Clasp1 (CLIP associating protein 1) - Rat Genome Database

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Gene: Clasp1 (CLIP associating protein 1) Mus musculus
Analyze
Symbol: Clasp1
Name: CLIP associating protein 1
RGD ID: 1322174
MGI Page MGI
Description: Enables microtubule binding activity. Acts upstream of or within negative regulation of microtubule depolymerization. Located in microtubule cytoskeleton. Orthologous to human CLASP1 (cytoplasmic linker associated protein 1); INTERACTS WITH 3,4-methylenedioxymethamphetamine; benzo[a]pyrene; ethanol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1700030C23Rik; 5730583A19Rik; B130045P17Rik; CL; CLA; CLASP1alpha; CLIP-associating protein 1; CLIP-associating protein CLASP1; cytoplasmic linker-associated protein 1; KIAA0622; mCL; mKIAA0622
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391118,314,976 - 118,537,192 (+)NCBIGRCm39mm39
GRCm39 Ensembl1118,316,788 - 118,540,408 (+)Ensembl
GRCm381118,389,058 - 118,609,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1118,389,058 - 118,612,678 (+)EnsemblGRCm38mm10GRCm38
MGSCv371120,285,635 - 120,506,039 (+)NCBIGRCm37mm9NCBIm37
MGSCv361120,216,604 - 120,437,008 (+)NCBImm8
Celera1121,052,069 - 121,271,357 (+)NCBICelera
Cytogenetic Map1E2.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12693553   PMID:12904583   PMID:14610273   PMID:15489334   PMID:15840001  
PMID:16141072   PMID:16141073   PMID:16452087   PMID:17967808   PMID:18448421   PMID:18799693   PMID:18854161   PMID:21822276   PMID:21873635   PMID:21937714   PMID:26514267   PMID:27073125  
PMID:27565344   PMID:28671696   PMID:28826478   PMID:30995482   PMID:32325033   PMID:32434143   PMID:32581705  


Genomics

Comparative Map Data
Clasp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391118,314,976 - 118,537,192 (+)NCBIGRCm39mm39
GRCm39 Ensembl1118,316,788 - 118,540,408 (+)Ensembl
GRCm381118,389,058 - 118,609,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1118,389,058 - 118,612,678 (+)EnsemblGRCm38mm10GRCm38
MGSCv371120,285,635 - 120,506,039 (+)NCBIGRCm37mm9NCBIm37
MGSCv361120,216,604 - 120,437,008 (+)NCBImm8
Celera1121,052,069 - 121,271,357 (+)NCBICelera
Cytogenetic Map1E2.3NCBI
CLASP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2121,337,776 - 121,649,476 (-)EnsemblGRCh38hg38GRCh38
GRCh382121,337,776 - 121,649,462 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh372122,095,352 - 122,407,038 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362121,811,825 - 122,123,522 (-)NCBINCBI36hg18NCBI36
Build 342121,811,584 - 122,123,282NCBI
Celera2115,420,003 - 115,731,696 (-)NCBI
Cytogenetic Map2q14.2-q14.3NCBI
HuRef2114,418,654 - 114,729,805 (-)NCBIHuRef
CHM1_12122,098,869 - 122,410,596 (-)NCBICHM1_1
Clasp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21329,493,554 - 29,715,151 (+)NCBImRatBN7.2
Rnor_6.0 Ensembl1334,365,147 - 34,584,651 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01334,365,038 - 34,584,651 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01339,495,368 - 39,713,144 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41331,046,104 - 31,269,294 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11331,048,529 - 31,269,668 (+)NCBI
Celera1329,397,118 - 29,618,675 (+)NCBICelera
Cytogenetic Map13q11NCBI
Clasp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554598,408,160 - 8,629,344 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554598,382,671 - 8,628,048 (+)NCBIChiLan1.0ChiLan1.0
CLASP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12B121,837,413 - 122,103,078 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B121,840,484 - 122,102,793 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02B8,265,626 - 8,574,282 (-)NCBIMhudiblu_PPA_v0panPan3
CLASP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11928,563,189 - 28,830,503 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1928,595,040 - 28,827,645 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1928,820,622 - 29,087,718 (+)NCBI
ROS_Cfam_1.01929,940,526 - 30,204,845 (+)NCBI
UMICH_Zoey_3.11928,626,435 - 28,893,769 (+)NCBI
UNSW_CanFamBas_1.01928,797,083 - 29,064,331 (+)NCBI
UU_Cfam_GSD_1.01929,977,506 - 30,244,752 (+)NCBI
Clasp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530392,282,508 - 92,550,374 (-)NCBI
SpeTri2.0NW_00493646949,067,357 - 49,335,212 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CLASP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1529,782,604 - 30,042,734 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11529,782,613 - 30,042,727 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21534,740,928 - 34,976,541 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CLASP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1108,639,245 - 8,946,935 (+)NCBI
