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Gene: COL16A1 (collagen type XVI alpha 1 chain) Homo sapiens
Symbol: COL16A1
Name: collagen type XVI alpha 1 chain
Description: Exhibits integrin binding activity. Involved in cell adhesion mediated by integrin; integrin activation; and positive regulation of focal adhesion assembly. Localizes to the collagen-containing extracellular matrix.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: 447AA; alpha 1 type XVI collagen; collagen alpha-1(XVI) chain; collagen type XVI alpha 1; collagen XVI, alpha-1 polypeptide; collagen, type XVI, alpha 1; FP1572
Mus musculus (house mouse) : Col16a1 (collagen, type XVI, alpha 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Col16a1 (collagen type XVI alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col16a1 (collagen type XVI alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL16A1 (collagen type XVI alpha 1 chain)
Canis lupus familiaris (dog) : COL16A1 (collagen type XVI alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col16a1 (collagen type XVI alpha 1 chain)
Sus scrofa (pig) : COL16A1 (collagen type XVI alpha 1 chain)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38131,652,263 - 31,704,162 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37132,117,848 - 32,169,768 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36131,890,435 - 31,942,355 (-)NCBINCBI36hg18NCBI36
Build 34131,786,940 - 31,838,742NCBI
Celera130,387,074 - 30,438,996 (-)NCBI
Cytogenetic Map1p35.2NCBI
HuRef130,235,356 - 30,287,265 (-)NCBIHuRef
CHM1_1132,233,644 - 32,285,563 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status


Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
Nomenclature History
More on COL16A1
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1322191
Created: 2005-01-12
Species: Homo sapiens
Last Modified: 2019-10-16
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.