
UniProt Secondary B0QZH5 UniProtKB/Swiss-Prot
  Q3TFK0 UniProtKB/Swiss-Prot
  Q5SX54 UniProtKB/Swiss-Prot
  Q5SX68 UniProtKB/Swiss-Prot
  Q6PHS5 UniProtKB/Swiss-Prot
  Q80TP1 UniProtKB/Swiss-Prot
  Q8R0D9 UniProtKB/Swiss-Prot
  Q8R2N5 UniProtKB/Swiss-Prot