ChlSab1.1 Ensembl108,639,196 - 8,946,968 (+)Ensembl
Vero_WHO_p1.0NW_02366606113,751,761 - 14,062,819 (-)NCBI
Clasp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473223,553,876 - 23,814,565 (+)NCBI

Position Markers
UniSTS:234190  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381118,608,628 - 118,608,885UniSTSGRCm38
MGSCv371120,505,205 - 120,505,462UniSTSGRCm37
Celera1121,270,523 - 121,270,780UniSTS
Cytogenetic Map1E2UniSTS
UniSTS:234193  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381118,607,100 - 118,607,335UniSTSGRCm38
MGSCv371120,503,677 - 120,503,912UniSTSGRCm37
Celera1121,269,023 - 121,269,258UniSTS
Cytogenetic Map1E2UniSTS
RH141775  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381118,609,089 - 118,609,263UniSTSGRCm38
MGSCv371120,505,666 - 120,505,840UniSTSGRCm37
Celera1121,270,984 - 121,271,158UniSTS
Cytogenetic Map1E2UniSTS
UniSTS:224570  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381118,553,088 - 118,553,259UniSTSGRCm38
MGSCv371120,449,665 - 120,449,836UniSTSGRCm37
Celera1121,215,122 - 121,215,293UniSTS
Cytogenetic Map1E2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134721057150318120Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134721057150318120Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134721057150318120Mouse
1357721Sle17_msystematic lupus erythematosus susceptibility 17 (mouse)Not determined139093727126517573Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
1301748Abbp1_mA/J and C57BL/6 blood pressure 1 (mouse)Not determined162907596120601949Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163880843153681816Mouse
27095918Ulnl1_mulna length 1, 5 week (mouse)167300000129800000Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173716016147249632Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74477076148839837Mouse
1357847Jckm2_mjuvenile cystic kidney modifier 2 (mouse)Not determined174952818133363199Mouse
27095931Pglq1_mpelvic girdle length QTL 1, 5 week (mouse)176000000128600000Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)176000000148900000Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
13452395Leusq2_mleucocytosis susceptibility QTL 2 (mouse)180267876126458780Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782314261147249632Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182665468135687641Mouse
12790991Aath1_maortic arch atherosclerosis 1 (mouse)186556204120556204Mouse
4141329Mleu1_mmyeloid leukemia survival 1 (mouse)Not determined89858782123858782Mouse
15039333Nmrs1_mNAFLD-associated magnetic resonance shift 1 (mouse)189858782123858782Mouse
1357760Synch3_msynechia 3 (mouse)Not determined192973712126973820Mouse
4141627Bwq7_mbody weight, QTL 7 (mouse)Not determined193013187124570059Mouse
12879491Hfnq1_mhair follicle number QTL 1 (mouse)193382588123709030Mouse
10045976Tir6_mtrypanosome infection response 6 (mouse)Not determined193609133120601949Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194200000148900000Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194200000172200000Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195600000162200000Mouse
1301123Cd8mts2_mCD8 memory T cell subset 2 (mouse)Not determined196690656130690827Mouse
1301753Tir3a_mtrypansomiasis infection response 3a (mouse)Not determined197126256131126460Mouse
13452398Leusq5_mleucocytosis susceptibility QTL 5 (mouse)198547060126458780Mouse
1301536Pbbcp1_mperipheral blood B cell percentage 1 (mouse)Not determined199579930133580115Mouse
1301193Lxw3_mlupus BXSB x NZW 3 (mouse)Not determined1103040804137040937Mouse
12879492Ecgnq1_meccrine gland number QTL 1 (mouse)1103350337120607496Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1104005680191493284Mouse
12790994Aaaq1_maortic arch angle QTL 1 (mouse)1109568206143568206Mouse
1301979Melm1_mmelanoma modifier 1 (mouse)Not determined1109710525143710742Mouse
1357600Obq17_mobesity QTL 17 (mouse)Not determined1110625442144625561Mouse
10401248Bglu12_mblood glucose level 12 (mouse)Not determined1110625442144625561Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112081092168358833Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112081092175641372Mouse
1301249Sbw1_msplenomegaly-NZB x NZW 1 (mouse)Not determined1112203268146203348Mouse
10045640Jckm4_mjuvenile cystic kidney modifier 4 (mouse)Not determined1116363098150363199Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117600000180000000Mouse
1302161Exq2_mexploratory and excitability QTL 2 (mouse)Not determined1118171982152172078Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:5162
