Camta2 (calmodulin binding transcription activator 2) - Rat Genome Database

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Gene: Camta2 (calmodulin binding transcription activator 2) Mus musculus
Analyze
Symbol: Camta2
Name: calmodulin binding transcription activator 2
RGD ID: 1322679
MGI Page MGI
Description: Enables sequence-specific DNA binding activity. Involved in positive regulation of transcription by RNA polymerase II. Predicted to be part of chromatin. Predicted to be active in nucleus. Is expressed in several structures, including brain; eye; foregut; male reproductive gland or organ; and urinary system. Orthologous to human CAMTA2 (calmodulin binding transcription activator 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: calmodulin-binding transcription activator 2; Kiaa0909-hp; mKIAA0909; RP23-326P7.7
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,560,288 - 70,578,966 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,560,289 - 70,578,931 (-)EnsemblGRCm39 Ensembl
GRCm381170,669,463 - 70,688,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,669,463 - 70,688,105 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,482,968 - 70,501,436 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361170,485,661 - 70,504,129 (-)NCBIMGSCv36mm8
Celera1178,220,399 - 78,238,873 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1143.21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromatin  (ISO)
nucleus  (IBA,ISO)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Mouse MP Annotation Import Pipeline RGD automated import pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11318612   PMID:11544199   PMID:12477932   PMID:15489334   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:16678093   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24194600   PMID:24952961   PMID:25049392   PMID:27063791  


Genomics

Comparative Map Data
Camta2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,560,288 - 70,578,966 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1170,560,289 - 70,578,931 (-)EnsemblGRCm39 Ensembl
GRCm381170,669,463 - 70,688,145 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1170,669,463 - 70,688,105 (-)EnsemblGRCm38mm10GRCm38
MGSCv371170,482,968 - 70,501,436 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361170,485,661 - 70,504,129 (-)NCBIMGSCv36mm8
Celera1178,220,399 - 78,238,873 (-)NCBICelera
Cytogenetic Map11B3NCBI
cM Map1143.21NCBI
CAMTA2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38174,967,997 - 4,987,675 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl174,967,992 - 4,987,675 (-)EnsemblGRCh38hg38GRCh38
GRCh37174,871,292 - 4,890,970 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36174,812,017 - 4,831,655 (-)NCBINCBI36Build 36hg18NCBI36
Build 34174,812,016 - 4,831,655NCBI
Celera174,886,098 - 4,905,775 (-)NCBICelera
Cytogenetic Map17p13.2NCBI
HuRef174,758,910 - 4,778,803 (-)NCBIHuRef
CHM1_1174,880,598 - 4,900,277 (-)NCBICHM1_1
T2T-CHM13v2.0174,858,321 - 4,878,006 (-)NCBIT2T-CHM13v2.0
Camta2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81055,882,071 - 55,900,575 (-)NCBIGRCr8
mRatBN7.21055,383,450 - 55,401,838 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1055,383,450 - 55,401,558 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1060,064,109 - 60,082,109 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01059,552,616 - 59,570,616 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01055,051,723 - 55,069,723 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01057,291,192 - 57,309,638 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1057,291,192 - 57,309,298 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01057,036,786 - 57,055,094 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41057,549,855 - 57,567,958 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11057,563,476 - 57,581,579 (-)NCBI
Celera1054,529,008 - 54,547,113 (-)NCBICelera
Cytogenetic Map10q24NCBI
Camta2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546710,375,017 - 10,392,363 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546710,375,017 - 10,391,546 (-)NCBIChiLan1.0ChiLan1.0
CAMTA2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21912,577,938 - 12,598,550 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11714,546,302 - 14,566,459 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0175,016,065 - 5,036,216 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1175,003,898 - 5,024,036 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl175,004,607 - 5,024,238 (-)Ensemblpanpan1.1panPan2
