Slc47a1 (solute carrier family 47, member 1) - Rat Genome Database
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Gene: Slc47a1 (solute carrier family 47, member 1) Mus musculus
Analyze
Symbol: Slc47a1
Name: solute carrier family 47, member 1
RGD ID: 1322414
MGI Page MGI
Description: Is expressed in several structures, including liver; lung; metanephros; nervous system; and spleen. Orthologous to human SLC47A1 (solute carrier family 47 member 1); PARTICIPATES IN cisplatin response pathway; metformin pharmacokinetics pathway; INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1300013J15Rik; AI036982; MATE; MATE-1; MATE1; mMATE; mMATE-1; mMATE1; multidrug and toxin extrusion protein 1; riken cdna 1300013j15 gene; RP23-451A6.3; solute carrier family 47 member 1
RGD Orthologs
Human
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,234,226 - 61,269,668 (-)NCBIGRCm39mm39
GRCm39 Ensembl1161,234,227 - 61,269,171 (-)Ensembl
GRCm381161,343,400 - 61,378,842 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,343,401 - 61,378,345 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,156,902 - 61,191,577 (-)NCBIGRCm37mm9NCBIm37
MGSCv361161,159,595 - 61,194,259 (-)NCBImm8
MGSCv361161,773,092 - 61,807,757 (-)NCBImm8
Cytogenetic Map11B2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(R,R)-tramadol  (ISO)
(S)-nicotine  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-(3,4-dimethoxyphenyl)-5-\{[2-(3,4-dimethoxyphenyl)ethyl](methyl)amino\}-2-(propan-2-yl)pentanenitrile  (ISO)
2-Ethyl-1,3-hexanediol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3-[[oxo(pyridin-4-yl)methyl]hydrazo]-N-(phenylmethyl)propanamide  (ISO)
3-Amino-1-methyl-5H-pyrido[4,3-b]indole  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
aflatoxin B1  (ISO)
agmatine  (ISO)
amantadine  (ISO)
amiloride  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atropine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (ISO)
C60 fullerene  (ISO)
cadmium atom  (EXP,ISO)
caffeine  (ISO)
captan  (EXP)
chloramphenicol  (ISO)
chromium(6+)  (EXP)
cimetidine  (EXP,ISO)
cinchonidine  (ISO)
cinchonine  (ISO)
cisplatin  (EXP,ISO)
clofibrate  (EXP)
clonidine  (ISO)
clonidine (amino form)  (ISO)
clonidine (imino form)  (ISO)
copper(II) sulfate  (ISO)
creatinine  (ISO)
cyclosporin A  (ISO)
cytarabine  (ISO)
dextran sulfate  (EXP)
dioxygen  (ISO)
dipyridamole  (ISO)
dorsomorphin  (ISO)
entinostat  (ISO)
famotidine  (ISO)
folpet  (EXP)
genistein  (EXP)
Guanfacine  (ISO)
guanidine  (ISO)
hexane  (ISO)
histamine  (ISO)
imipramine  (ISO)
imiquimod  (ISO)
ketoconazole  (ISO)
mebendazole  (ISO)
medroxyprogesterone acetate  (ISO)
metformin  (EXP,ISO)
methotrexate  (ISO)
midodrine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (EXP)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (ISO)
naloxone  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
nicotine  (ISO)
NMN zwitterion  (ISO)
O-methyleugenol  (ISO)
Ondansetron  (EXP,ISO)
oxaliplatin  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP,ISO)
perfluorononanoic acid  (ISO)
phenformin  (ISO)
phentolamine  (ISO)
pirinixic acid  (EXP)
potassium dichromate  (EXP)
procainamide  (ISO)
progesterone  (ISO)
proguanil  (ISO)
propranolol  (ISO)
pyrimethamine  (ISO)
quinidine  (ISO)
quinine  (ISO)
ranitidine  (ISO)
rifampicin  (ISO)
SB 431542  (ISO)
scopolamine  (ISO)
serotonin  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
Soman  (ISO)
sulfadimethoxine  (ISO)
sulfamerazine  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tacrine  (ISO)
tetrabutylammonium  (ISO)
tetrachloromethane  (EXP)
tetraethylammonium  (ISO)
tetramethylammonium  (ISO)
tetrapentylammonium  (ISO)
tetrapropylammonium  (ISO)
ticlopidine  (ISO)
titanium dioxide  (EXP)
topiramate  (ISO)
topotecan  (ISO)
tramadol  (ISO)
triazines  (EXP)
trichlormethiazide  (ISO)
triclosan  (ISO)
trimethoprim  (ISO)
tropan-3alpha-yl 3-hydroxy-2-phenylpropanoate  (ISO)
tyramine  (ISO)
urethane  (ISO)
valproic acid  (ISO)
verapamil  (ISO)
vinclozolin  (ISO)
vitamin E  (ISO)
zafirlukast  (ISO)
zoledronic acid  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11161784   PMID:12477932   PMID:14610273   PMID:14681479   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16641166   PMID:17983590  