Count of miRNA genes:673
Interacting mature miRNAs:859
Transcripts:ENSMUST00000049404, ENSMUST00000070989, ENSMUST00000165223, ENSMUST00000178710
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001293300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001293301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359329 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359347 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011248108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC109294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC131804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC136636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ276962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ288061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK006534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK164264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC039216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC157938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC158064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU703855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF538190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK640085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CV557069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000049404   ⟹   ENSMUSP00000042266
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,058 - 118,609,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000070989   ⟹   ENSMUSP00000067858
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,058 - 118,609,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000165223   ⟹   ENSMUSP00000128089
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,455 - 118,609,491 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178710   ⟹   ENSMUSP00000137137
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,058 - 118,609,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000185405   ⟹   ENSMUSP00000139619
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,419,724 - 118,607,112 (+)Ensembl
RefSeq Acc Id: ENSMUST00000186349   ⟹   ENSMUSP00000141105
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,419,560 - 118,609,500 (+)Ensembl
RefSeq Acc Id: ENSMUST00000187575
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,604,727 - 118,609,432 (+)Ensembl
RefSeq Acc Id: ENSMUST00000187713   ⟹   ENSMUSP00000139526
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,455 - 118,607,582 (+)Ensembl
RefSeq Acc Id: ENSMUST00000188441
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,547,211 - 118,547,930 (+)Ensembl
RefSeq Acc Id: ENSMUST00000188710   ⟹   ENSMUSP00000140593
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,419,724 - 118,612,678 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189216
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,510,237 - 118,525,873 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189262   ⟹   ENSMUSP00000140860
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,517 - 118,609,240 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189384
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,534,766 - 118,537,490 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189570   ⟹   ENSMUSP00000140167
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,456 - 118,607,739 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189676
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,344 - 118,503,213 (+)Ensembl
RefSeq Acc Id: ENSMUST00000189738   ⟹   ENSMUSP00000140665
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,455 - 118,607,582 (+)Ensembl
RefSeq Acc Id: ENSMUST00000190135
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,457 - 118,507,576 (+)Ensembl
RefSeq Acc Id: ENSMUST00000190571   ⟹   ENSMUSP00000140019
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,058 - 118,609,497 (+)Ensembl
RefSeq Acc Id: ENSMUST00000190733   ⟹   ENSMUSP00000140778
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,446 - 118,607,165 (+)Ensembl
RefSeq Acc Id: ENSMUST00000191445   ⟹   ENSMUSP00000140095
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,389,473 - 118,607,165 (+)Ensembl
RefSeq Acc Id: ENSMUST00000191823   ⟹   ENSMUSP00000142203
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,482,039 - 118,607,137 (+)Ensembl
RefSeq Acc Id: ENSMUST00000192387   ⟹   ENSMUSP00000141582
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,547,977 - 118,581,283 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203009
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,459,588 - 118,497,763 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203646