CAMTA2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1531,632,064 - 31,657,537 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl531,631,838 - 31,657,792 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha531,781,327 - 31,795,878 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0531,746,735 - 31,761,285 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl531,747,049 - 31,761,286 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1531,713,272 - 31,727,822 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0531,673,027 - 31,687,545 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0531,849,362 - 31,863,912 (+)NCBIUU_Cfam_GSD_1.0
Camta2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560253,153,567 - 53,168,758 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366772,730,874 - 2,747,406 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366772,732,223 - 2,747,408 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CAMTA2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1251,931,802 - 51,948,705 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11251,931,794 - 51,948,703 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21254,000,816 - 54,017,405 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CAMTA2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1164,448,126 - 4,468,616 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl164,447,849 - 4,467,159 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605917,163,552 - 17,184,382 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Camta2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247868,820,170 - 8,836,703 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247868,820,062 - 8,836,711 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Camta2
1 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:4662
Count of miRNA genes:761
Interacting mature miRNAs:1029
Transcripts:ENSMUST00000036299, ENSMUST00000100933, ENSMUST00000108544, ENSMUST00000108545, ENSMUST00000119120, ENSMUST00000120261, ENSMUST00000125687, ENSMUST00000145823, ENSMUST00000150224
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115007819184078411Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115249438586494385Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115339058887390737Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115412675283733652Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5528498572209927Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156864027114157957Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115775466091754758Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115849055574754758Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15850803087695238Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5871926685066529Mouse
1301987Pid3_mprior incubation determinant 3 (mouse)Not determined116168682088699728Mouse
1301319Dautb4_mdopamine uptake transporter binding 4 (mouse)Not determined116215600596156153Mouse
27226730Tibmd1_mtibia midshaft diameter 1, 5 week (mouse)1162590826109390826Mouse
1301999Lmr15_mleishmaniasis resistance 15 (mouse)Not determined116331940781830473Mouse
10044004Stzid3_mstreptozotocin induced diabetes susceptibility 3 (mouse)Not determined116331940794063918Mouse
11039502Ltpr6b_mLeishmania tropica response 6b (mouse)116483033698830473Mouse
11039501Ltpr6a_mLeishmania tropica response 6a (mouse)116483033698830473Mouse
11039515Ltpr6_mLeishmania tropica response 6 (mouse)116483033698830473Mouse
1357766Si5lq6_mserum IGFBP-5 level QTL 6 (mouse)Not determined1166733420100733652Mouse
1301546Pcir2_mperiosteal circumference 2 (mouse)Not determined1166733420100733652Mouse
1301833Tbbmd5_mtotal body bone mineral density 5 (mouse)Not determined1166733420100733652Mouse
1300628Lgth6_mbody length 6 (mouse)Not determined1166733420100733652Mouse
4141012Femwf6_mfemur work to failure 6 (mouse)Not determined66733420100733652Mouse
1300784Prdt3_mprion disease incubation time 3 (mouse)Not determined1166733420100733652Mouse
4142316Ity2b_mimmunity to S. typhimurium 2b (mouse)Not determined116707819179813912Mouse
27226783Tibl5_mtibia length 5, 5 week (mouse)1168190826101890826Mouse
36049778Ars6_mantibody response to SARS-CoV 6, day 15, IgM (mouse)116899082672490826Mouse
36049779Ars7_mantibody response to SARS-CoV 7, day 29, IgG1 (mouse)116899082672490826Mouse
36049784Ars8_mantibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049785Ars9_mantibody response to SARS-CoV 9, day 29, IgM (mouse)116899082672490826Mouse
36049786Ars10_mantibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049787Ars11_mantibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)116899082672490826Mouse