PMID:18573474   PMID:19332510   PMID:19521566   PMID:20016398   PMID:20813096   PMID:21267068   PMID:21677750   PMID:21873635   PMID:21991918   PMID:22242910   PMID:22722930   PMID:24001450  
PMID:24194600   PMID:24238901   PMID:25241911   PMID:25715695   PMID:26016715   PMID:27626380   PMID:30104731  


Genomics

Comparative Map Data
Slc47a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391161,234,226 - 61,269,668 (-)NCBIGRCm39mm39
GRCm39 Ensembl1161,234,227 - 61,269,171 (-)Ensembl
GRCm381161,343,400 - 61,378,842 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1161,343,401 - 61,378,345 (-)EnsemblGRCm38mm10GRCm38
MGSCv371161,156,902 - 61,191,577 (-)NCBIGRCm37mm9NCBIm37
MGSCv361161,159,595 - 61,194,259 (-)NCBImm8
MGSCv361161,773,092 - 61,807,757 (-)NCBImm8
Cytogenetic Map11B2NCBI
SLC47A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1719,495,385 - 19,579,034 (+)EnsemblGRCh38hg38GRCh38
GRCh381719,533,854 - 19,579,034 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371719,437,167 - 19,482,347 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361719,377,759 - 19,422,938 (+)NCBINCBI36hg18NCBI36
Celera1716,849,963 - 16,895,249 (+)NCBI
Cytogenetic Map17p11.2NCBI
HuRef1718,816,528 - 18,861,586 (+)NCBIHuRef
CHM1_11719,446,156 - 19,491,334 (+)NCBICHM1_1
Slc47a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21046,034,115 - 46,088,617 (-)NCBI
Rnor_6.0 Ensembl1047,632,192 - 47,666,921 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01047,631,425 - 47,685,379 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01047,405,592 - 47,440,116 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41047,514,258 - 47,548,353 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11047,526,815 - 47,561,996 (-)NCBI
Celera1045,287,837 - 45,321,882 (-)NCBICelera
Cytogenetic Map10q22NCBI
SLC47A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11736,697,753 - 36,741,618 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1736,695,965 - 36,741,618 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01731,532,821 - 31,577,523 (-)NCBIMhudiblu_PPA_v0panPan3
SLC47A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl540,642,784 - 40,679,946 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1540,643,420 - 40,679,130 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
SLC47A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,019,208 - 60,056,939 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,021,176 - 60,114,488 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC47A1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11618,124,681 - 18,168,702 (+)NCBI
ChlSab1.1 Ensembl1618,125,252 - 18,169,552 (+)Ensembl
Slc47a1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248495,775,925 - 5,831,941 (+)NCBI

Position Markers
AI036982  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381161,343,756 - 61,343,845UniSTSGRCm38
MGSCv371161,157,258 - 61,157,347UniSTSGRCm37
Cytogenetic Map11B2UniSTS
Whitehead/MRC_RH11822.97UniSTS
1300013J15Rik  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B2UniSTS
cM Map11 UniSTS
Slc47a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11330000063000000Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11890000061500000Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112827504662275149Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112867832062678320Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112881775462817873Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113111738265117382Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113220975066209867Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5417484463428696Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115417484467187585Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115419011565213015Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115936579169591873Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1228
Count of miRNA genes:596
Interacting mature miRNAs:708
Transcripts:ENSMUST00000010267, ENSMUST00000131723, ENSMUST00000147583, ENSMUST00000148671
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000010267   ⟹   ENSMUSP00000010267
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1161,343,401 - 61,378,081 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131723   ⟹   ENSMUSP00000115132