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,469,771 - 118,607,099 (+)Ensembl
RefSeq Acc Id: ENSMUST00000203870
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,554,234 - 118,556,323 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204325   ⟹   ENSMUSP00000144798
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,532,079 - 118,609,457 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204552
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,470,587 - 118,501,386 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204886
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,469,826 - 118,503,896 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204904   ⟹   ENSMUSP00000145100
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,471,772 - 118,504,956 (+)Ensembl
RefSeq Acc Id: ENSMUST00000205176   ⟹   ENSMUSP00000144818
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1118,512,717 - 118,547,911 (+)Ensembl
RefSeq Acc Id: NM_001293300   ⟹   NP_001280229
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Celera1121,052,069 - 121,271,357 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001293301   ⟹   NP_001280230
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Celera1121,052,069 - 121,271,357 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359328   ⟹   NP_001346257
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359329   ⟹   NP_001346258
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359330   ⟹   NP_001346259
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359331   ⟹   NP_001346260
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359334   ⟹   NP_001346263
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359335   ⟹   NP_001346264
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359336   ⟹   NP_001346265
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359337   ⟹   NP_001346266
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359338   ⟹   NP_001346267
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359339   ⟹   NP_001346268
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359340   ⟹   NP_001346269
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359341   ⟹   NP_001346270
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359342   ⟹   NP_001346271
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359343   ⟹   NP_001346272
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359345   ⟹   NP_001346274
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359346   ⟹   NP_001346275
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359347   ⟹   NP_001346276
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: NM_029709   ⟹   NP_083985
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,316,788 - 118,537,192 (+)NCBI
GRCm381118,389,058 - 118,609,462 (+)NCBI
MGSCv371120,285,635 - 120,506,039 (+)RGD
Celera1121,052,069 - 121,271,357 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529920   ⟹   XP_006529983
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529922   ⟹   XP_006529985
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529924   ⟹   XP_006529987
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529929   ⟹   XP_006529992
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529937   ⟹   XP_006530000
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529938   ⟹   XP_006530001
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529939   ⟹   XP_006530002
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529948   ⟹   XP_006530011
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011248107   ⟹   XP_011246409
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011248108   ⟹   XP_011246410
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243449   ⟹   XP_030099309
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243458   ⟹   XP_030099318
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243461   ⟹   XP_030099321
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243482   ⟹   XP_030099342
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243485   ⟹   XP_030099345
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
GRCm381118,389,063 - 118,609,462 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036154255   ⟹   XP_036010148
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154259   ⟹   XP_036010152
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154261   ⟹   XP_036010154
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154262   ⟹   XP_036010155
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154263   ⟹   XP_036010156
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154271   ⟹   XP_036010164