36049788Ars1_mantibody response to SARS-CoV 1, day 7, IgG1 (mouse)116899082672490826Mouse
36049789Ars2_mantibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)116899082672490826Mouse
36049790Ars3_mantibody response to SARS-CoV 3, day 7, IgG2b (mouse)116899082672490826Mouse
36049791Ars4_mantibody response to SARS-CoV 4, day 7, IgG3 (mouse)116899082672490826Mouse
36049792Ars5_mantibody response to SARS-CoV 5, day 7, IgM (mouse)116899082672490826Mouse
35673314Ari2_mantibody response to influenza 2, day 10, IgG3 (mouse)116899082672490826Mouse

Markers in Region
AI842396  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,688,533 - 70,688,668UniSTSGRCm38
MGSCv371170,502,035 - 70,502,170UniSTSGRCm37
Celera1178,239,472 - 78,239,607UniSTS
Cytogenetic Map11B3UniSTS
cM Map1142.0UniSTS
Whitehead/MRC_RH11907.48UniSTS
D11Die6  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,687,357 - 70,687,506UniSTSGRCm38
MGSCv371170,500,859 - 70,501,008UniSTSGRCm37
Celera1178,238,296 - 78,238,445UniSTS
Cytogenetic Map11B3UniSTS
cM Map11 UniSTS
MARC_6523-6524:992007271:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381170,670,647 - 70,671,559UniSTSGRCm38
MGSCv371170,484,149 - 70,485,061UniSTSGRCm37
Celera1178,221,580 - 78,222,492UniSTS
Cytogenetic Map11B3UniSTS
cM Map1142.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001190376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001190379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001364103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532918 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001779953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_879581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK039670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK192115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK195619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK200378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK210903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL596117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB856280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR933736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000036299   ⟹   ENSMUSP00000043792
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,289 - 70,578,779 (-)Ensembl
GRCm38.p6 Ensembl1170,669,463 - 70,687,953 (-)Ensembl
RefSeq Acc Id: ENSMUST00000100933   ⟹   ENSMUSP00000098493
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,289 - 70,578,798 (-)Ensembl
GRCm38.p6 Ensembl1170,669,463 - 70,687,972 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108544   ⟹   ENSMUSP00000104184
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,289 - 70,578,931 (-)Ensembl
GRCm38.p6 Ensembl1170,669,463 - 70,688,105 (-)Ensembl
RefSeq Acc Id: ENSMUST00000108545   ⟹   ENSMUSP00000104185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,289 - 70,578,769 (-)Ensembl
GRCm38.p6 Ensembl1170,669,463 - 70,687,943 (-)Ensembl
RefSeq Acc Id: ENSMUST00000119120   ⟹   ENSMUSP00000113847
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,290 - 70,578,781 (-)Ensembl
GRCm38.p6 Ensembl1170,669,464 - 70,687,955 (-)Ensembl
RefSeq Acc Id: ENSMUST00000120261   ⟹   ENSMUSP00000113667
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,289 - 70,578,769 (-)Ensembl
GRCm38.p6 Ensembl1170,669,463 - 70,687,943 (-)Ensembl
RefSeq Acc Id: ENSMUST00000125687
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,292 - 70,574,602 (-)Ensembl
GRCm38.p6 Ensembl1170,669,466 - 70,683,776 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145823   ⟹   ENSMUSP00000123602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,560,289 - 70,577,215 (-)Ensembl
GRCm38.p6 Ensembl1170,669,463 - 70,686,389 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150224
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1170,576,740 - 70,578,774 (-)Ensembl
GRCm38.p6 Ensembl1170,685,914 - 70,687,948 (-)Ensembl
RefSeq Acc Id: NM_001190376   ⟹   NP_001177305
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190378   ⟹   NP_001177307
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001190379   ⟹   NP_001177308
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001364103   ⟹   NP_001351032
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,356 (-)NCBI
GRCm381170,669,463 - 70,687,530 (-)NCBI
Sequence:
RefSeq Acc Id: NM_178116   ⟹   NP_835217
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,289 - 70,578,931 (-)NCBI
GRCm381170,669,463 - 70,688,105 (-)NCBI
MGSCv371170,482,968 - 70,501,436 (-)RGD