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1161,343,402 - 61,378,064 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147583
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1161,362,709 - 61,365,652 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148671   ⟹   ENSMUSP00000118265
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1161,362,886 - 61,378,345 (-)Ensembl
RefSeq Acc Id: NM_026183   ⟹   NP_080459
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,268,901 (-)NCBI
GRCm381161,343,400 - 61,378,075 (-)NCBI
MGSCv371161,156,902 - 61,191,577 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006533993   ⟹   XP_006534056
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,269,307 (-)NCBI
GRCm381161,343,400 - 61,378,481 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006533995   ⟹   XP_006534058
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,256,599 (-)NCBI
GRCm381161,343,400 - 61,365,773 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249188   ⟹   XP_011247490
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,269,668 (-)NCBI
GRCm381161,343,400 - 61,378,842 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011249189   ⟹   XP_011247491
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,257,643 (-)NCBI
GRCm381161,343,400 - 61,366,762 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036156909   ⟹   XP_036012802
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,268,890 (-)NCBI
RefSeq Acc Id: XM_036156910   ⟹   XP_036012803
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,260,119 (-)NCBI
RefSeq Acc Id: XR_003949493
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391161,234,226 - 61,269,307 (-)NCBI
GRCm381161,343,400 - 61,378,481 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_080459   ⟸   NM_026183
- UniProtKB: Q8K0H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006534056   ⟸   XM_006533993
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006534058   ⟸   XM_006533995
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011247490   ⟸   XM_011249188
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011247491   ⟸   XM_011249189
- Peptide Label: isoform X3
- UniProtKB: Q8K0H1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000115132   ⟸   ENSMUST00000131723
RefSeq Acc Id: ENSMUSP00000118265   ⟸   ENSMUST00000148671
RefSeq Acc Id: ENSMUSP00000010267   ⟸   ENSMUST00000010267
RefSeq Acc Id: XP_036012802   ⟸   XM_036156909
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036012803   ⟸   XM_036156910
- Peptide Label: isoform X4

Promoters
RGD ID:6822142
Promoter ID:MM_KWN:7770
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:OTTMUST00000012945
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361161,178,906 - 61,180,057 (-)MPROMDB
RGD ID:6822145
Promoter ID:MM_KWN:7771
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:ENSMUST00000056789,   ENSMUST00000093028,   OTTMUST00000012942,   OTTMUST00000012944
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361161,191,566 - 61,192,467 (-)MPROMDB
RGD ID:8674930
Promoter ID:EPDNEW_M15495
Type:multiple initiation site
Name:Slc47a1_1
Description:Mus musculus solute carrier family 47, member 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381161,378,064 - 61,378,124EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914723 AgrOrtholog
Ensembl Genes ENSMUSG00000010122 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000010267 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000115132 UniProtKB/TrEMBL
  ENSMUSP00000118265 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000010267 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000131723 UniProtKB/TrEMBL
  ENSMUST00000148671 UniProtKB/TrEMBL
InterPro MATE_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67473 UniProtKB/Swiss-Prot
MGD MGI:1914723 ENTREZGENE
NCBI Gene 67473 ENTREZGENE
Pfam MatE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB SLC47A1 RGD
PhenoGen Slc47a1 PhenoGen
TIGRFAMs matE UniProtKB/Swiss-Prot
UniProt D6RGQ3_MOUSE UniProtKB/TrEMBL
  F6XMB0_MOUSE UniProtKB/TrEMBL
  Q8K0H1 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q5SS45 UniProtKB/Swiss-Prot
  Q9CQ64 UniProtKB/Swiss-Prot