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154272   ⟹   XP_036010165
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154274   ⟹   XP_036010167
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154275   ⟹   XP_036010168
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154278   ⟹   XP_036010171
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154280   ⟹   XP_036010173
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154284   ⟹   XP_036010177
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154286   ⟹   XP_036010179
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154288   ⟹   XP_036010181
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
RefSeq Acc Id: XM_036154292   ⟹   XP_036010185
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391118,314,976 - 118,537,192 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001280229 (Get FASTA)   NCBI Sequence Viewer  
  NP_001280230 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346257 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346258 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346259 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346260 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346263 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346264 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346265 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346266 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346267 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346268 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346269 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346270 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346271 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346272 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346274 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346275 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346276 (Get FASTA)   NCBI Sequence Viewer  
  NP_083985 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529983 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529985 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529987 (Get FASTA)   NCBI Sequence Viewer  
  XP_006529992 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530000 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530001 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530002 (Get FASTA)   NCBI Sequence Viewer  
  XP_006530011 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246409 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246410 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099309 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099318 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099321 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099342 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099345 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010148 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010152 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010154 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010155 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010156 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010164 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010165 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010167 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010168 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010171 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010173 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010177 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010179 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010181 (Get FASTA)   NCBI Sequence Viewer  
  XP_036010185 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH57312 (Get FASTA)   NCBI Sequence Viewer  
  AAH75708 (Get FASTA)   NCBI Sequence Viewer  
  AAH94432 (Get FASTA)   NCBI Sequence Viewer  
  AAH94554 (Get FASTA)   NCBI Sequence Viewer  
  AAI58065 (Get FASTA)   NCBI Sequence Viewer  
  BAB24639 (Get FASTA)   NCBI Sequence Viewer  
  BAC38020 (Get FASTA)   NCBI Sequence Viewer  
  BAC65612 (Get FASTA)   NCBI Sequence Viewer  
  BAE37710 (Get FASTA)   NCBI Sequence Viewer  
  CAC35162 (Get FASTA)   NCBI Sequence Viewer  
  CAC35163 (Get FASTA)   NCBI Sequence Viewer  
  Q80TV8 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_083985   ⟸   NM_029709
- Peptide Label: isoform 3
- UniProtKB: Q80TV8 (UniProtKB/Swiss-Prot),   A5D6Q8 (UniProtKB/TrEMBL),   A0A087WS18 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529983   ⟸   XM_006529920
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006529992   ⟸   XM_006529929