Celera1178,220,396 - 78,239,044 (-)ENTREZGENE
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532918   ⟹   XP_006532981
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,676 (-)NCBI
GRCm381170,669,466 - 70,687,853 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532919   ⟹   XP_006532982
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,966 (-)NCBI
GRCm381170,669,466 - 70,688,145 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532920   ⟹   XP_006532983
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,676 (-)NCBI
GRCm381170,669,466 - 70,687,853 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532923   ⟹   XP_006532986
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,294 - 70,578,675 (-)NCBI
GRCm381170,669,466 - 70,687,852 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006532924   ⟹   XP_006532987
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,964 (-)NCBI
GRCm381170,669,466 - 70,688,142 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245829   ⟹   XP_030101689
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,966 (-)NCBI
GRCm381170,669,466 - 70,688,145 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245830   ⟹   XP_030101690
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,962 (-)NCBI
GRCm381170,669,466 - 70,688,139 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030245831   ⟹   XP_030101691
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,962 (-)NCBI
GRCm381170,669,466 - 70,688,139 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001779953
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,288 - 70,578,676 (-)NCBI
GRCm381170,669,466 - 70,687,853 (-)NCBI
Sequence:
RefSeq Acc Id: XR_879581
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,560,292 - 70,578,687 (-)NCBI
GRCm381170,669,466 - 70,687,863 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001177305 (Get FASTA)   NCBI Sequence Viewer  
  NP_001177307 (Get FASTA)   NCBI Sequence Viewer  
  NP_001177308 (Get FASTA)   NCBI Sequence Viewer  
  NP_001351032 (Get FASTA)   NCBI Sequence Viewer  
  NP_835217 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532981 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532982 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532983 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532986 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532987 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101689 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101690 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101691 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH27039 (Get FASTA)   NCBI Sequence Viewer  
  AAH27385 (Get FASTA)   NCBI Sequence Viewer  
  AAH49133 (Get FASTA)   NCBI Sequence Viewer  
  AAH56395 (Get FASTA)   NCBI Sequence Viewer  
  BAC65682 (Get FASTA)   NCBI Sequence Viewer  
  BAE40898 (Get FASTA)   NCBI Sequence Viewer  
  EDL12603 (Get FASTA)   NCBI Sequence Viewer  
  EDL12604 (Get FASTA)   NCBI Sequence Viewer  
  EDL12605 (Get FASTA)   NCBI Sequence Viewer  
  EDL12606 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000043792
  ENSMUSP00000043792.8
  ENSMUSP00000098493.4
  ENSMUSP00000104184
  ENSMUSP00000104184.2
  ENSMUSP00000104185
  ENSMUSP00000104185.3
  ENSMUSP00000113667
  ENSMUSP00000113667.2
  ENSMUSP00000113847
  ENSMUSP00000113847.2
  ENSMUSP00000123602.2
GenBank Protein Q80Y50 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_835217   ⟸   NM_178116
- Peptide Label: isoform 1
- UniProtKB: Q8R0D9 (UniProtKB/Swiss-Prot),   Q80TP1 (UniProtKB/Swiss-Prot),   Q6PHS5 (UniProtKB/Swiss-Prot),   Q5SX68 (UniProtKB/Swiss-Prot),   Q5SX54 (UniProtKB/Swiss-Prot),   Q3TFK0 (UniProtKB/Swiss-Prot),   B0QZH5 (UniProtKB/Swiss-Prot),   Q8R2N5 (UniProtKB/Swiss-Prot),   Q80Y50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001177308   ⟸   NM_001190379
- Peptide Label: isoform 4
- UniProtKB: Q80Y50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001177307   ⟸   NM_001190378
- Peptide Label: isoform 3
- UniProtKB: B0QZH4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177305   ⟸   NM_001190376
- Peptide Label: isoform 2
- UniProtKB: Q80Y50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532987   ⟸   XM_006532924
- Peptide Label: isoform X6
- UniProtKB: B0QZH6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532986   ⟸   XM_006532923
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006532982   ⟸   XM_006532919
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006532983   ⟸   XM_006532920
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006532981   ⟸   XM_006532918