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006530000   ⟸   XM_006529937
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006529985   ⟸   XM_006529922
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006530001   ⟸   XM_006529938
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_006529987   ⟸   XM_006529924
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006530002   ⟸   XM_006529939
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_006530011   ⟸   XM_006529948
- Peptide Label: isoform X30
- Sequence:
RefSeq Acc Id: NP_001280229   ⟸   NM_001293300
- Peptide Label: isoform 4
- UniProtKB: Q80TV8 (UniProtKB/Swiss-Prot),   A0A087WQ31 (UniProtKB/TrEMBL),   A5D6Q8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001280230   ⟸   NM_001293301
- Peptide Label: isoform 5
- UniProtKB: Q80TV8 (UniProtKB/Swiss-Prot),   A5D6Q8 (UniProtKB/TrEMBL),   E9Q6L0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011246410   ⟸   XM_011248108
- Peptide Label: isoform X22
- UniProtKB: A0A087WQF1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011246409   ⟸   XM_011248107
- Peptide Label: isoform X13
- UniProtKB: E9QKH0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001346257   ⟸   NM_001359328
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001346260   ⟸   NM_001359331
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001346264   ⟸   NM_001359335
- Peptide Label: isoform 11
RefSeq Acc Id: NP_001346266   ⟸   NM_001359337
- Peptide Label: isoform 13
RefSeq Acc Id: NP_001346265   ⟸   NM_001359336
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001346274   ⟸   NM_001359345
- Peptide Label: isoform 20
RefSeq Acc Id: NP_001346258   ⟸   NM_001359329
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001346263   ⟸   NM_001359334
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001346259   ⟸   NM_001359330
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001346268   ⟸   NM_001359339
- Peptide Label: isoform 15
RefSeq Acc Id: NP_001346270   ⟸   NM_001359341
- Peptide Label: isoform 17
RefSeq Acc Id: NP_001346272   ⟸   NM_001359343
- Peptide Label: isoform 19
RefSeq Acc Id: NP_001346267   ⟸   NM_001359338
- Peptide Label: isoform 14
RefSeq Acc Id: NP_001346275   ⟸   NM_001359346
- Peptide Label: isoform 21
RefSeq Acc Id: NP_001346269   ⟸   NM_001359340
- Peptide Label: isoform 16
RefSeq Acc Id: NP_001346271   ⟸   NM_001359342
- Peptide Label: isoform 18
RefSeq Acc Id: NP_001346276   ⟸   NM_001359347
- Peptide Label: isoform 22
RefSeq Acc Id: XP_030099318   ⟸   XM_030243458
- Peptide Label: isoform X15
RefSeq Acc Id: XP_030099309   ⟸   XM_030243449
- Peptide Label: isoform X10
RefSeq Acc Id: XP_030099345   ⟸   XM_030243485
- Peptide Label: isoform X29
RefSeq Acc Id: XP_030099342   ⟸   XM_030243482
- Peptide Label: isoform X27
RefSeq Acc Id: XP_030099321   ⟸   XM_030243461
- Peptide Label: isoform X16
RefSeq Acc Id: ENSMUSP00000144798   ⟸   ENSMUST00000204325
RefSeq Acc Id: ENSMUSP00000137137   ⟸   ENSMUST00000178710
RefSeq Acc Id: ENSMUSP00000067858   ⟸   ENSMUST00000070989
RefSeq Acc Id: ENSMUSP00000141105   ⟸   ENSMUST00000186349
RefSeq Acc Id: ENSMUSP00000042266   ⟸   ENSMUST00000049404
RefSeq Acc Id: ENSMUSP00000140095   ⟸   ENSMUST00000191445
RefSeq Acc Id: ENSMUSP00000142203   ⟸   ENSMUST00000191823
RefSeq Acc Id: ENSMUSP00000139619   ⟸   ENSMUST00000185405
RefSeq Acc Id: ENSMUSP00000144818   ⟸   ENSMUST00000205176
RefSeq Acc Id: ENSMUSP00000145100   ⟸   ENSMUST00000204904
RefSeq Acc Id: ENSMUSP00000140778   ⟸   ENSMUST00000190733
RefSeq Acc Id: ENSMUSP00000128089   ⟸   ENSMUST00000165223
RefSeq Acc Id: ENSMUSP00000140019   ⟸   ENSMUST00000190571
RefSeq Acc Id: ENSMUSP00000140593   ⟸   ENSMUST00000188710
RefSeq Acc Id: ENSMUSP00000139526   ⟸   ENSMUST00000187713
RefSeq Acc Id: ENSMUSP00000141582   ⟸   ENSMUST00000192387
RefSeq Acc Id: ENSMUSP00000140665   ⟸   ENSMUST00000189738
RefSeq Acc Id: ENSMUSP00000140860   ⟸   ENSMUST00000189262
RefSeq Acc Id: ENSMUSP00000140167   ⟸   ENSMUST00000189570
RefSeq Acc Id: XP_036010154   ⟸   XM_036154261
- Peptide Label: isoform X7
RefSeq Acc Id: XP_036010152   ⟸   XM_036154259
- Peptide Label: isoform X6
RefSeq Acc Id: XP_036010148   ⟸   XM_036154255
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036010155   ⟸   XM_036154262
- Peptide Label: isoform X8
RefSeq Acc Id: XP_036010156   ⟸   XM_036154263
- Peptide Label: isoform X9
RefSeq Acc Id: XP_036010171   ⟸   XM_036154278
- Peptide Label: isoform X21
RefSeq Acc Id: XP_036010177   ⟸   XM_036154284
- Peptide Label: isoform X24
RefSeq Acc Id: XP_036010173   ⟸   XM_036154280
- Peptide Label: isoform X23
RefSeq Acc Id: XP_036010164   ⟸   XM_036154271
- Peptide Label: isoform X17
RefSeq Acc Id: XP_036010165   ⟸   XM_036154272
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036010185   ⟸   XM_036154292
- Peptide Label: isoform X28
RefSeq Acc Id: XP_036010167   ⟸   XM_036154274
- Peptide Label: isoform X19
RefSeq Acc Id: XP_036010168   ⟸   XM_036154275
- Peptide Label: isoform X20
RefSeq Acc Id: XP_036010179   ⟸   XM_036154286
- Peptide Label: isoform X25
RefSeq Acc Id: XP_036010181   ⟸   XM_036154288
- Peptide Label: isoform X26
Protein Domains
TOG

Promoters
RGD ID:6874696
Promoter ID:EPDNEW_M799
Type:initiation region
Name:Clasp1_1
Description:Mus musculus CLIP associating protein 1 , transcript variant5, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381118,389,431 - 118,389,491EPDNEW
RGD ID:6817515
Promoter ID:MM_KWN:1864
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000049404,   ENSMUST00000070989,   NM_001081276,   NM_029709,   NM_177548,   UC007CID.1,   UC007CIE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361120,284,786 - 120,286,112 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1923957 AgrOrtholog
Ensembl Genes ENSMUSG00000064302 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000042266 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000067858 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000128089 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000137137 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000139526 UniProtKB/TrEMBL
  ENSMUSP00000139619 UniProtKB/TrEMBL
  ENSMUSP00000140019 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000140095 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000140167 UniProtKB/TrEMBL
  ENSMUSP00000140593 UniProtKB/TrEMBL
  ENSMUSP00000140665 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000140778 UniProtKB/TrEMBL
  ENSMUSP00000140860 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000141105 UniProtKB/TrEMBL
  ENSMUSP00000141582 UniProtKB/TrEMBL
  ENSMUSP00000142203 UniProtKB/TrEMBL
  ENSMUSP00000144818 UniProtKB/TrEMBL
  ENSMUSP00000145100 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000049404 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000070989 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000165223 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000178710 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000185405 UniProtKB/TrEMBL
  ENSMUST00000186349 UniProtKB/TrEMBL
  ENSMUST00000187713 UniProtKB/TrEMBL
  ENSMUST00000188710 UniProtKB/TrEMBL
  ENSMUST00000189262 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000189570 UniProtKB/TrEMBL
  ENSMUST00000189738 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000190571 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000190733 UniProtKB/TrEMBL
  ENSMUST00000191445 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000191823 UniProtKB/TrEMBL
  ENSMUST00000192387 UniProtKB/TrEMBL
  ENSMUST00000204904 UniProtKB/TrEMBL
  ENSMUST00000205176 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CLASP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CLASP_N_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HEAT_type_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TOG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:76707 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1923957 ENTREZGENE
NCBI Gene 76707 ENTREZGENE
PANTHER PTHR21567:SF28 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CLASP_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Clasp1 PhenoGen
PROSITE HEAT_REPEAT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART TOG UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WNW8_MOUSE UniProtKB/TrEMBL
  A0A087WP42_MOUSE UniProtKB/TrEMBL
  A0A087WQ31 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WQ95_MOUSE UniProtKB/TrEMBL
  A0A087WQF1 ENTREZGENE, UniProtKB/TrEMBL
  A0A087WRE8_MOUSE UniProtKB/TrEMBL
  A0A087WRK0_MOUSE UniProtKB/TrEMBL
  A0A087WRU7_MOUSE UniProtKB/TrEMBL
  A0A087WS18 ENTREZGENE, UniProtKB/TrEMBL
  A0A0A6YWK1_MOUSE UniProtKB/TrEMBL
  A0A0A6YXZ1_MOUSE UniProtKB/TrEMBL
  A0A0N4SUT7_MOUSE UniProtKB/TrEMBL
  A0A0N4SVH2_MOUSE UniProtKB/TrEMBL
  A5D6Q8 ENTREZGENE, UniProtKB/TrEMBL
  B2RY22_MOUSE UniProtKB/TrEMBL
  CLAP1_MOUSE UniProtKB/Swiss-Prot
  E9Q6L0 ENTREZGENE, UniProtKB/TrEMBL
  E9QKH0 ENTREZGENE, UniProtKB/TrEMBL
  E9QNY9_MOUSE UniProtKB/TrEMBL
  J3QP81_MOUSE UniProtKB/TrEMBL
  Q3TPM6_MOUSE UniProtKB/TrEMBL
  Q80TV8 ENTREZGENE
UniProt Secondary Q505G6 UniProtKB/Swiss-Prot
  Q6DI75 UniProtKB/Swiss-Prot
  Q6PG14 UniProtKB/Swiss-Prot
  Q8BNS4 UniProtKB/Swiss-Prot
  Q99JH5 UniProtKB/Swiss-Prot
  Q99JI2 UniProtKB/Swiss-Prot
  Q9CVU1 UniProtKB/Swiss-Prot