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001351032   ⟸   NM_001364103
- Peptide Label: isoform 5
RefSeq Acc Id: XP_030101689   ⟸   XM_030245829
- Peptide Label: isoform X4
RefSeq Acc Id: XP_030101691   ⟸   XM_030245831
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030101690   ⟸   XM_030245830
- Peptide Label: isoform X7
RefSeq Acc Id: ENSMUSP00000113847   ⟸   ENSMUST00000119120
RefSeq Acc Id: ENSMUSP00000104184   ⟸   ENSMUST00000108544
RefSeq Acc Id: ENSMUSP00000104185   ⟸   ENSMUST00000108545
RefSeq Acc Id: ENSMUSP00000123602   ⟸   ENSMUST00000145823
RefSeq Acc Id: ENSMUSP00000043792   ⟸   ENSMUST00000036299
RefSeq Acc Id: ENSMUSP00000113667   ⟸   ENSMUST00000120261
RefSeq Acc Id: ENSMUSP00000098493   ⟸   ENSMUST00000100933
Protein Domains
CG-1   IPT/TIG   IQ

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80Y50-F1-model_v2 AlphaFold Q80Y50 1-1208 view protein structure

Promoters
RGD ID:6820519
Promoter ID:MM_KWN:8247
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Spleen
Transcripts:OTTMUST00000013670
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,497,049 - 70,497,549 (-)MPROMDB
RGD ID:6821308
Promoter ID:MM_KWN:8248
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_4Hour
Transcripts:UC007JWB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,500,521 - 70,501,021 (-)MPROMDB
RGD ID:6820518
Promoter ID:MM_KWN:8249
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000054733,   ENSMUST00000108544,   ENSMUST00000119120,   ENSMUST00000120261,   OTTMUST00000013671,   OTTMUST00000013673,   OTTMUST00000013675,   OTTMUST00000073565
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361170,501,401 - 70,502,062 (-)MPROMDB
RGD ID:8675362
Promoter ID:EPDNEW_M15711
Type:initiation region
Name:Camta2_2
Description:Mus musculus calmodulin binding transcription activator 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15712  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381170,686,450 - 70,686,510EPDNEW
RGD ID:8675364
Promoter ID:EPDNEW_M15712
Type:initiation region
Name:Camta2_1
Description:Mus musculus calmodulin binding transcription activator 2 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15711  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381170,687,925 - 70,687,985EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2135957 AgrOrtholog
Ensembl Genes ENSMUSG00000040712 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000036299 ENTREZGENE
  ENSMUST00000036299.14 UniProtKB/Swiss-Prot
  ENSMUST00000100933.10 UniProtKB/Swiss-Prot
  ENSMUST00000108544 ENTREZGENE
  ENSMUST00000108544.8 UniProtKB/Swiss-Prot
  ENSMUST00000108545 ENTREZGENE
  ENSMUST00000108545.9 UniProtKB/Swiss-Prot
  ENSMUST00000119120 ENTREZGENE
  ENSMUST00000119120.2 UniProtKB/TrEMBL
  ENSMUST00000120261 ENTREZGENE
  ENSMUST00000120261.8 UniProtKB/TrEMBL
  ENSMUST00000125687 ENTREZGENE
  ENSMUST00000145823 ENTREZGENE
  ENSMUST00000145823.8 UniProtKB/TrEMBL
Gene3D-CATH 1.20.5.190 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ankyrin_rpt-contain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CG-1_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_E-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IPT_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IQ_motif_EF-hand-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report mmu:216874 UniProtKB/Swiss-Prot
MGD MGI:2135957 ENTREZGENE
NCBI Gene 216874 ENTREZGENE
PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23335:SF9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CG-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TIG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Camta2 PhenoGen
PROSITE ANK_REP_REGION UniProtKB/Swiss-Prot
  CG_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PS50096 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CG-1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00015 UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
  SSF81296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B0QZH4 ENTREZGENE, UniProtKB/TrEMBL
  B0QZH5 ENTREZGENE
  B0QZH6 ENTREZGENE, UniProtKB/TrEMBL
  CMTA2_MOUSE UniProtKB/Swiss-Prot
  D6RCU2_MOUSE UniProtKB/TrEMBL
  Q3TFK0 ENTREZGENE
  Q5SX54 ENTREZGENE
  Q5SX68 ENTREZGENE
  Q6PHS5 ENTREZGENE
  Q80TP1 ENTREZGENE
  Q80Y50 ENTREZGENE
  Q8R0D9 ENTREZGENE
  Q8R2N5 ENTREZGENE
UniProt Secondary B0QZH5 UniProtKB/Swiss-Prot
  Q3TFK0 UniProtKB/Swiss-Prot
  Q5SX54 UniProtKB/Swiss-Prot
  Q5SX68 UniProtKB/Swiss-Prot
  Q6PHS5 UniProtKB/Swiss-Prot
  Q80TP1 UniProtKB/Swiss-Prot
  Q8R0D9 UniProtKB/Swiss-Prot
  Q8R2N5 UniProtKB/Swiss-Prot